>ref|XM_493929.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2940

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 172 tgtggaaaatgttggtgttgagaagcctacagaggttgagagt 214
           |||||| | ||||||||||||||||||||| |||| |||||||
Sbjct: 84  tgtggagattgttggtgttgagaagcctactgaggatgagagt 126

>gb|AC084218.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0001A07,
              complete sequence
          Length = 164898

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                         
Query: 172    tgtggaaaatgttggtgttgagaagcctacagaggttgagagt 214
              |||||| | ||||||||||||||||||||| |||| |||||||
Sbjct: 110985 tgtggagattgttggtgttgagaagcctactgaggatgagagt 110943

>gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0072C16, complete sequence
          Length = 159525

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                        
Query: 172   tgtggaaaatgttggtgttgagaagcctacagaggttgagagt 214
             |||||| | ||||||||||||||||||||| |||| |||||||
Sbjct: 10390 tgtggagattgttggtgttgagaagcctactgaggatgagagt 10348

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                          
Query: 172     tgtggaaaatgttggtgttgagaagcctacagaggttgagagt 214
               |||||| | ||||||||||||||||||||| |||| |||||||
Sbjct: 2916374 tgtggagattgttggtgttgagaagcctactgaggatgagagt 2916332

>dbj|AK102924.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114D01, full
            insert sequence
          Length = 4269

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                       
Query: 172  tgtggaaaatgttggtgttgagaagcctacagaggttgagagt 214
            |||||| | ||||||||||||||||||||| |||| |||||||
Sbjct: 1193 tgtggagattgttggtgttgagaagcctactgaggatgagagt 1235

>dbj|AK065647.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013038D10, full
           insert sequence
          Length = 3790

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 172 tgtggaaaatgttggtgttgagaagcctacagaggttgagagt 214
           |||||| | ||||||||||||||||||||| |||| |||||||
Sbjct: 711 tgtggagattgttggtgttgagaagcctactgaggatgagagt 753

>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 215   gttgttgctggtggcgatgatg 236
             ||||||||||||||||||||||
Sbjct: 37649 gttgttgctggtggcgatgatg 37628

>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 215     gttgttgctggtggcgatgat 235
               |||||||||||||||||||||
Sbjct: 3668148 gttgttgctggtggcgatgat 3668128

>gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome
          Length = 1838554

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 201     cagaggttgagagtgttgttgctg 224
               |||||||||||||| |||||||||
Sbjct: 1546379 cagaggttgagagttttgttgctg 1546356

>gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome
          Length = 1899877

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 201     cagaggttgagagtgttgttgctg 224
               |||||||||||||| |||||||||
Sbjct: 1598513 cagaggttgagagttttgttgctg 1598490

>gb|AE006612.1| Streptococcus pyogenes M1 GAS, section 141 of 167 of the complete
            genome
          Length = 11389

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 201  cagaggttgagagtgttgttgctg 224
            |||||||||||||| |||||||||
Sbjct: 6215 cagaggttgagagttttgttgctg 6192

>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome
          Length = 5064019

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 91      tccttcaagcgcagacattc 110
               ||||||||||||||||||||
Sbjct: 2640760 tccttcaagcgcagacattc 2640779

>gb|AE010098.1| Streptococcus pyogenes strain MGAS8232, section 146 of 173 of the
             complete genome
          Length = 12214

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 201   cagaggttgagagtgttgttgctg 224
             |||||||||||||| |||||||||
Sbjct: 10864 cagaggttgagagttttgttgctg 10841

>gb|AY833015.1| Plasmodium vivax strain Thailand K2 merozoite surface protein 3 alpha
            (MSP3a) gene, complete cds
          Length = 2571

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 127  tgagaaggcacaaaatgcag 146
            ||||||||||||||||||||
Sbjct: 1737 tgagaaggcacaaaatgcag 1756

>gb|AC128031.4| Rattus norvegicus  BAC CH230-418E23 (Children's Hospital Oakland
            Research Institute Rat (BN/SsNHsd/MCW) BAC library)
            complete sequence
          Length = 176784

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 164  agtggaagtgtggaaaatgttggt 187
            |||||||||||||| |||||||||
Sbjct: 8997 agtggaagtgtggacaatgttggt 8974


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,166,412
Number of Sequences: 3902068
Number of extensions: 2166412
Number of successful extensions: 43998
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43922
Number of HSP's gapped (non-prelim): 76
length of query: 238
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 216
effective length of database: 17,147,199,772
effective search space: 3703795150752
effective search space used: 3703795150752
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)