ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl26g01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_183780.1| Oryza sativa (japonica cultivar-group), predic... 107 2e-20
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 107 2e-20
3dbj|AP002953.2| Oryza sativa (japonica cultivar-group) genomic D... 107 2e-20
4dbj|AK070488.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 2e-20
5gb|AY633542.1| Mesotaenium caldariorum cellulose synthase cataly... 46 0.078
6ref|XM_386585.1| Gibberella zeae PH-1 chromosome 3 hypothetical ... 44 0.31
7ref|XM_422068.1| PREDICTED: Gallus gallus similar to myofibrillo... 42 1.2
8ref|XM_960839.1| Encephalitozoon cuniculi GB-M1 ribosome recycli... 42 1.2
9gb|AC137901.7| Mus musculus chromosome 6, clone RP23-81E17, comp... 42 1.2
10ref|XM_981595.1| PREDICTED: Mus musculus hypothetical LOC623673 ... 42 1.2
11ref|XM_897914.2| PREDICTED: Mus musculus hypothetical LOC623673 ... 42 1.2
12gb|BC099822.1| Rattus norvegicus v-raf murine sarcoma 3611 viral... 42 1.2
13gb|AC164563.4| Mus musculus BAC clone RP23-130D15 from chromosom... 42 1.2
14emb|AL391737.2|CNS06C8G chromosome I of strain GB-M1 of Encephal... 42 1.2
15emb|AJ851802.1| Gallus gallus mRNA for hypothetical protein, clo... 42 1.2
16emb|AJ719681.1| Gallus gallus mRNA for hypothetical protein, clo... 42 1.2
17dbj|AK143972.1| Mus musculus adult male kidney cDNA, RIKEN full-... 42 1.2
18dbj|AK141241.1| Mus musculus ES cells cDNA, RIKEN full-length en... 42 1.2
19dbj|AK171220.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 42 1.2
20emb|CR523531.1| Gallus gallus finished cDNA, clone ChEST526c4 42 1.2
21emb|CR391728.1| Gallus gallus finished cDNA, clone ChEST216a12 42 1.2
22gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR c... 42 1.2
23gb|AC142254.4| Mus musculus BAC clone RP24-545G7 from 6, complet... 42 1.2
24emb|CR974477.12| Pig DNA sequence from clone CH242-217L7 on chro... 42 1.2
25ref|NM_001034456.1| Bos taurus similar to Myeloid leukemia facto... 40 4.8
26ref|XM_847355.1| PREDICTED: Canis familiaris similar to Transcri... 40 4.8
27ref|XM_860621.1| PREDICTED: Canis familiaris similar to Transcri... 40 4.8
28ref|XM_860606.1| PREDICTED: Canis familiaris similar to Transcri... 40 4.8
29ref|XM_860591.1| PREDICTED: Canis familiaris similar to Transcri... 40 4.8
30ref|XM_860575.1| PREDICTED: Canis familiaris similar to Transcri... 40 4.8
31ref|XM_860558.1| PREDICTED: Canis familiaris similar to Transcri... 40 4.8
32gb|AC123519.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.8
33emb|AL132775.29|HSDJ46C2 Human DNA sequence from clone RP1-46C2 ... 40 4.8
34gb|AF547386.1| Homo sapiens E2F transcription factor 3 (E2F3) ge... 40 4.8
35gb|AC069021.9| Homo sapiens chromosome 10 clone RP11-254K3, comp... 40 4.8
36emb|BX842652.1| Bdellovibrio bacteriovorus complete genome, stra... 40 4.8
37emb|BX572608.1| Rhodopseudomonas palustris CGA009 complete genom... 40 4.8
38emb|AL162758.2|NMA7Z2491 Neisseria meningitidis serogroup A stra... 40 4.8
39emb|AJ748332.1| Heliothis virescens mRNA for putative chemosenso... 40 4.8
40dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 4.8
41gb|AC151294.3| Mus musculus BAC clone RP23-137I7 from chromosome... 40 4.8
42gb|BC104523.1| Bos taurus similar to Myeloid leukemia factor 2 (... 40 4.8
43gb|AE002098.2| Neisseria meningitidis MC58, complete genome 40 4.8
44dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
45dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
46dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
47gb|AC093124.3| Papio anubis clone RP41-216E17, complete sequence 40 4.8
48dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
49dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
50dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
51gb|AY037858.1| Cercopithicine herpesvirus 15 strain LCL8664, com... 40 4.8
52dbj|AK101828.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.8
53gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome 40 4.8
54gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 4.8
55gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.8
56gb|AC132481.4| Mus musculus BAC clone RP23-14I14 from 17, comple... 40 4.8 
>ref|NM_183780.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2598

 Score =  107 bits (54), Expect = 2e-20
 Identities = 75/82 (91%)
 Strand = Plus / Plus

                                                                       
Query: 195 gcgcacttcagcacgccaccgggcccgcccgtcttctcctcgccgctgcgccccgccgcc 254
           ||||| ||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| 
Sbjct: 154 gcgcagttcagcacgccgccgggcccgccggtcttctcctccccgctgcgccccgccgcg 213

                                 
Query: 255 gtgccattccgcaccaccccgg 276
           ||||| |||||| |||||||||
Sbjct: 214 gtgcccttccgcgccaccccgg 235
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  107 bits (54), Expect = 2e-20
 Identities = 75/82 (91%)
 Strand = Plus / Minus

                                                                            
Query: 195      gcgcacttcagcacgccaccgggcccgcccgtcttctcctcgccgctgcgccccgccgcc 254
                ||||| ||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| 
Sbjct: 12245657 gcgcagttcagcacgccgccgggcccgccggtcttctcctccccgctgcgccccgccgcg 12245598

                                      
Query: 255      gtgccattccgcaccaccccgg 276
                ||||| |||||| |||||||||
Sbjct: 12245597 gtgcccttccgcgccaccccgg 12245576
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>dbj|AP002953.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0426D06
          Length = 162173

 Score =  107 bits (54), Expect = 2e-20
 Identities = 75/82 (91%)
 Strand = Plus / Minus

                                                                         
Query: 195   gcgcacttcagcacgccaccgggcccgcccgtcttctcctcgccgctgcgccccgccgcc 254
             ||||| ||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| 
Sbjct: 70283 gcgcagttcagcacgccgccgggcccgccggtcttctcctccccgctgcgccccgccgcg 70224

                                   
Query: 255   gtgccattccgcaccaccccgg 276
             ||||| |||||| |||||||||
Sbjct: 70223 gtgcccttccgcgccaccccgg 70202
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>dbj|AK070488.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049C21, full
           insert sequence
          Length = 3487

 Score =  107 bits (54), Expect = 2e-20
 Identities = 75/82 (91%)
 Strand = Plus / Plus

                                                                       
Query: 195 gcgcacttcagcacgccaccgggcccgcccgtcttctcctcgccgctgcgccccgccgcc 254
           ||||| ||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| 
Sbjct: 271 gcgcagttcagcacgccgccgggcccgccggtcttctcctccccgctgcgccccgccgcg 330

                                 
Query: 255 gtgccattccgcaccaccccgg 276
           ||||| |||||| |||||||||
Sbjct: 331 gtgcccttccgcgccaccccgg 352
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>gb|AY633542.1| Mesotaenium caldariorum cellulose synthase catalytic subunit (CesA2)
            gene, complete cds
          Length = 6362

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 309  accgcctcctcatcgtcctccgtctcc 335
            |||||||||||||||||||||| ||||
Sbjct: 2155 accgcctcctcatcgtcctccgcctcc 2181
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>ref|XM_386585.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG06409.1)
            partial mRNA
          Length = 1176

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 299  cgcctcccgcaccgcctcctcatcgtcctc 328
            |||||||  |||||||||||||||||||||
Sbjct: 1056 cgcctccttcaccgcctcctcatcgtcctc 1027
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>ref|XM_422068.1| PREDICTED: Gallus gallus similar to myofibrillogenesis regulator
           MR-1 (LOC424219), mRNA
          Length = 915

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 316 cctcatcgtcctccgtctccc 336
           |||||||||||||||||||||
Sbjct: 17  cctcatcgtcctccgtctccc 37
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>ref|XM_960839.1| Encephalitozoon cuniculi GB-M1 ribosome recycling factor
           (ECU01_0960) partial mRNA
          Length = 594

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 308 caccgcctcctcatcgtcctc 328
           |||||||||||||||||||||
Sbjct: 36  caccgcctcctcatcgtcctc 16
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>gb|AC137901.7| Mus musculus chromosome 6, clone RP23-81E17, complete sequence
          Length = 158419

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 298   tcgcctcccgcaccgcctcct 318
             |||||||||||||||||||||
Sbjct: 18686 tcgcctcccgcaccgcctcct 18706
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>ref|XM_981595.1| PREDICTED: Mus musculus hypothetical LOC623673 (LOC623673), mRNA
          Length = 654

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 298 tcgcctcccgcaccgcctcct 318
           |||||||||||||||||||||
Sbjct: 432 tcgcctcccgcaccgcctcct 452
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>ref|XM_897914.2| PREDICTED: Mus musculus hypothetical LOC623673 (LOC623673), mRNA
          Length = 654

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 298 tcgcctcccgcaccgcctcct 318
           |||||||||||||||||||||
Sbjct: 432 tcgcctcccgcaccgcctcct 452
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>gb|BC099822.1| Rattus norvegicus v-raf murine sarcoma 3611 viral oncogene homolog,
            mRNA (cDNA clone MGC:124609 IMAGE:7930982), complete cds
          Length = 3820

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 298  tcgcctcccgcaccgcctcct 318
            |||||||||||||||||||||
Sbjct: 2322 tcgcctcccgcaccgcctcct 2302
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>gb|AC164563.4| Mus musculus BAC clone RP23-130D15 from chromosome 6, complete sequence
          Length = 202948

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 298    tcgcctcccgcaccgcctcct 318
              |||||||||||||||||||||
Sbjct: 107742 tcgcctcccgcaccgcctcct 107722
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>emb|AL391737.2|CNS06C8G chromosome I of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 209982

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 308    caccgcctcctcatcgtcctc 328
              |||||||||||||||||||||
Sbjct: 110096 caccgcctcctcatcgtcctc 110116
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>emb|AJ851802.1| Gallus gallus mRNA for hypothetical protein, clone 34k10
          Length = 2762

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 305 ccgcaccgcctcctcatcgtcctcc 329
           ||||||||||||||| |||||||||
Sbjct: 486 ccgcaccgcctcctcctcgtcctcc 462
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>emb|AJ719681.1| Gallus gallus mRNA for hypothetical protein, clone 5e2
          Length = 2507

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 316 cctcatcgtcctccgtctccc 336
           |||||||||||||||||||||
Sbjct: 224 cctcatcgtcctccgtctccc 204
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>dbj|AK143972.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched
           library, clone:F530010A04 product:myeloid leukemia
           factor 2, full insert sequence
          Length = 1478

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 298 tcgcctcccgcaccgcctcct 318
           |||||||||||||||||||||
Sbjct: 49  tcgcctcccgcaccgcctcct 29
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>dbj|AK141241.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library,
           clone:C330035N03 product:myeloid leukemia factor 2, full
           insert sequence
          Length = 1468

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 298 tcgcctcccgcaccgcctcct 318
           |||||||||||||||||||||
Sbjct: 48  tcgcctcccgcaccgcctcct 28
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>dbj|AK171220.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630310D06
           product:myeloid leukemia factor 2, full insert sequence
          Length = 3489

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 298 tcgcctcccgcaccgcctcct 318
           |||||||||||||||||||||
Sbjct: 95  tcgcctcccgcaccgcctcct 75
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>emb|CR523531.1| Gallus gallus finished cDNA, clone ChEST526c4
          Length = 1502

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 316 cctcatcgtcctccgtctccc 336
           |||||||||||||||||||||
Sbjct: 213 cctcatcgtcctccgtctccc 193
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>emb|CR391728.1| Gallus gallus finished cDNA, clone ChEST216a12
          Length = 685

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 305 ccgcaccgcctcctcatcgtcctcc 329
           ||||||||||||||| |||||||||
Sbjct: 200 ccgcaccgcctcctcctcgtcctcc 176
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>gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR class RGA, HCBT-like
              putative defense response protein, and putative alliin
              lyase genes, complete cds; and unknown genes
          Length = 106618

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 235    cgccgctgcgccccgccgccg 255
              |||||||||||||||||||||
Sbjct: 102087 cgccgctgcgccccgccgccg 102067
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>gb|AC142254.4| Mus musculus BAC clone RP24-545G7 from 6, complete sequence
          Length = 159818

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 298  tcgcctcccgcaccgcctcct 318
            |||||||||||||||||||||
Sbjct: 2565 tcgcctcccgcaccgcctcct 2585
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>emb|CR974477.12| Pig DNA sequence from clone CH242-217L7 on chromosome 17, complete
             sequence
          Length = 204661

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 172   gcagccccaccgtccccagccccgc 196
             |||||||||||||| ||||||||||
Sbjct: 42592 gcagccccaccgtcgccagccccgc 42568
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>ref|NM_001034456.1| Bos taurus similar to Myeloid leukemia factor 2
           (Myelodysplasia-myeloid leukemia factor 2) (MGC129121),
           mRNA
          Length = 1491

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 300 gcctcccgcaccgcctcctc 319
           ||||||||||||||||||||
Sbjct: 38  gcctcccgcaccgcctcctc 19
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>ref|XM_847355.1| PREDICTED: Canis familiaris similar to Transcription factor AP-1
           (Activator protein 1) (AP1) (Proto-oncogene c-jun)
           (V-jun avian sarcoma virus 17 oncogene homolog) (Jun A)
           (AH119), transcript variant 1 (LOC609429), mRNA
          Length = 1606

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  cgccgccgcagcctcaggcg 101
           ||||||||||||||||||||
Sbjct: 133 cgccgccgcagcctcaggcg 114
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>ref|XM_860621.1| PREDICTED: Canis familiaris similar to Transcription factor AP-1
           (Activator protein 1) (AP1) (Proto-oncogene c-jun)
           (V-jun avian sarcoma virus 17 oncogene homolog) (Jun A)
           (AH119), transcript variant 6 (LOC609429), mRNA
          Length = 1615

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  cgccgccgcagcctcaggcg 101
           ||||||||||||||||||||
Sbjct: 133 cgccgccgcagcctcaggcg 114
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>ref|XM_860606.1| PREDICTED: Canis familiaris similar to Transcription factor AP-1
           (Activator protein 1) (AP1) (Proto-oncogene c-jun)
           (V-jun avian sarcoma virus 17 oncogene homolog) (Jun A)
           (AH119), transcript variant 5 (LOC609429), mRNA
          Length = 1576

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  cgccgccgcagcctcaggcg 101
           ||||||||||||||||||||
Sbjct: 133 cgccgccgcagcctcaggcg 114
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>ref|XM_860591.1| PREDICTED: Canis familiaris similar to Transcription factor AP-1
           (Activator protein 1) (AP1) (Proto-oncogene c-jun)
           (V-jun avian sarcoma virus 17 oncogene homolog) (Jun A)
           (AH119), transcript variant 4 (LOC609429), mRNA
          Length = 1639

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  cgccgccgcagcctcaggcg 101
           ||||||||||||||||||||
Sbjct: 133 cgccgccgcagcctcaggcg 114
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>ref|XM_860575.1| PREDICTED: Canis familiaris similar to Transcription factor AP-1
           (Activator protein 1) (AP1) (Proto-oncogene c-jun)
           (V-jun avian sarcoma virus 17 oncogene homolog) (Jun A)
           (AH119), transcript variant 3 (LOC609429), mRNA
          Length = 1414

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  cgccgccgcagcctcaggcg 101
           ||||||||||||||||||||
Sbjct: 133 cgccgccgcagcctcaggcg 114
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>ref|XM_860558.1| PREDICTED: Canis familiaris similar to Transcription factor AP-1
           (Activator protein 1) (AP1) (Proto-oncogene c-jun)
           (V-jun avian sarcoma virus 17 oncogene homolog) (Jun A)
           (AH119), transcript variant 2 (LOC609429), mRNA
          Length = 1672

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  cgccgccgcagcctcaggcg 101
           ||||||||||||||||||||
Sbjct: 133 cgccgccgcagcctcaggcg 114
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>gb|AC123519.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0017B18, complete sequence
          Length = 150279

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 302   ctcccgcaccgcctcctcatcgtcctcc 329
             |||||||||  |||||||||||||||||
Sbjct: 57444 ctcccgcacatcctcctcatcgtcctcc 57471
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>emb|AL132775.29|HSDJ46C2 Human DNA sequence from clone RP1-46C2 on chromosome 6p22.2-23 Contains
             the 5' end of the E2F3 gene for E2F transcription factor 3
             (E2F-3, KIAA0075) and two CpG islands, complete sequence
          Length = 109902

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   ccccaccgtccccagccccg 195
             ||||||||||||||||||||
Sbjct: 97074 ccccaccgtccccagccccg 97093
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>gb|AF547386.1| Homo sapiens E2F transcription factor 3 (E2F3) gene, complete cds
          Length = 93003

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 176 ccccaccgtccccagccccg 195
           ||||||||||||||||||||
Sbjct: 907 ccccaccgtccccagccccg 926
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>gb|AC069021.9| Homo sapiens chromosome 10 clone RP11-254K3, complete sequence
          Length = 175464

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 331   tctccctccccacatcctcc 350
             ||||||||||||||||||||
Sbjct: 67745 tctccctccccacatcctcc 67764
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>emb|BX842652.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 7/11
          Length = 346148

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 117    ccgttcccggcgatcttcac 136
              ||||||||||||||||||||
Sbjct: 276781 ccgttcccggcgatcttcac 276800
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>emb|BX572608.1| Rhodopseudomonas palustris CGA009 complete genome; segment 16/16
          Length = 227214

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 239   gctgcgccccgccgccgtgc 258
             ||||||||||||||||||||
Sbjct: 63639 gctgcgccccgccgccgtgc 63658
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>emb|AL162758.2|NMA7Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment
              7/7
          Length = 195767

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 232    cctcgccgctgcgccccgccgccg 255
              ||||||||||||||| ||||||||
Sbjct: 167326 cctcgccgctgcgccgcgccgccg 167349
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>emb|AJ748332.1| Heliothis virescens mRNA for putative chemosensory receptor 17
          Length = 1341

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 236  gccgctgcgccccgccgccg 255
            ||||||||||||||||||||
Sbjct: 1129 gccgctgcgccccgccgccg 1148
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 233    ctcgccgctgcgccccgccg 252
              ||||||||||||||||||||
Sbjct: 681498 ctcgccgctgcgccccgccg 681517
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>gb|AC151294.3| Mus musculus BAC clone RP23-137I7 from chromosome 17, complete sequence
          Length = 206868

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 171    ggcagccccaccgtccccag 190
              ||||||||||||||||||||
Sbjct: 166544 ggcagccccaccgtccccag 166525
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>gb|BC104523.1| Bos taurus similar to Myeloid leukemia factor 2
           (Myelodysplasia-myeloid leukemia factor 2), mRNA (cDNA
           clone MGC:129121 IMAGE:8122117), complete cds
          Length = 1491

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 300 gcctcccgcaccgcctcctc 319
           ||||||||||||||||||||
Sbjct: 38  gcctcccgcaccgcctcctc 19
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>gb|AE002098.2| Neisseria meningitidis MC58, complete genome
          Length = 2272360

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 232    cctcgccgctgcgccccgccgccg 255
              ||||||||||||||| ||||||||
Sbjct: 288791 cctcgccgctgcgccgcgccgccg 288768
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 302     ctcccgcaccgcctcctcatcgtcctcc 329
               |||||||||  |||||||||||||||||
Sbjct: 1161638 ctcccgcacatcctcctcatcgtcctcc 1161665
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 306      cgcaccgcctcctcatcgtcctcc 329
                ||||||||||||||| ||||||||
Sbjct: 19885292 cgcaccgcctcctcaccgtcctcc 19885315
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 237      ccgctgcgccccgccgccgt 256
                ||||||||||||||||||||
Sbjct: 19449871 ccgctgcgccccgccgccgt 19449890
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>gb|AC093124.3| Papio anubis clone RP41-216E17, complete sequence
          Length = 190322

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 324   tcctccgtctccctccccacatcc 347
             |||||||||||||||||| |||||
Sbjct: 17802 tcctccgtctccctcccctcatcc 17825
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>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0476H10
          Length = 151703

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   ccgctgcgccccgccgccgt 256
             ||||||||||||||||||||
Sbjct: 67398 ccgctgcgccccgccgccgt 67417
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>dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBb0034B12
          Length = 124083

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 306    cgcaccgcctcctcatcgtcctcc 329
              ||||||||||||||| ||||||||
Sbjct: 109732 cgcaccgcctcctcaccgtcctcc 109755
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>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0475F05
          Length = 147522

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 237    ccgctgcgccccgccgccgt 256
              ||||||||||||||||||||
Sbjct: 135362 ccgctgcgccccgccgccgt 135381
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>gb|AY037858.1| Cercopithicine herpesvirus 15 strain LCL8664, complete genome
          Length = 171096

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 313   cctcctcatcgtcctccgtctccc 336
             |||||||||| |||||||||||||
Sbjct: 45241 cctcctcatcttcctccgtctccc 45264
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>dbj|AK101828.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068F13, full
           insert sequence
          Length = 2862

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 306 cgcaccgcctcctcatcgtcctcc 329
           ||||||||||||||| ||||||||
Sbjct: 646 cgcaccgcctcctcaccgtcctcc 669
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>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome
          Length = 2153922

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 232     cctcgccgctgcgccccgccgccg 255
               ||||||||||||||| ||||||||
Sbjct: 1671843 cctcgccgctgcgccgcgccgccg 1671866
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 235    cgccgctgcgccccgccgcc 254
              ||||||||||||||||||||
Sbjct: 682070 cgccgctgcgccccgccgcc 682051
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 302     ctcccgcaccgcctcctcatcgtcctcc 329
               |||||||||  |||||||||||||||||
Sbjct: 1159359 ctcccgcacatcctcctcatcgtcctcc 1159386
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>gb|AC132481.4| Mus musculus BAC clone RP23-14I14 from 17, complete sequence
          Length = 225031

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 171    ggcagccccaccgtccccag 190
              ||||||||||||||||||||
Sbjct: 206196 ggcagccccaccgtccccag 206215


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,253,146
Number of Sequences: 3902068
Number of extensions: 2253146
Number of successful extensions: 50534
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50095
Number of HSP's gapped (non-prelim): 439
length of query: 362
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 340
effective length of database: 17,147,199,772
effective search space: 5830047922480
effective search space used: 5830047922480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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