>MMT1_HORVU (Q9MBC2) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met|
           S-methyltransferase) (Hv-MMT1)
          Length = 1088

 Score = 79.0 bits (193), Expect = 3e-15
 Identities = 42/58 (72%), Positives = 42/58 (72%)
 Frame = +3

Query: 189 MAAAAGDVEAFLXXXXXXXXXXXXXXXXVLERLEAPATRAEARRLLGAVRRRFAAGGP 362
           MAAAAGDVEAFL                VLERLEAPATRAEARRLLGAVRRRFAAGGP
Sbjct: 1   MAAAAGDVEAFLAACQASGDAAYGAAKAVLERLEAPATRAEARRLLGAVRRRFAAGGP 58

>MMT1_MAIZE (Q8W519) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met|
           S-methyltransferase)
          Length = 1091

 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 34/58 (58%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
 Frame = +3

Query: 189 MAAAAG---DVEAFLXXXXXXXXXXXXXXXXVLERLEAPATRAEARRLLGAVRRRFAA 353
           MAA AG   DV+AFL                VLERL APATR  ARRLLGAVRRRFAA
Sbjct: 1   MAALAGEDKDVDAFLADCTASGDAAYGAAKAVLERLHAPATRPAARRLLGAVRRRFAA 58

>MMT1_WOLBI (Q9SWR3) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met|
           S-methyltransferase)
          Length = 1088

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = +3

Query: 204 GDVEAFLXXXXXXXXXXXXXXXXVLERLEAPATRAEARRLLGAVRRRFAAGG 359
           G ++ FL                +LERLE P TR EAR  L  ++++    G
Sbjct: 9   GSIDEFLNHCSQSGDSAYSALRSLLERLEKPDTRTEARIFLAHLQKKLDNDG 60

>NOTC3_RAT (Q9R172) Neurogenic locus notch homolog protein 3 precursor (Notch 3)|
            [Contains: Notch 3 extracellular truncation; Notch 3
            intracellular domain]
          Length = 2319

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
 Frame = +1

Query: 40   GGDVPGGAYIATGLLSAIAV-----HLTNPSPPAPA--LPARTHSKVPNRAS 174
            G   PGG  ++ GLL+ +AV      L  P+PP P+  LP    S++ N A+
Sbjct: 2150 GRQPPGGCVLSLGLLNPVAVPLDWARLPPPAPPGPSFLLPLAPGSQLLNPAT 2201

>NOTC3_HUMAN (Q9UM47) Neurogenic locus notch homolog protein 3 precursor (Notch 3)|
            [Contains: Notch 3 extracellular truncation; Notch 3
            intracellular domain]
          Length = 2321

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
 Frame = +1

Query: 40   GGDVPGGAYIATGLLSAIAV-----HLTNPSPPAPA 132
            G   PGG  ++ GLL+ +AV      L  P+PP P+
Sbjct: 2149 GRQPPGGCVLSLGLLNPVAVPLDWARLPPPAPPGPS 2184

>MMT1_ARATH (Q9LTB2) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met|
           S-methyltransferase)
          Length = 1071

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 17/50 (34%), Positives = 22/50 (44%)
 Frame = +3

Query: 195 AAAGDVEAFLXXXXXXXXXXXXXXXXVLERLEAPATRAEARRLLGAVRRR 344
           A    V+ FL                VLERLE P TR++AR  L  + +R
Sbjct: 2   ADLSSVDEFLNQCKQSGDAAYGALRSVLERLEDPNTRSKARIFLSDIYKR 51

>NOTC3_MOUSE (Q61982) Neurogenic locus notch homolog protein 3 precursor (Notch 3)|
            [Contains: Notch 3 extracellular truncation; Notch 3
            intracellular domain]
          Length = 2318

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
 Frame = +1

Query: 40   GGDVPGGAYIATGLLSAIAV-----HLTNPSPPAPA 132
            G   PGG  ++ GLL+ +AV      L  P+PP P+
Sbjct: 2149 GRQPPGGCVLSFGLLNPVAVPLDWARLPPPAPPGPS 2184

>SYFB_CLOAB (Q97GL0) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 792

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 10  ELTVVPLVVHGGDVPGGAYIATGLLSAI 93
           E  +VP+ +HG  +PGG  I  G L  +
Sbjct: 86  ENDIVPVALHGSTLPGGVKIKKGKLRGV 113

>STAM1_HUMAN (Q92783) Signal transducing adapter molecule 1 (STAM-1)|
          Length = 539

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +1

Query: 34  VHGGDVPGGAYIATGLLSAIAVHLTNPSPPAPALPARTHSKVPNRASRAV 183
           V+ G  P GAY+  G  +A   HL + S P   L + + + VP  A+ A+
Sbjct: 403 VYAGPPPSGAYLVAG--NAQMSHLQSYSLPPEQLSSLSQAVVPPSANPAL 450

>EYA_DROME (Q05201) Developmental protein eyes absent (EC 3.1.3.48) (Protein|
           Clift)
          Length = 766

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = +3

Query: 129 CSSRSNPLEGTEPSVQSRPGMAAAA 203
           CSS SNPL+G   +V S    AAAA
Sbjct: 235 CSSASNPLDGGAVAVNSSAVAAAAA 259

>RHLB_XANOR (Q5GUR8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)|
          Length = 574

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = +1

Query: 22  VPLVVHGGDVPGGAYIATGLLSAIAVHLTNPSPPAPALPAR 144
           +P+ + GGDV G A   TG   A  V + N     PAL  R
Sbjct: 40  LPVALPGGDVAGQAQTGTGKTLAFLVAVMNRLLNRPALADR 80

>CQ039_HUMAN (Q8IVV7) Protein C17orf39|
          Length = 300

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
 Frame = +1

Query: 52  PGGAYIATGLLSAIAVHLTNPSPPA-----PALPARTHSKVPNRASRA 180
           PG +  AT L S  A  +  P PPA     PA+P RT    P  AS A
Sbjct: 52  PGLSLPATLLGSRAAAAVPLPLPPALAPGDPAMPVRTECPPPAGASAA 99


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,993,852
Number of Sequences: 219361
Number of extensions: 521079
Number of successful extensions: 2675
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2669
length of database: 80,573,946
effective HSP length: 96
effective length of database: 59,515,290
effective search space used: 1428366960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)