Clone Information

BLAST Search Result

Clone Name	bastl26e11
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	REL_HUMAN (Q04864) C-Rel proto-oncogene protein (C-Rel protein)	34	0.082
2	HIS42_SILPO (Q5LR59) 1-(5-phosphoribosyl)-5-[(5-phosphoribosylam...	31	0.69
3	KGUA_ACIAD (Q6F7H0) Guanylate kinase (EC 2.7.4.8) (GMP kinase)	31	0.90
4	RS14_RAT (P13471) 40S ribosomal protein S14	30	1.2
5	RS14_MOUSE (P62264) 40S ribosomal protein S14	30	1.2
6	RS14_HUMAN (P62263) 40S ribosomal protein S14	30	1.2
7	RS14_CRIGR (P62265) 40S ribosomal protein S14	30	1.2
8	RS14_KLULA (P27069) 40S ribosomal protein S14 (RP59)	30	2.0
9	ATXR3_ARATH (O23372) Probable histone-lysine N-methyltransferase...	30	2.0
10	RS14_CHLRE (P46295) 40S ribosomal protein S14	29	3.4
11	RS14B_YEAST (P39516) 40S ribosomal protein S14-B (RP59B)	28	4.5
12	RS14A_YEAST (P06367) 40S ribosomal protein S14-A (RP59A)	28	4.5
13	TRAM4_ECOLI (Q00186) Protein traM	28	4.5
14	RS14_PROCL (P48855) 40S ribosomal protein S14	28	4.5
15	RS14_PODCA (Q08699) 40S ribosomal protein S14	28	4.5
16	RS141_MAIZE (P19950) 40S ribosomal protein S14 (Clone MCH1)	28	5.9
17	RS14_CAEEL (P48150) 40S ribosomal protein S14	28	5.9
18	SYMPK_HUMAN (Q92797) Symplekin	28	5.9
19	MURG_CAUCR (Q9A5A1) UDP-N-acetylglucosamine--N-acetylmuramyl-(pe...	28	5.9
20	RS14_CANAL (Q96W53) 40S ribosomal protein S14	28	5.9
21	RS143_ARATH (P42036) 40S ribosomal protein S14-3	28	5.9
22	RS142_MAIZE (P19951) 40S ribosomal protein S14 (Clone MCH2)	28	5.9
23	RS142_ARATH (Q9CAX6) 40S ribosomal protein S14-2	28	5.9
24	RS141_ARATH (Q9SIH0) 40S ribosomal protein S14-1	28	5.9
25	DPOE_CRYNE (Q5K9M7) DNA polymerase epsilon, catalytic subunit A ...	28	5.9
26	SGS4_DROME (Q00725) Salivary glue protein Sgs-4 precursor	28	5.9
27	SYE2_HELPY (O25360) GlutamylGlutaminyl-tRNA synthetase (EC 6.1.1...	28	7.7
28	SYE2_HELPJ (Q9ZLJ1) GlutamylGlutaminyl-tRNA synthetase (EC 6.1.1...	28	7.7
29	DHRS3_HUMAN (O75911) Short-chain dehydrogenase/reductase 3 (EC 1...	28	7.7
30	DHRS3_BOVIN (O77769) Short-chain dehydrogenase/reductase 3 (EC 1...	28	7.7
31	RS14_NEUCR (P19115) 40S ribosomal protein S14 (CRP2)	28	7.7
32	UBP2_YEAST (Q01476) Ubiquitin carboxyl-terminal hydrolase 2 (EC ...	28	7.7
33	GCC7_CAEEL (Q21770) Germ cell expressed protein R06C7.1	23	9.1
34	CP126_MYCTU (P63711) Putative cytochrome P450 126 (EC 1.14.-.-)	27	10.0
35	CP126_MYCBO (P63712) Putative cytochrome P450 126 (EC 1.14.-.-)	27	10.0
36	SYI_XANOR (Q5H2E1) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isole...	27	10.0
37	SYI_XANC5 (Q3BW42) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isole...	27	10.0
38	DHRS3_MOUSE (O88876) Short-chain dehydrogenase/reductase 3 (EC 1...	27	10.0
39	SIPA1_MOUSE (P46062) Signal-induced proliferation-associated pro...	27	10.0

>REL_HUMAN (Q04864) C-Rel proto-oncogene protein (C-Rel protein)|
          Length = 619

 Score = 34.3 bits (77), Expect = 0.082
 Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
 Frame = +2

Query: 71  LPSSSWTSLAD*SPNSPQIPPLS----REIPNLAHGRRPWCRAP 190
           LPSSSW+S+A  +P S    PLS    R +P+ + G  P+ R P
Sbjct: 407 LPSSSWSSVAHPTPRSGNTNPLSSFSTRTLPSNSQGIPPFLRIP 450

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>HIS42_SILPO (Q5LR59) 1-(5-phosphoribosyl)-5-[(5-|
          phosphoribosylamino)methylideneamino]
          imidazole-4-carboxamide isomerase 2 (EC 5.3.1.16)
          (Phosphoribosylformimino-5-aminoimidazole carboxamide
          ribotide isomerase 2)
          Length = 247

 Score = 31.2 bits (69), Expect = 0.69
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -2

Query: 82 GRREAPIFWHTVPGETVEGLGSA 14
          GR +AP+ WH  P ETV G  SA
Sbjct: 20 GRLDAPMLWHVDPFETVSGWASA 42

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>KGUA_ACIAD (Q6F7H0) Guanylate kinase (EC 2.7.4.8) (GMP kinase)|
          Length = 207

 Score = 30.8 bits (68), Expect = 0.90
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -1

Query: 167 SREQDSGFREKGEGFGENWGFNQRAKSRRKKGGADILAHSSWR 39
           S+ +D+GF E  E FG  +G +Q    ++   G D+L    W+
Sbjct: 61  SQVEDNGFIEYAEVFGNYYGTSQATVKQQLAKGHDVLLEIDWQ 103

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>RS14_RAT (P13471) 40S ribosomal protein S14|
          Length = 150

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 193 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 74
           +R+ TP P   S +R  AR G  +GRI       S S R  GGRR
Sbjct: 102 NRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRR 146

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>RS14_MOUSE (P62264) 40S ribosomal protein S14|
          Length = 150

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 193 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 74
           +R+ TP P   S +R  AR G  +GRI       S S R  GGRR
Sbjct: 102 NRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRR 146

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>RS14_HUMAN (P62263) 40S ribosomal protein S14|
          Length = 150

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 193 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 74
           +R+ TP P   S +R  AR G  +GRI       S S R  GGRR
Sbjct: 102 NRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRR 146

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>RS14_CRIGR (P62265) 40S ribosomal protein S14|
          Length = 150

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 193 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 74
           +R+ TP P   S +R  AR G  +GRI       S S R  GGRR
Sbjct: 102 NRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRR 146

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>RS14_KLULA (P27069) 40S ribosomal protein S14 (RP59)|
          Length = 137

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 193 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 74
           +RS TP P   + +R  AR G  +GRI       S S R  GGRR
Sbjct: 89  TRSKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDSTRKKGGRR 133

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>ATXR3_ARATH (O23372) Probable histone-lysine N-methyltransferase ATXR3 (EC|
           2.1.1.43) (Trithorax-related protein 3) (TRX-related
           protein 3) (Protein SET DOMAIN GROUP 2)
          Length = 2351

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -1

Query: 140 EKGEGFGENWGFNQRAKSRRK-KGGADILAHSSWRD 36
           EKGE  GE+W  ++  K+ +  KGG +     SWRD
Sbjct: 174 EKGEIVGESWKKDEPTKADKNWKGGKEEREFRSWRD 209

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>RS14_CHLRE (P46295) 40S ribosomal protein S14|
          Length = 153

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 193 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 74
           +R+ TP P   S +R  AR G  +GRI       + S R  GGRR
Sbjct: 105 NRTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDSTRRKGGRR 149

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>RS14B_YEAST (P39516) 40S ribosomal protein S14-B (RP59B)|
          Length = 137

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 193 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 74
           +R+ TP P   + +R  AR G  +GRI       S S R  GGRR
Sbjct: 89  TRTKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDSTRKKGGRR 133

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>RS14A_YEAST (P06367) 40S ribosomal protein S14-A (RP59A)|
          Length = 136

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 193 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 74
           +R+ TP P   + +R  AR G  +GRI       S S R  GGRR
Sbjct: 88  TRTKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDSTRKKGGRR 132

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>TRAM4_ECOLI (Q00186) Protein traM|
          Length = 144

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -1

Query: 182 DTMASSREQDSGFREKGEGFGENWGFNQRAKSRRKKGGA 66
           D+ A   E  + F+E+ EG    WG + +AK+ R    A
Sbjct: 38  DSAAKQEEILAAFKEELEGIAHRWGEDAKAKAERMLNAA 76

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>RS14_PROCL (P48855) 40S ribosomal protein S14|
          Length = 151

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 193 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 74
           +++ TP P   S +R  AR G  +GRI       S S R  GGRR
Sbjct: 103 NKTKTPGPGGQSALRALARAGMKIGRIEDVTPVPSDSTRRKGGRR 147

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>RS14_PODCA (Q08699) 40S ribosomal protein S14|
          Length = 151

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
 Frame = -2

Query: 193 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 74
           +R+ TP P   S +R  AR G  +GRI       S   R  GGRR
Sbjct: 103 NRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDCTRRKGGRR 147

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>RS141_MAIZE (P19950) 40S ribosomal protein S14 (Clone MCH1)|
          Length = 149

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 193 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 74
           +++ TP P   S +R  AR G  +GRI       + S R  GGRR
Sbjct: 101 NKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDSTRRKGGRR 145

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>RS14_CAEEL (P48150) 40S ribosomal protein S14|
          Length = 152

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
 Frame = -2

Query: 193 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 74
           +R+ TP P   S +R  AR G  +GRI       S   R  GGRR
Sbjct: 104 TRTKTPGPGAQSALRALARAGMKIGRIEDVTPIPSDCTRRKGGRR 148

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>SYMPK_HUMAN (Q92797) Symplekin|
          Length = 1274

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = -2

Query: 193  SRSSTPWPPPVSKIRDFARKGRDLGRIGASISERSPGGRREAPIFWHTVPG 41
            S S+ P PPP  +  DF  +G +    G  IS     G  EA +   ++ G
Sbjct: 1175 SPSARPGPPPSEEAMDFREEGPECETPGIFISMDDDSGLTEAALLDSSLEG 1225

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>MURG_CAUCR (Q9A5A1) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 361

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +3

Query: 54  CQNIGASLLPPGLRSLIEAPILPKSLPFLAKSRILLTGGGHGVELL 191
           C ++  + + P +R+L + P L   +      R+L+TGG  G  LL
Sbjct: 157 CAHVVGNPVRPPVRALFDVPYLAPEVQL----RVLVTGGSQGARLL 198

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>RS14_CANAL (Q96W53) 40S ribosomal protein S14|
          Length = 134

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 193 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 74
           +++ TP P   S +R  AR G  +GRI       S S R  GGRR
Sbjct: 86  TKTKTPGPGGQSALRALARSGLRIGRIEDVTPVPSDSTRRKGGRR 130

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>RS143_ARATH (P42036) 40S ribosomal protein S14-3|
          Length = 150

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 193 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 74
           +++ TP P   S +R  AR G  +GRI       + S R  GGRR
Sbjct: 102 NKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRR 146

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>RS142_MAIZE (P19951) 40S ribosomal protein S14 (Clone MCH2)|
          Length = 150

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 193 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 74
           +++ TP P   S +R  AR G  +GRI       + S R  GGRR
Sbjct: 102 NKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDSTRRKGGRR 146

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>RS142_ARATH (Q9CAX6) 40S ribosomal protein S14-2|
          Length = 150

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 193 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 74
           +++ TP P   S +R  AR G  +GRI       + S R  GGRR
Sbjct: 102 NKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRR 146

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>RS141_ARATH (Q9SIH0) 40S ribosomal protein S14-1|
          Length = 150

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 193 SRSSTPWPPPVSKIRDFARKGRDLGRIG-----ASISERSPGGRR 74
           +++ TP P   S +R  AR G  +GRI       + S R  GGRR
Sbjct: 102 NKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRR 146

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>DPOE_CRYNE (Q5K9M7) DNA polymerase epsilon, catalytic subunit A (EC 2.7.7.7)|
           (DNA polymerase II subunit A)
          Length = 2250

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -1

Query: 146 FREKGEGFGENWGFNQRAKSRRK-KGGADILAHSSWRDS*RPGLSSNKA 3
           FR +G G G  +G N R   RR+ +GG       ++    RP  S+N+A
Sbjct: 7   FRGRGRGSGSGFGSNTRFTGRRRGRGGGGGGGGVAYGIDRRPATSTNQA 55

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>SGS4_DROME (Q00725) Salivary glue protein Sgs-4 precursor|
          Length = 297

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 13/36 (36%), Positives = 14/36 (38%)
 Frame = +2

Query: 107 SPNSPQIPPLSREIPNLAHGRRPWCRAPTPTCLTWP 214
           +P     PP  R  P       P CR   PTC T P
Sbjct: 63  TPKCETTPPTCRTEPPTCKTEPPTCRTEPPTCKTKP 98



 Score = 27.7 bits (60), Expect = 7.7
 Identities = 13/35 (37%), Positives = 14/35 (40%)
 Frame = +2

Query: 110 PNSPQIPPLSREIPNLAHGRRPWCRAPTPTCLTWP 214
           P     PP  R  P     + P CR   PTC T P
Sbjct: 78  PTCKTEPPTCRTEPPTCKTKPPTCRTEPPTCRTEP 112

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>SYE2_HELPY (O25360) GlutamylGlutaminyl-tRNA synthetase (EC 6.1.1.-) (GluGlnRS)|
           (Glutamyl-tRNA synthetase 2) (Glutamate--tRNA ligase 2)
           (GluRS 2)
          Length = 439

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 14/24 (58%), Positives = 14/24 (58%)
 Frame = +3

Query: 123 KSLPFLAKSRILLTGGGHGVELLL 194
           K   F    RILLTG  HGVEL L
Sbjct: 399 KGKDFFKPLRILLTGNSHGVELPL 422

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>SYE2_HELPJ (Q9ZLJ1) GlutamylGlutaminyl-tRNA synthetase (EC 6.1.1.-) (GluGlnRS)|
           (Glutamyl-tRNA synthetase 2) (Glutamate--tRNA ligase 2)
           (GluRS 2)
          Length = 439

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 14/24 (58%), Positives = 14/24 (58%)
 Frame = +3

Query: 123 KSLPFLAKSRILLTGGGHGVELLL 194
           K   F    RILLTG  HGVEL L
Sbjct: 399 KGKDFFKPLRILLTGNSHGVELPL 422

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>DHRS3_HUMAN (O75911) Short-chain dehydrogenase/reductase 3 (EC 1.1.-.-)|
           (Retinal short-chain dehydrogenase/reductase 1)
           (retSDR1) (DD83.1)
          Length = 302

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 114 ILPKSLPFLAKSRILLTGGGHGV 182
           +LP  L  L++  +L+TGGG G+
Sbjct: 28  VLPAKLRDLSRENVLITGGGRGI 50

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>DHRS3_BOVIN (O77769) Short-chain dehydrogenase/reductase 3 (EC 1.1.-.-)|
           (Retinal short-chain dehydrogenase/reductase 1)
           (retSDR1)
          Length = 302

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 114 ILPKSLPFLAKSRILLTGGGHGV 182
           +LP  L  L++  +L+TGGG G+
Sbjct: 28  VLPAKLRDLSRENVLITGGGRGI 50

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>RS14_NEUCR (P19115) 40S ribosomal protein S14 (CRP2)|
          Length = 150

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
 Frame = -2

Query: 181 TPWPPPVSKIRDFARKGRDLGRI-----GASISERSPGGRR 74
           TP P   S +R  AR G  +GRI       S S R  GGRR
Sbjct: 106 TPGPGAQSALRALARSGMKIGRIEDVTPTPSDSTRRKGGRR 146

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>UBP2_YEAST (Q01476) Ubiquitin carboxyl-terminal hydrolase 2 (EC 3.1.2.15)|
            (Ubiquitin thioesterase 2) (Ubiquitin-specific-processing
            protease 2) (Deubiquitinating enzyme 2)
          Length = 1272

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -3

Query: 141  RERGGIWGELGLQSASEVQEEE 76
            R R GIW +   ++ SEVQEEE
Sbjct: 1217 RNRNGIWRKYNDETISEVQEEE 1238

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>GCC7_CAEEL (Q21770) Germ cell expressed protein R06C7.1|
          Length = 945

 Score = 23.1 bits (48), Expect(2) = 9.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 184 STPWPPPVSKIRDFARKGRDL 122
           ST  P P+    ++A++GRDL
Sbjct: 884 STSIPTPLYVANEYAKRGRDL 904



 Score = 22.7 bits (47), Expect(2) = 9.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 126 IWGELGLQSASEVQEEEGRR 67
           +WGEL  +   E +E +G R
Sbjct: 904 LWGELTTKGPIEAKESQGER 923

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>CP126_MYCTU (P63711) Putative cytochrome P450 126 (EC 1.14.-.-)|
          Length = 414

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 79 RREAPIFWHTVPGETVEGLG 20
          RREAP++WH     T +G G
Sbjct: 31 RREAPVYWHRPTEHTPDGEG 50

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>CP126_MYCBO (P63712) Putative cytochrome P450 126 (EC 1.14.-.-)|
          Length = 414

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 79 RREAPIFWHTVPGETVEGLG 20
          RREAP++WH     T +G G
Sbjct: 31 RREAPVYWHRPTEHTPDGEG 50

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>SYI_XANOR (Q5H2E1) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 943

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 15/40 (37%), Positives = 17/40 (42%)
 Frame = -2

Query: 163 VSKIRDFARKGRDLGRIGASISERSPGGRREAPIFWHTVP 44
           VS   D A   RD G + A+     PGG   A   W T P
Sbjct: 207 VSPTVDIAYPARDPGAVAAAFGATLPGGVGVAVPIWTTTP 246

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>SYI_XANC5 (Q3BW42) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 943

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 15/40 (37%), Positives = 17/40 (42%)
 Frame = -2

Query: 163 VSKIRDFARKGRDLGRIGASISERSPGGRREAPIFWHTVP 44
           VS   D A   RD G + A+   R P G   A   W T P
Sbjct: 207 VSPTVDIAYPARDPGAVAAAFGARLPAGVGVAVPIWTTTP 246

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>DHRS3_MOUSE (O88876) Short-chain dehydrogenase/reductase 3 (EC 1.1.-.-)|
           (Retinal short-chain dehydrogenase/reductase 1)
           (retSDR1)
          Length = 302

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 114 ILPKSLPFLAKSRILLTGGGHGV 182
           +LP  L  L++  +L+TGGG G+
Sbjct: 28  VLPPKLRDLSRESVLITGGGRGI 50

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>SIPA1_MOUSE (P46062) Signal-induced proliferation-associated protein 1 (Sipa-1)|
           (GTPase-activating protein Spa-1)
          Length = 1037

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
 Frame = +3

Query: 12  AAEPRPSTVSPGTVCQNIGASLLPPGLRSLIEAPILPKS--------LPFLAKSRILLTG 167
           A  P P +VSP  + +++   L P  LR    +P +P+         L F  K  IL   
Sbjct: 277 ALPPGPPSVSPRKLLEHVAPRLSPTCLRLGSASPKVPRQLLTLDEQVLSFQRKGGILYCR 336

Query: 168 GGHGVE 185
            G G E
Sbjct: 337 AGQGSE 342


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,356,491
Number of Sequences: 219361
Number of extensions: 701930
Number of successful extensions: 2826
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 2730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2824
length of database: 80,573,946
effective HSP length: 78
effective length of database: 63,463,788
effective search space used: 1523130912
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result