>RDRP_TMOB (P90211) RNA-directed RNA polymerase (EC 2.7.7.48) (183 kDa|
           protein) [Contains: Methyltransferase/RNA helicase
           (MT/HEL) (126 kDa protein)]
          Length = 1616

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
 Frame = +3

Query: 216 CRASATSGGSRSYAL-------VPADELSRALARQNSSLALHNKHSFAEDSAGAYPLVLR 374
           C ++  S G R YA+       +PADEL  AL R+N    L+    FAE+      L+L 
Sbjct: 186 CESNRYSSGGRVYAISLHSLYDIPADELGAALLRKNVH-TLYAAFHFAEE------LLLE 238

Query: 375 ISVRE 389
           +S  E
Sbjct: 239 VSTVE 243

>CPO_DROME (Q01617) Protein couch potato|
          Length = 738

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 17/65 (26%), Positives = 29/65 (44%)
 Frame = +3

Query: 237 GGSRSYALVPADELSRALARQNSSLALHNKHSFAEDSAGAYPLVLRISVRETSILTVKIS 416
           GG + +   P  +    L    SS + HN ++ +  SAGA    + I+    ++ T   S
Sbjct: 280 GGYQLHRYAPQQQQQHILLSSGSSSSKHNSNNNSNTSAGAASAAVPIATSVAAVPTTGGS 339

Query: 417 KKDNP 431
             D+P
Sbjct: 340 LPDSP 344

>ADG3_SCHPO (O74851) Protein adg3 precursor|
          Length = 1131

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 18/74 (24%), Positives = 33/74 (44%)
 Frame = +3

Query: 222  ASATSGGSRSYALVPADELSRALARQNSSLALHNKHSFAEDSAGAYPLVLRISVRETSIL 401
            +S TSG + S + +P+   S + +   S+ +   + S +     + P+   +S+      
Sbjct: 987  SSTTSGLTSSSSTIPSSTRSESNSESASTSSASKRSSSSTSLVQSNPVKTVVSLESYKFT 1046

Query: 402  TVKISKKDNPVDNY 443
            T KIS   NP   Y
Sbjct: 1047 TSKISLVKNPTKTY 1060


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,925,040
Number of Sequences: 219361
Number of extensions: 697706
Number of successful extensions: 1870
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1870
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)