ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl26e09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_186392.1| Oryza sativa (japonica cultivar-group), mRNA 206 5e-50
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 139 9e-30
3dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic D... 139 9e-30
4dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic D... 139 9e-30
5gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 1.6
6ref|XM_587292.2| PREDICTED: Bos taurus GABA transporter GAT-1 ho... 42 1.6
7gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 1.6
8emb|AL035071.17|HS1085F17 Human DNA sequence from clone RP5-1085... 42 1.6
9emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.6
10emb|BX294188.11| Zebrafish DNA sequence from clone DKEY-255G14, ... 42 1.6
11gb|AC153740.3| Colobus guereza clone CH272-157M1, complete sequence 40 6.5
12gb|AC158412.4| Cercopithecus aethiops clone CH252-436N4, complet... 40 6.5
13gb|CP000110.1| Synechococcus sp. CC9605, complete genome 40 6.5
14gb|DP000016.1| Pan troglodytes target 1 genomic scaffold 40 6.5
15gb|AC160935.2| Mus musculus BAC clone RP23-456B7 from chromosome... 40 6.5
16gb|AC147187.2| Pan troglodytes clone CH251-116A11, complete sequ... 40 6.5
17gb|AC141647.3| Mus musculus BAC clone RP23-64E12 from chromosome... 40 6.5
18gb|AC127224.3| Mus musculus BAC clone RP24-498F21 from chromosom... 40 6.5
19gb|AE017286.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 6.5
20gb|AC123665.9| Mus musculus chromosome 14, clone RP23-226A4, com... 40 6.5
21gb|AC136453.3| Mus musculus chromosome 19 clone RP24-327L21, com... 40 6.5
22emb|BX640404.2| Chicken DNA sequence from clone WAG-36O23, compl... 40 6.5
23gb|AC074021.7| Homo sapiens BAC clone RP11-354H2 from 7, complet... 40 6.5
24gb|AC158963.3| Mus musculus chromosome 1, clone RP23-321A12, com... 40 6.5
25gb|AC124158.3| Macaca mulatta clone CH250-337A5, complete sequence 40 6.5
26emb|BX322574.10| Zebrafish DNA sequence from clone DKEY-35I15 in... 40 6.5
27gb|DP000005.1| Macaca mulatta target 1 genomic scaffold 40 6.5
28gb|AC140486.4| Mus musculus BAC clone RP24-134B9 from chromosome... 40 6.5
29gb|AC157474.2| Mus musculus BAC clone RP24-565B5 from chromosome... 40 6.5
30gb|AC166003.3| Nomascus leucogenys leucogenys clone CH271-85O19,... 40 6.5
31emb|BX005394.8| Zebrafish DNA sequence from clone DKEY-3N15 in l... 40 6.5
32gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold 40 6.5
33gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold 40 6.5
34dbj|AP003796.2| Gallus gallus genomic DNA, chromosome 5, clone:2... 40 6.5
35gb|AF260225.1|AF260225 Homo sapiens TESTIN 2 and TESTIN 3 genes,... 40 6.5
36dbj|AB116263.1| Pisum sativum MKRN gene for makorin RING finger ... 40 6.5
37gb|AC151364.3| Macaca mulatta clone CH250-142M15, complete sequence 40 6.5
38dbj|AB097823.1| Pisum sativum MKRN mRNA for makorin ring-zinc-fi... 40 6.5
39dbj|AB097822.1| Pisum sativum MKRN mRNA for makorin ring-zinc-fi... 40 6.5
40dbj|AB097821.1| Pisum sativum MKRN mRNA for makorin ring-zinc-fi... 40 6.5
41dbj|AB097820.1| Pisum sativum MKRN mRNA for makorin ring-zinc-fi... 40 6.5
42dbj|AB097819.1| Pisum sativum MKRN mRNA for makorin ring-zinc-fi... 40 6.5
43dbj|AB097768.1| Pisum sativum MKRN mRNA for makorin ring-zinc-fi... 40 6.5
44gb|AC131084.13| Mus musculus chromosome 1, clone RP23-450D2, com... 40 6.5
45emb|AL929199.11| Mouse DNA sequence from clone RP23-458A10 on ch... 40 6.5
46gb|AC164977.2| Mus musculus BAC clone RP23-446B6 from chromosome... 40 6.5
47emb|AL805912.5| Mouse DNA sequence from clone RP23-425K3 on chro... 40 6.5

>ref|NM_186392.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2856

 Score =  206 bits (104), Expect = 5e-50
 Identities = 179/204 (87%)
 Strand = Plus / Plus

                                                                       
Query: 249 agctacgcactcgtcccggcggacgagctctcgcgagcgctcgccagacagaactccagt 308
           |||||||| ||||| ||||| |||||||||||||| | |||||| || || || || |||
Sbjct: 298 agctacgcgctcgtgccggccgacgagctctcgcgtgtgctcgcgaggcaaaattctagt 357

                                                                       
Query: 309 ttggcattgcataataaacattcgtttgctgaagacagtgctggtgcttatcctttggtg 368
           ||||||||||||||||||||||| |||||||| || ||||||||||| || |||||||||
Sbjct: 358 ttggcattgcataataaacattcatttgctgaggatagtgctggtgcgtaccctttggtg 417

                                                                       
Query: 369 cttagaatttctgtgcgtgaaacaagcattttgactgttaaaatcagcaagaaggataat 428
           ||||| || ||||| || |||||||||||||||||||| || |||||||| ||||| |||
Sbjct: 418 cttaggatatctgttcgagaaacaagcattttgactgtgaagatcagcaaaaaggacaat 477

                                   
Query: 429 ccagttgataactataagcgggca 452
           |||||||| |||||||| ||||||
Sbjct: 478 ccagttgagaactataaacgggca 501



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                     
Query: 165 ctccacagcttcctccacccagatctcgtgctgcgcctcgaccgcggggagtgccgcg 222
           |||||||||||||||||||| ||||||||||| |||||||| |||||||  |||||||
Sbjct: 214 ctccacagcttcctccacccggatctcgtgcttcgcctcgagcgcgggggttgccgcg 271



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  139 bits (70), Expect = 9e-30
 Identities = 106/118 (89%)
 Strand = Plus / Plus

                                                                           
Query: 306     agtttggcattgcataataaacattcgtttgctgaagacagtgctggtgcttatcctttg 365
               |||||||||||||||||||||||||| |||||||| || ||||||||||| || ||||||
Sbjct: 3242526 agtttggcattgcataataaacattcatttgctgaggatagtgctggtgcgtaccctttg 3242585

                                                                         
Query: 366     gtgcttagaatttctgtgcgtgaaacaagcattttgactgttaaaatcagcaagaagg 423
               |||||||| || ||||| || |||||||||||||||||||| || |||||||| ||||
Sbjct: 3242586 gtgcttaggatatctgttcgagaaacaagcattttgactgtgaagatcagcaaaaagg 3242643



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                         
Query: 165     ctccacagcttcctccacccagatctcgtgctgcgcctcgaccgcggggagtgccgcg 222
               |||||||||||||||||||| ||||||||||| |||||||| |||||||  |||||||
Sbjct: 3239572 ctccacagcttcctccacccggatctcgtgcttcgcctcgagcgcgggggttgccgcg 3239629



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                           
Query: 249     agctacgcactcgtcccggcggacgagctctcgcgagcgctcgc 292
               |||||||| ||||| ||||| |||||||||||||| | ||||||
Sbjct: 3239656 agctacgcgctcgtgccggccgacgagctctcgcgtgtgctcgc 3239699



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 421     aggataatccagttgataactataagcgggca 452
               |||| ||||||||||| |||||||| ||||||
Sbjct: 3242727 aggacaatccagttgagaactataaacgggca 3242758



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>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0455F03
          Length = 158201

 Score =  139 bits (70), Expect = 9e-30
 Identities = 106/118 (89%)
 Strand = Plus / Plus

                                                                          
Query: 306    agtttggcattgcataataaacattcgtttgctgaagacagtgctggtgcttatcctttg 365
              |||||||||||||||||||||||||| |||||||| || ||||||||||| || ||||||
Sbjct: 157516 agtttggcattgcataataaacattcatttgctgaggatagtgctggtgcgtaccctttg 157575

                                                                        
Query: 366    gtgcttagaatttctgtgcgtgaaacaagcattttgactgttaaaatcagcaagaagg 423
              |||||||| || ||||| || |||||||||||||||||||| || |||||||| ||||
Sbjct: 157576 gtgcttaggatatctgttcgagaaacaagcattttgactgtgaagatcagcaaaaagg 157633



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                        
Query: 165    ctccacagcttcctccacccagatctcgtgctgcgcctcgaccgcggggagtgccgcg 222
              |||||||||||||||||||| ||||||||||| |||||||| |||||||  |||||||
Sbjct: 154562 ctccacagcttcctccacccggatctcgtgcttcgcctcgagcgcgggggttgccgcg 154619



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                          
Query: 249    agctacgcactcgtcccggcggacgagctctcgcgagcgctcgc 292
              |||||||| ||||| ||||| |||||||||||||| | ||||||
Sbjct: 154646 agctacgcgctcgtgccggccgacgagctctcgcgtgtgctcgc 154689



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 421    aggataatccagttgataactataagcgggca 452
              |||| ||||||||||| |||||||| ||||||
Sbjct: 157717 aggacaatccagttgagaactataaacgggca 157748



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>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1714_H10
          Length = 191580

 Score =  139 bits (70), Expect = 9e-30
 Identities = 106/118 (89%)
 Strand = Plus / Plus

                                                                         
Query: 306   agtttggcattgcataataaacattcgtttgctgaagacagtgctggtgcttatcctttg 365
             |||||||||||||||||||||||||| |||||||| || ||||||||||| || ||||||
Sbjct: 52219 agtttggcattgcataataaacattcatttgctgaggatagtgctggtgcgtaccctttg 52278

                                                                       
Query: 366   gtgcttagaatttctgtgcgtgaaacaagcattttgactgttaaaatcagcaagaagg 423
             |||||||| || ||||| || |||||||||||||||||||| || |||||||| ||||
Sbjct: 52279 gtgcttaggatatctgttcgagaaacaagcattttgactgtgaagatcagcaaaaagg 52336



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                       
Query: 165   ctccacagcttcctccacccagatctcgtgctgcgcctcgaccgcggggagtgccgcg 222
             |||||||||||||||||||| ||||||||||| |||||||| |||||||  |||||||
Sbjct: 49265 ctccacagcttcctccacccggatctcgtgcttcgcctcgagcgcgggggttgccgcg 49322



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 249   agctacgcactcgtcccggcggacgagctctcgcgagcgctcgc 292
             |||||||| ||||| ||||| |||||||||||||| | ||||||
Sbjct: 49349 agctacgcgctcgtgccggccgacgagctctcgcgtgtgctcgc 49392



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 421   aggataatccagttgataactataagcgggca 452
             |||| ||||||||||| |||||||| ||||||
Sbjct: 52420 aggacaatccagttgagaactataaacgggca 52451



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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 193    tgctgcgcctcgaccgcggggagtgccgc 221
              ||||||||||||| ||||||||| |||||
Sbjct: 816560 tgctgcgcctcgagcgcggggagggccgc 816588



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>ref|XM_587292.2| PREDICTED: Bos taurus GABA transporter GAT-1 homolog (LOC407118),
            mRNA
          Length = 4183

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 134  cgccgccgtctgcctcgtctc 154
            |||||||||||||||||||||
Sbjct: 1365 cgccgccgtctgcctcgtctc 1385



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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 193     tgctgcgcctcgaccgcggggagtgccgc 221
               ||||||||||||| ||||||||| |||||
Sbjct: 1703279 tgctgcgcctcgagcgcggggagggccgc 1703307



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>emb|AL035071.17|HS1085F17 Human DNA sequence from clone RP5-1085F17 on chromosome 20q11.1-11.23
             Contains the DNMT3B gene encoding DNA Cytosine-5
             Methyltransferase 3 beta, the MAPRE1 gene encoding a
             microtubule-associated protein, RP/EB family, member 1,
             part of a novel gene, ESTs, STSs, GSSs, and three CpG
             islands, complete sequence
          Length = 118899

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 150   gtctcttccaggcttctccac 170
             |||||||||||||||||||||
Sbjct: 49262 gtctcttccaggcttctccac 49242



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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 193     tgctgcgcctcgaccgcggggagtgccgc 221
               ||||||||||||| ||||||||| |||||
Sbjct: 1589992 tgctgcgcctcgagcgcggggagggccgc 1590020



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>emb|BX294188.11| Zebrafish DNA sequence from clone DKEY-255G14, complete sequence
          Length = 261943

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 158    caggcttctccacagcttcctccac 182
              ||||||||||||||| |||||||||
Sbjct: 119847 caggcttctccacagattcctccac 119871



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>gb|AC153740.3| Colobus guereza clone CH272-157M1, complete sequence
          Length = 200890

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 458    atgtttacattgattctcac 477
              ||||||||||||||||||||
Sbjct: 179506 atgtttacattgattctcac 179487



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>gb|AC158412.4| Cercopithecus aethiops clone CH252-436N4, complete sequence
          Length = 213834

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 458    atgtttacattgattctcac 477
              ||||||||||||||||||||
Sbjct: 163587 atgtttacattgattctcac 163568



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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 190     tcgtgctgcgcctcgaccgc 209
               ||||||||||||||||||||
Sbjct: 2182181 tcgtgctgcgcctcgaccgc 2182200



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>gb|DP000016.1| Pan troglodytes target 1 genomic scaffold
          Length = 1623484

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 458    atgtttacattgattctcac 477
              ||||||||||||||||||||
Sbjct: 149287 atgtttacattgattctcac 149268



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>gb|AC160935.2| Mus musculus BAC clone RP23-456B7 from chromosome 9, complete sequence
          Length = 178690

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 460   gtttacattgattctcacca 479
             ||||||||||||||||||||
Sbjct: 42027 gtttacattgattctcacca 42046



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>gb|AC147187.2| Pan troglodytes clone CH251-116A11, complete sequence
          Length = 160822

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 458    atgtttacattgattctcac 477
              ||||||||||||||||||||
Sbjct: 149287 atgtttacattgattctcac 149268



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>gb|AC141647.3| Mus musculus BAC clone RP23-64E12 from chromosome 10, complete sequence
          Length = 217745

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 354   gcttatcctttggtgcttagaatt 377
             |||||||||||||| |||||||||
Sbjct: 20444 gcttatcctttggttcttagaatt 20467



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>gb|AC127224.3| Mus musculus BAC clone RP24-498F21 from chromosome 10, complete sequence
          Length = 162143

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 354    gcttatcctttggtgcttagaatt 377
              |||||||||||||| |||||||||
Sbjct: 113112 gcttatcctttggttcttagaatt 113135



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>gb|AE017286.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough plasmid pDV,
              complete sequence
          Length = 202301

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    tgccccgccgccgtctgcct 148
              ||||||||||||||||||||
Sbjct: 161464 tgccccgccgccgtctgcct 161445



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>gb|AC123665.9| Mus musculus chromosome 14, clone RP23-226A4, complete sequence
          Length = 241576

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 456    agatgtttacattgattctc 475
              ||||||||||||||||||||
Sbjct: 155296 agatgtttacattgattctc 155277



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>gb|AC136453.3| Mus musculus chromosome 19 clone RP24-327L21, complete sequence
          Length = 201474

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 454  acagatgtttacattgattc 473
            ||||||||||||||||||||
Sbjct: 9679 acagatgtttacattgattc 9660



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>emb|BX640404.2| Chicken DNA sequence from clone WAG-36O23, complete sequence
          Length = 136520

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 175   tcctccacccagatctcgtgctgc 198
             ||||||||||||||||| ||||||
Sbjct: 48366 tcctccacccagatctcctgctgc 48343



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>gb|AC074021.7| Homo sapiens BAC clone RP11-354H2 from 7, complete sequence
          Length = 26765

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 458   atgtttacattgattctcac 477
             ||||||||||||||||||||
Sbjct: 20536 atgtttacattgattctcac 20517



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>gb|AC158963.3| Mus musculus chromosome 1, clone RP23-321A12, complete sequence
          Length = 203604

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 334   ttgctgaagacagtgctggt 353
             ||||||||||||||||||||
Sbjct: 96815 ttgctgaagacagtgctggt 96796



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>gb|AC124158.3| Macaca mulatta clone CH250-337A5, complete sequence
          Length = 173421

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 458  atgtttacattgattctcac 477
            ||||||||||||||||||||
Sbjct: 5865 atgtttacattgattctcac 5846



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>emb|BX322574.10| Zebrafish DNA sequence from clone DKEY-35I15 in linkage group 3, complete
              sequence
          Length = 150999

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 316    tgcataataaacattcgttt 335
              ||||||||||||||||||||
Sbjct: 135471 tgcataataaacattcgttt 135452



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>gb|DP000005.1| Macaca mulatta target 1 genomic scaffold
          Length = 1678549

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 458    atgtttacattgattctcac 477
              ||||||||||||||||||||
Sbjct: 141929 atgtttacattgattctcac 141910



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>gb|AC140486.4| Mus musculus BAC clone RP24-134B9 from chromosome 3, complete sequence
          Length = 166094

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 452    aaacagatgtttacattgattctc 475
              |||||||||||| |||||||||||
Sbjct: 108235 aaacagatgtttgcattgattctc 108212



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>gb|AC157474.2| Mus musculus BAC clone RP24-565B5 from chromosome 9, complete sequence
          Length = 192701

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 460    gtttacattgattctcacca 479
              ||||||||||||||||||||
Sbjct: 178784 gtttacattgattctcacca 178803



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>gb|AC166003.3| Nomascus leucogenys leucogenys clone CH271-85O19, complete sequence
          Length = 164417

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 458   atgtttacattgattctcac 477
             ||||||||||||||||||||
Sbjct: 17306 atgtttacattgattctcac 17287



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>emb|BX005394.8| Zebrafish DNA sequence from clone DKEY-3N15 in linkage group 3,
             complete sequence
          Length = 190575

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 316   tgcataataaacattcgttt 335
             ||||||||||||||||||||
Sbjct: 90806 tgcataataaacattcgttt 90825



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>gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold
          Length = 1787293

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 458    atgtttacattgattctcac 477
              ||||||||||||||||||||
Sbjct: 122840 atgtttacattgattctcac 122821



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>gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold
          Length = 1825024

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 458    atgtttacattgattctcac 477
              ||||||||||||||||||||
Sbjct: 163587 atgtttacattgattctcac 163568



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>dbj|AP003796.2| Gallus gallus genomic DNA, chromosome 5, clone:26D12, complete sequence
          Length = 156014

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 175   tcctccacccagatctcgtgctgc 198
             ||||||||||||||||| ||||||
Sbjct: 42316 tcctccacccagatctcctgctgc 42339



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>gb|AF260225.1|AF260225 Homo sapiens TESTIN 2 and TESTIN 3 genes, complete cds, alternatively
              spliced
          Length = 162354

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 458    atgtttacattgattctcac 477
              ||||||||||||||||||||
Sbjct: 136231 atgtttacattgattctcac 136212



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>dbj|AB116263.1| Pisum sativum MKRN gene for makorin RING finger protein, exon 1-4,
           complete cds
          Length = 4206

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 420 aaggataatccagttgataa 439
           ||||||||||||||||||||
Sbjct: 928 aaggataatccagttgataa 947



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>gb|AC151364.3| Macaca mulatta clone CH250-142M15, complete sequence
          Length = 148725

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 458    atgtttacattgattctcac 477
              ||||||||||||||||||||
Sbjct: 141929 atgtttacattgattctcac 141910



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>dbj|AB097823.1| Pisum sativum MKRN mRNA for makorin ring-zinc-finger protein,
           partial cds, Type E
          Length = 330

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 420 aaggataatccagttgataa 439
           ||||||||||||||||||||
Sbjct: 180 aaggataatccagttgataa 199



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>dbj|AB097822.1| Pisum sativum MKRN mRNA for makorin ring-zinc-finger protein,
           partial cds, Type D
          Length = 337

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 420 aaggataatccagttgataa 439
           ||||||||||||||||||||
Sbjct: 187 aaggataatccagttgataa 206



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>dbj|AB097821.1| Pisum sativum MKRN mRNA for makorin ring-zinc-finger protein,
           partial cds, Type C
          Length = 339

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 420 aaggataatccagttgataa 439
           ||||||||||||||||||||
Sbjct: 189 aaggataatccagttgataa 208



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>dbj|AB097820.1| Pisum sativum MKRN mRNA for makorin ring-zinc-finger protein,
           partial cds, Type B
          Length = 347

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 420 aaggataatccagttgataa 439
           ||||||||||||||||||||
Sbjct: 197 aaggataatccagttgataa 216



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>dbj|AB097819.1| Pisum sativum MKRN mRNA for makorin ring-zinc-finger protein,
           partial cds, Type A
          Length = 371

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 420 aaggataatccagttgataa 439
           ||||||||||||||||||||
Sbjct: 221 aaggataatccagttgataa 240



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>dbj|AB097768.1| Pisum sativum MKRN mRNA for makorin ring-zinc-finger protein,
           complete cds
          Length = 1899

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 420 aaggataatccagttgataa 439
           ||||||||||||||||||||
Sbjct: 157 aaggataatccagttgataa 176



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>gb|AC131084.13| Mus musculus chromosome 1, clone RP23-450D2, complete sequence
          Length = 208140

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 334    ttgctgaagacagtgctggt 353
              ||||||||||||||||||||
Sbjct: 137617 ttgctgaagacagtgctggt 137598



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>emb|AL929199.11| Mouse DNA sequence from clone RP23-458A10 on chromosome 2, complete
             sequence
          Length = 95855

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   tctcttccaggcttctccac 170
             ||||||||||||||||||||
Sbjct: 76850 tctcttccaggcttctccac 76869



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>gb|AC164977.2| Mus musculus BAC clone RP23-446B6 from chromosome 14, complete sequence
          Length = 179146

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 456    agatgtttacattgattctc 475
              ||||||||||||||||||||
Sbjct: 156939 agatgtttacattgattctc 156958



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>emb|AL805912.5| Mouse DNA sequence from clone RP23-425K3 on chromosome 4, complete
             sequence
          Length = 151967

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 169   acagcttcctccacccagat 188
             ||||||||||||||||||||
Sbjct: 56582 acagcttcctccacccagat 56563


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,270,526
Number of Sequences: 3902068
Number of extensions: 3270526
Number of successful extensions: 66936
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66680
Number of HSP's gapped (non-prelim): 256
length of query: 479
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 457
effective length of database: 17,147,199,772
effective search space: 7836270295804
effective search space used: 7836270295804
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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