ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl26e07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478167.1| Oryza sativa (japonica cultivar-group), mRNA 272 9e-70
2dbj|AK070976.1| Oryza sativa (japonica cultivar-group) cDNA clon... 272 9e-70
3gb|AF499741.1| Oryza sativa CaM-binding transcription factor (CB... 264 2e-67
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 129 8e-27
5dbj|AP005190.3| Oryza sativa (japonica cultivar-group) genomic D... 129 8e-27
6ref|NM_196150.1| Oryza sativa (japonica cultivar-group) putative... 66 1e-07
7gb|AC113338.1| Oryza sativa (japonica cultivar-group) cultivar N... 66 1e-07
8gb|AC079935.3| Genomic sequence for Oryza sativa (japonica culti... 66 1e-07
9dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
10dbj|AK105116.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
11dbj|AK101479.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
12gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 66 1e-07
13gb|AC110576.12| Mus musculus chromosome 8, clone RP23-329K17, co... 48 0.025
14gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 42 1.5
15gb|AC079853.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
16ref|XM_959467.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.5
17ref|XM_330589.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.5
18gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.5
19ref|XM_388606.1| Gibberella zeae PH-1 chromosome 2 hypothetical ... 42 1.5
20gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
21gb|AC122165.37| Medicago truncatula clone mth2-32m22, complete s... 42 1.5
22gb|CP000264.1| Jannaschia sp. CCS1, complete genome 42 1.5
23gb|AC097279.5| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genom... 42 1.5
24dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
25dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
26gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 42 1.5
27gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
28gb|AC102288.11| Mus musculus chromosome 18, clone RP24-346H24, c... 40 6.0
29gb|BC107772.1| Homo sapiens cDNA clone MGC:104216 IMAGE:6451988,... 40 6.0
30gb|BC052105.1| Danio rerio zgc:56402, mRNA (cDNA clone MGC:56402... 40 6.0
31gb|AC122895.5| Mus musculus BAC clone RP23-69K14 from chromosome... 40 6.0
32gb|BC068996.1| Homo sapiens nuclear receptor co-repressor 1, mRN... 40 6.0
33gb|AC160963.2| Mus musculus BAC clone RP24-311B3 from chromosome... 40 6.0
34gb|AC142227.3| Mus musculus BAC clone RP24-115G21 from chromosom... 40 6.0
35gb|AC125320.4| Mus musculus BAC clone RP23-351P13 from chromosom... 40 6.0
36gb|BC035748.1| Homo sapiens nuclear receptor co-repressor 1, mRN... 40 6.0
37gb|BC050594.2| Homo sapiens nuclear receptor co-repressor 1, mRN... 40 6.0
38gb|BC058511.1| Homo sapiens nuclear receptor co-repressor 1, mRN... 40 6.0
39gb|AC163108.5| Mus musculus BAC clone RP23-46L17 from chromosome... 40 6.0
40gb|BC026028.1| Homo sapiens nuclear receptor co-repressor 1, mRN... 40 6.0
41gb|AC161175.5| Mus musculus chromosome 18, clone RP23-2J13, comp... 40 6.0
42emb|AL603708.13| Mouse DNA sequence from clone RP23-381C21 on ch... 40 6.0
43emb|AL844607.4| Mouse DNA sequence from clone RP24-280G18 on chr... 40 6.0
44gb|AC115889.13| Mus musculus chromosome 3, clone RP24-409N2, com... 40 6.0
45gb|AC009986.10| Homo sapiens chromosome 10 clone RP11-346D6, com... 40 6.0
46gb|AC105426.4| Homo sapiens BAC clone RP11-794N18 from 4, comple... 40 6.0
47gb|AC105288.3| Homo sapiens BAC clone RP11-554F9 from 4, complet... 40 6.0
48ref|XM_943989.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 6.0
49gb|AC025882.7| Homo sapiens chromosome 17, clone RP11-445F12, co... 40 6.0
50dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
51dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
52dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
53dbj|AB219939.1| Lycopersicon esculentum LeHSP110/ClpB mRNA for h... 40 6.0
54ref|NM_200324.1| Danio rerio zgc:56402 (zgc:56402), mRNA 40 6.0
55gb|AF247458.1|AF247458 Coptotermes formosanus clone Cf4:1A2-4 mi... 40 6.0
56gb|AC140052.4| Mus musculus BAC clone RP23-346E11 from chromosom... 40 6.0
57dbj|AP004809.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
58dbj|AP005462.5| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
59dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
60dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
61emb|BX545911.3| Mouse DNA sequence from clone RP24-319P20 on chr... 40 6.0
62emb|BX666064.10| Zebrafish DNA sequence from clone DKEY-6N3 in l... 40 6.0
63gb|AC005971.5|AC005971 Homo sapiens chromosome 17, clone hRPK.65... 40 6.0
64gb|AC167667.4| Culex pipiens quinquefasciatus, clone Culex pipie... 40 6.0
65ref|NM_006311.2| Homo sapiens nuclear receptor co-repressor 1 (N... 40 6.0
66gb|AF044209.1|AF044209 Homo sapiens nuclear receptor co-represso... 40 6.0
67gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
68emb|AL928783.4|CNS08CCD Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.0
69emb|AL731749.3|CNS08C7Y Oryza sativa chromosome 12, . BAC OJ1312... 40 6.0
70emb|AJ009616.3|HSAJ9616 Homo sapiens chromosome 17 sequence from... 40 6.0
71emb|AL732645.4|CNS08C9K Oryza sativa chromosome 12, . BAC OSJNBb... 40 6.0
72emb|AL928758.3|CNS08CBV Oryza sativa chromosome 12, . BAC OSJNBb... 40 6.0
73emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb... 40 6.0
74emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239... 40 6.0
75emb|AL646049.14| Mouse DNA sequence from clone RP23-63A9 on chro... 40 6.0 
>ref|XM_478167.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3174

 Score =  272 bits (137), Expect = 9e-70
 Identities = 258/297 (86%), Gaps = 1/297 (0%)
 Strand = Plus / Plus

                                                                       
Query: 146 gggacccgctcctacgctccgagatccacggcttcatcacctacgcagacttgaacttcg 205
           ||||||||||| |  |||||||||||||||| ||| |||| ||| ||||||||||||  |
Sbjct: 70  gggacccgctcgtcggctccgagatccacggtttcctcacttacccagacttgaactatg 129

                                                                       
Query: 206 agaagctgaaagcagaggccgcgtcgcgctggttccggccgaatgagatctacgcggtcc 265
           ||||||||   || ||||| ||| |||| ||||||||||| ||||||||||||||| |  
Sbjct: 130 agaagctggtggcggaggcggcggcgcggtggttccggcctaatgagatctacgcgatat 189

                                                                       
Query: 266 tggcgaaccacgagaggttcaaggtccatgcacagcccattgacaagcccgtgagtggta 325
           |||||||||||| |||||||||| |||| ||||| ||  | ||||||||||||||||| |
Sbjct: 190 tggcgaaccacgcgaggttcaagatccacgcacaaccggtcgacaagcccgtgagtggaa 249

                                                                       
Query: 326 ctattgttctatatgatcgtaaagttgtccggaactttcggaaggatggccataattgga 385
           || |||||||||||||||||||||| ||| ||||||| || |||||||||||||||||||
Sbjct: 250 ctgttgttctatatgatcgtaaagtagtcaggaacttccgtaaggatggccataattgga 309

                                                                    
Query: 386 agaaaaagaaggatggcaaaactgtccaagaagcgcatg-aaaattaaagattggta 441
           | ||||||||||||||||  || ||||||||||| |||| |||||||||||||||||
Sbjct: 310 aaaaaaagaaggatggcaggacggtccaagaagctcatgaaaaattaaagattggta 366
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>dbj|AK070976.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073E17, full
           insert sequence
          Length = 3174

 Score =  272 bits (137), Expect = 9e-70
 Identities = 258/297 (86%), Gaps = 1/297 (0%)
 Strand = Plus / Plus

                                                                       
Query: 146 gggacccgctcctacgctccgagatccacggcttcatcacctacgcagacttgaacttcg 205
           ||||||||||| |  |||||||||||||||| ||| |||| ||| ||||||||||||  |
Sbjct: 70  gggacccgctcgtcggctccgagatccacggtttcctcacttacccagacttgaactatg 129

                                                                       
Query: 206 agaagctgaaagcagaggccgcgtcgcgctggttccggccgaatgagatctacgcggtcc 265
           ||||||||   || ||||| ||| |||| ||||||||||| ||||||||||||||| |  
Sbjct: 130 agaagctggtggcggaggcggcggcgcggtggttccggcctaatgagatctacgcgatat 189

                                                                       
Query: 266 tggcgaaccacgagaggttcaaggtccatgcacagcccattgacaagcccgtgagtggta 325
           |||||||||||| |||||||||| |||| ||||| ||  | ||||||||||||||||| |
Sbjct: 190 tggcgaaccacgcgaggttcaagatccacgcacaaccggtcgacaagcccgtgagtggaa 249

                                                                       
Query: 326 ctattgttctatatgatcgtaaagttgtccggaactttcggaaggatggccataattgga 385
           || |||||||||||||||||||||| ||| ||||||| || |||||||||||||||||||
Sbjct: 250 ctgttgttctatatgatcgtaaagtagtcaggaacttccgtaaggatggccataattgga 309

                                                                    
Query: 386 agaaaaagaaggatggcaaaactgtccaagaagcgcatg-aaaattaaagattggta 441
           | ||||||||||||||||  || ||||||||||| |||| |||||||||||||||||
Sbjct: 310 aaaaaaagaaggatggcaggacggtccaagaagctcatgaaaaattaaagattggta 366
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>gb|AF499741.1| Oryza sativa CaM-binding transcription factor (CBT) mRNA, complete
           cds
          Length = 3134

 Score =  264 bits (133), Expect = 2e-67
 Identities = 257/297 (86%), Gaps = 1/297 (0%)
 Strand = Plus / Plus

                                                                       
Query: 146 gggacccgctcctacgctccgagatccacggcttcatcacctacgcagacttgaacttcg 205
           ||||||||||| |  |||||||||||||||| ||| |||| ||| ||||||||||||  |
Sbjct: 46  gggacccgctcgtcggctccgagatccacggtttcctcacttacccagacttgaactatg 105

                                                                       
Query: 206 agaagctgaaagcagaggccgcgtcgcgctggttccggccgaatgagatctacgcggtcc 265
           | ||||||   || ||||| ||| |||| ||||||||||| ||||||||||||||| |  
Sbjct: 106 ataagctggtggcggaggcggcggcgcggtggttccggcctaatgagatctacgcgatat 165

                                                                       
Query: 266 tggcgaaccacgagaggttcaaggtccatgcacagcccattgacaagcccgtgagtggta 325
           |||||||||||| |||||||||| |||| ||||| ||  | ||||||||||||||||| |
Sbjct: 166 tggcgaaccacgcgaggttcaagatccacgcacaaccggtcgacaagcccgtgagtggaa 225

                                                                       
Query: 326 ctattgttctatatgatcgtaaagttgtccggaactttcggaaggatggccataattgga 385
           || |||||||||||||||||||||| ||| ||||||| || |||||||||||||||||||
Sbjct: 226 ctgttgttctatatgatcgtaaagtagtcaggaacttccgtaaggatggccataattgga 285

                                                                    
Query: 386 agaaaaagaaggatggcaaaactgtccaagaagcgcatg-aaaattaaagattggta 441
           | ||||||||||||||||  || ||||||||||| |||| |||||||||||||||||
Sbjct: 286 aaaaaaagaaggatggcaggacggtccaagaagctcatgaaaaattaaagattggta 342
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  129 bits (65), Expect = 8e-27
 Identities = 98/109 (89%)
 Strand = Plus / Minus

                                                                            
Query: 320      gtggtactattgttctatatgatcgtaaagttgtccggaactttcggaaggatggccata 379
                |||| ||| |||||||||||||||||||||| ||| ||||||| || |||||||||||||
Sbjct: 18158591 gtggaactgttgttctatatgatcgtaaagtagtcaggaacttccgtaaggatggccata 18158532

                                                                 
Query: 380      attggaagaaaaagaaggatggcaaaactgtccaagaagcgcatgaaaa 428
                ||||||| ||||||||||||||||  || ||||||||||| ||||||||
Sbjct: 18158531 attggaaaaaaaagaaggatggcaggacggtccaagaagctcatgaaaa 18158483



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 110/130 (84%)
 Strand = Plus / Minus

                                                                            
Query: 192      agacttgaacttcgagaagctgaaagcagaggccgcgtcgcgctggttccggccgaatga 251
                |||||||||||  |||||||||   || ||||| ||| |||| ||||||||||| |||||
Sbjct: 18163779 agacttgaactatgagaagctggtggcggaggcggcggcgcggtggttccggcctaatga 18163720

                                                                            
Query: 252      gatctacgcggtcctggcgaaccacgagaggttcaaggtccatgcacagcccattgacaa 311
                |||||||||| |  |||||||||||| |||||||||| |||| ||||| ||  | |||||
Sbjct: 18163719 gatctacgcgatattggcgaaccacgcgaggttcaagatccacgcacaaccggtcgacaa 18163660

                          
Query: 312      gcccgtgagt 321
                ||||||||||
Sbjct: 18163659 gcccgtgagt 18163650



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                        
Query: 146      gggacccgctcctacgctccgagatccacggcttcatcac 185
                ||||||||||| |  |||||||||||||||| ||| ||||
Sbjct: 18164461 gggacccgctcgtcggctccgagatccacggtttcctcac 18164422



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 33       ctcgtcgtcgtcttcttctc 52
                ||||||||||||||||||||
Sbjct: 12405130 ctcgtcgtcgtcttcttctc 12405111
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>dbj|AP005190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0477A12
          Length = 138141

 Score =  129 bits (65), Expect = 8e-27
 Identities = 98/109 (89%)
 Strand = Plus / Minus

                                                                         
Query: 320   gtggtactattgttctatatgatcgtaaagttgtccggaactttcggaaggatggccata 379
             |||| ||| |||||||||||||||||||||| ||| ||||||| || |||||||||||||
Sbjct: 93897 gtggaactgttgttctatatgatcgtaaagtagtcaggaacttccgtaaggatggccata 93838

                                                              
Query: 380   attggaagaaaaagaaggatggcaaaactgtccaagaagcgcatgaaaa 428
             ||||||| ||||||||||||||||  || ||||||||||| ||||||||
Sbjct: 93837 attggaaaaaaaagaaggatggcaggacggtccaagaagctcatgaaaa 93789



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 110/130 (84%)
 Strand = Plus / Minus

                                                                         
Query: 192   agacttgaacttcgagaagctgaaagcagaggccgcgtcgcgctggttccggccgaatga 251
             |||||||||||  |||||||||   || ||||| ||| |||| ||||||||||| |||||
Sbjct: 99085 agacttgaactatgagaagctggtggcggaggcggcggcgcggtggttccggcctaatga 99026

                                                                         
Query: 252   gatctacgcggtcctggcgaaccacgagaggttcaaggtccatgcacagcccattgacaa 311
             |||||||||| |  |||||||||||| |||||||||| |||| ||||| ||  | |||||
Sbjct: 99025 gatctacgcgatattggcgaaccacgcgaggttcaagatccacgcacaaccggtcgacaa 98966

                       
Query: 312   gcccgtgagt 321
             ||||||||||
Sbjct: 98965 gcccgtgagt 98956



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 146   gggacccgctcctacgctccgagatccacggcttcatcac 185
             ||||||||||| |  |||||||||||||||| ||| ||||
Sbjct: 99767 gggacccgctcgtcggctccgagatccacggtttcctcac 99728
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>ref|NM_196150.1| Oryza sativa (japonica cultivar-group) putative calmodulin binding
           protein similar to ER66 (OSJNBa0091J06.19), mRNA
          Length = 3117

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                       
Query: 359 actttcggaaggatggccataattggaagaaaaagaaggatggcaaaactgtccaagaag 418
           ||||| ||||||| ||||||||||||| ||| || |||||||| || |||||| ||||||
Sbjct: 209 actttaggaaggacggccataattggaggaagaaaaaggatggaaagactgtcaaagaag 268

                    
Query: 419 cgcatgaaa 427
           | |||||||
Sbjct: 269 cacatgaaa 277
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>gb|AC113338.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone
              OSJNBa0091J06 from chromosome 10, complete sequence
          Length = 141911

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                          
Query: 359    actttcggaaggatggccataattggaagaaaaagaaggatggcaaaactgtccaagaag 418
              ||||| ||||||| ||||||||||||| ||| || |||||||| || |||||| ||||||
Sbjct: 115048 actttaggaaggacggccataattggaggaagaaaaaggatggaaagactgtcaaagaag 115107

                       
Query: 419    cgcatgaaa 427
              | |||||||
Sbjct: 115108 cacatgaaa 115116
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>gb|AC079935.3| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar
            Nipponbare clone OSJNBa0095C06, from Chromosome 10,
            complete sequence
          Length = 156159

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                        
Query: 359  actttcggaaggatggccataattggaagaaaaagaaggatggcaaaactgtccaagaag 418
            ||||| ||||||| ||||||||||||| ||| || |||||||| || |||||| ||||||
Sbjct: 5970 actttaggaaggacggccataattggaggaagaaaaaggatggaaagactgtcaaagaag 6029

                     
Query: 419  cgcatgaaa 427
            | |||||||
Sbjct: 6030 cacatgaaa 6038
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                            
Query: 359      actttcggaaggatggccataattggaagaaaaagaaggatggcaaaactgtccaagaag 418
                ||||| ||||||| ||||||||||||| ||| || |||||||| || |||||| ||||||
Sbjct: 11421977 actttaggaaggacggccataattggaggaagaaaaaggatggaaagactgtcaaagaag 11422036

                         
Query: 419      cgcatgaaa 427
                | |||||||
Sbjct: 11422037 cacatgaaa 11422045
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>dbj|AK105116.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-H10, full
           insert sequence
          Length = 3510

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                       
Query: 359 actttcggaaggatggccataattggaagaaaaagaaggatggcaaaactgtccaagaag 418
           ||||| ||||||| ||||||||||||| ||| || |||||||| || |||||| ||||||
Sbjct: 393 actttaggaaggacggccataattggaggaagaaaaaggatggaaagactgtcaaagaag 452

                    
Query: 419 cgcatgaaa 427
           | |||||||
Sbjct: 453 cacatgaaa 461
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>dbj|AK101479.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041A20, full
           insert sequence
          Length = 3514

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                       
Query: 359 actttcggaaggatggccataattggaagaaaaagaaggatggcaaaactgtccaagaag 418
           ||||| ||||||| ||||||||||||| ||| || |||||||| || |||||| ||||||
Sbjct: 398 actttaggaaggacggccataattggaggaagaaaaaggatggaaagactgtcaaagaag 457

                    
Query: 419 cgcatgaaa 427
           | |||||||
Sbjct: 458 cacatgaaa 466
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                            
Query: 359      actttcggaaggatggccataattggaagaaaaagaaggatggcaaaactgtccaagaag 418
                ||||| ||||||| ||||||||||||| ||| || |||||||| || |||||| ||||||
Sbjct: 11428417 actttaggaaggacggccataattggaggaagaaaaaggatggaaagactgtcaaagaag 11428476

                         
Query: 419      cgcatgaaa 427
                | |||||||
Sbjct: 11428477 cacatgaaa 11428485
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>gb|AC110576.12| Mus musculus chromosome 8, clone RP23-329K17, complete sequence
          Length = 224141

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 280    aggttcaaggtccatgcacagccc 303
              ||||||||||||||||||||||||
Sbjct: 142694 aggttcaaggtccatgcacagccc 142671
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 56      tcgcctgcctgcgcggcctgaccaa 80
               ||||| |||||||||||||||||||
Sbjct: 1408155 tcgccagcctgcgcggcctgaccaa 1408131
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>gb|AC079853.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBb0004M10, complete sequence
          Length = 152423

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 30   ctgctcgtcgtcgtcttcttc 50
            |||||||||||||||||||||
Sbjct: 6401 ctgctcgtcgtcgtcttcttc 6381
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>ref|XM_959467.1| Neurospora crassa OR74A hypothetical protein (NCU03154.1) partial
           mRNA
          Length = 1638

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 95  aagtggaagcagcagccgcgg 115
           |||||||||||||||||||||
Sbjct: 411 aagtggaagcagcagccgcgg 431
to top
>ref|XM_330589.1| Neurospora crassa OR74A hypothetical protein (NCU03154.1) partial
           mRNA
          Length = 1638

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 95  aagtggaagcagcagccgcgg 115
           |||||||||||||||||||||
Sbjct: 411 aagtggaagcagcagccgcgg 431
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 30       ctgctcgtcgtcgtcttcttc 50
                |||||||||||||||||||||
Sbjct: 15744601 ctgctcgtcgtcgtcttcttc 15744581
to top
>ref|XM_388606.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08430.1)
           partial mRNA
          Length = 2286

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 202 ttcgagaagctgaaagcagaggccg 226
           |||||||||| ||||||||||||||
Sbjct: 76  ttcgagaagcagaaagcagaggccg 100
to top
>gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0041L19, complete sequence
          Length = 155086

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 33    ctcgtcgtcgtcttcttctcc 53
             |||||||||||||||||||||
Sbjct: 21326 ctcgtcgtcgtcttcttctcc 21306
to top
>gb|AC122165.37| Medicago truncatula clone mth2-32m22, complete sequence
          Length = 148586

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 425   aaaattaaagattggtatgaa 445
             |||||||||||||||||||||
Sbjct: 46728 aaaattaaagattggtatgaa 46708
to top
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 56      tcgcctgcctgcgcggcctga 76
               |||||||||||||||||||||
Sbjct: 1614991 tcgcctgcctgcgcggcctga 1615011
to top
>gb|AC097279.5| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genomic sequence, complete
              sequence
          Length = 178748

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 30     ctgctcgtcgtcgtcttcttc 50
              |||||||||||||||||||||
Sbjct: 154555 ctgctcgtcgtcgtcttcttc 154535
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 33       ctcgtcgtcgtcttcttctcc 53
                |||||||||||||||||||||
Sbjct: 24544424 ctcgtcgtcgtcttcttctcc 24544404
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 30       ctgctcgtcgtcgtcttcttc 50
                |||||||||||||||||||||
Sbjct: 15739135 ctgctcgtcgtcgtcttcttc 15739115
to top
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 99      ggaagcagcagccgcggcggc 119
               |||||||||||||||||||||
Sbjct: 2423723 ggaagcagcagccgcggcggc 2423743



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 24      cttttcctgctcgtcgtcgtc 44
               |||||||||||||||||||||
Sbjct: 2310332 cttttcctgctcgtcgtcgtc 2310312
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 33       ctcgtcgtcgtcttcttctcc 53
                |||||||||||||||||||||
Sbjct: 24856094 ctcgtcgtcgtcttcttctcc 24856074
to top
>gb|AC102288.11| Mus musculus chromosome 18, clone RP24-346H24, complete sequence
          Length = 154552

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    tcgtcgtcgtcttcttctcc 53
             ||||||||||||||||||||
Sbjct: 13247 tcgtcgtcgtcttcttctcc 13228
to top
>gb|BC107772.1| Homo sapiens cDNA clone MGC:104216 IMAGE:6451988, complete cds
          Length = 1065

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 100 gaagcagcagccgcggcggc 119
           ||||||||||||||||||||
Sbjct: 40  gaagcagcagccgcggcggc 59
to top
>gb|BC052105.1| Danio rerio zgc:56402, mRNA (cDNA clone MGC:56402 IMAGE:5605173),
           complete cds
          Length = 1819

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 197 tgaacttcgagaagctgaaa 216
           ||||||||||||||||||||
Sbjct: 694 tgaacttcgagaagctgaaa 713
to top
>gb|AC122895.5| Mus musculus BAC clone RP23-69K14 from chromosome 18, complete sequence
          Length = 215539

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 28     tcctgctcgtcgtcgtcttcttct 51
              |||| |||||||||||||||||||
Sbjct: 114122 tcctcctcgtcgtcgtcttcttct 114099



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 28     tcctgctcgtcgtcgtcttcttct 51
              |||| |||||||||||||||||||
Sbjct: 113839 tcctcctcgtcgtcgtcttcttct 113816
to top
>gb|BC068996.1| Homo sapiens nuclear receptor co-repressor 1, mRNA (cDNA clone
           IMAGE:5474358), partial cds
          Length = 1808

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 100 gaagcagcagccgcggcggc 119
           ||||||||||||||||||||
Sbjct: 24  gaagcagcagccgcggcggc 43
to top
>gb|AC160963.2| Mus musculus BAC clone RP24-311B3 from chromosome 12, complete sequence
          Length = 155386

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 28    tcctgctcgtcgtcgtcttcttct 51
             |||| |||||||||||||||||||
Sbjct: 83674 tcctcctcgtcgtcgtcttcttct 83651
to top
>gb|AC142227.3| Mus musculus BAC clone RP24-115G21 from chromosome 12, complete
             sequence
          Length = 154904

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    tcgtcgtcgtcttcttctcc 53
             ||||||||||||||||||||
Sbjct: 80523 tcgtcgtcgtcttcttctcc 80542
to top
>gb|AC125320.4| Mus musculus BAC clone RP23-351P13 from chromosome 15, complete sequence
          Length = 229480

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 376    cataattggaagaaaaagaa 395
              ||||||||||||||||||||
Sbjct: 103499 cataattggaagaaaaagaa 103518
to top
>gb|BC035748.1| Homo sapiens nuclear receptor co-repressor 1, mRNA (cDNA clone
           IMAGE:5749816), with apparent retained intron
          Length = 1850

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 100 gaagcagcagccgcggcggc 119
           ||||||||||||||||||||
Sbjct: 6   gaagcagcagccgcggcggc 25
to top
>gb|BC050594.2| Homo sapiens nuclear receptor co-repressor 1, mRNA (cDNA clone
           IMAGE:6024800), partial cds
          Length = 1891

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 100 gaagcagcagccgcggcggc 119
           ||||||||||||||||||||
Sbjct: 24  gaagcagcagccgcggcggc 43
to top
>gb|BC058511.1| Homo sapiens nuclear receptor co-repressor 1, mRNA (cDNA clone
           IMAGE:5190073), partial cds
          Length = 1850

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 100 gaagcagcagccgcggcggc 119
           ||||||||||||||||||||
Sbjct: 29  gaagcagcagccgcggcggc 48
to top
>gb|AC163108.5| Mus musculus BAC clone RP23-46L17 from chromosome 6, complete sequence
          Length = 234330

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 6     tttttccttttctaaggtcttttc 29
             ||||||||||||||||||| ||||
Sbjct: 97142 tttttccttttctaaggtcatttc 97119
to top
>gb|BC026028.1| Homo sapiens nuclear receptor co-repressor 1, mRNA (cDNA clone
           IMAGE:3836580), containing frame-shift errors
          Length = 1966

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 100 gaagcagcagccgcggcggc 119
           ||||||||||||||||||||
Sbjct: 7   gaagcagcagccgcggcggc 26
to top
>gb|AC161175.5| Mus musculus chromosome 18, clone RP23-2J13, complete sequence
          Length = 225231

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     tcgtcgtcgtcttcttctcc 53
              ||||||||||||||||||||
Sbjct: 179547 tcgtcgtcgtcttcttctcc 179528
to top
>emb|AL603708.13| Mouse DNA sequence from clone RP23-381C21 on chromosome 11, complete
              sequence
          Length = 198743

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 92     ggaaagtggaagcagcagcc 111
              ||||||||||||||||||||
Sbjct: 109750 ggaaagtggaagcagcagcc 109769
to top
>emb|AL844607.4| Mouse DNA sequence from clone RP24-280G18 on chromosome 4, complete
             sequence
          Length = 160298

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 382   tggaagaaaaagaaggatggcaaa 405
             |||||||| |||||||||||||||
Sbjct: 85086 tggaagaacaagaaggatggcaaa 85109
to top
>gb|AC115889.13| Mus musculus chromosome 3, clone RP24-409N2, complete sequence
          Length = 166218

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    tcgtcgtcgtcttcttctcc 53
             ||||||||||||||||||||
Sbjct: 65019 tcgtcgtcgtcttcttctcc 65000
to top
>gb|AC009986.10| Homo sapiens chromosome 10 clone RP11-346D6, complete sequence
          Length = 181733

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 423    tgaaaattaaagattggtat 442
              ||||||||||||||||||||
Sbjct: 127855 tgaaaattaaagattggtat 127874
to top
>gb|AC105426.4| Homo sapiens BAC clone RP11-794N18 from 4, complete sequence
          Length = 55775

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     atttttccttttctaaggtc 24
             ||||||||||||||||||||
Sbjct: 20363 atttttccttttctaaggtc 20344
to top
>gb|AC105288.3| Homo sapiens BAC clone RP11-554F9 from 4, complete sequence
          Length = 142915

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    aagcagcagccgcggcggct 120
              ||||||||||||||||||||
Sbjct: 123682 aagcagcagccgcggcggct 123663
to top
>ref|XM_943989.1| PREDICTED: Homo sapiens hypothetical protein LOC649947 (LOC649947),
           mRNA
          Length = 486

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 100 gaagcagcagccgcggcggc 119
           ||||||||||||||||||||
Sbjct: 421 gaagcagcagccgcggcggc 402
to top
>gb|AC025882.7| Homo sapiens chromosome 17, clone RP11-445F12, complete sequence
          Length = 181991

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 92    ggaaagtggaagcagcagcc 111
             ||||||||||||||||||||
Sbjct: 49907 ggaaagtggaagcagcagcc 49926
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 420      gcatgaaaattaaagattgg 439
                ||||||||||||||||||||
Sbjct: 14343343 gcatgaaaattaaagattgg 14343362



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 30      ctgctcgtcgtcgtcttcttctcc 53
               |||||| |||||||||||||||||
Sbjct: 2842256 ctgctcctcgtcgtcttcttctcc 2842279



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 35      cgtcgtcgtcttcttctcca 54
               ||||||||||||||||||||
Sbjct: 1999065 cgtcgtcgtcttcttctcca 1999084



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 34      tcgtcgtcgtcttcttctcc 53
               ||||||||||||||||||||
Sbjct: 1750985 tcgtcgtcgtcttcttctcc 1751004
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 388      aaaaagaaggatggcaaaac 407
                ||||||||||||||||||||
Sbjct: 19935504 aaaaagaaggatggcaaaac 19935523
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 28       tcctgctcgtcgtcgtcttcttct 51
                |||| |||||||||||||||||||
Sbjct: 35248591 tcctcctcgtcgtcgtcttcttct 35248614
to top
>dbj|AB219939.1| Lycopersicon esculentum LeHSP110/ClpB mRNA for heat shock protein,
           complete cds
          Length = 3144

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 379 aattggaagaaaaagaaggatggcaaaactgt 410
           ||||||||||| ||||||||  ||||||||||
Sbjct: 85  aattggaagaagaagaaggaacgcaaaactgt 54
to top
>ref|NM_200324.1| Danio rerio zgc:56402 (zgc:56402), mRNA
          Length = 1819

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 197 tgaacttcgagaagctgaaa 216
           ||||||||||||||||||||
Sbjct: 694 tgaacttcgagaagctgaaa 713
to top
>gb|AF247458.1|AF247458 Coptotermes formosanus clone Cf4:1A2-4 microsatellite sequence
          Length = 535

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 34  tcgtcgtcgtcttcttctcc 53
           ||||||||||||||||||||
Sbjct: 346 tcgtcgtcgtcttcttctcc 365
to top
>gb|AC140052.4| Mus musculus BAC clone RP23-346E11 from chromosome 15, complete
            sequence
          Length = 210091

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 376  cataattggaagaaaaagaa 395
            ||||||||||||||||||||
Sbjct: 6088 cataattggaagaaaaagaa 6069
to top
>dbj|AP004809.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1018E06
          Length = 178499

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 388   aaaaagaaggatggcaaaac 407
             ||||||||||||||||||||
Sbjct: 73844 aaaaagaaggatggcaaaac 73863
to top
>dbj|AP005462.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0613B07
          Length = 191756

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    ctcgtcgtcgtcttcttctc 52
             ||||||||||||||||||||
Sbjct: 49412 ctcgtcgtcgtcttcttctc 49393
to top
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0474F11
          Length = 139544

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 28    tcctgctcgtcgtcgtcttcttct 51
             |||| |||||||||||||||||||
Sbjct: 60641 tcctcctcgtcgtcgtcttcttct 60664
to top
>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1202_E07
          Length = 145014

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 28     tcctgctcgtcgtcgtcttcttct 51
              |||| |||||||||||||||||||
Sbjct: 143947 tcctcctcgtcgtcgtcttcttct 143970
to top
>emb|BX545911.3| Mouse DNA sequence from clone RP24-319P20 on chromosome 4, complete
             sequence
          Length = 49562

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    tcgtcgtcgtcttcttctcc 53
             ||||||||||||||||||||
Sbjct: 39898 tcgtcgtcgtcttcttctcc 39917
to top
>emb|BX666064.10| Zebrafish DNA sequence from clone DKEY-6N3 in linkage group 22, complete
              sequence
          Length = 156234

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 197    tgaacttcgagaagctgaaa 216
              ||||||||||||||||||||
Sbjct: 143199 tgaacttcgagaagctgaaa 143180
to top
>gb|AC005971.5|AC005971 Homo sapiens chromosome 17, clone hRPK.651_L_9, complete sequence
          Length = 192307

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    gaagcagcagccgcggcggc 119
              ||||||||||||||||||||
Sbjct: 144207 gaagcagcagccgcggcggc 144226
to top
>gb|AC167667.4| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940123D9, complete sequence
          Length = 121336

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 28    tcctgctcgtcgtcgtcttcttct 51
             ||||||||||||||||| ||||||
Sbjct: 38506 tcctgctcgtcgtcgtcctcttct 38483
to top
>ref|NM_006311.2| Homo sapiens nuclear receptor co-repressor 1 (NCOR1), mRNA
          Length = 7940

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 100 gaagcagcagccgcggcggc 119
           ||||||||||||||||||||
Sbjct: 23  gaagcagcagccgcggcggc 42
to top
>gb|AF044209.1|AF044209 Homo sapiens nuclear receptor co-repressor N-CoR mRNA, complete cds
          Length = 7940

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 100 gaagcagcagccgcggcggc 119
           ||||||||||||||||||||
Sbjct: 23  gaagcagcagccgcggcggc 42
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 420      gcatgaaaattaaagattgg 439
                ||||||||||||||||||||
Sbjct: 14297625 gcatgaaaattaaagattgg 14297644



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 30      ctgctcgtcgtcgtcttcttctcc 53
               |||||| |||||||||||||||||
Sbjct: 2842200 ctgctcctcgtcgtcttcttctcc 2842223



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 35      cgtcgtcgtcttcttctcca 54
               ||||||||||||||||||||
Sbjct: 1999016 cgtcgtcgtcttcttctcca 1999035



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 34      tcgtcgtcgtcttcttctcc 53
               ||||||||||||||||||||
Sbjct: 1750962 tcgtcgtcgtcttcttctcc 1750981
to top
>emb|AL928783.4|CNS08CCD Oryza sativa chromosome 12, . BAC OSJNBa0028B04 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 158885

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    cgtcgtcgtcttcttctcca 54
             ||||||||||||||||||||
Sbjct: 29958 cgtcgtcgtcttcttctcca 29977
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>emb|AL731749.3|CNS08C7Y Oryza sativa chromosome 12, . BAC OJ1312_H10 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 141067

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 420    gcatgaaaattaaagattgg 439
              ||||||||||||||||||||
Sbjct: 138961 gcatgaaaattaaagattgg 138980
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>emb|AJ009616.3|HSAJ9616 Homo sapiens chromosome 17 sequence from PAC RP1-188B3 region
             D17S842-D17S953 map 17p11.2, complete sequence
          Length = 81514

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 100   gaagcagcagccgcggcggc 119
             ||||||||||||||||||||
Sbjct: 17921 gaagcagcagccgcggcggc 17940
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>emb|AL732645.4|CNS08C9K Oryza sativa chromosome 12, . BAC OSJNBb0090H23 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 134370

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 420   gcatgaaaattaaagattgg 439
             ||||||||||||||||||||
Sbjct: 50547 gcatgaaaattaaagattgg 50566
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>emb|AL928758.3|CNS08CBV Oryza sativa chromosome 12, . BAC OSJNBb0075N21 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 145539

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 30    ctgctcgtcgtcgtcttcttctcc 53
             |||||| |||||||||||||||||
Sbjct: 28191 ctgctcctcgtcgtcttcttctcc 28168
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>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 132026

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    tcgtcgtcgtcttcttctcc 53
             ||||||||||||||||||||
Sbjct: 89498 tcgtcgtcgtcttcttctcc 89479
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>emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239_F07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 104307

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    tcgtcgtcgtcttcttctcc 53
             ||||||||||||||||||||
Sbjct: 15936 tcgtcgtcgtcttcttctcc 15917
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>emb|AL646049.14| Mouse DNA sequence from clone RP23-63A9 on chromosome X, complete
              sequence
          Length = 146105

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     tcgtcgtcgtcttcttctcc 53
              ||||||||||||||||||||
Sbjct: 125096 tcgtcgtcgtcttcttctcc 125077


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,893,744
Number of Sequences: 3902068
Number of extensions: 4893744
Number of successful extensions: 136180
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 135243
Number of HSP's gapped (non-prelim): 933
length of query: 446
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 424
effective length of database: 17,147,199,772
effective search space: 7270412703328
effective search space used: 7270412703328
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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