>AKH2_MAIZE (P49080) Bifunctional aspartokinase/homoserine dehydrogenase 2,|
           chloroplast precursor (AK-HD 2) (AK-HSDH 2) [Includes:
           Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC
           1.1.1.3)]
          Length = 917

 Score =  121 bits (304), Expect = 6e-28
 Identities = 68/120 (56%), Positives = 80/120 (66%), Gaps = 5/120 (4%)
 Frame = +1

Query: 73  MRSLAVASPVPTAAAHRR-RLRPSASGREVISQCLKCEINQDRPLGA-LRLG---GNLPR 237
           M+ LAV+  +P AAA  R R R S+S RE + QC K E++QD  LG  LR+G   G+L R
Sbjct: 1   MQGLAVSCQLPPAAAAARWRPRASSSNREAVLQCWKYELSQDHYLGGPLRIGQSQGSLHR 60

Query: 238 HGSKNLLTPXXXXXXXXXXXXXTYLPKGDMWSVHKFGGTCMGTPQRIQNVADVVLGDSSE 417
           H S N L P             TYLPKGDMWSVHKFGGTCMGTP+RIQ VA++VLGDSSE
Sbjct: 61  HRSTNFLRPAAAAISVEQDEVNTYLPKGDMWSVHKFGGTCMGTPKRIQCVANIVLGDSSE 120

>AKH1_MAIZE (P49079) Bifunctional aspartokinase/homoserine dehydrogenase 1,|
           chloroplast precursor (AK-HD 1) (AK-HSDH 1) [Includes:
           Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC
           1.1.1.3)]
          Length = 920

 Score =  101 bits (252), Expect = 6e-22
 Identities = 62/123 (50%), Positives = 70/123 (56%), Gaps = 8/123 (6%)
 Frame = +1

Query: 73  MRSLAVASPVPTAAAHRRR---LRPSASGRE-VISQCLKCEINQDRPLGALRLGGNLPR- 237
           MRSL VAS  P AA   RR   L P+A+GR+    +C + E  QD   G+      LPR 
Sbjct: 1   MRSLTVASRHPGAAFSTRRRPLLHPAAAGRDSTFQRCWRWEKTQDSSFGSSLRTSRLPRT 60

Query: 238 -HGS--KNLLTPXXXXXXXXXXXXXTYLPKGDMWSVHKFGGTCMGTPQRIQNVADVVLGD 408
            HG   KNLL P               LPKGDMWSVHKFGGTCMGT +RI NVAD+VL D
Sbjct: 61  VHGDILKNLLAPTAGAVSVEQAEAIADLPKGDMWSVHKFGGTCMGTSERIHNVADIVLRD 120

Query: 409 SSE 417
            SE
Sbjct: 121 PSE 123

>AKH_DAUCA (P37142) Bifunctional aspartokinase/homoserine dehydrogenase,|
           chloroplast precursor (AK-HD) (AK-HSDH) [Includes:
           Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC
           1.1.1.3)] (Fragment)
          Length = 921

 Score = 59.7 bits (143), Expect = 3e-09
 Identities = 23/37 (62%), Positives = 33/37 (89%)
 Frame = +1

Query: 307 YLPKGDMWSVHKFGGTCMGTPQRIQNVADVVLGDSSE 417
           +LP+G MWS+HKFGGTC+G+ +RI+NVA++V+ D SE
Sbjct: 85  HLPRGAMWSIHKFGGTCVGSSERIRNVAEIVVEDDSE 121

>IF2_CORGL (Q8NP40) Translation initiation factor IF-2|
          Length = 1004

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -3

Query: 153 PAGGGRPEPPSMGGGCRDGARDGE 82
           P GG RP+     GG RDG RDG+
Sbjct: 233 PGGGPRPQGQGRPGGQRDGQRDGQ 256

>AK_HELPY (O25827) Aspartokinase (EC 2.7.2.4) (Aspartate kinase)|
          Length = 405

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = +1

Query: 325 MWSVHKFGGTCMGTPQRIQNVADVVL 402
           M  V K+GGT MG+ +RI NVA  VL
Sbjct: 1   MLIVQKYGGTSMGSIERIHNVAQRVL 26

>AK_HELPJ (Q9ZJZ7) Aspartokinase (EC 2.7.2.4) (Aspartate kinase)|
          Length = 405

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = +1

Query: 325 MWSVHKFGGTCMGTPQRIQNVADVVL 402
           M  V K+GGT MG+ +RI NVA  VL
Sbjct: 1   MLIVQKYGGTSMGSIERIHNVAQRVL 26

>NNMT_HUMAN (P40261) Nicotinamide N-methyltransferase (EC 2.1.1.1)|
          Length = 264

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +1

Query: 151 REVISQCLKCEINQDRPLGALRL 219
           R+ + Q LKC++ Q +PLGA+ L
Sbjct: 132 RQAVKQVLKCDVTQSQPLGAVPL 154

>SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich|
           (Polypyrimidine tract-binding protein-associated
           splicing factor) (PTB-associated splicing factor) (PSF)
           (DNA-binding p52/p100 complex, 100 kDa subunit)
          Length = 699

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -3

Query: 150 AGGGRPEPPSMGGGCRDGARDGEAPH 73
           A GG P+PP  GGG   G R   AP+
Sbjct: 218 APGGHPKPPHRGGGEPRGGRQHHAPY 243

>AK_PSEAE (O69077) Aspartokinase (EC 2.7.2.4) (Aspartate kinase)|
          Length = 412

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +1

Query: 334 VHKFGGTCMGTPQRIQNVADVV 399
           V KFGGT +GT +RI+ VA+ V
Sbjct: 5   VQKFGGTSVGTVERIEQVAEKV 26

>AK2_BACST (P53553) Aspartokinase 2 (EC 2.7.2.4) (Aspartokinase II) (Aspartate|
           kinase 2) [Contains: Aspartokinase II alpha subunit;
           Aspartokinase II beta subunit]
          Length = 407

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 13/23 (56%), Positives = 19/23 (82%)
 Frame = +1

Query: 334 VHKFGGTCMGTPQRIQNVADVVL 402
           V KFGGT +G+ +RIQ+VA+ V+
Sbjct: 5   VQKFGGTSVGSIERIQHVANRVI 27

>AK2_BACSG (Q59229) Aspartokinase 2 (EC 2.7.2.4) (Aspartokinase II) (Aspartate|
           kinase 2) [Contains: Aspartokinase II alpha subunit;
           Aspartokinase II beta subunit]
          Length = 411

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = +1

Query: 334 VHKFGGTCMGTPQRIQNVADVVL 402
           V KFGGT +G+ +RI NVA+ V+
Sbjct: 5   VQKFGGTSVGSVERILNVANRVI 27

>AK2_BACSU (P08495) Aspartokinase 2 (EC 2.7.2.4) (Aspartokinase II) (Aspartate|
           kinase 2) [Contains: Aspartokinase II alpha subunit;
           Aspartokinase II beta subunit]
          Length = 408

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +1

Query: 334 VHKFGGTCMGTPQRIQNVADVVLGDSSE 417
           V KFGGT +G+ ++IQN A+  + +  +
Sbjct: 5   VQKFGGTSVGSVEKIQNAANRAIAEKQK 32

>NNMT_MOUSE (O55239) Nicotinamide N-methyltransferase (EC 2.1.1.1)|
          Length = 264

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 151 REVISQCLKCEINQDRPLGALRL 219
           R  I Q LKC++ Q +PLG + L
Sbjct: 132 RRAIKQVLKCDVTQSQPLGGVSL 154

>VGLY_PIARV (P03540) Glycoprotein polyprotein [Contains: Glycoprotein G1;|
           Glycoprotein G2]
          Length = 503

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +2

Query: 221 EEICQDMVLRICSHQLLQPFQLNKLKSVLIFQKVICGLCTSSVAL 355
           EE C  M L   +   ++  QLN   S+ +F+K I GL + S+ +
Sbjct: 321 EEFCDTMRLFDFNQNAIKTLQLNVENSLNLFKKTINGLISDSLVI 365

>VP4A_FOWPV (Q9J559) Major core protein P4a|
          Length = 891

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -3

Query: 411 RVTKNYISNILNSLRCSHASATELVHRPH 325
           RV+K Y++N+L    CS + A +L+   H
Sbjct: 555 RVSKRYLTNMLQKASCSQSEAEKLLSSAH 583

>SRR1L_MOUSE (Q8K2M3) SRR1-like protein (Fragment)|
          Length = 243

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 14/62 (22%)
 Frame = +1

Query: 91  ASPVPTAAAHRRRLRPS----------ASGREVISQCLKCEINQDRP----LGALRLGGN 228
           A P     A  RRLR +          +S  E I++CL+ ++ Q +P    LG L LG +
Sbjct: 27  AEPDADGEAVLRRLREAEEDLRISDFCSSALETITECLRKQLEQLQPLTEALGRLHLGSS 86

Query: 229 LP 234
           LP
Sbjct: 87  LP 88

>MEC10_CAEEL (P34886) Degenerin mec-10 (Mechanosensory abnormality protein 10)|
          Length = 724

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
 Frame = -2

Query: 412 KSHQELHQQHS----EFSEVFPCKCHRTCAQTTY 323
           K+H+E  ++H+    E    F C+C + C QT Y
Sbjct: 576 KNHRECLEKHTHQIGEIHGSFKCRCQQPCNQTIY 609

>LIP2_GEOCN (P22394) Lipase 2 precursor (EC 3.1.1.3) (Lipase II) (GCL II)|
          Length = 563

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
 Frame = +1

Query: 76  RSLAVASPVPTAAAHRRRLRPSASGREVISQCLKCEIN-------QDRPLGALRLGGNLP 234
           +SL +A+ V  A    +  RPS +G EVIS  L+ +++        D PL  LR     P
Sbjct: 4   KSLFLAAAVNLAGVLAQAPRPSLNGNEVISGVLEGKVDTFKGIPFADPPLNDLRFKHPQP 63

Query: 235 RHGS 246
             GS
Sbjct: 64  FTGS 67


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,211,740
Number of Sequences: 219361
Number of extensions: 829016
Number of successful extensions: 2541
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2538
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)