ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl26d04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_507047.1| PREDICTED Oryza sativa (japonica cultivar-group... 60 7e-06
2ref|XM_468396.1| Oryza sativa (japonica cultivar-group), mRNA 60 7e-06
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
4dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
5dbj|AK101167.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 7e-06
6dbj|AK100544.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 7e-06
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.11
8gb|AC121868.2| Mus musculus BAC clone RP24-116H17 from 1, comple... 46 0.11
9gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa... 46 0.11
10emb|AL731581.2|OSJN00228 Oryza sativa genomic DNA, chromosome 4,... 46 0.11
11gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genom... 46 0.11
12dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
14dbj|AK105468.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
15dbj|AK101854.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
16gb|AC142408.3| Mus musculus BAC clone RP24-342F15 from 1, comple... 46 0.11
17dbj|AB038234.1| Oryza sativa cycH-1 mRNA for cyclin H-1, complet... 46 0.11
18ref|XM_464296.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.7
19ref|XM_583700.2| PREDICTED: Bos taurus similar to Absent in mela... 42 1.7
20emb|AL021921.1|HS357I16 Human DNA sequence from clone RP3-357I16... 42 1.7
21ref|NM_061100.1| Caenorhabditis elegans F49B2.4 (F49B2.4) mRNA, ... 42 1.7
22gb|AC012671.7| Homo sapiens BAC clone RP11-554H10 from 2, comple... 42 1.7
23gb|AC104081.2| Homo sapiens BAC clone RP11-559A1 from 2, complet... 42 1.7
24dbj|AP004113.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
25dbj|AP004836.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
26gb|U95738.1|HSU95738 Human chromosome 16p13.11 BAC clone CIT987S... 42 1.7
27gb|U13051.1|FSU13051 Nectria haematococca pectate lyase B (pelB)... 42 1.7
28emb|Z81543.1|CEF49B2 Caenorhabditis elegans Cosmid F49B2, comple... 42 1.7
29gb|AC107786.14| Mus musculus chromosome 5, clone RP23-5E3, compl... 40 6.7
30gb|AC113533.14| Mus musculus chromosome 5, clone RP23-52A21, com... 40 6.7
31gb|AC123678.19| Mus musculus chromosome 3, clone RP23-276A22, co... 40 6.7
32gb|AE014314.1| Homo sapiens chromosome 13q34 schizophrenia regio... 40 6.7
33emb|AL450333.13| Human DNA sequence from clone RP11-25O6 on chro... 40 6.7
34emb|AL138701.16| Human DNA sequence from clone RP11-406G20 on ch... 40 6.7
35emb|AL732621.11| Mouse DNA sequence from clone RP23-299D17 on ch... 40 6.7
36gb|AC022027.7| Homo sapiens chromosome 10 clone RP11-59J5, compl... 40 6.7
37gb|AC096886.2| Homo sapiens chromosome 3 clone RP11-3F4, complet... 40 6.7
38dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
39gb|AC009460.4|AC009460 Drosophila melanogaster, chromosome 2R, r... 40 6.7
40gb|AC107863.9| Mus musculus chromosome 3, clone RP23-383E14, com... 40 6.7
41dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 40 6.7
42dbj|AP004615.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
43gb|AE003463.2| Drosophila melanogaster chromosome 2R, section 70... 40 6.7
44gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome 40 6.7
45gb|AC130716.3| Mus musculus BAC clone RP23-463B12 from 3, comple... 40 6.7 
>ref|XM_507047.1| PREDICTED Oryza sativa (japonica cultivar-group), P0643F09.17 mRNA
          Length = 3579

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 46/50 (92%), Gaps = 1/50 (2%)
 Strand = Plus / Plus

                                                             
Query: 436 agatgaaaggggctcaggataggaagcagaagaag-agcaggacctgcag 484
           |||||| ||||| ||| |||||||||||||||||| ||||||||||||||
Sbjct: 636 agatgagaggggttcaagataggaagcagaagaagaagcaggacctgcag 685
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>ref|XM_468396.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3363

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 46/50 (92%), Gaps = 1/50 (2%)
 Strand = Plus / Plus

                                                             
Query: 436 agatgaaaggggctcaggataggaagcagaagaag-agcaggacctgcag 484
           |||||| ||||| ||| |||||||||||||||||| ||||||||||||||
Sbjct: 404 agatgagaggggttcaagataggaagcagaagaagaagcaggacctgcag 453
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 46/50 (92%), Gaps = 1/50 (2%)
 Strand = Plus / Plus

                                                                  
Query: 436      agatgaaaggggctcaggataggaagcagaagaag-agcaggacctgcag 484
                |||||| ||||| ||| |||||||||||||||||| ||||||||||||||
Sbjct: 35011569 agatgagaggggttcaagataggaagcagaagaagaagcaggacctgcag 35011618



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 104     cgccgccgtcgctctcgcagttgcc 128
               ||||||||||| |||||||||||||
Sbjct: 3909692 cgccgccgtcgatctcgcagttgcc 3909668
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>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0643F09
          Length = 161001

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 46/50 (92%), Gaps = 1/50 (2%)
 Strand = Plus / Plus

                                                               
Query: 436   agatgaaaggggctcaggataggaagcagaagaag-agcaggacctgcag 484
             |||||| ||||| ||| |||||||||||||||||| ||||||||||||||
Sbjct: 71910 agatgagaggggttcaagataggaagcagaagaagaagcaggacctgcag 71959
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>dbj|AK101167.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028I16, full
           insert sequence
          Length = 3363

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 46/50 (92%), Gaps = 1/50 (2%)
 Strand = Plus / Plus

                                                             
Query: 436 agatgaaaggggctcaggataggaagcagaagaag-agcaggacctgcag 484
           |||||| ||||| ||| |||||||||||||||||| ||||||||||||||
Sbjct: 404 agatgagaggggttcaagataggaagcagaagaagaagcaggacctgcag 453
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>dbj|AK100544.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102M09, full
           insert sequence
          Length = 3578

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 46/50 (92%), Gaps = 1/50 (2%)
 Strand = Plus / Plus

                                                             
Query: 436 agatgaaaggggctcaggataggaagcagaagaag-agcaggacctgcag 484
           |||||| ||||| ||| |||||||||||||||||| ||||||||||||||
Sbjct: 635 agatgagaggggttcaagataggaagcagaagaagaagcaggacctgcag 684
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 107      cgccgtcgctctcgcagttgccgccgc 133
                ||||| |||||||||||||||||||||
Sbjct: 29943619 cgccggcgctctcgcagttgccgccgc 29943645
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>gb|AC121868.2| Mus musculus BAC clone RP24-116H17 from 1, complete sequence
          Length = 209039

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 22    attttctatttttatccttcacc 44
             |||||||||||||||||||||||
Sbjct: 26493 attttctatttttatccttcacc 26471
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>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete
             sequence
          Length = 159661

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 107   cgccgtcgctctcgcagttgccgccgc 133
             ||||| |||||||||||||||||||||
Sbjct: 66987 cgccggcgctctcgcagttgccgccgc 66961
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>emb|AL731581.2|OSJN00228 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0022F16,
             complete sequence
          Length = 154397

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 103   gcgccgccgtcgctctcgcagttgccgccgc 133
             |||||||||||||| |||| |||||||||||
Sbjct: 79145 gcgccgccgtcgctatcgccgttgccgccgc 79115
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>gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genomic sequence, complete
              sequence
          Length = 139946

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 107    cgccgtcgctctcgcagttgccgccgc 133
              ||||| |||||||||||||||||||||
Sbjct: 109560 cgccggcgctctcgcagttgccgccgc 109586
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                              
Query: 103     gcgccgccgtcgctctcgcagttgccgccgc 133
               |||||||||||||| |||| |||||||||||
Sbjct: 3969830 gcgccgccgtcgctatcgccgttgccgccgc 3969800
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 107      cgccgtcgctctcgcagttgccgccgc 133
                ||||| |||||||||||||||||||||
Sbjct: 30035041 cgccggcgctctcgcagttgccgccgc 30035067
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>dbj|AK105468.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-126-A06, full
           insert sequence
          Length = 1627

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 107 cgccgtcgctctcgcagttgccgccgc 133
           ||||| |||||||||||||||||||||
Sbjct: 38  cgccggcgctctcgcagttgccgccgc 64
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>dbj|AK101854.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069N12, full
           insert sequence
          Length = 1931

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 107 cgccgtcgctctcgcagttgccgccgc 133
           ||||| |||||||||||||||||||||
Sbjct: 37  cgccggcgctctcgcagttgccgccgc 63
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>gb|AC142408.3| Mus musculus BAC clone RP24-342F15 from 1, complete sequence
          Length = 162423

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 22    attttctatttttatccttcacc 44
             |||||||||||||||||||||||
Sbjct: 91840 attttctatttttatccttcacc 91862
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>dbj|AB038234.1| Oryza sativa cycH-1 mRNA for cyclin H-1, complete cds
          Length = 1593

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 107 cgccgtcgctctcgcagttgccgccgc 133
           ||||| |||||||||||||||||||||
Sbjct: 20  cgccggcgctctcgcagttgccgccgc 46
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>ref|XM_464296.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 282

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 104 cgccgccgtcgctctcgcagttgcc 128
           ||||||||||| |||||||||||||
Sbjct: 136 cgccgccgtcgatctcgcagttgcc 112
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>ref|XM_583700.2| PREDICTED: Bos taurus similar to Absent in melanoma 1 protein
            (LOC507142), mRNA
          Length = 5940

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 401  ccagtggttccgaggtggggg 421
            |||||||||||||||||||||
Sbjct: 3730 ccagtggttccgaggtggggg 3710
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>emb|AL021921.1|HS357I16 Human DNA sequence from clone RP3-357I16 on chromosome 1p36.13,
             complete sequence
          Length = 134506

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 220   ccgggcagggaatcccccacctttc 244
             ||||| |||||||||||||||||||
Sbjct: 23567 ccgggtagggaatcccccacctttc 23543
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>ref|NM_061100.1| Caenorhabditis elegans F49B2.4 (F49B2.4) mRNA, complete cds
          Length = 378

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 447 gctcaggataggaagcagaagaaga 471
           ||||||||||||||| |||||||||
Sbjct: 328 gctcaggataggaagaagaagaaga 352
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>gb|AC012671.7| Homo sapiens BAC clone RP11-554H10 from 2, complete sequence
          Length = 198694

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 24    tttctatttttatccttcacc 44
             |||||||||||||||||||||
Sbjct: 38259 tttctatttttatccttcacc 38279
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>gb|AC104081.2| Homo sapiens BAC clone RP11-559A1 from 2, complete sequence
          Length = 142118

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 24     tttctatttttatccttcacc 44
              |||||||||||||||||||||
Sbjct: 100724 tttctatttttatccttcacc 100744
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>dbj|AP004113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1116_A06
          Length = 176062

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 104    cgccgccgtcgctctcgcagttgcc 128
              ||||||||||| |||||||||||||
Sbjct: 166024 cgccgccgtcgatctcgcagttgcc 166000
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>dbj|AP004836.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0030G02
          Length = 187265

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 104    cgccgccgtcgctctcgcagttgcc 128
              ||||||||||| |||||||||||||
Sbjct: 108163 cgccgccgtcgatctcgcagttgcc 108139
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>gb|U95738.1|HSU95738 Human chromosome 16p13.11 BAC clone CIT987SK-29B12 complete sequence
          Length = 171368

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 220    ccgggcagggaatcccccacctttc 244
              ||||| |||||||||||||||||||
Sbjct: 122363 ccgggtagggaatcccccacctttc 122387
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>gb|U13051.1|FSU13051 Nectria haematococca pectate lyase B (pelB) gene, complete cds
          Length = 2646

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 98   tccgggcgccgccgtcgctctcgcagttgccgc 130
            |||||| |||||||| || ||||||||||||||
Sbjct: 1889 tccgggggccgccgttgccctcgcagttgccgc 1857
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>emb|Z81543.1|CEF49B2 Caenorhabditis elegans Cosmid F49B2, complete sequence
          Length = 38086

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 447   gctcaggataggaagcagaagaaga 471
             ||||||||||||||| |||||||||
Sbjct: 24231 gctcaggataggaagaagaagaaga 24255
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>gb|AC107786.14| Mus musculus chromosome 5, clone RP23-5E3, complete sequence
          Length = 226673

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 464   gaagaagagcaggacctgca 483
             ||||||||||||||||||||
Sbjct: 99919 gaagaagagcaggacctgca 99900
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>gb|AC113533.14| Mus musculus chromosome 5, clone RP23-52A21, complete sequence
          Length = 206930

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 470   gagcaggacctgcagtgctg 489
             ||||||||||||||||||||
Sbjct: 75932 gagcaggacctgcagtgctg 75913
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>gb|AC123678.19| Mus musculus chromosome 3, clone RP23-276A22, complete sequence
          Length = 198615

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 22     attttctatttttatccttcaccg 45
              |||||||||||||| |||||||||
Sbjct: 190056 attttctatttttagccttcaccg 190079
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>gb|AE014314.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 11 of
              11 of the complete sequence
          Length = 249198

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 470    gagcaggacctgcagtgctg 489
              ||||||||||||||||||||
Sbjct: 182976 gagcaggacctgcagtgctg 182957
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>emb|AL450333.13| Human DNA sequence from clone RP11-25O6 on chromosome 6, complete
             sequence
          Length = 156964

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    attttctatttttatccttc 41
             ||||||||||||||||||||
Sbjct: 47389 attttctatttttatccttc 47408
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>emb|AL138701.16| Human DNA sequence from clone RP11-406G20 on chromosome 13, complete
              sequence
          Length = 173496

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 470    gagcaggacctgcagtgctg 489
              ||||||||||||||||||||
Sbjct: 113481 gagcaggacctgcagtgctg 113462
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>emb|AL732621.11| Mouse DNA sequence from clone RP23-299D17 on chromosome 11 Contains
             part of the Asb3 gene for ankyrin repeat and SOCS
             box-containing protein 3 and a Cpg island, complete
             sequence
          Length = 94738

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 465   aagaagagcaggacctgcag 484
             ||||||||||||||||||||
Sbjct: 65248 aagaagagcaggacctgcag 65229
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>gb|AC022027.7| Homo sapiens chromosome 10 clone RP11-59J5, complete sequence
          Length = 103493

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 412   gaggtgggggagcgcgcctc 431
             ||||||||||||||||||||
Sbjct: 14936 gaggtgggggagcgcgcctc 14917
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>gb|AC096886.2| Homo sapiens chromosome 3 clone RP11-3F4, complete sequence
          Length = 163114

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    atcccattttctatttttat 36
             ||||||||||||||||||||
Sbjct: 85061 atcccattttctatttttat 85080
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 200      gattcgatccgccccccgtt 219
                ||||||||||||||||||||
Sbjct: 24333613 gattcgatccgccccccgtt 24333594
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>gb|AC009460.4|AC009460 Drosophila melanogaster, chromosome 2R, region 60B-60C, BAC clone
              BACR04P18, complete sequence
          Length = 159455

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 366    ccatctccatctccttttcg 385
              ||||||||||||||||||||
Sbjct: 100130 ccatctccatctccttttcg 100149
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>gb|AC107863.9| Mus musculus chromosome 3, clone RP23-383E14, complete sequence
          Length = 194268

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 22     attttctatttttatccttcaccg 45
              |||||||||||||| |||||||||
Sbjct: 114320 attttctatttttagccttcaccg 114343
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>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 407     gttccgaggtgggggagcgcgcctcaca 434
               ||||||| || |||||||||||||||||
Sbjct: 5336034 gttccgaagtaggggagcgcgcctcaca 5336061
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>dbj|AP004615.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0414C05
          Length = 123105

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   gattcgatccgccccccgtt 219
             ||||||||||||||||||||
Sbjct: 58243 gattcgatccgccccccgtt 58224
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>gb|AE003463.2| Drosophila melanogaster chromosome 2R, section 70 of 73 of the complete
              sequence
          Length = 298827

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 366    ccatctccatctccttttcg 385
              ||||||||||||||||||||
Sbjct: 199531 ccatctccatctccttttcg 199550
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>gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome
          Length = 1698955

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     tcccattttctatttttatc 37
              ||||||||||||||||||||
Sbjct: 226437 tcccattttctatttttatc 226418
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>gb|AC130716.3| Mus musculus BAC clone RP23-463B12 from 3, complete sequence
          Length = 172517

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 465    aagaagagcaggacctgcag 484
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Sbjct: 118750 aagaagagcaggacctgcag 118731


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,881,140
Number of Sequences: 3902068
Number of extensions: 3881140
Number of successful extensions: 88924
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88598
Number of HSP's gapped (non-prelim): 320
length of query: 496
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 474
effective length of database: 17,147,199,772
effective search space: 8127772691928
effective search space used: 8127772691928
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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