ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl26d01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NOP14_HUMAN (P78316) Probable nucleolar complex protein 14 46 2e-05
2NOP14_MOUSE (Q8R3N1) Probable nucleolar complex protein 14 45 3e-05
3NOP14_SCHPO (O43051) Probable nucleolar complex protein 14 31 0.63
4SYA_MOUSE (Q8BGQ7) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-... 28 6.9
5WNK1_HUMAN (Q9H4A3) Serine/threonine-protein kinase WNK1 (EC 2.7... 28 6.9

>NOP14_HUMAN (P78316) Probable nucleolar complex protein 14|
          Length = 857

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 23/54 (42%), Positives = 36/54 (66%)
 Frame = +3

Query: 231 SNPFEAIWSRRKFDVLGKKRKGEERRTSRSRSDAVXQRENTLLKEFEQSAKSSV 392
           SNPFE   +R+KF +LG+K + +      SR+ A+ +R  TLLKE+++  KS+V
Sbjct: 29  SNPFEVKVNRQKFQILGRKTRHDVGLPGVSRARALRKRTQTLLKEYKERDKSNV 82



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>NOP14_MOUSE (Q8R3N1) Probable nucleolar complex protein 14|
          Length = 860

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 22/53 (41%), Positives = 35/53 (66%)
 Frame = +3

Query: 234 NPFEAIWSRRKFDVLGKKRKGEERRTSRSRSDAVXQRENTLLKEFEQSAKSSV 392
           NPFE   +R+KF +LG+K + +      SR+ A+ +R  TLLKE+++  KS+V
Sbjct: 30  NPFEVKVNRQKFQILGRKTRHDVGLPGVSRARAIRKRTQTLLKEYKERNKSNV 82



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>NOP14_SCHPO (O43051) Probable nucleolar complex protein 14|
          Length = 827

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = +3

Query: 234 NPFEAIWSRRKFDVLGKKRKGEERRTSRSRSDAVXQRENTLLKEFEQSAKS 386
           N F+  +++RKFDV G++ KG E +   SR      R  T+  E ++  +S
Sbjct: 52  NLFDRQFTKRKFDVGGRRVKGTEGKPGVSRGVGEELRRRTIGAELKKRNRS 102



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>SYA_MOUSE (Q8BGQ7) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 968

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +2

Query: 242 RGHLVAPQVRRARQEAQGRGEAHLPLPLRRCPXEGEHPAQGVRA 373
           +G +   Q+++A +   G  EA  P+  + CP       QG+RA
Sbjct: 641 KGAMSTQQIKKAEEIVNGMIEAAKPVYTQDCPLAAAKAIQGLRA 684



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>WNK1_HUMAN (Q9H4A3) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1)|
           (Protein kinase with no lysine 1) (Protein kinase,
           lysine-deficient 1) (Kinase deficient protein)
          Length = 2382

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 285 KRKGEERRTSRSRSDAVXQRENTLLKEFEQSAKS 386
           KRK E+R+  R   +   Q E++L ++ EQS+ S
Sbjct: 566 KRKREQRQLVREEQEKKKQEESSLKQQVEQSSAS 599


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.312    0.122    0.354 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,100,513
Number of Sequences: 219361
Number of extensions: 303830
Number of successful extensions: 913
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
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