Clone Name | bastl26d01 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | NOP14_HUMAN (P78316) Probable nucleolar complex protein 14 | 46 | 2e-05 | 2 | NOP14_MOUSE (Q8R3N1) Probable nucleolar complex protein 14 | 45 | 3e-05 | 3 | NOP14_SCHPO (O43051) Probable nucleolar complex protein 14 | 31 | 0.63 | 4 | SYA_MOUSE (Q8BGQ7) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-... | 28 | 6.9 | 5 | WNK1_HUMAN (Q9H4A3) Serine/threonine-protein kinase WNK1 (EC 2.7... | 28 | 6.9 |
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>NOP14_HUMAN (P78316) Probable nucleolar complex protein 14| Length = 857 Score = 46.2 bits (108), Expect = 2e-05 Identities = 23/54 (42%), Positives = 36/54 (66%) Frame = +3 Query: 231 SNPFEAIWSRRKFDVLGKKRKGEERRTSRSRSDAVXQRENTLLKEFEQSAKSSV 392 SNPFE +R+KF +LG+K + + SR+ A+ +R TLLKE+++ KS+V Sbjct: 29 SNPFEVKVNRQKFQILGRKTRHDVGLPGVSRARALRKRTQTLLKEYKERDKSNV 82
>NOP14_MOUSE (Q8R3N1) Probable nucleolar complex protein 14| Length = 860 Score = 45.4 bits (106), Expect = 3e-05 Identities = 22/53 (41%), Positives = 35/53 (66%) Frame = +3 Query: 234 NPFEAIWSRRKFDVLGKKRKGEERRTSRSRSDAVXQRENTLLKEFEQSAKSSV 392 NPFE +R+KF +LG+K + + SR+ A+ +R TLLKE+++ KS+V Sbjct: 30 NPFEVKVNRQKFQILGRKTRHDVGLPGVSRARAIRKRTQTLLKEYKERNKSNV 82
>NOP14_SCHPO (O43051) Probable nucleolar complex protein 14| Length = 827 Score = 31.2 bits (69), Expect = 0.63 Identities = 17/51 (33%), Positives = 28/51 (54%) Frame = +3 Query: 234 NPFEAIWSRRKFDVLGKKRKGEERRTSRSRSDAVXQRENTLLKEFEQSAKS 386 N F+ +++RKFDV G++ KG E + SR R T+ E ++ +S Sbjct: 52 NLFDRQFTKRKFDVGGRRVKGTEGKPGVSRGVGEELRRRTIGAELKKRNRS 102
>SYA_MOUSE (Q8BGQ7) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 968 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = +2 Query: 242 RGHLVAPQVRRARQEAQGRGEAHLPLPLRRCPXEGEHPAQGVRA 373 +G + Q+++A + G EA P+ + CP QG+RA Sbjct: 641 KGAMSTQQIKKAEEIVNGMIEAAKPVYTQDCPLAAAKAIQGLRA 684
>WNK1_HUMAN (Q9H4A3) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1)| (Protein kinase with no lysine 1) (Protein kinase, lysine-deficient 1) (Kinase deficient protein) Length = 2382 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +3 Query: 285 KRKGEERRTSRSRSDAVXQRENTLLKEFEQSAKS 386 KRK E+R+ R + Q E++L ++ EQS+ S Sbjct: 566 KRKREQRQLVREEQEKKKQEESSLKQQVEQSSAS 599 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.312 0.122 0.354 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,100,513 Number of Sequences: 219361 Number of extensions: 303830 Number of successful extensions: 913 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 900 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 913 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)