Clone Name | bastl26c11 |
---|---|
Clone Library Name | barley_pub |
>Y3523_METJA (Q60282) Hypothetical protein MJECL23| Length = 827 Score = 36.2 bits (82), Expect = 0.045 Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 1/120 (0%) Frame = +3 Query: 33 KSGRRRVVVLTEENVIASLDLRSGDIFWRHVIEKNNPIDQLSLSAGKYVVTLSSGGSILR 212 K + +++L N + +LD+++G+ W + +E N +D L + +V L G + Sbjct: 99 KDIKDNIIILGCSNHLFALDIKTGNKIWEYKVEHN--VDSLFIKDN--IVMLEYRGGHVC 154 Query: 213 AWNLPDGQMVWETNIQTSSASKSLLHVLSNSKVVQDNLVLVLAG-QWIYAISSIDGLISW 389 ++ G +WE+ + SL +DN+V++ G ++IYAI G W Sbjct: 155 VLDVMTGDKIWESKVGERMWGFSL----------KDNIVILGDGDKYIYAIDVRTGGKLW 204 Score = 35.4 bits (80), Expect = 0.077 Identities = 30/130 (23%), Positives = 58/130 (44%) Frame = +3 Query: 60 LTEENVIASLDLRSGDIFWRHVIEKNNPIDQLSLSAGKYVVTLSSGGSILRAWNLPDGQM 239 + EE +LD+ +G WR I+ D SLS +V L + A ++ G M Sbjct: 566 ILEEGYAYALDINTGREIWRSKIKH----DVRSLSIKDDIVVLGCKKGYILALDINAGNM 621 Query: 240 VWETNIQTSSASKSLLHVLSNSKVVQDNLVLVLAGQWIYAISSIDGLISWGKEFTLDGLE 419 +WE ++ + ++L ++++++L ++YA+ G W F +G E Sbjct: 622 LWEFKAKSGKSIRNL--------SIKNDILLFGCDNYLYALDIDTGRELW--RFKAEG-E 670 Query: 420 IKQVVQSPEN 449 +K + +N Sbjct: 671 VKSLSIKKDN 680 Score = 31.2 bits (69), Expect = 1.4 Identities = 24/104 (23%), Positives = 48/104 (46%) Frame = +3 Query: 51 VVVLTEENVIASLDLRSGDIFWRHVIEKNNPIDQLSLSAGKYVVTLSSGGSILRAWNLPD 230 VV+ ++ I +LD+ +G++ W + I LS+ K + L + L A ++ Sbjct: 602 VVLGCKKGYILALDINAGNMLWEFKAKSGKSIRNLSI---KNDILLFGCDNYLYALDIDT 658 Query: 231 GQMVWETNIQTSSASKSLLHVLSNSKVVQDNLVLVLAGQWIYAI 362 G+ +W + KSL + +DN++L G ++Y + Sbjct: 659 GRELW--RFKAEGEVKSL-------SIKKDNVLLGCRGGYVYLL 693
>ATG18_CRYNE (Q5KGQ2) Autophagy-related protein 18| Length = 423 Score = 32.3 bits (72), Expect = 0.65 Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%) Frame = +3 Query: 141 PIDQLSL-SAGKYVVTLSSGGSILRAWNLPDGQMVWETNIQTSSA 272 PI L+L S G + T S G+++R +++PD + +W+ +SSA Sbjct: 204 PIAALALNSTGTMLATASDKGTVVRVFSVPDAKKLWQFRRGSSSA 248
>YFGL_ECOLI (P77774) Lipoprotein yfgL precursor| Length = 392 Score = 31.6 bits (70), Expect = 1.1 Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 16/146 (10%) Frame = +3 Query: 51 VVVLTEENVIASLDLRSGDIFWRHVIEKNNPIDQLSLSAGKYVVTLSSGGSILRAWN--- 221 V++ T + +L+ G + W N + LSL G+ T + G +++ N Sbjct: 162 VLIHTSNGQLQALNEADGAVKWT----VNLDMPSLSLR-GESAPTTAFGAAVVGGDNGRV 216 Query: 222 ----LPDGQMVWETNIQTSSASKSL--LHVLSNSKVVQDNLVLVLAGQW-IYAISSIDGL 380 + GQM+W+ I ++ S + L + + VV + +V LA + A+ G Sbjct: 217 SAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQ 276 Query: 381 ISWGKE------FTLDGLEIKQVVQS 440 I W +E F +DG I V Q+ Sbjct: 277 IMWKRELGSVNDFIVDGNRIYLVDQN 302
>YP183_YEAST (Q08924) WD-repeat protein YPL183C| Length = 1013 Score = 31.6 bits (70), Expect = 1.1 Identities = 16/62 (25%), Positives = 32/62 (51%) Frame = +3 Query: 159 LSAGKYVVTLSSGGSILRAWNLPDGQMVWETNIQTSSASKSLLHVLSNSKVVQDNLVLVL 338 ++ GK V+T +S ++RAW + G++ +T+ A L ++SN + L++ Sbjct: 945 INGGKEVIT-TSVDQVIRAWEITAGKLSLVDKKRTTVADTGSLEIISNDEDADSEKTLLI 1003 Query: 339 AG 344 G Sbjct: 1004 GG 1005
>AFSK_STRCO (P54741) Serine/threonine protein kinase afsK (EC 2.7.11.1)| Length = 799 Score = 30.4 bits (67), Expect = 2.5 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Frame = +3 Query: 84 SLDLRSGDIFWRHVIEKNNPIDQLSLSAGKYVVTLSSGGSILRAWNLPDGQMVWE-TNIQ 260 +LD R G WR ++ + + L G V+T + GG + +AW GQ +WE T Q Sbjct: 493 ALDAREGADLWR--VQTDAWVYSLQADRGT-VLTATRGGGV-QAWEASAGQKLWEVTGAQ 548 Query: 261 TSSAS 275 T S Sbjct: 549 TDFES 553
>Y2124_ANASP (Q8YV57) Hypothetical WD-repeat protein all2124| Length = 1683 Score = 30.0 bits (66), Expect = 3.2 Identities = 22/85 (25%), Positives = 38/85 (44%) Frame = +3 Query: 60 LTEENVIASLDLRSGDIFWRHVIEKNNPIDQLSLSAGKYVVTLSSGGSILRAWNLPDGQM 239 L + N+IAS L + W+ + +P++ L+ ++G Y V+ GSI+ Sbjct: 1331 LPDSNIIASASLDNTIRLWQRPLI--SPLEVLAGNSGVYAVSFLHDGSIIATAGADGNIQ 1388 Query: 240 VWETNIQTSSASKSLLHVLSNSKVV 314 +W S SLL L +K + Sbjct: 1389 LWH------SQDGSLLKTLPGNKAI 1407
>AMPA_PSESM (Q887M0) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine| aminopeptidase) (LAP) (Leucyl aminopeptidase) Length = 496 Score = 29.6 bits (65), Expect = 4.2 Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 5/88 (5%) Frame = +3 Query: 177 VVTLSSGGSILRAWNLPD-----GQMVWETNIQTSSASKSLLHVLSNSKVVQDNLVLVLA 341 +V + SGG+I D GQ + TN+Q A + LL + + D + +A Sbjct: 34 LVDIKSGGAISAVLERGDLAGKSGQTLLLTNLQNIKAERVLLVGIGKDGELSDRQLKKIA 93 Query: 342 GQWIYAISSIDGLISWGKEFTLDGLEIK 425 G +SS+ GL LD L +K Sbjct: 94 GS---VLSSLKGLGGSDAVIALDDLSVK 118
>HXK1_DROME (Q9NFT9) Hexokinase type 1 (EC 2.7.1.1)| Length = 465 Score = 29.6 bits (65), Expect = 4.2 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Frame = +3 Query: 279 SLLHVLSNSKVVQDNLVLVLAGQWIYAISSIDG--LISWGKEFTLDGLEIKQVVQ 437 S+ + + KV +DNL L +A + ++D L+SW KEF G K VVQ Sbjct: 123 SIANFVKEKKVDKDNLPLGIAFAFTLKKLALDVGILVSWTKEFGAQGAIGKDVVQ 177
>BTNL2_MOUSE (O70355) Butyrophilin-like protein 2 precursor (Fragment)| Length = 452 Score = 29.3 bits (64), Expect = 5.5 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Frame = -3 Query: 252 WFPRPSVHQED----SMPSIYYLPKKG*QHIFQLID*ADQWGYSSQ*HVAKIYLLNEDQE 85 WFPRP V D +MPS ++G Q +FQ ++ S +V L QE Sbjct: 386 WFPRPHVQWRDRDGKTMPSFSEAFQQGSQELFQ-VETLLLVTNGSMVNVTCSISLPLGQE 444 Query: 84 KRSHFPLS 61 K + FPLS Sbjct: 445 KTARFPLS 452
>SYIM_MOUSE (Q8BIJ6) Isoleucyl-tRNA synthetase, mitochondrial precursor (EC| 6.1.1.5) (Isoleucine--tRNA ligase) (IleRS) Length = 1012 Score = 29.3 bits (64), Expect = 5.5 Identities = 15/67 (22%), Positives = 30/67 (44%) Frame = +3 Query: 18 VYHTQKSGRRRVVVLTEENVIASLDLRSGDIFWRHVIEKNNPIDQLSLSAGKYVVTLSSG 197 V+H + + T E++I ++ D++W E+ P + L+ + G + + G Sbjct: 534 VFHHKTKDEYLINSQTTEHIIKLVEQHGSDVWWTLPAEQLLPAEVLAQAGGPGALEYAPG 593 Query: 198 GSILRAW 218 IL W Sbjct: 594 QDILDIW 600
>RNC_MYCGE (P47607) Ribonuclease III (EC 3.1.26.3) (RNase III)| Length = 262 Score = 29.3 bits (64), Expect = 5.5 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Frame = +3 Query: 15 AVYHTQKSGRRRV-VVLTEENVIASLDLRSGDIFWRHVIEKNNPIDQLSL 161 +++ QK RV V LT N++ S+ GDI W I N D S+ Sbjct: 168 SLFQEQKLPEPRVRVSLTSNNLVLSIIELDGDIIWSQAIPNNKNYDDKSV 217
>UTP15_XENTR (Q5XGE2) U3 small nucleolar RNA-associated protein 15 homolog| Length = 515 Score = 29.3 bits (64), Expect = 5.5 Identities = 27/135 (20%), Positives = 48/135 (35%) Frame = +3 Query: 66 EENVIASLDLRSGDIFWRHVIEKNNPIDQLSLSAGKYVVTLSSGGSILRAWNLPDGQMVW 245 E++V+ D+ SG R + + + +A KY + S R W++P+G + Sbjct: 100 EDSVVQLFDI-SGKAALRQFSGHSKAVHFVDFTADKYRIVSGSDDYTSRLWDIPNGVEIT 158 Query: 246 ETNIQTSSASKSLLHVLSNSKVVQDNLVLVLAGQWIYAISSIDGLISWGKEFTLDGLEIK 425 N T L+N L G + + I DG G ++ Sbjct: 159 SYNEHTDYIRCGCTSALNND--------LFATGSYDHTIKIFDGRTDKSVMSMDHGQPVE 210 Query: 426 QVVQSPENDIVYVVG 470 V+ P ++ G Sbjct: 211 SVLLFPSGGLLVSAG 225
>DHG_ECOLI (P15877) Quinoprotein glucose dehydrogenase (EC 1.1.5.2) (Glucose| dehydrogenase [pyrroloquinoline-quinone]) Length = 796 Score = 29.3 bits (64), Expect = 5.5 Identities = 17/99 (17%), Positives = 43/99 (43%), Gaps = 20/99 (20%) Frame = +3 Query: 78 IASLDLRSGDIFWRHVIEKNNPIDQLSL--------------------SAGKYVVTLSSG 197 I++LDL++ ++ W+ I P D + +AG + ++ Sbjct: 672 ISALDLKTNEVVWKKRI--GTPQDSMPFPMPVPVPFNMGMPMLGGPISTAGNVLFIAATA 729 Query: 198 GSILRAWNLPDGQMVWETNIQTSSASKSLLHVLSNSKVV 314 + LRA+N+ +G+ +W+ + + + + ++ + V Sbjct: 730 DNYLRAYNMSNGEKLWQGRLPAGGQATPMTYEVNGKQYV 768
>CYSQ_BUCAI (P57624) Protein cysQ homolog| Length = 265 Score = 28.9 bits (63), Expect = 7.2 Identities = 28/130 (21%), Positives = 59/130 (45%), Gaps = 14/130 (10%) Frame = +3 Query: 114 WRHVIEKNNPIDQLSLSAGKYVVTLSSGGSILRAWNLPDGQMVWETNIQTSSASKSLLHV 293 WR +++K I QL+ SAG ++ L + + PD + + + ++ K L + Sbjct: 14 WRKMLDK---ICQLARSAGHCIMKLYNSQKFINVSYKPDNTPITDVDYAANNIIKKGLSL 70 Query: 294 LSNSKVV---QDNLVLVLAGQW--IYAISSIDGLISWGK---EFTLD------GLEIKQV 431 +S + +++ + W + + +DG + K EFT++ G+ I V Sbjct: 71 ISPQIPIISEEESYNFEICRNWNSYWLVDPLDGTKEFLKKNGEFTVNISLIEYGVPILGV 130 Query: 432 VQSPENDIVY 461 + +P D++Y Sbjct: 131 IYAPFFDVLY 140
>DHGA_ACICA (P05465) Quinoprotein glucose dehydrogenase-A precursor (EC 1.1.5.2)| (Glucose dehydrogenase-A [pyrroloquinoline-quinone]) (Quinoprotein glucose DH) (GDH-A) Length = 801 Score = 28.5 bits (62), Expect = 9.4 Identities = 23/121 (19%), Positives = 57/121 (47%), Gaps = 17/121 (14%) Frame = +3 Query: 78 IASLDLRSGDIFWRHVIE--KNNPIDQLSLSAGKYVV-----TLSSGGSI---------- 206 +A +DL++ ++ W+ I +++ + L A K V ++S+ G++ Sbjct: 679 VAGVDLKTHEVVWKKRIGTIRDSLPNLFQLPAVKIGVPGLGGSISTAGNVMFVGATQDNY 738 Query: 207 LRAWNLPDGQMVWETNIQTSSASKSLLHVLSNSKVVQDNLVLVLAGQWIYAISSIDGLIS 386 LRA+N+ +G+ +WE + + + + ++ + V V++ G + D L++ Sbjct: 739 LRAFNVTNGKKLWEARLPAGGQATPMTYEINGKQYV----VIMAGGHGSFGTKMGDYLVA 794 Query: 387 W 389 + Sbjct: 795 Y 795
>FKBP3_MOUSE (Q62446) FK506-binding protein 3 (EC 5.2.1.8) (Peptidyl-prolyl| cis-trans isomerase) (PPIase) (Rotamase) (25 kDa FKBP) (FKBP-25) (Rapamycin-selective 25 kDa immunophilin) Length = 224 Score = 28.5 bits (62), Expect = 9.4 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 3/37 (8%) Frame = +3 Query: 198 GSILRAW---NLPDGQMVWETNIQTSSASKSLLHVLS 299 G ++ W LPDG V++TNIQTSS K LS Sbjct: 128 GDVVHCWYTGTLPDGT-VFDTNIQTSSKKKKNAKPLS 163
>S3TC2_MOUSE (Q80VA5) SH3 domain and tetratricopeptide repeats-containing| protein 2 Length = 1289 Score = 28.5 bits (62), Expect = 9.4 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 4/60 (6%) Frame = +3 Query: 69 ENVIASLDLRSGDIFWRHVIEKNNPIDQ----LSLSAGKYVVTLSSGGSILRAWNLPDGQ 236 EN+ L L+ G F R V P D+ L+L + + LS G S A +L GQ Sbjct: 166 ENIYLGLLLQEGHFFCRAVCSVAQPADKEGEYLTLCKNELISVLSGGESECEAMSLVTGQ 225
>KE4_CANFA (Q5TJF6) Zinc transporter SLC39A7 (Solute carrier family 39 member| 7) (Histidine-rich membrane protein Ke4) Length = 469 Score = 28.5 bits (62), Expect = 9.4 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = -3 Query: 117 AKIYLLNEDQEKRSHFPLSRPQHASSHSSE 28 A ++L+ E SH PL +P H SHS + Sbjct: 184 AFLHLIPHALEPHSHHPLEQPGHGHSHSGQ 213
>DHG_GLUOX (P27175) Quinoprotein glucose dehydrogenase precursor (EC 1.1.5.2)| (Glucose dehydrogenase [pyrroloquinoline-quinone]) Length = 808 Score = 28.5 bits (62), Expect = 9.4 Identities = 16/102 (15%), Positives = 44/102 (43%), Gaps = 23/102 (22%) Frame = +3 Query: 78 IASLDLRSGDIFWRHVIEKNN-------------PIDQLSLSAGKYVVTLSSGGSI---- 206 +A +DL++ + W+H +N P+ + + LS+ G++ Sbjct: 683 VAGIDLKTNKVVWQH---RNGTLRDSMYGSSLPIPLPPIKIGVPSLGGPLSTAGNLGFLT 739 Query: 207 ------LRAWNLPDGQMVWETNIQTSSASKSLLHVLSNSKVV 314 +RA+NL G+++W+ + + + + + ++ + + Sbjct: 740 ASMDYYIRAYNLTTGKVLWQDRLPAGAQATPITYAINGKQYI 781
>SYY_CHLPN (Q9Z8I2) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA| ligase) (TyrRS) Length = 412 Score = 28.5 bits (62), Expect = 9.4 Identities = 18/71 (25%), Positives = 31/71 (43%) Frame = +3 Query: 225 PDGQMVWETNIQTSSASKSLLHVLSNSKVVQDNLVLVLAGQWIYAISSIDGLISWGKEFT 404 P G+ + +QTS + + + + + LV W+ IS ID L GK F Sbjct: 76 PSGKQSERSLLQTSEVFDNSQKITACLQRYLPGVTLVNNADWLQEISLIDFLRDIGKHFR 135 Query: 405 LDGLEIKQVVQ 437 L + +K ++ Sbjct: 136 LGQMLVKDTIK 146
>Y143_SYNY3 (P74442) Hypothetical WD-repeat protein slr0143| Length = 1191 Score = 28.5 bits (62), Expect = 9.4 Identities = 22/83 (26%), Positives = 38/83 (45%) Frame = +3 Query: 141 PIDQLSLSAGKYVVTLSSGGSILRAWNLPDGQMVWETNIQTSSASKSLLHVLSNSKVVQD 320 PIDQ+++S + ++ ++R W+ G + E +S S SLL + N + Sbjct: 1081 PIDQIAISPDSQWIATAASDGMVRLWD-QQGNLRGEF----TSTSGSLLGLDFNRQ---- 1131 Query: 321 NLVLVLAGQWIYAISSIDGLISW 389 GQW+ A++ L SW Sbjct: 1132 -------GQWLLAVAQNGDLQSW 1147 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,263,420 Number of Sequences: 219361 Number of extensions: 1421350 Number of successful extensions: 3907 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 3812 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3902 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)