>XPO7_MOUSE (Q9EPK7) Exportin-7 (Exp7) (Ran-binding protein 16)|
          Length = 1086

 Score = 72.0 bits (175), Expect = 8e-13
 Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
 Frame = +1

Query: 208 MESLAQLEVLCEKLYNSRDSAERAHAESTLKCFSENSDYISQCQYILDNASTPYALMLAS 387
           ++SLAQLE LC++LY + D+  R  AE  L  F+ + D +S+CQ +L+  S+ Y+ +LA+
Sbjct: 4   VQSLAQLENLCKQLYETTDTTTRLQAEKALVEFTNSPDCLSKCQLLLERGSSSYSQLLAA 63

Query: 388 TSLVKQVXXXX--XXXXXXXXIRNYVMNYLASR 480
           T L K V              IRNYV+NYLA+R
Sbjct: 64  TCLTKLVSRTNNPLPLEQRIDIRNYVLNYLATR 96

>XPO7_HUMAN (Q9UIA9) Exportin-7 (Exp7) (Ran-binding protein 16)|
          Length = 1086

 Score = 72.0 bits (175), Expect = 8e-13
 Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
 Frame = +1

Query: 208 MESLAQLEVLCEKLYNSRDSAERAHAESTLKCFSENSDYISQCQYILDNASTPYALMLAS 387
           ++SLAQLE LC++LY + D+  R  AE  L  F+ + D +S+CQ +L+  S+ Y+ +LA+
Sbjct: 4   VQSLAQLENLCKQLYETTDTTTRLQAEKALVEFTNSPDCLSKCQLLLERGSSSYSQLLAA 63

Query: 388 TSLVKQVXXXX--XXXXXXXXIRNYVMNYLASR 480
           T L K V              IRNYV+NYLA+R
Sbjct: 64  TCLTKLVSRTNNPLPLEQRIDIRNYVLNYLATR 96

>RBP17_MOUSE (Q99NF8) Ran-binding protein 17|
          Length = 1088

 Score = 65.9 bits (159), Expect = 6e-11
 Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
 Frame = +1

Query: 211 ESLAQLEVLCEKLYNSRDSAERAHAESTLKCFSENSDYISQCQYILDNASTPYALMLAST 390
           +SLA+LEVLC  LY   D  ER  AE  L    ++ + +S+CQ +L+  +T YA +LA+T
Sbjct: 6   QSLAELEVLCTHLYVGTDLTERIEAEKALLELIDSPECLSKCQLLLEQGTTSYAQLLAAT 65

Query: 391 SLVKQVXXXX-XXXXXXXXIRNYVMNYLASR 480
            L K V             IRNY++NY+AS+
Sbjct: 66  CLSKLVTRINPLPIEQRIDIRNYILNYVASQ 96

>RBP17_HUMAN (Q9H2T7) Ran-binding protein 17|
          Length = 1088

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
 Frame = +1

Query: 211 ESLAQLEVLCEKLYNSRDSAERAHAESTLKCFSENSDYISQCQYILDNASTPYALMLAST 390
           +SLA+LEVLC  LY   D  +R  AE  L    ++ + +S+CQ +L+  +T YA +LA+T
Sbjct: 6   QSLAELEVLCTHLYIGTDLTQRIEAEKALLELIDSPECLSKCQLLLEQGTTSYAQLLAAT 65

Query: 391 SLVKQVXXXX-XXXXXXXXIRNYVMNYLASR 480
            L K V             IRNY++NY+AS+
Sbjct: 66  CLSKLVSRVSPLPVEQRMDIRNYILNYVASQ 96

>RBP16_DROME (Q9GQN0) Ran-binding protein 16|
          Length = 1098

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 32/87 (36%), Positives = 50/87 (57%)
 Frame = +1

Query: 217 LAQLEVLCEKLYNSRDSAERAHAESTLKCFSENSDYISQCQYILDNASTPYALMLASTSL 396
           + QLEVLC++LY + D   R+ AE  L  F  + D + +CQ +L  A + YA +LA+++L
Sbjct: 3   IQQLEVLCKQLYEATDIRIRSEAEKALVTFVSSQDALPKCQLLLQRADSSYAQLLAASTL 62

Query: 397 VKQVXXXXXXXXXXXXIRNYVMNYLAS 477
            K +            IR+Y +NYLA+
Sbjct: 63  TKLI--QGLSLQERIDIRSYALNYLAT 87

>XPO4_HUMAN (Q9C0E2) Exportin-4 (Exp4)|
          Length = 1151

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
 Frame = +1

Query: 211 ESLAQLEVLCEKLY---NSRDSAERAHAESTLKCFSENSDYISQCQYILDNASTPYALML 381
           E +AQLE   + L    +  ++ +R HAE     F ++    + C++IL+ +   Y L  
Sbjct: 10  EVIAQLENAAKVLMAPPSMVNNEQRQHAEHIFLSFRKSKSPFAVCKHILETSKVDYVLFQ 69

Query: 382 ASTSLVKQVXX--XXXXXXXXXXIRNYVMNYLASRGPN 489
           A+T++++ V              +R +++ Y+  R PN
Sbjct: 70  AATAIMEAVVREWILLEKGSIESLRTFLLTYVLQR-PN 106

>XPO4_MOUSE (Q9ESJ0) Exportin-4 (Exp4)|
          Length = 1151

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
 Frame = +1

Query: 211 ESLAQLEVLCEKLY---NSRDSAERAHAESTLKCFSENSDYISQCQYILDNASTPYALML 381
           E +AQLE   + L    +   + +R HAE     F ++    + C++IL+ +   Y L  
Sbjct: 10  EVIAQLENAAKVLMAPPSMVSNEQRQHAEHIFLSFRKSKSPFAVCRHILETSKVDYVLFQ 69

Query: 382 ASTSLVKQVXX--XXXXXXXXXXIRNYVMNYLASRGPN 489
           A+T++++ V              +R +++ Y+  R PN
Sbjct: 70  AATAIMEAVVREWVLLEKGSIESLRTFLLTYVLQR-PN 106

>ESR2_MOUSE (O08537) Estrogen receptor beta (ER-beta)|
          Length = 530

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
 Frame = -3

Query: 403 ASPSLYWPTSRHME--LTHCP---IYIGTAKCSHCSLRS 302
           ASP++ WPTS H+    THC    +Y    K   C  RS
Sbjct: 74  ASPNVLWPTSGHLSPLATHCQSSLLYAEPQKSPWCEARS 112

>BIS1_SCHPO (O59793) Stress response protein bis1|
          Length = 384

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +2

Query: 5   SVFHTPPSPKNARLRSPR-RDGSLRPSHHSRRRTVTSADSAGTGIRTW 145
           S F+ P  P+  RL + R RD       HS   T+TS DSA T + ++
Sbjct: 273 SYFNIPERPRRERLHAMRVRD----IRSHSTNTTITSVDSASTALNSY 316

>SMBT1_HUMAN (Q9UHJ3) Scm-like with four MBT domains protein 1 (Renal ubiquitous|
           protein 1)
          Length = 866

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 17/47 (36%), Positives = 20/47 (42%)
 Frame = +2

Query: 71  LRPSHHSRRRTVTSADSAGTGIRTWWHINPGYLIERKFGAPCSCLQW 211
           LRP +H+RR  V  ADS G      W +  G  I    G P     W
Sbjct: 313 LRPENHARRSFVCHADSPGI-FPVQWSLKNGLHISPPPGYPSQDFDW 358

>OAM_ASCSU (Q01456) Ovarian abundant message protein (Protein OAM)|
          Length = 590

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 355 HCPIYIGTAKCSHCSLRST*ACFLHVLSQPS 263
           +C   +G A  SHC LR    C  H L+QP+
Sbjct: 547 YCSHRLGAACRSHCRLRCGVLCLPHALTQPT 577


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,062,342
Number of Sequences: 219361
Number of extensions: 1183718
Number of successful extensions: 3325
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3317
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3478785780
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)