>ref|XM_468998.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2706

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 102/119 (85%), Gaps = 1/119 (0%)
 Strand = Plus / Plus

                                                                       
Query: 369 cttgctaccgagctgggcctatggcctcggctccatgggatccatctcggtgtcctacgg 428
           |||||| || || |||||||||||||| || |||||||  |||||| | |||||||||||
Sbjct: 42  cttgctgcccagttgggcctatggccttggatccatggcgtccatcgccgtgtcctacgg 101

                                                                      
Query: 429 cgaggacggtccggtgttctgcggcctcagctcggacggctc-cacttggtcgcctgct 486
           ||||||||| || ||||||||||| |||| |||||| || || ||||||||| ||||||
Sbjct: 102 cgaggacggccccgtgttctgcgggctcaactcggatggttctcacttggtcacctgct 160

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 102/119 (85%), Gaps = 1/119 (0%)
 Strand = Plus / Plus

                                                                            
Query: 369      cttgctaccgagctgggcctatggcctcggctccatgggatccatctcggtgtcctacgg 428
                |||||| || || |||||||||||||| || |||||||  |||||| | |||||||||||
Sbjct: 24304453 cttgctgcccagttgggcctatggccttggatccatggcgtccatcgccgtgtcctacgg 24304512

                                                                           
Query: 429      cgaggacggtccggtgttctgcggcctcagctcggacggctc-cacttggtcgcctgct 486
                ||||||||| || ||||||||||| |||| |||||| || || ||||||||| ||||||
Sbjct: 24304513 cgaggacggccccgtgttctgcgggctcaactcggatggttctcacttggtcacctgct 24304571

>gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genomic sequence, complete
             sequence
          Length = 171664

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 102/119 (85%), Gaps = 1/119 (0%)
 Strand = Plus / Minus

                                                                         
Query: 369   cttgctaccgagctgggcctatggcctcggctccatgggatccatctcggtgtcctacgg 428
             |||||| || || |||||||||||||| || |||||||  |||||| | |||||||||||
Sbjct: 76171 cttgctgcccagttgggcctatggccttggatccatggcgtccatcgccgtgtcctacgg 76112

                                                                        
Query: 429   cgaggacggtccggtgttctgcggcctcagctcggacggctc-cacttggtcgcctgct 486
             ||||||||| || ||||||||||| |||| |||||| || || ||||||||| ||||||
Sbjct: 76111 cgaggacggccccgtgttctgcgggctcaactcggatggttctcacttggtcacctgct 76053

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 102/119 (85%), Gaps = 1/119 (0%)
 Strand = Plus / Plus

                                                                            
Query: 369      cttgctaccgagctgggcctatggcctcggctccatgggatccatctcggtgtcctacgg 428
                |||||| || || |||||||||||||| || |||||||  |||||| | |||||||||||
Sbjct: 24221922 cttgctgcccagttgggcctatggccttggatccatggcgtccatcgccgtgtcctacgg 24221981

                                                                           
Query: 429      cgaggacggtccggtgttctgcggcctcagctcggacggctc-cacttggtcgcctgct 486
                ||||||||| || ||||||||||| |||| |||||| || || ||||||||| ||||||
Sbjct: 24221982 cgaggacggccccgtgttctgcgggctcaactcggatggttctcacttggtcacctgct 24222040

>dbj|AK101339.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J17, full
           insert sequence
          Length = 3772

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 102/119 (85%), Gaps = 1/119 (0%)
 Strand = Plus / Plus

                                                                       
Query: 369 cttgctaccgagctgggcctatggcctcggctccatgggatccatctcggtgtcctacgg 428
           |||||| || || |||||||||||||| || |||||||  |||||| | |||||||||||
Sbjct: 718 cttgctgcccagttgggcctatggccttggatccatggcgtccatcgccgtgtcctacgg 777

                                                                      
Query: 429 cgaggacggtccggtgttctgcggcctcagctcggacggctc-cacttggtcgcctgct 486
           ||||||||| || ||||||||||| |||| |||||| || || ||||||||| ||||||
Sbjct: 778 cgaggacggccccgtgttctgcgggctcaactcggatggttctcacttggtcacctgct 836

>dbj|AB057787.1| Oryza sativa OsCR4 gene, complete cds
          Length = 3859

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 102/119 (85%), Gaps = 1/119 (0%)
 Strand = Plus / Plus

                                                                       
Query: 369 cttgctaccgagctgggcctatggcctcggctccatgggatccatctcggtgtcctacgg 428
           |||||| || || |||||||||||||| || |||||||  |||||| | |||||||||||
Sbjct: 846 cttgctgcccagttgggcctatggccttggatccatggcgtccatcgccgtgtcctacgg 905

                                                                      
Query: 429 cgaggacggtccggtgttctgcggcctcagctcggacggctc-cacttggtcgcctgct 486
           ||||||||| || ||||||||||| |||| |||||| || || ||||||||| ||||||
Sbjct: 906 cgaggacggccccgtgttctgcgggctcaactcggatggttctcacttggtcacctgct 964

>gb|AY110360.1| Zea mays CL2011_1 mRNA sequence
          Length = 3324

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                       
Query: 380 gctgggcctatggcctcggctccatgggatccatctcggtgtcctacggcgaggacggtc 439
           ||||||||| |||||| |||||||||   |||||  |||||||||| || ||||| ||||
Sbjct: 215 gctgggcctgtggccttggctccatgtcgtccattgcggtgtcctatggggaggatggtc 274

                                           
Query: 440 cggtgttctgcggcctcagctcggacggctcc 471
           |||||||||| ||||||| ||| |||||||||
Sbjct: 275 cggtgttctgtggcctcaactccgacggctcc 306

>gb|U67422.1|ZMU67422 Zea mays CRINKLY4 precursor (cr4) mRNA, complete cds
          Length = 3346

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                       
Query: 380 gctgggcctatggcctcggctccatgggatccatctcggtgtcctacggcgaggacggtc 439
           ||||||||| |||||| |||||||||   |||||  |||||||||| || ||||| ||||
Sbjct: 215 gctgggcctgtggccttggctccatgtcgtccattgcggtgtcctatggggaggatggtc 274

                                           
Query: 440 cggtgttctgcggcctcagctcggacggctcc 471
           |||||||||| ||||||| ||| |||||||||
Sbjct: 275 cggtgttctgtggcctcaactccgacggctcc 306

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 62      ctctacctcgccgcctccgccgc 84
               |||||||||||||||||||||||
Sbjct: 2515244 ctctacctcgccgcctccgccgc 2515222

>ref|XM_468447.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1719

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 67  cctcgccgcctccgccgcgct 87
           |||||||||||||||||||||
Sbjct: 546 cctcgccgcctccgccgcgct 566

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 67      cctcgccgcctccgccgcgct 87
               |||||||||||||||||||||
Sbjct: 4550220 cctcgccgcctccgccgcgct 4550240

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 67       cctcgccgcctccgccgcgct 87
                |||||||||||||||||||||
Sbjct: 35286777 cctcgccgcctccgccgcgct 35286797

>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1119_A01
          Length = 108727

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 67    cctcgccgcctccgccgcgct 87
             |||||||||||||||||||||
Sbjct: 37111 cctcgccgcctccgccgcgct 37131

>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0474F11
          Length = 139544

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 67    cctcgccgcctccgccgcgct 87
             |||||||||||||||||||||
Sbjct: 98827 cctcgccgcctccgccgcgct 98847

>dbj|AK109819.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-A04, full
           insert sequence
          Length = 1928

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 67  cctcgccgcctccgccgcgct 87
           |||||||||||||||||||||
Sbjct: 119 cctcgccgcctccgccgcgct 139

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 67      cctcgccgcctccgccgcgct 87
               |||||||||||||||||||||
Sbjct: 4550201 cctcgccgcctccgccgcgct 4550221

>emb|AL928749.4|CNS08CBM Oryza sativa chromosome 12, . BAC OSJNBa0002O20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 129155

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 67    cctcgccgcctccgccgcgct 87
             |||||||||||||||||||||
Sbjct: 54558 cctcgccgcctccgccgcgct 54538

>gb|AC101948.10| Mus musculus chromosome 15, clone RP24-139K14, complete sequence
          Length = 182534

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     cctcagtcctctccactccc 60
              ||||||||||||||||||||
Sbjct: 120786 cctcagtcctctccactccc 120767

>gb|BT013231.1| Lycopersicon esculentum clone 134477R, mRNA sequence
          Length = 1652

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 78  ccgccgcgcttgttcctcccaacc 101
           |||||||||| |||||||||||||
Sbjct: 677 ccgccgcgctagttcctcccaacc 654

>gb|AC158776.5| Mus musculus chromosome 15, clone RP23-261G10, complete sequence
          Length = 192769

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     cctcagtcctctccactccc 60
              ||||||||||||||||||||
Sbjct: 173326 cctcagtcctctccactccc 173307

>ref|XM_747609.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g13320)
           partial mRNA
          Length = 1131

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 388 tatggcctcggctccatggg 407
           ||||||||||||||||||||
Sbjct: 199 tatggcctcggctccatggg 218

>gb|AC158567.3| Mus musculus chromosome 15, clone RP24-93F2, complete sequence
          Length = 188718

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    cctcagtcctctccactccc 60
             ||||||||||||||||||||
Sbjct: 97946 cctcagtcctctccactccc 97927

>gb|AC090894.10| Homo sapiens chromosome 17, clone RP11-744K17, complete sequence
          Length = 150680

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 38     agtcctcagtcctctccactcccc 61
              |||||||||||| |||||||||||
Sbjct: 141174 agtcctcagtcccctccactcccc 141197

>emb|BX649606.1| Aspergillus fumigatus BAC pilot project supercontig; segment 2/3
          Length = 348551

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 388    tatggcctcggctccatggg 407
              ||||||||||||||||||||
Sbjct: 243684 tatggcctcggctccatggg 243665

>gb|BC040673.1| Homo sapiens cDNA clone IMAGE:4817003
          Length = 1809

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 45  agtcctctccactccccctc 64
           ||||||||||||||||||||
Sbjct: 958 agtcctctccactccccctc 977

>gb|AC027449.6| Homo sapiens chromosome 18, clone RP11-535A5, complete sequence
          Length = 149660

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 44    cagtcctctccactccccctctacctcg 71
             ||||||||||||||||| ||||| ||||
Sbjct: 52577 cagtcctctccactccctctctagctcg 52604

>gb|U21310.1| Caenorhabditis elegans cosmid F40H6, complete sequence
          Length = 32481

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    tcagtcctctccactccccc 62
             ||||||||||||||||||||
Sbjct: 25678 tcagtcctctccactccccc 25697

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 61       cctctacctcgccgcctccgccgc 84
                |||| |||||||||||||||||||
Sbjct: 14988242 cctccacctcgccgcctccgccgc 14988219

>gb|AC024361.21| Homo sapiens chromosome 17, clone RP11-388C12, complete sequence
          Length = 111473

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 45  agtcctctccactccccctc 64
           ||||||||||||||||||||
Sbjct: 973 agtcctctccactccccctc 992

>gb|AC124283.11| Homo sapiens chromosome 17, clone RP13-638C3, complete sequence
          Length = 143744

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 45     agtcctctccactccccctc 64
              ||||||||||||||||||||
Sbjct: 140203 agtcctctccactccccctc 140222

>gb|AC151756.2| Ornithorhynchus anatinus chromosome UNK clone OABb-466P24, complete
             sequence
          Length = 156508

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 47    tcctctccactccccctctacctc 70
             ||||||||||||||||||| ||||
Sbjct: 89071 tcctctccactccccctctccctc 89048

>dbj|AP005429.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0701F11
          Length = 154950

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 61    cctctacctcgccgcctccgccgc 84
             |||| |||||||||||||||||||
Sbjct: 57688 cctccacctcgccgcctccgccgc 57665

>emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right terminal inverted repeat
          Length = 243019

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 420   gtcctacggcgaggacggtccggt 443
             ||||| ||||||||||||||||||
Sbjct: 27812 gtccttcggcgaggacggtccggt 27835

>emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left terminal inverted repeat
          Length = 273746

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 420   gtcctacggcgaggacggtccggt 443
             ||||| ||||||||||||||||||
Sbjct: 27812 gtccttcggcgaggacggtccggt 27835

>gb|AC087575.11| Homo sapiens chromosome 17, clone RP11-305L6, complete sequence
          Length = 198756

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 38    agtcctcagtcctctccactcccc 61
             |||||||||||| |||||||||||
Sbjct: 47583 agtcctcagtcccctccactcccc 47606


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,439,460
Number of Sequences: 3902068
Number of extensions: 2439460
Number of successful extensions: 54865
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54424
Number of HSP's gapped (non-prelim): 441
length of query: 492
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 470
effective length of database: 17,147,199,772
effective search space: 8059183892840
effective search space used: 8059183892840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)