ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl26c04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_469640.1| Oryza sativa (japonica cultivar-group), mRNA 416 e-113
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 416 e-113
3gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa... 416 e-113
4gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genom... 416 e-113
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 416 e-113
6gb|AY371488.1| Zea mays clone BAC 276N12-123C01, partial sequence 373 e-100
7gb|AF123535.1| Zea mays alcohol dehydrogenase 1 (adh1) gene, adh... 373 e-100
8gb|AY691949.1| Zea mays alcohol dehydrogenase 1 (adh1A) gene, co... 373 e-100
9gb|AF124045.1| Sorghum bicolor BAC clone 110K5, partial sequence 357 2e-95
10gb|AC092896.9| Homo sapiens 3 BAC RP11-274J15 (Roswell Park Canc... 42 1.6
11gb|AC021733.12| Homo sapiens chromosome 8, clone RP11-775B15, co... 42 1.6
12gb|AC090451.6| Homo sapiens chromosome 8, clone RP11-318N11, com... 42 1.6
13gb|AC160402.8| Mus musculus 10 BAC RP23-115L17 (Roswell Park Can... 42 1.6
14gb|AC141471.4| Mus musculus BAC clone RP24-326K11 from 18, compl... 42 1.6
15emb|AL158152.18| Human DNA sequence from clone RP11-2B6 on chrom... 40 6.2
16emb|AL139818.15| Human DNA sequence from clone RP11-311B18 on ch... 40 6.2
17emb|Z99110.2|BSUB0007 Bacillus subtilis complete genome (section... 40 6.2
18emb|AL162459.2|ATF16L2 Arabidopsis thaliana DNA chromosome 3, BA... 40 6.2
19emb|AJ720973.1| Gallus gallus mRNA for hypothetical protein, clo... 40 6.2
20gb|AC159710.9| Mus musculus 10 BAC RP24-325N16 (Roswell Park Can... 40 6.2
21dbj|AB016879.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 6.2
22emb|AL731871.12| Mouse DNA sequence from clone RP23-111J19 on ch... 40 6.2

>ref|XM_469640.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1013

 Score =  416 bits (210), Expect = e-113
 Identities = 348/394 (88%)
 Strand = Plus / Plus

                                                                       
Query: 11  cagaatgctttggagcagttggcgtccattgatctcattgagctgagcaaggaggctaga 70
           |||||||||||||||||| |||| ||||||||||||||||| ||  ||||||||||||||
Sbjct: 348 cagaatgctttggagcagctggcatccattgatctcattgaactatgcaaggaggctaga 407

                                                                       
Query: 71  attgagcactgccgtgcaactagggacttgagtagctgcggccgctatgtgcaacatgtg 130
           |||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 408 attgagcattgccgtgcaactagggacttgagtagctgtggccgctatgtgcagcatgtg 467

                                                                       
Query: 131 ctcaactcatgtgggcatgcctcgttatgtgctgagtgtagccagagatgtgatgtctgc 190
           || |||||||| |||||||| || |||||||||||||| ||||| |||||||||||||||
Sbjct: 468 cttaactcatgcgggcatgcatccttatgtgctgagtgcagccaaagatgtgatgtctgc 527

                                                                       
Query: 191 ccaatttgcagaagtccaattcctgataatggaaaaagagtgcggctccgcctttaccac 250
           ||||||||||| || ||||| || || | ||| || || || || || ||||||||| ||
Sbjct: 528 ccaatttgcaggagcccaataccagacactgggaatagggttcgactacgcctttactac 587

                                                                       
Query: 251 aaatgcttggaggttggccttatctctaagcagcatgatgaaaggtttcaggaaaaggaa 310
           || ||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 aagtgcctggaagctggccttatctctaagcagcatgatgaaaggtttcaggaaaaggaa 647

                                                                       
Query: 311 ggccatggtgatcgtgttaacatggatgtccagcggctgcattccttgtttgatgttgca 370
           | |||| |||||| ||||||| |||| ||||| ||||| |||||||||||||||||||| 
Sbjct: 648 gaccatagtgatcctgttaacttggacgtccaacggctacattccttgtttgatgttgcc 707

                                             
Query: 371 cttcagactaatctggtttccctgatctgccact 404
           ||||| |  ||| |||  ||| ||||||||||||
Sbjct: 708 cttcaaaacaatttggcctccttgatctgccact 741



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 52/53 (98%)
 Strand = Plus / Plus

                                                                
Query: 410 acagatgtttgtttggatgaggatgctgtgtcaagtgatccacttctggcttt 462
           ||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 855 acagatgtttgtttggatgagaatgctgtgtcaagtgatccacttctggcttt 907



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  416 bits (210), Expect = e-113
 Identities = 348/394 (88%)
 Strand = Plus / Minus

                                                                            
Query: 11       cagaatgctttggagcagttggcgtccattgatctcattgagctgagcaaggaggctaga 70
                |||||||||||||||||| |||| ||||||||||||||||| ||  ||||||||||||||
Sbjct: 29930120 cagaatgctttggagcagctggcatccattgatctcattgaactatgcaaggaggctaga 29930061

                                                                            
Query: 71       attgagcactgccgtgcaactagggacttgagtagctgcggccgctatgtgcaacatgtg 130
                |||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 29930060 attgagcattgccgtgcaactagggacttgagtagctgtggccgctatgtgcagcatgtg 29930001

                                                                            
Query: 131      ctcaactcatgtgggcatgcctcgttatgtgctgagtgtagccagagatgtgatgtctgc 190
                || |||||||| |||||||| || |||||||||||||| ||||| |||||||||||||||
Sbjct: 29930000 cttaactcatgcgggcatgcatccttatgtgctgagtgcagccaaagatgtgatgtctgc 29929941

                                                                            
Query: 191      ccaatttgcagaagtccaattcctgataatggaaaaagagtgcggctccgcctttaccac 250
                ||||||||||| || ||||| || || | ||| || || || || || ||||||||| ||
Sbjct: 29929940 ccaatttgcaggagcccaataccagacactgggaatagggttcgactacgcctttactac 29929881

                                                                            
Query: 251      aaatgcttggaggttggccttatctctaagcagcatgatgaaaggtttcaggaaaaggaa 310
                || ||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29929880 aagtgcctggaagctggccttatctctaagcagcatgatgaaaggtttcaggaaaaggaa 29929821

                                                                            
Query: 311      ggccatggtgatcgtgttaacatggatgtccagcggctgcattccttgtttgatgttgca 370
                | |||| |||||| ||||||| |||| ||||| ||||| |||||||||||||||||||| 
Sbjct: 29929820 gaccatagtgatcctgttaacttggacgtccaacggctacattccttgtttgatgttgcc 29929761

                                                  
Query: 371      cttcagactaatctggtttccctgatctgccact 404
                ||||| |  ||| |||  ||| ||||||||||||
Sbjct: 29929760 cttcaaaacaatttggcctccttgatctgccact 29929727



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 52/53 (98%)
 Strand = Plus / Minus

                                                                     
Query: 410      acagatgtttgtttggatgaggatgctgtgtcaagtgatccacttctggcttt 462
                ||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 29929613 acagatgtttgtttggatgagaatgctgtgtcaagtgatccacttctggcttt 29929561



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>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete
             sequence
          Length = 159661

 Score =  416 bits (210), Expect = e-113
 Identities = 348/394 (88%)
 Strand = Plus / Plus

                                                                         
Query: 11    cagaatgctttggagcagttggcgtccattgatctcattgagctgagcaaggaggctaga 70
             |||||||||||||||||| |||| ||||||||||||||||| ||  ||||||||||||||
Sbjct: 80486 cagaatgctttggagcagctggcatccattgatctcattgaactatgcaaggaggctaga 80545

                                                                         
Query: 71    attgagcactgccgtgcaactagggacttgagtagctgcggccgctatgtgcaacatgtg 130
             |||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 80546 attgagcattgccgtgcaactagggacttgagtagctgtggccgctatgtgcagcatgtg 80605

                                                                         
Query: 131   ctcaactcatgtgggcatgcctcgttatgtgctgagtgtagccagagatgtgatgtctgc 190
             || |||||||| |||||||| || |||||||||||||| ||||| |||||||||||||||
Sbjct: 80606 cttaactcatgcgggcatgcatccttatgtgctgagtgcagccaaagatgtgatgtctgc 80665

                                                                         
Query: 191   ccaatttgcagaagtccaattcctgataatggaaaaagagtgcggctccgcctttaccac 250
             ||||||||||| || ||||| || || | ||| || || || || || ||||||||| ||
Sbjct: 80666 ccaatttgcaggagcccaataccagacactgggaatagggttcgactacgcctttactac 80725

                                                                         
Query: 251   aaatgcttggaggttggccttatctctaagcagcatgatgaaaggtttcaggaaaaggaa 310
             || ||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80726 aagtgcctggaagctggccttatctctaagcagcatgatgaaaggtttcaggaaaaggaa 80785

                                                                         
Query: 311   ggccatggtgatcgtgttaacatggatgtccagcggctgcattccttgtttgatgttgca 370
             | |||| |||||| ||||||| |||| ||||| ||||| |||||||||||||||||||| 
Sbjct: 80786 gaccatagtgatcctgttaacttggacgtccaacggctacattccttgtttgatgttgcc 80845

                                               
Query: 371   cttcagactaatctggtttccctgatctgccact 404
             ||||| |  ||| |||  ||| ||||||||||||
Sbjct: 80846 cttcaaaacaatttggcctccttgatctgccact 80879



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 52/53 (98%)
 Strand = Plus / Plus

                                                                  
Query: 410   acagatgtttgtttggatgaggatgctgtgtcaagtgatccacttctggcttt 462
             ||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 80993 acagatgtttgtttggatgagaatgctgtgtcaagtgatccacttctggcttt 81045



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>gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genomic sequence, complete
             sequence
          Length = 139946

 Score =  416 bits (210), Expect = e-113
 Identities = 348/394 (88%)
 Strand = Plus / Minus

                                                                         
Query: 11    cagaatgctttggagcagttggcgtccattgatctcattgagctgagcaaggaggctaga 70
             |||||||||||||||||| |||| ||||||||||||||||| ||  ||||||||||||||
Sbjct: 96061 cagaatgctttggagcagctggcatccattgatctcattgaactatgcaaggaggctaga 96002

                                                                         
Query: 71    attgagcactgccgtgcaactagggacttgagtagctgcggccgctatgtgcaacatgtg 130
             |||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 96001 attgagcattgccgtgcaactagggacttgagtagctgtggccgctatgtgcagcatgtg 95942

                                                                         
Query: 131   ctcaactcatgtgggcatgcctcgttatgtgctgagtgtagccagagatgtgatgtctgc 190
             || |||||||| |||||||| || |||||||||||||| ||||| |||||||||||||||
Sbjct: 95941 cttaactcatgcgggcatgcatccttatgtgctgagtgcagccaaagatgtgatgtctgc 95882

                                                                         
Query: 191   ccaatttgcagaagtccaattcctgataatggaaaaagagtgcggctccgcctttaccac 250
             ||||||||||| || ||||| || || | ||| || || || || || ||||||||| ||
Sbjct: 95881 ccaatttgcaggagcccaataccagacactgggaatagggttcgactacgcctttactac 95822

                                                                         
Query: 251   aaatgcttggaggttggccttatctctaagcagcatgatgaaaggtttcaggaaaaggaa 310
             || ||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95821 aagtgcctggaagctggccttatctctaagcagcatgatgaaaggtttcaggaaaaggaa 95762

                                                                         
Query: 311   ggccatggtgatcgtgttaacatggatgtccagcggctgcattccttgtttgatgttgca 370
             | |||| |||||| ||||||| |||| ||||| ||||| |||||||||||||||||||| 
Sbjct: 95761 gaccatagtgatcctgttaacttggacgtccaacggctacattccttgtttgatgttgcc 95702

                                               
Query: 371   cttcagactaatctggtttccctgatctgccact 404
             ||||| |  ||| |||  ||| ||||||||||||
Sbjct: 95701 cttcaaaacaatttggcctccttgatctgccact 95668



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 52/53 (98%)
 Strand = Plus / Minus

                                                                  
Query: 410   acagatgtttgtttggatgaggatgctgtgtcaagtgatccacttctggcttt 462
             ||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 95554 acagatgtttgtttggatgagaatgctgtgtcaagtgatccacttctggcttt 95502



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  416 bits (210), Expect = e-113
 Identities = 348/394 (88%)
 Strand = Plus / Minus

                                                                            
Query: 11       cagaatgctttggagcagttggcgtccattgatctcattgagctgagcaaggaggctaga 70
                |||||||||||||||||| |||| ||||||||||||||||| ||  ||||||||||||||
Sbjct: 30021542 cagaatgctttggagcagctggcatccattgatctcattgaactatgcaaggaggctaga 30021483

                                                                            
Query: 71       attgagcactgccgtgcaactagggacttgagtagctgcggccgctatgtgcaacatgtg 130
                |||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 30021482 attgagcattgccgtgcaactagggacttgagtagctgtggccgctatgtgcagcatgtg 30021423

                                                                            
Query: 131      ctcaactcatgtgggcatgcctcgttatgtgctgagtgtagccagagatgtgatgtctgc 190
                || |||||||| |||||||| || |||||||||||||| ||||| |||||||||||||||
Sbjct: 30021422 cttaactcatgcgggcatgcatccttatgtgctgagtgcagccaaagatgtgatgtctgc 30021363

                                                                            
Query: 191      ccaatttgcagaagtccaattcctgataatggaaaaagagtgcggctccgcctttaccac 250
                ||||||||||| || ||||| || || | ||| || || || || || ||||||||| ||
Sbjct: 30021362 ccaatttgcaggagcccaataccagacactgggaatagggttcgactacgcctttactac 30021303

                                                                            
Query: 251      aaatgcttggaggttggccttatctctaagcagcatgatgaaaggtttcaggaaaaggaa 310
                || ||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30021302 aagtgcctggaagctggccttatctctaagcagcatgatgaaaggtttcaggaaaaggaa 30021243

                                                                            
Query: 311      ggccatggtgatcgtgttaacatggatgtccagcggctgcattccttgtttgatgttgca 370
                | |||| |||||| ||||||| |||| ||||| ||||| |||||||||||||||||||| 
Sbjct: 30021242 gaccatagtgatcctgttaacttggacgtccaacggctacattccttgtttgatgttgcc 30021183

                                                  
Query: 371      cttcagactaatctggtttccctgatctgccact 404
                ||||| |  ||| |||  ||| ||||||||||||
Sbjct: 30021182 cttcaaaacaatttggcctccttgatctgccact 30021149



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 52/53 (98%)
 Strand = Plus / Minus

                                                                     
Query: 410      acagatgtttgtttggatgaggatgctgtgtcaagtgatccacttctggcttt 462
                ||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 30021035 acagatgtttgtttggatgagaatgctgtgtcaagtgatccacttctggcttt 30020983



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>gb|AY371488.1| Zea mays clone BAC 276N12-123C01, partial sequence
          Length = 213888

 Score =  373 bits (188), Expect = e-100
 Identities = 317/360 (88%)
 Strand = Plus / Plus

                                                                          
Query: 11     cagaatgctttggagcagttggcgtccattgatctcattgagctgagcaaggaggctaga 70
              ||||||||||||||||||||||| ||||||||||||||||||||  |||||||||| |||
Sbjct: 185164 cagaatgctttggagcagttggcatccattgatctcattgagctatgcaaggaggccaga 185223

                                                                          
Query: 71     attgagcactgccgtgcaactagggacttgagtagctgcggccgctatgtgcaacatgtg 130
              ||||||| ||||||||||||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 185224 attgagcgctgccgtgcaactagagacttgagtagctgtggccgctatgtgcatcatgtg 185283

                                                                          
Query: 131    ctcaactcatgtgggcatgcctcgttatgtgctgagtgtagccagagatgtgatgtctgc 190
              || ||||||||||| |||||||| ||||||||||| || ||||| ||||| || ||||||
Sbjct: 185284 cttaactcatgtggccatgcctcattatgtgctgaatgcagccaaagatgcgacgtctgc 185343

                                                                          
Query: 191    ccaatttgcagaagtccaattcctgataatggaaaaagagtgcggctccgcctttaccac 250
              ||||||||||| |||||||| || || |||||||| || || | ||| || |||||| ||
Sbjct: 185344 ccaatttgcaggagtccaataccggacaatggaaacagggttcagctacgtctttactac 185403

                                                                          
Query: 251    aaatgcttggaggttggccttatctctaagcagcatgatgaaaggtttcaggaaaaggaa 310
              || ||| |||| |  |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 185404 aagtgcctggaagagggccttatttctaagcagcacgatgaaaggtttcaggaaaaggaa 185463

                                                                          
Query: 311    ggccatggtgatcgtgttaacatggatgtccagcggctgcattccttgtttgatgttgca 370
              | ||||||  |||  |||| |||||||||||||| ||||||||| ||||| |||||||||
Sbjct: 185464 gaccatggcaatccagttagcatggatgtccagcagctgcattcattgttcgatgttgca 185523



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 56/58 (96%)
 Strand = Plus / Plus

                                                                        
Query: 405    atataacagatgtttgtttggatgaggatgctgtgtcaagtgatccacttctggcttt 462
              |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 185634 atatcacagatgtttgtttggatgagaatgctgtgtcaagtgatccacttctggcttt 185691



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>gb|AF123535.1| Zea mays alcohol dehydrogenase 1 (adh1) gene, adh1-F allele, complete cds
          Length = 160480

 Score =  373 bits (188), Expect = e-100
 Identities = 317/360 (88%)
 Strand = Plus / Plus

                                                                          
Query: 11     cagaatgctttggagcagttggcgtccattgatctcattgagctgagcaaggaggctaga 70
              |||||||| |||||||||||||| |||||||||||||| |||||  |||||||||| |||
Sbjct: 112693 cagaatgcgttggagcagttggcatccattgatctcatcgagctatgcaaggaggccaga 112752

                                                                          
Query: 71     attgagcactgccgtgcaactagggacttgagtagctgcggccgctatgtgcaacatgtg 130
              ||||||| ||||||||||||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 112753 attgagcgctgccgtgcaactagagacttgagtagctgtggccgctatgtgcaccatgtg 112812

                                                                          
Query: 131    ctcaactcatgtgggcatgcctcgttatgtgctgagtgtagccagagatgtgatgtctgc 190
              || ||||||||||| |||||||| |||||||||||||| ||||| |||||||| ||||||
Sbjct: 112813 cttaactcatgtggccatgcctcattatgtgctgagtgcagccaaagatgtgacgtctgc 112872

                                                                          
Query: 191    ccaatttgcagaagtccaattcctgataatggaaaaagagtgcggctccgcctttaccac 250
              ||||| ||||| ||||||||  | || |||||||| || || | ||| || |||||| ||
Sbjct: 112873 ccaatctgcaggagtccaatatcggacaatggaaatagggttcagctacgtctttactac 112932

                                                                          
Query: 251    aaatgcttggaggttggccttatctctaagcagcatgatgaaaggtttcaggaaaaggaa 310
              || ||| |||| |  |||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 112933 aagtgcctggaagcgggccttatttctaagcagcacgatgacaggtttcaggaaaaggaa 112992

                                                                          
Query: 311    ggccatggtgatcgtgttaacatggatgtccagcggctgcattccttgtttgatgttgca 370
              | ||||||  ||| ||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 112993 gaccatggcaatcctgttagcatggatgtccagcggctgcattcattgtttgatgttgca 113052



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 56/58 (96%)
 Strand = Plus / Plus

                                                                        
Query: 405    atataacagatgtttgtttggatgaggatgctgtgtcaagtgatccacttctggcttt 462
              |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 113163 atatcacagatgtttgtttggatgagaatgctgtgtcaagtgatccacttctggcttt 113220



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>gb|AY691949.1| Zea mays alcohol dehydrogenase 1 (adh1A) gene, complete cds; Fourf
             copia_LTR and Huck gypsy_LTR retrotransposons, complete
             sequence; Opie2 copia_LTR retrotransposon Zeon gypsy_LTR
             and Opie1 copia_LTR retrotransposons, complete sequence;
             Ji copia_LTR retrotransposon, complete sequence; and
             unknown protein (adh1B), cyclin H-1 (adh1C), unknown
             protein (adh1D), hypothetical protein (adh1E), and unknown
             protein (adh1F) genes, complete cds
          Length = 126039

 Score =  373 bits (188), Expect = e-100
 Identities = 317/360 (88%)
 Strand = Plus / Plus

                                                                         
Query: 11    cagaatgctttggagcagttggcgtccattgatctcattgagctgagcaaggaggctaga 70
             |||||||| |||||||||||||| |||||||||||||| |||||  |||||||||| |||
Sbjct: 96024 cagaatgcgttggagcagttggcatccattgatctcatcgagctatgcaaggaggccaga 96083

                                                                         
Query: 71    attgagcactgccgtgcaactagggacttgagtagctgcggccgctatgtgcaacatgtg 130
             ||||||| ||||||||||||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 96084 attgagcgctgccgtgcaactagagacttgagtagctgtggccgctatgtgcaccatgtg 96143

                                                                         
Query: 131   ctcaactcatgtgggcatgcctcgttatgtgctgagtgtagccagagatgtgatgtctgc 190
             || ||||||||||| |||||||| |||||||||||||| ||||| |||||||| ||||||
Sbjct: 96144 cttaactcatgtggccatgcctcattatgtgctgagtgcagccaaagatgtgacgtctgc 96203

                                                                         
Query: 191   ccaatttgcagaagtccaattcctgataatggaaaaagagtgcggctccgcctttaccac 250
             ||||| ||||| ||||||||  | || |||||||| || || | ||| || |||||| ||
Sbjct: 96204 ccaatctgcaggagtccaatatcggacaatggaaatagggttcagctacgtctttactac 96263

                                                                         
Query: 251   aaatgcttggaggttggccttatctctaagcagcatgatgaaaggtttcaggaaaaggaa 310
             || ||| |||| |  |||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 96264 aagtgcctggaagcgggccttatttctaagcagcacgatgacaggtttcaggaaaaggaa 96323

                                                                         
Query: 311   ggccatggtgatcgtgttaacatggatgtccagcggctgcattccttgtttgatgttgca 370
             | ||||||  ||| ||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 96324 gaccatggcaatcctgttagcatggatgtccagcggctgcattcattgtttgatgttgca 96383



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 56/58 (96%)
 Strand = Plus / Plus

                                                                       
Query: 405   atataacagatgtttgtttggatgaggatgctgtgtcaagtgatccacttctggcttt 462
             |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 96494 atatcacagatgtttgtttggatgagaatgctgtgtcaagtgatccacttctggcttt 96551



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>gb|AF124045.1| Sorghum bicolor BAC clone 110K5, partial sequence
          Length = 78195

 Score =  357 bits (180), Expect = 2e-95
 Identities = 315/360 (87%)
 Strand = Plus / Plus

                                                                         
Query: 11    cagaatgctttggagcagttggcgtccattgatctcattgagctgagcaaggaggctaga 70
             ||||||||||||||||||||||| |||||||||||||| |||||  |||||||||| |||
Sbjct: 51854 cagaatgctttggagcagttggcatccattgatctcatcgagctatgcaaggaggccaga 51913

                                                                         
Query: 71    attgagcactgccgtgcaactagggacttgagtagctgcggccgctatgtgcaacatgtg 130
             |||||||  |||||||||||||| |||||||||||||| ||||||||||| |  ||||||
Sbjct: 51914 attgagcgttgccgtgcaactagagacttgagtagctgtggccgctatgttcgtcatgtg 51973

                                                                         
Query: 131   ctcaactcatgtgggcatgcctcgttatgtgctgagtgtagccagagatgtgatgtctgc 190
             || ||||||||||| |||||||| |||||||||||||| ||||| ||||| ||  |||||
Sbjct: 51974 cttaactcatgtggccatgcctcattatgtgctgagtgcagccaaagatgcgacatctgc 52033

                                                                         
Query: 191   ccaatttgcagaagtccaattcctgataatggaaaaagagtgcggctccgcctttaccac 250
             ||||||||||| ||| |||| || || |||||||| || || ||||| || |||||| ||
Sbjct: 52034 ccaatttgcaggagttcaataccggacaatggaaatagggttcggctacgtctttactac 52093

                                                                         
Query: 251   aaatgcttggaggttggccttatctctaagcagcatgatgaaaggtttcaggaaaaggaa 310
             || |||||||| |  |||||||| ||||||||||| |||||||| |||||||||||||||
Sbjct: 52094 aagtgcttggaagcgggccttatttctaagcagcacgatgaaagatttcaggaaaaggaa 52153

                                                                         
Query: 311   ggccatggtgatcgtgttaacatggatgtccagcggctgcattccttgtttgatgttgca 370
             | ||||||  ||| ||||| |||||||||||||||||||||||| ||||| |||||||||
Sbjct: 52154 gaccatggcaatcctgttagcatggatgtccagcggctgcattcattgttcgatgttgca 52213



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Plus

                                                                       
Query: 405   atataacagatgtttgtttggatgaggatgctgtgtcaagtgatccacttctggcttt 462
             |||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 52330 atatcacagatgtttgtttggacgagaatgctgtgtcaagtgatccacttctggcttt 52387



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>gb|AC092896.9| Homo sapiens 3 BAC RP11-274J15 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 170330

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 297  ttcaggaaaaggaaggccatg 317
            |||||||||||||||||||||
Sbjct: 5623 ttcaggaaaaggaaggccatg 5603



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>gb|AC021733.12| Homo sapiens chromosome 8, clone RP11-775B15, complete sequence
          Length = 158341

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 213   ctgataatggaaaaagagtgc 233
             |||||||||||||||||||||
Sbjct: 30613 ctgataatggaaaaagagtgc 30593



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>gb|AC090451.6| Homo sapiens chromosome 8, clone RP11-318N11, complete sequence
          Length = 160671

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 213    ctgataatggaaaaagagtgc 233
              |||||||||||||||||||||
Sbjct: 142421 ctgataatggaaaaagagtgc 142401



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>gb|AC160402.8| Mus musculus 10 BAC RP23-115L17 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 224566

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 440    tcaagtgatccacttctggct 460
              |||||||||||||||||||||
Sbjct: 150831 tcaagtgatccacttctggct 150851



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>gb|AC141471.4| Mus musculus BAC clone RP24-326K11 from 18, complete sequence
          Length = 216048

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 174   agagatgtgatgtctgcccaatttgcaga 202
             ||||||||||||||||||| |||| ||||
Sbjct: 79233 agagatgtgatgtctgccccatttacaga 79205



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>emb|AL158152.18| Human DNA sequence from clone RP11-2B6 on chromosome 9q22.2-31.1
             Contains a novel gene and a CpG island, complete sequence
          Length = 114517

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   gctgagtgtagccagagatg 180
             ||||||||||||||||||||
Sbjct: 21515 gctgagtgtagccagagatg 21534



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>emb|AL139818.15| Human DNA sequence from clone RP11-311B18 on chromosome 10 Contains a
             novel gene, complete sequence
          Length = 103124

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   cagagatgtgatgtctgccc 192
             ||||||||||||||||||||
Sbjct: 64814 cagagatgtgatgtctgccc 64833



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>emb|Z99110.2|BSUB0007 Bacillus subtilis complete genome (section 7 of 21): from 1209742 to
             1410982
          Length = 201241

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 212   cctgataatggaaaaagagtgcgg 235
             |||||| |||||||||||||||||
Sbjct: 68600 cctgatgatggaaaaagagtgcgg 68623



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>emb|AL162459.2|ATF16L2 Arabidopsis thaliana DNA chromosome 3, BAC clone F16L2
          Length = 111338

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 208   aattcctgataatggaaaaa 227
             ||||||||||||||||||||
Sbjct: 58046 aattcctgataatggaaaaa 58065



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>emb|AJ720973.1| Gallus gallus mRNA for hypothetical protein, clone 31i7
          Length = 3174

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 433  tgctgtgtcaagtgatccac 452
            ||||||||||||||||||||
Sbjct: 1329 tgctgtgtcaagtgatccac 1310



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>gb|AC159710.9| Mus musculus 10 BAC RP24-325N16 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 204302

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 415   tgtttgtttggatgaggatgctgt 438
             |||||||||||||||||| |||||
Sbjct: 53823 tgtttgtttggatgaggaagctgt 53800



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>dbj|AB016879.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRB17
          Length = 75744

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 417   tttgtttggatgaggatgctgtgtcaag 444
             ||||||||||||||| |||| |||||||
Sbjct: 35625 tttgtttggatgaggttgctctgtcaag 35652



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>emb|AL731871.12| Mouse DNA sequence from clone RP23-111J19 on chromosome 2, complete
              sequence
          Length = 195003

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 421    tttggatgaggatgctgtgtcaag 444
              ||||||||||||||||||| ||||
Sbjct: 180163 tttggatgaggatgctgtggcaag 180186


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,459,266
Number of Sequences: 3902068
Number of extensions: 4459266
Number of successful extensions: 75772
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75695
Number of HSP's gapped (non-prelim): 72
length of query: 462
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 440
effective length of database: 17,147,199,772
effective search space: 7544767899680
effective search space used: 7544767899680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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