>HYUB_PSESN (Q01263) Hydantoin utilization protein B (ORF3)|
          Length = 592

 Score = 30.8 bits (68), Expect = 0.83
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -2

Query: 118 HEAPLHGDHHGRRVGFRVPLIQRCEP*GF 32
           H +P HG  HG  VGF +P+  + E  GF
Sbjct: 101 HNSPYHGASHGPDVGFCIPVFYKDELIGF 129

>FOXGB_RAT (Q00939) Forkhead box protein G1B (Forkhead-related protein FKHL1)|
           (Transcription factor BF-1) (Brain factor 1) (BF1)
          Length = 480

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
 Frame = +2

Query: 8   PPAIPKSPKALGL-AALDERHPKP--YPPAMVIAVEGSFVHQDEGEDGDHPMRYLPLG 172
           PP  P+ P+A G  AA D++ P+P   PP+  +    +     +GE G  P    P+G
Sbjct: 75  PPPAPQPPQARGAPAADDDKGPQPLLLPPSAALDGAKADALGAKGEPGGGPAELAPVG 132

>FOXGB_MOUSE (Q60987) Forkhead box protein G1B (Forkhead-related protein FKHL1)|
           (Transcription factor BF-1) (Brain factor 1) (BF1)
          Length = 481

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
 Frame = +2

Query: 8   PPAIPKSPKALGL-AALDERHPKP--YPPAMVIAVEGSFVHQDEGEDGDHPMRYLPLG 172
           PP  P+ P+A G  AA D++ P+P   PP+  +    +     +GE G  P    P+G
Sbjct: 76  PPPAPQPPQARGAPAADDDKGPQPLLLPPSTALDGAKADALGAKGEPGGGPAELAPVG 133

>COAT_RTRV (Q91QZ8) Major capsid protein (MCP) (Major structural protein)|
           (MSP)
          Length = 463

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -3

Query: 132 PSSWCTKLPSTAITMAGG*GFGCRSSSAASPRA 34
           P  W TKLPS A  M+G   FG +  S   PR+
Sbjct: 42  PVGWFTKLPSLAAKMSGNPAFG-QQFSVGVPRS 73

>COAT_FRG3V (Q67473) Major capsid protein (MCP) (Major structural protein)|
           (MSP)
          Length = 463

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -3

Query: 132 PSSWCTKLPSTAITMAGG*GFGCRSSSAASPRA 34
           P  W TKLPS A  M+G   FG +  S   PR+
Sbjct: 42  PVGWFTKLPSLAAKMSGNPAFG-QQFSVGVPRS 73

>LEU2_PHYBL (P18250) 3-isopropylmalate dehydratase (EC 4.2.1.33)|
           (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI)
          Length = 744

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -3

Query: 105 STAITMAGG*GFGCRSSSAASPRAFGDLGI 16
           S+ I +  G  FGC SS   +P AF D GI
Sbjct: 583 SSKILVCTGPNFGCGSSREHAPWAFNDFGI 612


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.307    0.132    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,879,967
Number of Sequences: 219361
Number of extensions: 592172
Number of successful extensions: 1023
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1023
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 1396778976
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)