ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl26c03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_450167.1| Oryza sativa (japonica cultivar-group), mRNA 96 1e-16
2ref|XM_450166.1| Oryza sativa (japonica cultivar-group), mRNA 96 1e-16
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
4dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
5dbj|AP005582.3| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
6dbj|AK074022.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 1e-16
7dbj|AK065095.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 1e-16
8gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 46 0.082
9emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete ... 44 0.32
10ref|XM_477289.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.3
11gb|AF357202.1| Streptomyces nodosus amphotericin biosynthetic ge... 42 1.3
12emb|X14112.1|HE1CG Human herpesvirus 1 complete genome 42 1.3
13emb|AL691449.21| Human DNA sequence from clone RP11-558F24 on ch... 42 1.3
14emb|AL391244.11| Human DNA sequence from clone RP4-758J18 on chr... 42 1.3
15ref|XM_936514.1| PREDICTED: Homo sapiens similar to Ankyrin-1 (E... 42 1.3
16ref|XM_497648.2| PREDICTED: Homo sapiens similar to Ankyrin-1 (E... 42 1.3
17dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
18dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
19dbj|AB220991.1| Human herpesvirus 1 UL42 gene for DNA polymerase... 42 1.3
20dbj|AB220990.1| Human herpesvirus 1 UL42 gene for DNA polymerase... 42 1.3
21dbj|AB220989.1| Human herpesvirus 1 UL42 gene for DNA polymerase... 42 1.3
22dbj|AB220988.1| Human herpesvirus 1 UL42 gene for DNA polymerase... 42 1.3
23dbj|AB220987.1| Human herpesvirus 1 UL42 gene for DNA polymerase... 42 1.3
24dbj|AB220986.1| Human herpesvirus 1 UL42 gene for DNA polymerase... 42 1.3
25gb|M19121.1|HS1UL3 Herpes simplex virus type 1 UL42 gene, comple... 42 1.3
26dbj|AP004989.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
27dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
28dbj|AP005824.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
29emb|AL845548.7| Mouse DNA sequence from clone RP23-307N14 on chr... 42 1.3
30gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
31ref|XM_592305.2| PREDICTED: Bos taurus similar to Calsyntenin-1 ... 40 5.1
32emb|CT009713.8| Mouse DNA sequence from clone RP23-151C6 on chro... 40 5.1
33gb|AC018688.9| Homo sapiens BAC clone RP11-462H3 from UL, comple... 40 5.1
34emb|AL121904.13|HSDJ410C9 Human DNA sequence from clone RP3-410C... 40 5.1
35emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, ... 40 5.1
36emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete ... 40 5.1
37emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete ... 40 5.1
38gb|AC156374.3| Loxodonta africana clone VMRC15-462M16, complete ... 40 5.1
39ref|NM_205047.1| Gallus gallus non-metastatic cells 2, protein (... 40 5.1
40gb|DP000063.1| Oryctolagus cuniculus target 117 genomic scaffold 40 5.1
41gb|CP000249.1| Frankia sp. CcI3, complete genome 40 5.1
42gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 5.1
43dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
44dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
45gb|AC097532.3| Homo sapiens BAC clone RP11-725P16 from 2, comple... 40 5.1
46dbj|AP000057.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 40 5.1
47gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.1
48dbj|AP004753.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
49dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.1
50dbj|AP005837.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
51dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
52dbj|AP005609.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
53dbj|BS000192.1| Pan troglodytes chromosome 22 clone:PTB-125M11, ... 40 5.1
54gb|AC153537.4| Mus musculus 10 BAC RP23-283A2 (Roswell Park Canc... 40 5.1
55dbj|AK104595.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.1
56dbj|AK104046.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.1
57dbj|AK072560.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.1
58ref|NM_212414.1| Eremothecium gossypii AFR730Wp (AFR730W), mRNA 40 5.1
59dbj|AK066925.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.1
60dbj|AK061814.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.1
61dbj|AP001721.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 5.1
62dbj|AP000330.3| Homo sapiens genomic DNA, chromosome 21 clone:RP... 40 5.1
63gb|AF043542.1|AF043542 Gallus gallus nucleoside diphosphate kina... 40 5.1
64gb|AC137619.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
65dbj|AP000171.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 5.1 
>ref|XM_450167.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2944

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 113/135 (83%), Gaps = 6/135 (4%)
 Strand = Plus / Plus

                                                                       
Query: 86  gccatggtgatcgccgtggaggggagcttcgtgcaccaggacgagggggaggacggggac 145
           |||||||||||||| ||||||||| ||||||||||| ||||      |||||| | ||||
Sbjct: 212 gccatggtgatcgcggtggaggggggcttcgtgcacgagga------ggaggaggtggac 265

                                                                       
Query: 146 caccccatgcgctacctccccctcggccgcgtctactcatccaccgccccctgcccgccc 205
           ||||| || ||||||||||| || |||||||||||||| ||| | || || ||||| | |
Sbjct: 266 cacccaattcgctacctcccacttggccgcgtctactcctcctctgctccgtgccctctc 325

                          
Query: 206 cccaagaagccccgc 220
           |||||||||||||||
Sbjct: 326 cccaagaagccccgc 340



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                       
Query: 244 cggnaagccgnccgtgatcgtctactaccgccgncgccgcaagaagccgcggctcgagga 303
           ||| |||||  |||||||||||||||||||||| ||||| |||||||||||| |||||| 
Sbjct: 352 cggcaagccccccgtgatcgtctactaccgccgccgccgtaagaagccgcgggtcgaggg 411

                
Query: 304 gccac 308
           |||||
Sbjct: 412 gccac 416
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>ref|XM_450166.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3570

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 113/135 (83%), Gaps = 6/135 (4%)
 Strand = Plus / Plus

                                                                       
Query: 86  gccatggtgatcgccgtggaggggagcttcgtgcaccaggacgagggggaggacggggac 145
           |||||||||||||| ||||||||| ||||||||||| ||||      |||||| | ||||
Sbjct: 183 gccatggtgatcgcggtggaggggggcttcgtgcacgagga------ggaggaggtggac 236

                                                                       
Query: 146 caccccatgcgctacctccccctcggccgcgtctactcatccaccgccccctgcccgccc 205
           ||||| || ||||||||||| || |||||||||||||| ||| | || || ||||| | |
Sbjct: 237 cacccaattcgctacctcccacttggccgcgtctactcctcctctgctccgtgccctctc 296

                          
Query: 206 cccaagaagccccgc 220
           |||||||||||||||
Sbjct: 297 cccaagaagccccgc 311



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                       
Query: 244 cggnaagccgnccgtgatcgtctactaccgccgncgccgcaagaagccgcggctcgagga 303
           ||| |||||  |||||||||||||||||||||| ||||| |||||||||||| |||||| 
Sbjct: 323 cggcaagccccccgtgatcgtctactaccgccgccgccgtaagaagccgcgggtcgaggg 382

                
Query: 304 gccac 308
           |||||
Sbjct: 383 gccac 387
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 113/135 (83%), Gaps = 6/135 (4%)
 Strand = Plus / Minus

                                                                           
Query: 86      gccatggtgatcgccgtggaggggagcttcgtgcaccaggacgagggggaggacggggac 145
               |||||||||||||| ||||||||| ||||||||||| ||||      |||||| | ||||
Sbjct: 2562436 gccatggtgatcgcggtggaggggggcttcgtgcacgagga------ggaggaggtggac 2562383

                                                                           
Query: 146     caccccatgcgctacctccccctcggccgcgtctactcatccaccgccccctgcccgccc 205
               ||||| || ||||||||||| || |||||||||||||| ||| | || || ||||| | |
Sbjct: 2562382 cacccaattcgctacctcccacttggccgcgtctactcctcctctgctccgtgccctctc 2562323

                              
Query: 206     cccaagaagccccgc 220
               |||||||||||||||
Sbjct: 2562322 cccaagaagccccgc 2562308



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                           
Query: 244     cggnaagccgnccgtgatcgtctactaccgccgncgccgcaagaagccgcggctcgagga 303
               ||| |||||  |||||||||||||||||||||| ||||| |||||||||||| |||||| 
Sbjct: 2562296 cggcaagccccccgtgatcgtctactaccgccgccgccgtaagaagccgcgggtcgaggg 2562237

                    
Query: 304     gccac 308
               |||||
Sbjct: 2562236 gccac 2562232



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 312      cgtcctcgcccgcgacggcg 331
                ||||||||||||||||||||
Sbjct: 19660957 cgtcctcgcccgcgacggcg 19660976



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 343     ggaggagggggcgctgggcagggg 366
               |||||||| |||||||||||||||
Sbjct: 7482817 ggaggaggcggcgctgggcagggg 7482794
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>dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0406E03
          Length = 201069

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 113/135 (83%), Gaps = 6/135 (4%)
 Strand = Plus / Minus

                                                                          
Query: 86     gccatggtgatcgccgtggaggggagcttcgtgcaccaggacgagggggaggacggggac 145
              |||||||||||||| ||||||||| ||||||||||| ||||      |||||| | ||||
Sbjct: 149026 gccatggtgatcgcggtggaggggggcttcgtgcacgagga------ggaggaggtggac 148973

                                                                          
Query: 146    caccccatgcgctacctccccctcggccgcgtctactcatccaccgccccctgcccgccc 205
              ||||| || ||||||||||| || |||||||||||||| ||| | || || ||||| | |
Sbjct: 148972 cacccaattcgctacctcccacttggccgcgtctactcctcctctgctccgtgccctctc 148913

                             
Query: 206    cccaagaagccccgc 220
              |||||||||||||||
Sbjct: 148912 cccaagaagccccgc 148898



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                          
Query: 244    cggnaagccgnccgtgatcgtctactaccgccgncgccgcaagaagccgcggctcgagga 303
              ||| |||||  |||||||||||||||||||||| ||||| |||||||||||| |||||| 
Sbjct: 148886 cggcaagccccccgtgatcgtctactaccgccgccgccgtaagaagccgcgggtcgaggg 148827

                   
Query: 304    gccac 308
              |||||
Sbjct: 148826 gccac 148822
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>dbj|AP005582.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
            clone:P0006E02
          Length = 141782

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 113/135 (83%), Gaps = 6/135 (4%)
 Strand = Plus / Minus

                                                                        
Query: 86   gccatggtgatcgccgtggaggggagcttcgtgcaccaggacgagggggaggacggggac 145
            |||||||||||||| ||||||||| ||||||||||| ||||      |||||| | ||||
Sbjct: 7714 gccatggtgatcgcggtggaggggggcttcgtgcacgagga------ggaggaggtggac 7661

                                                                        
Query: 146  caccccatgcgctacctccccctcggccgcgtctactcatccaccgccccctgcccgccc 205
            ||||| || ||||||||||| || |||||||||||||| ||| | || || ||||| | |
Sbjct: 7660 cacccaattcgctacctcccacttggccgcgtctactcctcctctgctccgtgccctctc 7601

                           
Query: 206  cccaagaagccccgc 220
            |||||||||||||||
Sbjct: 7600 cccaagaagccccgc 7586



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 244  cggnaagccgnccgtgatcgtctactaccgccgncgccgcaagaagccgcggctcgagga 303
            ||| |||||  |||||||||||||||||||||| ||||| |||||||||||| |||||| 
Sbjct: 7574 cggcaagccccccgtgatcgtctactaccgccgccgccgtaagaagccgcgggtcgaggg 7515

                 
Query: 304  gccac 308
            |||||
Sbjct: 7514 gccac 7510
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>dbj|AK074022.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033074A15, full
           insert sequence
          Length = 3570

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 113/135 (83%), Gaps = 6/135 (4%)
 Strand = Plus / Plus

                                                                       
Query: 86  gccatggtgatcgccgtggaggggagcttcgtgcaccaggacgagggggaggacggggac 145
           |||||||||||||| ||||||||| ||||||||||| ||||      |||||| | ||||
Sbjct: 183 gccatggtgatcgcggtggaggggggcttcgtgcacgagga------ggaggaggtggac 236

                                                                       
Query: 146 caccccatgcgctacctccccctcggccgcgtctactcatccaccgccccctgcccgccc 205
           ||||| || ||||||||||| || |||||||||||||| ||| | || || ||||| | |
Sbjct: 237 cacccaattcgctacctcccacttggccgcgtctactcctcctctgctccgtgccctctc 296

                          
Query: 206 cccaagaagccccgc 220
           |||||||||||||||
Sbjct: 297 cccaagaagccccgc 311



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                       
Query: 244 cggnaagccgnccgtgatcgtctactaccgccgncgccgcaagaagccgcggctcgagga 303
           ||| |||||  |||||||||||||||||||||| ||||| |||||||||||| |||||| 
Sbjct: 323 cggcaagccccccgtgatcgtctactaccgccgccgccgtaagaagccgcgggtcgaggg 382

                
Query: 304 gccac 308
           |||||
Sbjct: 383 gccac 387
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>dbj|AK065095.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001M12, full
           insert sequence
          Length = 2944

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 113/135 (83%), Gaps = 6/135 (4%)
 Strand = Plus / Plus

                                                                       
Query: 86  gccatggtgatcgccgtggaggggagcttcgtgcaccaggacgagggggaggacggggac 145
           |||||||||||||| ||||||||| ||||||||||| ||||      |||||| | ||||
Sbjct: 212 gccatggtgatcgcggtggaggggggcttcgtgcacgagga------ggaggaggtggac 265

                                                                       
Query: 146 caccccatgcgctacctccccctcggccgcgtctactcatccaccgccccctgcccgccc 205
           ||||| || ||||||||||| || |||||||||||||| ||| | || || ||||| | |
Sbjct: 266 cacccaattcgctacctcccacttggccgcgtctactcctcctctgctccgtgccctctc 325

                          
Query: 206 cccaagaagccccgc 220
           |||||||||||||||
Sbjct: 326 cccaagaagccccgc 340



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                       
Query: 244 cggnaagccgnccgtgatcgtctactaccgccgncgccgcaagaagccgcggctcgagga 303
           ||| |||||  |||||||||||||||||||||| ||||| |||||||||||| |||||| 
Sbjct: 352 cggcaagccccccgtgatcgtctactaccgccgccgccgtaagaagccgcgggtcgaggg 411

                
Query: 304 gccac 308
           |||||
Sbjct: 412 gccac 416
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 180     actcatccaccgccccctgcccg 202
               |||||||||||||||||||||||
Sbjct: 1508101 actcatccaccgccccctgcccg 1508123
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>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29
          Length = 295150

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 123   aggacgagggggaggacgggga 144
             ||||||||||||||||||||||
Sbjct: 14976 aggacgagggggaggacgggga 14955
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>ref|XM_477289.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 336

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 84  cggccatggtgatcgccgtgg 104
           |||||||||||||||||||||
Sbjct: 161 cggccatggtgatcgccgtgg 141
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>gb|AF357202.1| Streptomyces nodosus amphotericin biosynthetic gene cluster, complete
             sequence
          Length = 113193

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 315   cctcgcccgcgacggcgccgc 335
             |||||||||||||||||||||
Sbjct: 23149 cctcgcccgcgacggcgccgc 23169
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>emb|X14112.1|HE1CG Human herpesvirus 1 complete genome
          Length = 152261

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 336   ggcagccggaggagggggcgc 356
             |||||||||||||||||||||
Sbjct: 93180 ggcagccggaggagggggcgc 93200
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>emb|AL691449.21| Human DNA sequence from clone RP11-558F24 on chromosome 1 Contains two
             novel genes, a ribosomal protein L26-like 1 pseudogene
             (RPL26L1), the PIK3CD gene for phosphoinositide-3-kinase,
             catalytic, delta polypeptide, the 3' end of the CLSTN1
             gene for calsyntenin 1 and a CpG island, complete sequence
          Length = 163934

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 189   ccgccccctgcccgcccccca 209
             |||||||||||||||||||||
Sbjct: 88698 ccgccccctgcccgcccccca 88678
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>emb|AL391244.11| Human DNA sequence from clone RP4-758J18 on chromosome 1p36.31-36.33
             Contains the 5' end of a novel gene, the CCNL2 gene for
             cyclin L2, the MRPL20 gene for mitochondrial ribosomal
             protein L20, nine novel genes and three CpG islands,
             complete sequence
          Length = 67923

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 223   ctccgcctccgctgccgcggg 243
             |||||||||||||||||||||
Sbjct: 36789 ctccgcctccgctgccgcggg 36769
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>ref|XM_936514.1| PREDICTED: Homo sapiens similar to Ankyrin-1 (Erythrocyte ankyrin)
           (LOC647448), mRNA
          Length = 1215

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 223 ctccgcctccgctgccgcggg 243
           |||||||||||||||||||||
Sbjct: 711 ctccgcctccgctgccgcggg 691
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>ref|XM_497648.2| PREDICTED: Homo sapiens similar to Ankyrin-1 (Erythrocyte ankyrin)
           (LOC441869), mRNA
          Length = 1023

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 223 ctccgcctccgctgccgcggg 243
           |||||||||||||||||||||
Sbjct: 519 ctccgcctccgctgccgcggg 499
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 84      cggccatggtgatcgccgtgg 104
               |||||||||||||||||||||
Sbjct: 8559108 cggccatggtgatcgccgtgg 8559088
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 330      cgccgcggcagccggaggagg 350
                |||||||||||||||||||||
Sbjct: 27806438 cgccgcggcagccggaggagg 27806418
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>dbj|AB220991.1| Human herpesvirus 1 UL42 gene for DNA polymerase processivity
           factor, complete cds, strain:BBY-V-1801
          Length = 1467

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 336 ggcagccggaggagggggcgc 356
           |||||||||||||||||||||
Sbjct: 68  ggcagccggaggagggggcgc 88
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>dbj|AB220990.1| Human herpesvirus 1 UL42 gene for DNA polymerase processivity
           factor, complete cds, strain:SYM-1843
          Length = 1467

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 336 ggcagccggaggagggggcgc 356
           |||||||||||||||||||||
Sbjct: 68  ggcagccggaggagggggcgc 88
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>dbj|AB220989.1| Human herpesvirus 1 UL42 gene for DNA polymerase processivity
           factor, complete cds, strain:KBS-C-1783
          Length = 1467

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 336 ggcagccggaggagggggcgc 356
           |||||||||||||||||||||
Sbjct: 68  ggcagccggaggagggggcgc 88
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>dbj|AB220988.1| Human herpesvirus 1 UL42 gene for DNA polymerase processivity
           factor, complete cds, strain:KBS-V-1782
          Length = 1467

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 336 ggcagccggaggagggggcgc 356
           |||||||||||||||||||||
Sbjct: 68  ggcagccggaggagggggcgc 88
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>dbj|AB220987.1| Human herpesvirus 1 UL42 gene for DNA polymerase processivity
           factor, complete cds, strain:YMS-1732
          Length = 1467

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 336 ggcagccggaggagggggcgc 356
           |||||||||||||||||||||
Sbjct: 68  ggcagccggaggagggggcgc 88
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>dbj|AB220986.1| Human herpesvirus 1 UL42 gene for DNA polymerase processivity
           factor, complete cds, strain:MTD-1730
          Length = 1467

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 336 ggcagccggaggagggggcgc 356
           |||||||||||||||||||||
Sbjct: 68  ggcagccggaggagggggcgc 88
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>gb|M19121.1|HS1UL3 Herpes simplex virus type 1 UL42 gene, complete cds
          Length = 1800

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 336 ggcagccggaggagggggcgc 356
           |||||||||||||||||||||
Sbjct: 308 ggcagccggaggagggggcgc 328
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>dbj|AP004989.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1153E06
          Length = 174588

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 330    cgccgcggcagccggaggagg 350
              |||||||||||||||||||||
Sbjct: 155693 cgccgcggcagccggaggagg 155673
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>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0710B08
          Length = 186991

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 330    cgccgcggcagccggaggagg 350
              |||||||||||||||||||||
Sbjct: 108947 cgccgcggcagccggaggagg 108927
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>dbj|AP005824.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0669H03
          Length = 167878

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 84    cggccatggtgatcgccgtgg 104
             |||||||||||||||||||||
Sbjct: 91576 cggccatggtgatcgccgtgg 91556
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>emb|AL845548.7| Mouse DNA sequence from clone RP23-307N14 on chromosome 2, complete
             sequence
          Length = 142263

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 187   caccgccccctgcccgccccc 207
             |||||||||||||||||||||
Sbjct: 33896 caccgccccctgcccgccccc 33876
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>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBa0065A15, complete sequence
          Length = 168806

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 312    cgtcctcgcccgcgacggcg 331
              ||||||||||||||||||||
Sbjct: 144032 cgtcctcgcccgcgacggcg 144051
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>ref|XM_592305.2| PREDICTED: Bos taurus similar to Calsyntenin-1 precursor (LOC514447),
            mRNA
          Length = 4393

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 123  aggacgagggggaggacggggacc 146
            |||||||||||||| |||||||||
Sbjct: 2975 aggacgagggggagcacggggacc 2998
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>emb|CT009713.8| Mouse DNA sequence from clone RP23-151C6 on chromosome 13, complete
              sequence
          Length = 217752

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 192    ccccctgcccgccccccaagaagc 215
              |||||| |||||||||||||||||
Sbjct: 205293 ccccctccccgccccccaagaagc 205270
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>gb|AC018688.9| Homo sapiens BAC clone RP11-462H3 from UL, complete sequence
          Length = 170204

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 341    ccggaggagggggcgctggg 360
              ||||||||||||||||||||
Sbjct: 136346 ccggaggagggggcgctggg 136327
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>emb|AL121904.13|HSDJ410C9 Human DNA sequence from clone RP3-410C9 on chromosome 20 Contains two
             novel genes and two CpG islands, complete sequence
          Length = 109849

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 341   ccggaggagggggcgctggg 360
             ||||||||||||||||||||
Sbjct: 66050 ccggaggagggggcgctggg 66069
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>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome
          Length = 5064019

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 11      cctgcaatccccaaatcccc 30
               ||||||||||||||||||||
Sbjct: 4724465 cctgcaatccccaaatcccc 4724446
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>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29
          Length = 309050

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 309   gcccgtcctcgcccgcgacg 328
             ||||||||||||||||||||
Sbjct: 63253 gcccgtcctcgcccgcgacg 63272
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>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29
          Length = 313800

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 312    cgtcctcgcccgcgacggcg 331
              ||||||||||||||||||||
Sbjct: 116809 cgtcctcgcccgcgacggcg 116828
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>gb|AC156374.3| Loxodonta africana clone VMRC15-462M16, complete sequence
          Length = 88098

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 199   cccgccccccaagaagccccgcagctcc 226
             ||||||||||| ||| ||||||||||||
Sbjct: 40840 cccgccccccatgaatccccgcagctcc 40813
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>ref|NM_205047.1| Gallus gallus non-metastatic cells 2, protein (NM23B) expressed in
           (NME2), mRNA
          Length = 638

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 216 cccgcagctccgcctccgctgccg 239
           |||||||||||||| |||||||||
Sbjct: 45  cccgcagctccgccgccgctgccg 22
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>gb|DP000063.1| Oryctolagus cuniculus target 117 genomic scaffold
          Length = 489372

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 355    gctgggcaggggctcgcggc 374
              ||||||||||||||||||||
Sbjct: 263893 gctgggcaggggctcgcggc 263874
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 123     aggacgagggggaggacggg 142
               ||||||||||||||||||||
Sbjct: 2950997 aggacgagggggaggacggg 2951016
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>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI,
               complete sequence
          Length = 1813164

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 325     gacggcgccgcggcagccggagga 348
               ||||||||||| ||||||||||||
Sbjct: 1781398 gacggcgccgctgcagccggagga 1781421
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 124      ggacgagggggaggacgggg 143
                ||||||||||||||||||||
Sbjct: 23531835 ggacgagggggaggacgggg 23531854
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 150      ccatgcgctacctccccctc 169
                ||||||||||||||||||||
Sbjct: 19955754 ccatgcgctacctccccctc 19955735
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>gb|AC097532.3| Homo sapiens BAC clone RP11-725P16 from 2, complete sequence
          Length = 190703

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 341   ccggaggagggggcgctggg 360
             ||||||||||||||||||||
Sbjct: 63313 ccggaggagggggcgctggg 63332
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>dbj|AP000057.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 28/28, complete
            sequence
          Length = 107897

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 131  ggggaggacggggaccaccc 150
            ||||||||||||||||||||
Sbjct: 3820 ggggaggacggggaccaccc 3839
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 321     ccgcgacggcgccgcggcagccgg 344
               |||||||||||||||||| |||||
Sbjct: 4790383 ccgcgacggcgccgcggcggccgg 4790360
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>dbj|AP004753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0508B05
          Length = 166165

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 150    ccatgcgctacctccccctc 169
              ||||||||||||||||||||
Sbjct: 133355 ccatgcgctacctccccctc 133336
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 319     gcccgcgacggcgccgcggc 338
               ||||||||||||||||||||
Sbjct: 4755262 gcccgcgacggcgccgcggc 4755243



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 315     cctcgcccgcgacggcgccgcggc 338
               ||||| ||||||||||||||||||
Sbjct: 4443722 cctcgaccgcgacggcgccgcggc 4443699
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>dbj|AP005837.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0024K20
          Length = 165041

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 343   ggaggagggggcgctgggcagggg 366
             |||||||| |||||||||||||||
Sbjct: 86621 ggaggaggcggcgctgggcagggg 86598
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>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
            clone:P0450E05
          Length = 176553

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 312  cgtcctcgcccgcgacggcg 331
            ||||||||||||||||||||
Sbjct: 6643 cgtcctcgcccgcgacggcg 6662
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>dbj|AP005609.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0014M17
          Length = 156778

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   ccatgcgctacctccccctc 169
             ||||||||||||||||||||
Sbjct: 59875 ccatgcgctacctccccctc 59856
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>dbj|BS000192.1| Pan troglodytes chromosome 22 clone:PTB-125M11, map 22, complete
              sequences
          Length = 189269

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    ggggaggacggggaccaccc 150
              ||||||||||||||||||||
Sbjct: 127017 ggggaggacggggaccaccc 127036
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>gb|AC153537.4| Mus musculus 10 BAC RP23-283A2 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 221267

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 128    gagggggaggacggggacca 147
              ||||||||||||||||||||
Sbjct: 125846 gagggggaggacggggacca 125827
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>dbj|AK104595.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-D09, full
           insert sequence
          Length = 983

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 312 cgtcctcgcccgcgacggcg 331
           ||||||||||||||||||||
Sbjct: 129 cgtcctcgcccgcgacggcg 148
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>dbj|AK104046.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-G06, full
           insert sequence
          Length = 1253

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 124 ggacgagggggaggacgggg 143
           ||||||||||||||||||||
Sbjct: 73  ggacgagggggaggacgggg 54
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>dbj|AK072560.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133B04, full
           insert sequence
          Length = 1512

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 124 ggacgagggggaggacgggg 143
           ||||||||||||||||||||
Sbjct: 218 ggacgagggggaggacgggg 199
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>ref|NM_212414.1| Eremothecium gossypii AFR730Wp (AFR730W), mRNA
          Length = 957

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 325 gacggcgccgcggcagccggagga 348
           ||||||||||| ||||||||||||
Sbjct: 327 gacggcgccgctgcagccggagga 350
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>dbj|AK066925.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092F14, full
           insert sequence
          Length = 1626

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 312 cgtcctcgcccgcgacggcg 331
           ||||||||||||||||||||
Sbjct: 301 cgtcctcgcccgcgacggcg 320
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>dbj|AK061814.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-B04, full
           insert sequence
          Length = 989

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 312 cgtcctcgcccgcgacggcg 331
           ||||||||||||||||||||
Sbjct: 169 cgtcctcgcccgcgacggcg 188
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>dbj|AP001721.1| Homo sapiens genomic DNA, chromosome 21q, section 65/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   ggggaggacggggaccaccc 150
             ||||||||||||||||||||
Sbjct: 45691 ggggaggacggggaccaccc 45710
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>dbj|AP000330.3| Homo sapiens genomic DNA, chromosome 21 clone:RP1-140K16, complete
              sequence
          Length = 170368

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    ggggaggacggggaccaccc 150
              ||||||||||||||||||||
Sbjct: 130280 ggggaggacggggaccaccc 130299
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>gb|AF043542.1|AF043542 Gallus gallus nucleoside diphosphate kinase (cNDPK) mRNA, complete
           cds
          Length = 638

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 216 cccgcagctccgcctccgctgccg 239
           |||||||||||||| |||||||||
Sbjct: 45  cccgcagctccgccgccgctgccg 22
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>gb|AC137619.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0095J22, complete sequence
          Length = 151730

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   ggacgagggggaggacgggg 143
             ||||||||||||||||||||
Sbjct: 69007 ggacgagggggaggacgggg 69026
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>dbj|AP000171.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             B2344F14-f50E8, segment 7/9, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   ggggaggacggggaccaccc 150
             ||||||||||||||||||||
Sbjct: 94450 ggggaggacggggaccaccc 94469


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,223,006
Number of Sequences: 3902068
Number of extensions: 2223006
Number of successful extensions: 49952
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48912
Number of HSP's gapped (non-prelim): 1040
length of query: 380
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 358
effective length of database: 17,147,199,772
effective search space: 6138697518376
effective search space used: 6138697518376
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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