Clone Information

BLAST Search Result

Clone Name	bastl26c01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ATX4_ARATH (Q9SUE7) Histone-lysine N-methyltransferase ATX4 (EC ...	36	0.054
2	NSD1_HUMAN (Q96L73) Histone-lysine N-methyltransferase, H3 lysin...	35	0.070
3	ATX5_ARATH (Q8GZ42) Histone-lysine N-methyltransferase ATX5 (EC ...	34	0.20
4	ATX3_ARATH (Q9M364) Histone-lysine N-methyltransferase ATX3 (EC ...	33	0.27
5	LSM4_ORYSA (Q9LGE6) Probable U6 snRNA-associated Sm-like protein...	33	0.27
6	DNM3A_HUMAN (Q9Y6K1) DNA (cytosine-5)-methyltransferase 3A (EC 2...	33	0.27
7	HDGR3_HUMAN (Q9Y3E1) Hepatoma-derived growth factor-related prot...	33	0.45
8	HDGR3_RAT (Q923W4) Hepatoma-derived growth factor-related protei...	33	0.45
9	HDGR3_MOUSE (Q9JMG7) Hepatoma-derived growth factor-related prot...	33	0.45
10	DNM3A_MOUSE (O88508) DNA (cytosine-5)-methyltransferase 3A (EC 2...	32	0.78
11	DNM3B_MOUSE (O88509) DNA (cytosine-5)-methyltransferase 3B (EC 2...	32	1.0
12	CAC1A_DROME (P91645) Voltage-dependent calcium channel type A al...	31	1.3
13	HORN_HUMAN (Q86YZ3) Hornerin	31	1.7
14	GAG_FSVGA (P03337) Gag polyprotein [Contains: Core protein p15; ...	31	1.7
15	SAPS1_HUMAN (Q9UPN7) SAPS domain family member 1	31	1.7
16	PODXL_RABIT (Q28645) Podocalyxin-like protein 1 precursor	31	1.7
17	LRBA_HUMAN (P50851) Lipopolysaccharide-responsive and beige-like...	31	1.7
18	IF2_LACLC (Q9X764) Translation initiation factor IF-2	30	2.3
19	TER_EUGGR (Q5EU90) Trans-2-enoyl-CoA reductase, mitochondrial pr...	30	2.3
20	IF2_LACLA (P58002) Translation initiation factor IF-2	30	2.3
21	HEX_ADE07 (P36851) Hexon protein (Late protein 2)	30	2.3
22	CORO_YEAST (Q06440) Coronin-like protein	30	2.9
23	NSD1_MOUSE (O88491) Histone-lysine N-methyltransferase, H3 lysin...	30	2.9
24	ARI1B_HUMAN (Q8NFD5) AT-rich interactive domain-containing prote...	30	2.9
25	TB182_MOUSE (P58871) 182 kDa tankyrase 1-binding protein (Fragment)	30	2.9
26	NADK2_ORYSA (Q53NI2) Probable NAD kinase 2, chloroplast precurso...	30	3.8
27	1B48_HUMAN (P30486) HLA class I histocompatibility antigen, B-48...	30	3.8
28	YQM4_SCHPO (Q9UU83) Protein P1E11.04c in chromosome III	30	3.8
29	TONB_PSEAE (Q51368) Protein tonB	30	3.8
30	MINT_HUMAN (Q96T58) Msx2-interacting protein (SPEN homolog) (SMA...	30	3.8
31	GAG_FSVST (P03338) Gag polyprotein [Contains: Core protein p15; ...	30	3.8
32	HNRPK_RAT (P61980) Heterogeneous nuclear ribonucleoprotein K (dC...	30	3.8
33	HNRPK_RABIT (O19049) Heterogeneous nuclear ribonucleoprotein K (...	30	3.8
34	HNRPK_MOUSE (P61979) Heterogeneous nuclear ribonucleoprotein K	30	3.8
35	HNRPK_HUMAN (P61978) Heterogeneous nuclear ribonucleoprotein K (...	30	3.8
36	UHRF2_MOUSE (Q7TMI3) Ubiquitin-like PHD and RING finger domain-c...	30	3.8
37	IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2	30	3.8
38	IF2_GLUOX (Q5FQM3) Translation initiation factor IF-2	30	3.8
39	SGS3_DROSI (P13729) Salivary glue protein Sgs-3 precursor	29	5.0
40	TACC1_MOUSE (Q6Y685) Transforming acidic coiled-coil-containing ...	29	5.0
41	NCOA6_MOUSE (Q9JL19) Nuclear receptor coactivator 6 (Amplified i...	29	5.0
42	EGR2B_BRARE (Q05159) Early growth response protein 2b (EGR-2b) (...	29	5.0
43	DNM3B_HUMAN (Q9UBC3) DNA (cytosine-5)-methyltransferase 3B (EC 2...	29	6.6
44	IF2_NEIMB (Q9JYD2) Translation initiation factor IF-2	29	6.6
45	PMA1_YEAST (P05030) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proto...	29	6.6
46	1B82_HUMAN (Q29718) HLA class I histocompatibility antigen, B-82...	29	6.6
47	1B81_HUMAN (Q31610) HLA class I histocompatibility antigen, B-81...	29	6.6
48	1B67_HUMAN (Q29836) HLA class I histocompatibility antigen, B-67...	29	6.6
49	1B59_HUMAN (Q29940) HLA class I histocompatibility antigen, B-59...	29	6.6
50	1B56_HUMAN (P30495) HLA class I histocompatibility antigen, B-56...	29	6.6
51	1B55_HUMAN (P30493) HLA class I histocompatibility antigen, B-55...	29	6.6
52	1B42_HUMAN (P30480) HLA class I histocompatibility antigen, B-42...	29	6.6
53	1B39_HUMAN (P30475) HLA class I histocompatibility antigen, B-39...	29	6.6
54	1B38_HUMAN (Q95365) HLA class I histocompatibility antigen, B-38...	29	6.6
55	1B27_HUMAN (P03989) HLA class I histocompatibility antigen, B-27...	29	6.6
56	1B14_HUMAN (P30462) HLA class I histocompatibility antigen, B-14...	29	6.6
57	1B08_HUMAN (P30460) HLA class I histocompatibility antigen, B-8 ...	29	6.6
58	1B07_HUMAN (P01889) HLA class I histocompatibility antigen, B-7 ...	29	6.6
59	GAG_FSVHZ (P04322) Gag polyprotein [Contains: Core protein p15; ...	29	6.6
60	CAC1G_RAT (O54898) Voltage-dependent T-type calcium channel alph...	29	6.6
61	1B73_HUMAN (Q31612) HLA class I histocompatibility antigen, B-73...	29	6.6
62	GA2L3_HUMAN (Q86XJ1) GAS2-like protein 3 (Growth arrest-specific...	29	6.6
63	CENPA_HUMAN (P49450) Centromere protein A (CENP-A) (Centromere a...	29	6.6
64	SFSB_SHIFL (P0ACH4) Sugar fermentation stimulation protein B (Ne...	29	6.6
65	SFSB_ECOLI (P0ACH1) Sugar fermentation stimulation protein B (Ne...	29	6.6
66	SFSB_ECOL6 (P0ACH2) Sugar fermentation stimulation protein B (Ne...	29	6.6
67	SFSB_ECO57 (P0ACH3) Sugar fermentation stimulation protein B (Ne...	29	6.6
68	MSH6_MOUSE (P54276) DNA mismatch repair protein MSH6 (MutS-alpha...	29	6.6
69	CAKI_DROME (Q24210) Calcium/calmodulin-dependent protein kinase ...	29	6.6
70	VGLL2_HUMAN (Q8N8G2) Transcription cofactor vestigial-like prote...	29	6.6
71	GAG_FLV (P10262) Gag polyprotein [Contains: Core protein p15; Co...	29	6.6
72	IF2_NEIMA (Q9JTB5) Translation initiation factor IF-2	28	8.6
73	GSCR2_HUMAN (Q9NZM5) Glioma tumor suppressor candidate region ge...	28	8.6
74	SC24A_MOUSE (Q3U2P1) Protein transport protein Sec24A (SEC24-rel...	28	8.6
75	GAG_FSVMD (P03340) Gag polyprotein [Contains: Core protein p15; ...	28	8.6
76	MIS_HUMAN (P03971) Muellerian-inhibiting factor precursor (MIS) ...	28	8.6
77	EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline...	28	8.6
78	1C02_HUMAN (P30501) HLA class I histocompatibility antigen, Cw-2...	28	8.6
79	PMA2_YEAST (P19657) Plasma membrane ATPase 2 (EC 3.6.3.6) (Proto...	28	8.6
80	DAAM1_MOUSE (Q8BPM0) Disheveled-associated activator of morphoge...	28	8.6
81	COIA1_MOUSE (P39061) Collagen alpha-1(XVIII) chain precursor [Co...	28	8.6
82	MSH6_HUMAN (P52701) DNA mismatch repair protein MSH6 (MutS-alpha...	28	8.6

>ATX4_ARATH (Q9SUE7) Histone-lysine N-methyltransferase ATX4 (EC 2.1.1.43)|
           (Trithorax-homolog protein 4) (TRX-homolog protein 4)
           (Trithorax 4) (Protein SET DOMAIN GROUP 16)
          Length = 990

 Score = 35.8 bits (81), Expect = 0.054
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +3

Query: 294 PQTLAAGELVWAKTKGRHHWWPARLHSPSTQSP 392
           P+   +G+LVWAK+     +WPA +  P TQ+P
Sbjct: 202 PENFYSGDLVWAKSGRNEPFWPAIVIDPMTQAP 234

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>NSD1_HUMAN (Q96L73) Histone-lysine N-methyltransferase, H3 lysine-36 and H4|
           lysine-20 specific (EC 2.1.1.43) (H3-K36-HMTase)
           (H4-K20-HMTase) (Nuclear receptor binding SET domain
           containing protein 1) (NR-binding SET domain containing
           protein) (Androgen r
          Length = 2696

 Score = 35.4 bits (80), Expect = 0.070
 Identities = 25/91 (27%), Positives = 35/91 (38%)
 Frame = +3

Query: 165 ISFHSKPKSDPTKPNQTKSDPSIQIDPSASHHPPAAMGTEDPEPQTLAAGELVWAKTKGR 344
           +SF   P S  +        P      S S   P     +   P     G+L+WAK K R
Sbjct: 276 LSFQDDPDSSTSTLGNMLELPGTS-SSSTSQELPFCQPKKKSTPLKYEVGDLIWAKFK-R 333

Query: 345 HHWWPARLHSPSTQSPLVSSLGAEYSDDHRP 437
             WWP R+ S     PL+++       + RP
Sbjct: 334 RPWWPCRICS----DPLINTHSKMKVSNRRP 360



 Score = 30.0 bits (66), Expect = 2.9
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 315  ELVWAKTKGRHHWWPARLHSP 377
            E+VW K  GR+ WWPA +  P
Sbjct: 1758 EIVWVKV-GRYRWWPAEICHP 1777

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>ATX5_ARATH (Q8GZ42) Histone-lysine N-methyltransferase ATX5 (EC 2.1.1.43)|
           (Trithorax-homolog protein 5) (TRX-homolog protein 5)
           (Protein SET DOMAIN GROUP 29)
          Length = 1043

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +3

Query: 294 PQTLAAGELVWAKTKGRHHWWPARLHSPSTQSP 392
           P+   +G+LVW K+     +WPA +  P TQ+P
Sbjct: 218 PEDFYSGDLVWGKSGRNEPFWPAIVIDPMTQAP 250

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>ATX3_ARATH (Q9M364) Histone-lysine N-methyltransferase ATX3 (EC 2.1.1.43)|
           (Trithorax-homolog protein 3) (TRX-homolog protein 3)
           (Protein SET DOMAIN GROUP 14)
          Length = 902

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +3

Query: 291 EPQTLAAGELVWAKTKGRHHWWPARLHSPSTQSP 392
           +P+    G+LVWAK   R   WPA +  P +Q+P
Sbjct: 183 KPEEFTVGDLVWAKCGKRFPAWPAVVIDPISQAP 216

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>LSM4_ORYSA (Q9LGE6) Probable U6 snRNA-associated Sm-like protein LSm4|
          Length = 147

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = +2

Query: 236 NRSIRKPPPAGRDGDGGSRAPNPSRRGAGLGQDQG 340
           +RS R+PP  GR    G     P  RG G GQD G
Sbjct: 86  SRSDRRPPGVGRGRGRGDIGTKPGGRGIGRGQDDG 120

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>DNM3A_HUMAN (Q9Y6K1) DNA (cytosine-5)-methyltransferase 3A (EC 2.1.1.37)|
           (Dnmt3a) (DNA methyltransferase HsaIIIA) (DNA MTase
           HsaIIIA) (M.HsaIIIA)
          Length = 909

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
 Frame = +3

Query: 189 SDPTKPNQTKSDPSIQIDPSASHHPPAAMGTEDPEPQT---LAAGELVWAKTKGRHHWWP 359
           +DP  P    +   +  D    +   A  G ++PE +       GELVW K +G   WWP
Sbjct: 248 TDPASPTVATTPEPVGSDAGDKNATKA--GDDEPEYEDGRGFGIGELVWGKLRG-FSWWP 304

Query: 360 ARLHS 374
            R+ S
Sbjct: 305 GRIVS 309

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>HDGR3_HUMAN (Q9Y3E1) Hepatoma-derived growth factor-related protein 3 (HRP-3)|
           (Hepatoma-derived growth factor 2)
          Length = 203

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +3

Query: 288 PEPQTLAAGELVWAKTKGRHHWWPARL 368
           P P+   AG+LV+AK KG  H WPAR+
Sbjct: 4   PRPREYKAGDLVFAKMKGYPH-WPARI 29

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>HDGR3_RAT (Q923W4) Hepatoma-derived growth factor-related protein 3 (HRP-3)|
          Length = 202

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +3

Query: 288 PEPQTLAAGELVWAKTKGRHHWWPARL 368
           P P+   AG+LV+AK KG  H WPAR+
Sbjct: 4   PRPREYKAGDLVFAKMKGYPH-WPARI 29

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>HDGR3_MOUSE (Q9JMG7) Hepatoma-derived growth factor-related protein 3 (HRP-3)|
          Length = 202

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +3

Query: 288 PEPQTLAAGELVWAKTKGRHHWWPARL 368
           P P+   AG+LV+AK KG  H WPAR+
Sbjct: 4   PRPREYKAGDLVFAKMKGYPH-WPARI 29

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>DNM3A_MOUSE (O88508) DNA (cytosine-5)-methyltransferase 3A (EC 2.1.1.37)|
           (Dnmt3a) (DNA methyltransferase MmuIIIA) (DNA MTase
           MmuIIIA) (M.MmuIIIA)
          Length = 908

 Score = 32.0 bits (71), Expect = 0.78
 Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
 Frame = +3

Query: 189 SDPTKPNQTKSDPSIQIDPSASHHPPAAMGTEDPEPQT-----LAAGELVWAKTKGRHHW 353
           +DP  P    +   +  D    +   AA    D EP+         GELVW K +G   W
Sbjct: 247 TDPASPTVATTPEPVGGDAGDKNATKAA----DDEPEYEDGRGFGIGELVWGKLRG-FSW 301

Query: 354 WPARLHS 374
           WP R+ S
Sbjct: 302 WPGRIVS 308

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>DNM3B_MOUSE (O88509) DNA (cytosine-5)-methyltransferase 3B (EC 2.1.1.37)|
           (Dnmt3b) (DNA methyltransferase MmuIIIB) (DNA MTase
           MmuIIIB) (M.MmuIIIB)
          Length = 859

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 19/66 (28%), Positives = 29/66 (43%)
 Frame = +3

Query: 177 SKPKSDPTKPNQTKSDPSIQIDPSASHHPPAAMGTEDPEPQTLAAGELVWAKTKGRHHWW 356
           S P  D ++    +   + Q+D  +         TE  + +    G+LVW K KG   WW
Sbjct: 192 STPSVDLSQDGDQEGMDTTQVDAESRDGD----STEYQDDKEFGIGDLVWGKIKG-FSWW 246

Query: 357 PARLHS 374
           PA + S
Sbjct: 247 PAMVVS 252

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>CAC1A_DROME (P91645) Voltage-dependent calcium channel type A alpha-1 subunit|
            (Cacophony protein) (Nightblind A protein)
            (No-on-transient B protein) (Dmca1A)
          Length = 1851

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -1

Query: 333  SWPRPAPRRLGFGARDPPSPSRPA 262
            S+P  A RR G G R PP+PS+P+
Sbjct: 1677 SYPTLASRRAGIGRRLPPTPSKPS 1700

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>HORN_HUMAN (Q86YZ3) Hornerin|
          Length = 2850

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 248  RKPPPAGRDGDGGSRAPNPSRRGAGLGQDQG 340
            R+ P  GR G G  R+ +  + G+GLG+  G
Sbjct: 2546 RQSPSYGRHGSGSGRSSSSGQHGSGLGESSG 2576



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 248  RKPPPAGRDGDGGSRAPNPSRRGAGLGQDQG 340
            R+ P  GR G G  R+ +  + G+GLG+  G
Sbjct: 1606 RQSPSYGRHGSGSGRSSSSGQHGSGLGESSG 1636



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 248  RKPPPAGRDGDGGSRAPNPSRRGAGLGQDQG 340
            R+ P  GR G G  R+ +  + G+GLG+  G
Sbjct: 1136 RQSPSYGRHGSGSGRSSSSGQHGSGLGESSG 1166



 Score = 30.0 bits (66), Expect = 2.9
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 248  RKPPPAGRDGDGGSRAPNPSRRGAGLGQDQG 340
            R+ P  GR G G  R+ +  + G GLG+  G
Sbjct: 2076 RQSPSYGRHGSGSGRSSSSGQHGPGLGESSG 2106



 Score = 29.3 bits (64), Expect = 5.0
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 257 PPAGRDGDGGSRAPNPSRRGAGLGQDQG 340
           P  GR G G  R+ +  R G+G GQ  G
Sbjct: 904 PSYGRHGSGSGRSSSSGRHGSGSGQSSG 931

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>GAG_FSVGA (P03337) Gag polyprotein [Contains: Core protein p15; Core protein|
           p12; Core protein p30]
          Length = 425

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = +3

Query: 183 PKSDPTKPNQTKSDPSIQIDPSASHHPPAAMGTEDPEP 296
           PKSDP KP     DPS  +    +  PP   G   P P
Sbjct: 208 PKSDPPKPPVLPPDPSSPLIDLLTEEPPPYPGGHGPPP 245

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>SAPS1_HUMAN (Q9UPN7) SAPS domain family member 1|
          Length = 881

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = +3

Query: 186 KSDPTKPNQTKSDPSIQIDPSASHHPP-AAMGTEDPEPQTLAAGELVWAKT 335
           +S P+  +    DPS  +  S +H PP    G + PEP  L   +   A T
Sbjct: 812 RSAPSSSDSATRDPSTSVPASGAHQPPQTTEGEKSPEPLGLPQSQSAQALT 862

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>PODXL_RABIT (Q28645) Podocalyxin-like protein 1 precursor|
          Length = 551

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 26/95 (27%), Positives = 38/95 (40%)
 Frame = +3

Query: 108 ISSNLQSFGLPLIFPRPALISFHSKPKSDPTKPNQTKSDPSIQIDPSASHHPPAAMGTED 287
           ++S+ ++ G+P   P          P S  + P  +   PS  + PS     P+A GTED
Sbjct: 235 VASSAETQGMPSPMP--------PSPASPSSSPFPSSPSPSPALQPSG----PSAAGTED 282

Query: 288 PEPQTLAAGELVWAKTKGRHHWWPARLHSPSTQSP 392
              +   +     A T          LH PST SP
Sbjct: 283 TTGRGPTSSSTELAST---------ALHGPSTLSP 308

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>LRBA_HUMAN (P50851) Lipopolysaccharide-responsive and beige-like anchor|
           protein (CDC4-like protein) (Beige-like protein)
          Length = 2863

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +2

Query: 245 IRKPPPAGRDGDGGSRAPNPSRRGA 319
           +  PPP G DG GG R   P+  GA
Sbjct: 8   VPSPPPTGDDGGGGGREETPTEGGA 32

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>IF2_LACLC (Q9X764) Translation initiation factor IF-2|
          Length = 950

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = +2

Query: 179 QTQIRPNQTKPNQIRSIHPNRSIRKPPPAGRDGDGGSRAPN--PSRRGAGLGQDQG 340
           Q   RP + K ++ R+   NR+  + P    +G G S+  N     R AG GQ+QG
Sbjct: 209 QAAARPEKKKFDKNRNDRNNRNDNRRPNQNGNGQGHSQGGNHYDKNRPAGQGQNQG 264

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>TER_EUGGR (Q5EU90) Trans-2-enoyl-CoA reductase, mitochondrial precursor (EC|
           1.3.1.44)
          Length = 539

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = -3

Query: 370 WRRAGHQWWRPLVLAQTSSPAARVWGSGSSV--PIAA 266
           W  AG QW  PLV A +S+ A   W +  SV  P+AA
Sbjct: 84  WAAAGPQWAAPLVAAASSALALWWWAARRSVRRPLAA 120

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>IF2_LACLA (P58002) Translation initiation factor IF-2|
          Length = 944

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = +2

Query: 179 QTQIRPNQTKPNQIRSIHPNRSIRKPPPAGRDGDGGSRAPNPSRRGAGLGQDQG 340
           Q   RP + K ++ R+   NRS  + P    +G GG+       R +G GQ+QG
Sbjct: 208 QAAARPEKKKFDKNRNDRNNRSDNRRPNQNGNGQGGNH--YDKNRSSGQGQNQG 259

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>HEX_ADE07 (P36851) Hexon protein (Late protein 2)|
          Length = 937

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 21/60 (35%), Positives = 27/60 (45%)
 Frame = +3

Query: 207 NQTKSDPSIQIDPSASHHPPAAMGTEDPEPQTLAAGELVWAKTKGRHHWWPARLHSPSTQ 386
           N TK    I  D +A + P  A  T  PEPQ    GE  W  T G +  +  R   P+T+
Sbjct: 161 NITKEGLEIGKDITADNKPIYADKTYQPEPQ---VGEESWTDTDGTNEKFGGRALKPATK 217

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>CORO_YEAST (Q06440) Coronin-like protein|
          Length = 651

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +3

Query: 195 PTKPNQTKSDPSIQIDPSASHHP-PAAMGTEDPEPQTLAAGELVWAKTK 338
           P  P +TK D + +++PS    P P ++ T+  + Q+L   E    KTK
Sbjct: 518 PVTPTETKKDRTPKVEPSKELKPEPVSIATDRKQEQSLPQEEKSSEKTK 566

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>NSD1_MOUSE (O88491) Histone-lysine N-methyltransferase, H3 lysine-36 and H4|
            lysine-20 specific (EC 2.1.1.43) (H3-K36-HMTase)
            (H4-K20-HMTase) (Nuclear receptor binding SET domain
            containing protein 1) (NR-binding SET domain containing
            protein)
          Length = 2588

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 315  ELVWAKTKGRHHWWPARLHSP 377
            E+VW K  GR+ WWPA +  P
Sbjct: 1656 EIVWVKV-GRYRWWPAEICHP 1675

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>ARI1B_HUMAN (Q8NFD5) AT-rich interactive domain-containing protein 1B (ARID|
           domain-containing protein 1B) (Osa homolog 2) (hOsa2)
           (p250R) (BRG1-binding protein hELD/OSA1)
           (BRG1-associated factor 250b) (BAF250B)
          Length = 2236

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 25/90 (27%), Positives = 34/90 (37%), Gaps = 6/90 (6%)
 Frame = +3

Query: 141 LIFPRPALISF------HSKPKSDPTKPNQTKSDPSIQIDPSASHHPPAAMGTEDPEPQT 302
           L  P P + S+      +S P + P  P+Q +S  +     +      A MG        
Sbjct: 423 LTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQ 482

Query: 303 LAAGELVWAKTKGRHHWWPARLHSPSTQSP 392
            AA    WA  + R H  PA   SP T  P
Sbjct: 483 YAAASPAWAAAQQRSH--PAM--SPGTPGP 508

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>TB182_MOUSE (P58871) 182 kDa tankyrase 1-binding protein (Fragment)|
          Length = 909

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +3

Query: 225 PSIQIDPSASHHPPAAMGTEDP-EPQTLAAGELVWAKTKGRHHWWPARLHSPSTQSP 392
           P +++DP +S      + TEDP E + L  GE+   +T+G          SPS ++P
Sbjct: 551 PDLELDPKSSGSLSPGLETEDPLEARELGVGEISGPETQGEDS------SSPSFETP 601

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>NADK2_ORYSA (Q53NI2) Probable NAD kinase 2, chloroplast precursor (EC 2.7.1.23)|
          Length = 981

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 20/72 (27%), Positives = 27/72 (37%)
 Frame = -3

Query: 400 ETRGDWVEGEWRRAGHQWWRPLVLAQTSSPAARVWGSGSSVPIAAGGWWLADGSIWMDGS 221
           E    WV G W      WWRP    +    AAR     S + + +  +         D S
Sbjct: 23  ERAAAWVVGRW------WWRPAAAGRRGVVAARASFFSSRIGLDSQNYHT------RDLS 70

Query: 220 DLVWFGLVGSDL 185
            L+W G V  D+
Sbjct: 71  QLLWVGPVPGDI 82

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>1B48_HUMAN (P30486) HLA class I histocompatibility antigen, B-48 alpha chain|
           precursor (MHC class I antigen B*48) (Bw-48)
          Length = 362

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = -3

Query: 433 RWSSEYSAPREETRGDWVEGEWRRAGHQWW-RPLVLAQTSSPAAR 302
           R+ S+ ++PREE R  W+E E    G ++W R   +++T++   R
Sbjct: 59  RFDSDAASPREEPRAPWIEQE----GPEYWDRETQISKTNTQTYR 99

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>YQM4_SCHPO (Q9UU83) Protein P1E11.04c in chromosome III|
          Length = 425

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
 Frame = +3

Query: 186 KSDPTKPNQTKSDPSIQIDPSASHHPPAAMGTEDPEPQ--TLAAGELVWAKTKGRHHWWP 359
           K +P+  +   + P  +   + +    ++MGT DP P+   +A        +  RH    
Sbjct: 62  KKEPSPASSASASPVKKSAEALAERSNSSMGTFDPPPRYSKIARARSTHVASSSRHRSPS 121

Query: 360 ARLHSPSTQSPLVS 401
               SPSTQS L S
Sbjct: 122 HNDSSPSTQSSLKS 135

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>TONB_PSEAE (Q51368) Protein tonB|
          Length = 342

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = +3

Query: 135 LPLIFPRPALISFHSKPKSDPTKPNQTKSDPSIQIDPSASHHPPA-AMGTEDPEPQTLAA 311
           +P   P+P       KPK +P    +  S PS    PS++  PPA  +G   P  QT  +
Sbjct: 186 IPKAKPKP-----EPKPKPEPEPSTEASSQPS----PSSAAPPPAPTVGQSTPGAQTAPS 236

Query: 312 G 314
           G
Sbjct: 237 G 237

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>MINT_HUMAN (Q96T58) Msx2-interacting protein (SPEN homolog)|
            (SMART/HDAC1-associated repressor protein)
          Length = 3664

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +3

Query: 183  PKSDPTKPNQTKSDPSIQIDPSASHHPPAAMGTEDPEP 296
            P   PT+ N   S PSI  D + SH   A +    P P
Sbjct: 2991 PSKLPTEVNHVPSGPSIPADRTVSHLAAAKLDAHSPRP 3028

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>GAG_FSVST (P03338) Gag polyprotein [Contains: Core protein p15; Core protein|
           p12; Core protein p30]
          Length = 371

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
 Frame = +3

Query: 183 PKSDPTKPNQTKSDPSIQIDPSASHHPPAAMGTEDPE---PQTLAAGELV 323
           PK DP KP     DPS  +    +  PP   G   P    P+T AA  +V
Sbjct: 205 PKPDPPKPPVLPPDPSSPLIDLLTEEPPPYPGGHGPPPSGPRTPAASPIV 254

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>HNRPK_RAT (P61980) Heterogeneous nuclear ribonucleoprotein K (dC|
           stretch-binding protein) (CSBP)
          Length = 463

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 16/30 (53%), Positives = 16/30 (53%), Gaps = 6/30 (20%)
 Frame = +2

Query: 254 PPPAGRDGDGGSRA------PNPSRRGAGL 325
           PPP GR G GGSRA      P P  RG  L
Sbjct: 291 PPPPGRGGRGGSRARNLPLPPPPPPRGGDL 320

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>HNRPK_RABIT (O19049) Heterogeneous nuclear ribonucleoprotein K (hnRNP K)|
          Length = 463

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 16/30 (53%), Positives = 16/30 (53%), Gaps = 6/30 (20%)
 Frame = +2

Query: 254 PPPAGRDGDGGSRA------PNPSRRGAGL 325
           PPP GR G GGSRA      P P  RG  L
Sbjct: 291 PPPPGRGGRGGSRARNLPLPPPPPPRGGDL 320

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>HNRPK_MOUSE (P61979) Heterogeneous nuclear ribonucleoprotein K|
          Length = 463

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 16/30 (53%), Positives = 16/30 (53%), Gaps = 6/30 (20%)
 Frame = +2

Query: 254 PPPAGRDGDGGSRA------PNPSRRGAGL 325
           PPP GR G GGSRA      P P  RG  L
Sbjct: 291 PPPPGRGGRGGSRARNLPLPPPPPPRGGDL 320

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>HNRPK_HUMAN (P61978) Heterogeneous nuclear ribonucleoprotein K (hnRNP K)|
           (Transformation up-regulated nuclear protein) (TUNP)
          Length = 463

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 16/30 (53%), Positives = 16/30 (53%), Gaps = 6/30 (20%)
 Frame = +2

Query: 254 PPPAGRDGDGGSRA------PNPSRRGAGL 325
           PPP GR G GGSRA      P P  RG  L
Sbjct: 291 PPPPGRGGRGGSRARNLPLPPPPPPRGGDL 320

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>UHRF2_MOUSE (Q7TMI3) Ubiquitin-like PHD and RING finger domain-containing|
           protein 2 (EC 6.3.2.-) (Ubiquitin-like-containing PHD
           and RING finger domains protein 2) (Np95-like ring
           finger protein) (Nuclear zinc finger protein Np97)
           (NIRF)
          Length = 803

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 17/85 (20%)
 Frame = +3

Query: 186 KSDPTKPNQTKSDPSIQIDPSASHHPP----AAMGTEDPEPQTLA-------------AG 314
           + D + P+ +K + + Q+ PS SH+PP     A G    +P T A               
Sbjct: 74  RPDSSLPSTSKQNDA-QVKPS-SHNPPKVKKTARGGSSSQPSTSARTCLIDPGFGLYKVN 131

Query: 315 ELVWAKTKGRHHWWPARLHSPSTQS 389
           ELV A+  G   W+ A +HS +  S
Sbjct: 132 ELVDARDVGLGAWFEAHIHSVTRAS 156

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>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2|
          Length = 1033

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 17/40 (42%), Positives = 19/40 (47%)
 Frame = -1

Query: 339 PWSWPRPAPRRLGFGARDPPSPSRPAGGGLRMDRFGWMDR 220
           P + PRP P   G G R P    RP GGG R    G+  R
Sbjct: 310 PAAGPRPGP---GGGGRGPGGAGRPGGGGGRPGGGGFAGR 346

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>IF2_GLUOX (Q5FQM3) Translation initiation factor IF-2|
          Length = 917

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 17/31 (54%), Positives = 18/31 (58%), Gaps = 5/31 (16%)
 Frame = -1

Query: 324 RPAPRRLGFGA-----RDPPSPSRPAGGGLR 247
           RPAPRR G GA     R P +PSR  GG  R
Sbjct: 256 RPAPRRSGPGAPPAPPRRPSAPSRKGGGSDR 286

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>SGS3_DROSI (P13729) Salivary glue protein Sgs-3 precursor|
          Length = 217

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
 Frame = +3

Query: 174 HSKPKSDPTKPNQTKSDPSIQIDPS---ASHHPPAAMGTEDPEP 296
           HS PK+ PTK    K+ P+    P      H  P    T  P+P
Sbjct: 125 HSTPKTKPTKHTTPKTKPTKHTTPKTKPTKHTTPTTTTTTTPKP 168

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>TACC1_MOUSE (Q6Y685) Transforming acidic coiled-coil-containing protein 1|
          Length = 774

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 19/68 (27%), Positives = 28/68 (41%)
 Frame = +3

Query: 189 SDPTKPNQTKSDPSIQIDPSASHHPPAAMGTEDPEPQTLAAGELVWAKTKGRHHWWPARL 368
           SDPT  +      S ++DPS   HPPA      P  Q           +K  HH+ P  +
Sbjct: 363 SDPTVQDALLDQMSPKLDPSKRSHPPANFFGSGPILQNSPP-----LSSKCSHHFDPNNI 417

Query: 369 HSPSTQSP 392
           ++  +  P
Sbjct: 418 NTDDSGDP 425

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>NCOA6_MOUSE (Q9JL19) Nuclear receptor coactivator 6 (Amplified in breast cancer|
            protein 3) (Cancer-amplified transcriptional coactivator
            ASC-2) (Activating signal cointegrator 2) (ASC-2)
            (Peroxisome proliferator-activated receptor-interacting
            protein) (P
          Length = 2067

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = +3

Query: 132  GLPLIFPRPALISFHSKPKSDPTKPNQTKSDPSIQIDPSASHH--PPAAMGTEDPEPQ 299
            G+ L    P L  F ++P   PT+P + +  P  Q+ P    H  PP     + P+PQ
Sbjct: 957  GINLDTTGPKLPDFSNRPPGYPTQPVEQR--PLPQMPPQLMQHVAPPPQPPQQQPQPQ 1012

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>EGR2B_BRARE (Q05159) Early growth response protein 2b (EGR-2b) (Krox-20|
           protein) (KRX-20 protein)
          Length = 412

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
 Frame = -3

Query: 277 PIAAGGWW--LADGSIWMD--GSDLVWFGLVGSDLGLEWKEINAGRGKING 137
           P++ GG+   LAD    +D  G+ L     + +DLG  +++INAG G ING
Sbjct: 10  PVSLGGFVHPLADSIYSVDELGTTLPASVTIYNDLGGHYEQINAGDGLING 60

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>DNM3B_HUMAN (Q9UBC3) DNA (cytosine-5)-methyltransferase 3B (EC 2.1.1.37)|
           (Dnmt3b) (DNA methyltransferase HsaIIIB) (DNA MTase
           HsaIIIB) (M.HsaIIIB)
          Length = 853

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 279 TEDPEPQTLAAGELVWAKTKGRHHWWPARLHS 374
           +E  + +    G+LVW K KG   WWPA + S
Sbjct: 215 SEYQDGKEFGIGDLVWGKIKG-FSWWPAMVVS 245

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>IF2_NEIMB (Q9JYD2) Translation initiation factor IF-2|
          Length = 962

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 25/99 (25%), Positives = 37/99 (37%)
 Frame = +3

Query: 153 RPALISFHSKPKSDPTKPNQTKSDPSIQIDPSASHHPPAAMGTEDPEPQTLAAGELVWAK 332
           +P      + P +  TKP +       Q D   S  P         EP+  AA       
Sbjct: 157 KPTEAKAETAPVAAETKPAEESKAEKAQADKMPSEKPA--------EPKEKAAKPKHERN 208

Query: 333 TKGRHHWWPARLHSPSTQSPLVSSLGAEYSDDHRPAAAA 449
            KG+    PA+  +P+   P+VS+      D+    AAA
Sbjct: 209 GKGKDAKKPAKPAAPAVPQPVVSAEEQAQRDEEARRAAA 247

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>PMA1_YEAST (P05030) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)|
          Length = 918

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 237 FGWMDRIWFGLVWLGRIWVWN 175
           FGW    W  +V + R+W+W+
Sbjct: 842 FGWWSENWTDIVTVVRVWIWS 862

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>1B82_HUMAN (Q29718) HLA class I histocompatibility antigen, B-82 alpha chain|
           precursor (MHC class I antigen B*82)
          Length = 362

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 433 RWSSEYSAPREETRGDWVEGEWRRAGHQWW 344
           R+ S+ ++PREE R  W+E E    G ++W
Sbjct: 59  RFDSDAASPREEPRAPWIEQE----GPEYW 84

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>1B81_HUMAN (Q31610) HLA class I histocompatibility antigen, B-81 alpha chain|
           precursor (MHC class I antigen B*81) (B'DT)
          Length = 362

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 433 RWSSEYSAPREETRGDWVEGEWRRAGHQWW 344
           R+ S+ ++PREE R  W+E E    G ++W
Sbjct: 59  RFDSDAASPREEPRAPWIEQE----GPEYW 84

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>1B67_HUMAN (Q29836) HLA class I histocompatibility antigen, B-67 alpha chain|
           precursor (MHC class I antigen B*67)
          Length = 362

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 433 RWSSEYSAPREETRGDWVEGEWRRAGHQWW 344
           R+ S+ ++PREE R  W+E E    G ++W
Sbjct: 59  RFDSDAASPREEPRAPWIEQE----GPEYW 84

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>1B59_HUMAN (Q29940) HLA class I histocompatibility antigen, B-59 alpha chain|
           precursor (MHC class I antigen B*59)
          Length = 362

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 433 RWSSEYSAPREETRGDWVEGEWRRAGHQWW 344
           R+ S+ ++PREE R  W+E E    G ++W
Sbjct: 59  RFDSDAASPREEPRAPWIEQE----GPEYW 84

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>1B56_HUMAN (P30495) HLA class I histocompatibility antigen, B-56 alpha chain|
           precursor (MHC class I antigen B*56) (Bw-56) (Bw-22)
          Length = 362

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 433 RWSSEYSAPREETRGDWVEGEWRRAGHQWW 344
           R+ S+ ++PREE R  W+E E    G ++W
Sbjct: 59  RFDSDAASPREEPRAPWIEQE----GPEYW 84

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>1B55_HUMAN (P30493) HLA class I histocompatibility antigen, B-55 alpha chain|
           precursor (MHC class I antigen B*55) (Bw-55) (B-12)
          Length = 362

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 433 RWSSEYSAPREETRGDWVEGEWRRAGHQWW 344
           R+ S+ ++PREE R  W+E E    G ++W
Sbjct: 59  RFDSDAASPREEPRAPWIEQE----GPEYW 84

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>1B42_HUMAN (P30480) HLA class I histocompatibility antigen, B-42 alpha chain|
           precursor (MHC class I antigen B*42)
          Length = 362

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 433 RWSSEYSAPREETRGDWVEGEWRRAGHQWW 344
           R+ S+ ++PREE R  W+E E    G ++W
Sbjct: 59  RFDSDAASPREEPRAPWIEQE----GPEYW 84

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>1B39_HUMAN (P30475) HLA class I histocompatibility antigen, B-39 alpha chain|
           precursor (MHC class I antigen B*39)
          Length = 362

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 433 RWSSEYSAPREETRGDWVEGEWRRAGHQWW 344
           R+ S+ ++PREE R  W+E E    G ++W
Sbjct: 59  RFDSDAASPREEPRAPWIEQE----GPEYW 84

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>1B38_HUMAN (Q95365) HLA class I histocompatibility antigen, B-38 alpha chain|
           precursor (MHC class I antigen B*38) (Bw-4)
          Length = 362

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 433 RWSSEYSAPREETRGDWVEGEWRRAGHQWW 344
           R+ S+ ++PREE R  W+E E    G ++W
Sbjct: 59  RFDSDAASPREEPRAPWIEQE----GPEYW 84

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>1B27_HUMAN (P03989) HLA class I histocompatibility antigen, B-27 alpha chain|
           precursor (MHC class I antigen B*27)
          Length = 362

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 433 RWSSEYSAPREETRGDWVEGEWRRAGHQWW 344
           R+ S+ ++PREE R  W+E E    G ++W
Sbjct: 59  RFDSDAASPREEPRAPWIEQE----GPEYW 84

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>1B14_HUMAN (P30462) HLA class I histocompatibility antigen, B-14 alpha chain|
           precursor (MHC class I antigen B*14)
          Length = 362

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 433 RWSSEYSAPREETRGDWVEGEWRRAGHQWW 344
           R+ S+ ++PREE R  W+E E    G ++W
Sbjct: 59  RFDSDAASPREEPRAPWIEQE----GPEYW 84

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>1B08_HUMAN (P30460) HLA class I histocompatibility antigen, B-8 alpha chain|
           precursor (MHC class I antigen B*8)
          Length = 362

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 433 RWSSEYSAPREETRGDWVEGEWRRAGHQWW 344
           R+ S+ ++PREE R  W+E E    G ++W
Sbjct: 59  RFDSDAASPREEPRAPWIEQE----GPEYW 84

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>1B07_HUMAN (P01889) HLA class I histocompatibility antigen, B-7 alpha chain|
           precursor (MHC class I antigen B*7)
          Length = 362

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 433 RWSSEYSAPREETRGDWVEGEWRRAGHQWW 344
           R+ S+ ++PREE R  W+E E    G ++W
Sbjct: 59  RFDSDAASPREEPRAPWIEQE----GPEYW 84

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>GAG_FSVHZ (P04322) Gag polyprotein [Contains: Core protein p15; Core protein|
           p12; Core protein p30] (Fragment)
          Length = 414

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +3

Query: 183 PKSDPTKPNQTKSDPSIQIDPSASHHPPAAMGTEDPEP 296
           PK+DP KP     DPS  +    +  PP   G   P P
Sbjct: 205 PKTDPPKPPVLPPDPSSPLIDLLTEEPPPYPGGHGPLP 242

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>CAC1G_RAT (O54898) Voltage-dependent T-type calcium channel alpha-1G subunit|
            (Voltage-gated calcium channel alpha subunit Cav3.1)
          Length = 2254

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
 Frame = +3

Query: 114  SNLQSFGLPLIFPRPALISFHSKPKSDP-TKPNQTKSDPSIQIDP--SASHHPPAAMG 278
            S L S   P + P P+  S   +P   P ++P +  S PSI IDP  S    PP + G
Sbjct: 2150 SCLDSGSQPRLCPSPS--SLGGQPLGGPGSRPKKKLSPPSISIDPPESQGSRPPCSPG 2205

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>1B73_HUMAN (Q31612) HLA class I histocompatibility antigen, B-73 alpha chain|
           precursor (MHC class I antigen B*73)
          Length = 363

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3

Query: 433 RWSSEYSAPREETRGDWVEGEWRRAGHQWW 344
           R+ S+ ++PREE R  W+E E    G ++W
Sbjct: 59  RFDSDAASPREEPRAPWIEQE----GPEYW 84

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>GA2L3_HUMAN (Q86XJ1) GAS2-like protein 3 (Growth arrest-specific 2-like 3)|
          Length = 694

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +2

Query: 179 QTQIRPNQTKPNQIRSIHPNRSIRKPPPAGRDGDGGSRAPNPSRR 313
           QT  +   +     RS     SIRKPP + +D D G + P   ++
Sbjct: 633 QTVAKSQHSTKGPPRSGKTPASIRKPPSSVKDADSGDKKPTAKKK 677

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>CENPA_HUMAN (P49450) Centromere protein A (CENP-A) (Centromere autoantigen A)|
          Length = 140

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = +2

Query: 233 PNRSIRKPPPAGRDGDGGSRAPNPSRRGAGLG 328
           P R  RKP    R     +  P PSRRG  LG
Sbjct: 3   PRRRSRKPEAPRRRSPSPTPTPGPSRRGPSLG 34

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>SFSB_SHIFL (P0ACH4) Sugar fermentation stimulation protein B (Ner-like|
           protein)
          Length = 92

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = +3

Query: 312 GELVWAKTKGRHHW--WPARLHSPST 383
           GE++ AK  G   W  WP+R H P T
Sbjct: 49  GEMIIAKALGTDPWVIWPSRYHDPQT 74

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>SFSB_ECOLI (P0ACH1) Sugar fermentation stimulation protein B (Ner-like|
           protein)
          Length = 92

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = +3

Query: 312 GELVWAKTKGRHHW--WPARLHSPST 383
           GE++ AK  G   W  WP+R H P T
Sbjct: 49  GEMIIAKALGTDPWVIWPSRYHDPQT 74

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>SFSB_ECOL6 (P0ACH2) Sugar fermentation stimulation protein B (Ner-like|
           protein)
          Length = 92

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = +3

Query: 312 GELVWAKTKGRHHW--WPARLHSPST 383
           GE++ AK  G   W  WP+R H P T
Sbjct: 49  GEMIIAKALGTDPWVIWPSRYHDPQT 74

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>SFSB_ECO57 (P0ACH3) Sugar fermentation stimulation protein B (Ner-like|
           protein)
          Length = 92

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = +3

Query: 312 GELVWAKTKGRHHW--WPARLHSPST 383
           GE++ AK  G   W  WP+R H P T
Sbjct: 49  GEMIIAKALGTDPWVIWPSRYHDPQT 74

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>MSH6_MOUSE (P54276) DNA mismatch repair protein MSH6 (MutS-alpha 160 kDa|
           subunit) (G/T mismatch-binding protein) (GTBP) (GTMBP)
           (p160)
          Length = 1358

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 288 PEPQTLAAGELVWAKTKGRHHWWPARLHS 374
           P     + G+LVWAK +G + WWP  +++
Sbjct: 85  PSSCDFSPGDLVWAKMEG-YPWWPCLVYN 112

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>CAKI_DROME (Q24210) Calcium/calmodulin-dependent protein kinase (EC 2.7.11.17)|
           (CAKI) (Peripheral plasma membrane protein CaMGUK)
          Length = 898

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 312 GELVWAKTKGRHHWWPARLHSPSTQSPLVSS 404
           G+++   +K  HHWW ARL +    + L+ S
Sbjct: 613 GDILQIISKDDHHWWQARLDTVGGSAGLIPS 643

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>VGLL2_HUMAN (Q8N8G2) Transcription cofactor vestigial-like protein 2 (Vgl-2)|
           (VITO1 protein)
          Length = 317

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 21/67 (31%), Positives = 26/67 (38%)
 Frame = +3

Query: 243 PSASHHPPAAMGTEDPEPQTLAAGELVWAKTKGRHHWWPARLHSPSTQSPLVSSLGAEYS 422
           P A+ H        DP       G L    T+  HH  P   H P     L  +LGA+ +
Sbjct: 161 PLATAHSELPFAAADPYSPAALHGHLHQGATEPWHHAHPHHAH-PHHPYALGGALGAQAA 219

Query: 423 DDHRPAA 443
              RPAA
Sbjct: 220 PYPRPAA 226

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>GAG_FLV (P10262) Gag polyprotein [Contains: Core protein p15; Core protein|
           p12; Core protein p30; Core protein p10]
          Length = 580

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = +3

Query: 183 PKSDPTKPNQTKSDPSIQIDPSASHHPPAAMGTEDPEP 296
           PK DP KP     DPS  +    +  PP   G   P P
Sbjct: 205 PKPDPPKPPVLPPDPSSPLIDLLTEEPPPYPGGHGPPP 242

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>IF2_NEIMA (Q9JTB5) Translation initiation factor IF-2|
          Length = 962

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 25/99 (25%), Positives = 37/99 (37%)
 Frame = +3

Query: 153 RPALISFHSKPKSDPTKPNQTKSDPSIQIDPSASHHPPAAMGTEDPEPQTLAAGELVWAK 332
           +P      + P +  TKP +       Q D   S  P         EP+  AA       
Sbjct: 157 KPTEAKAETAPVAAETKPAEESKAEKAQADKMPSKKPA--------EPKEKAAKPKHERN 208

Query: 333 TKGRHHWWPARLHSPSTQSPLVSSLGAEYSDDHRPAAAA 449
            KG+    PA+  +P+   P+VS+      D+    AAA
Sbjct: 209 GKGKDAKKPAKPAAPAVPQPVVSAEEQAQRDEEARRAAA 247

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>GSCR2_HUMAN (Q9NZM5) Glioma tumor suppressor candidate region gene 2 protein|
           (p60)
          Length = 478

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 17/100 (17%)
 Frame = +3

Query: 204 PNQTKSDPSIQIDPSASHHPPAAMGT-----------EDPEPQTLAA-GELVWAKTKGRH 347
           P + +   +  ++PSA+   P    T           ++P  + L    E    +TK + 
Sbjct: 162 PREVRRAQARLLNPSATRAKPGPQDTVERPFYDLWASDNPLDRPLVGQDEFFLEQTKKKG 221

Query: 348 HWWPARLHSPSTQSPL--VSSLGAEYS---DDHRPAAAAA 452
              PARLH+  +Q+P   V+  GA Y+   +DH+   +AA
Sbjct: 222 VKRPARLHTKPSQAPAVEVAPAGASYNPSFEDHQTLLSAA 261

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>SC24A_MOUSE (Q3U2P1) Protein transport protein Sec24A (SEC24-related protein A)|
          Length = 1090

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 20/58 (34%), Positives = 24/58 (41%)
 Frame = +3

Query: 123 QSFGLPLIFPRPALISFHSKPKSDPTKPNQTKSDPSIQIDPSASHHPPAAMGTEDPEP 296
           Q+   PL+   P L S HS P   P  P  T  +P+    PS S  P    G   P P
Sbjct: 84  QTLNSPLVTSGPVLPSLHSGPV--PRMPLPTSQNPAATPMPSGSFLP----GANPPPP 135

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>GAG_FSVMD (P03340) Gag polyprotein [Contains: Core protein p15; Core protein|
           p12; Core protein p30; Core protein p10]
          Length = 536

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +3

Query: 183 PKSDPTKPNQTKSDPSIQIDPSASHHPPAAMGTEDPEPQTL 305
           PK++P KP     DPS  +    +  PP   G   P P  L
Sbjct: 208 PKTNPPKPPVLPPDPSSPLIDLLTEEPPPYPGGHGPPPSGL 248

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>MIS_HUMAN (P03971) Muellerian-inhibiting factor precursor (MIS)|
           (Anti-Muellerian hormone) (AMH) (Mullerian-inhibiting
           substance)
          Length = 560

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 32/121 (26%), Positives = 49/121 (40%), Gaps = 17/121 (14%)
 Frame = +3

Query: 135 LPLIFPRPALISFHSKPKSDPTKPNQTK------------SDPSIQIDPSA-SHHPPAAM 275
           +P   PRP+     S P +DP     T+            S P + +DP A +  P   +
Sbjct: 269 VPFPPPRPSAELEESPPSADPFLETLTRLVRALRVPPARASAPRLALDPDALAGFPQGLV 328

Query: 276 GTEDPEP-QTLAAGE---LVWAKTKGRHHWWPARLHSPSTQSPLVSSLGAEYSDDHRPAA 443
              DP   + L  GE   L+  +        PA LH P T +P  ++L    + + + AA
Sbjct: 329 NLSDPAALERLLDGEEPLLLLLRPTAATTGDPAPLHDP-TSAPWATALARRVAAELQAAA 387

Query: 444 A 446
           A
Sbjct: 388 A 388

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>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 21/81 (25%), Positives = 28/81 (34%)
 Frame = +3

Query: 150 PRPALISFHSKPKSDPTKPNQTKSDPSIQIDPSASHHPPAAMGTEDPEPQTLAAGELVWA 329
           P P     H  P +    P      PS Q+ P  ++ PP     + P P   + G     
Sbjct: 169 PSPPSRHGHPPPPTYAQPPPTPIYSPSPQVQPPPTYSPPPPTHVQ-PTPSPPSRGHQPQP 227

Query: 330 KTKGRHHWWPARLHSPSTQSP 392
            T    H  P   H+P T  P
Sbjct: 228 PT--HRHAPPTHRHAPPTHQP 246

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>1C02_HUMAN (P30501) HLA class I histocompatibility antigen, Cw-2 alpha chain|
           precursor (MHC class I antigen Cw*2)
          Length = 366

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -3

Query: 433 RWSSEYSAPREETRGDWVEGEWRRAGHQWW 344
           R+ S+ ++PR E RG WVE E    G ++W
Sbjct: 59  RFDSDAASPRGEPRGRWVEQE----GPEYW 84

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>PMA2_YEAST (P19657) Plasma membrane ATPase 2 (EC 3.6.3.6) (Proton pump 2)|
          Length = 947

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 237 FGWMDRIWFGLVWLGRIWVWN 175
           FGW    W  +V + R+W+W+
Sbjct: 871 FGWWSENWTDIVSVVRVWIWS 891

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>DAAM1_MOUSE (Q8BPM0) Disheveled-associated activator of morphogenesis 1|
          Length = 1071

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -1

Query: 327 PRPAPRRLGFGARDPPSPSRPAGG 256
           P P P  L  GA  PP P  PAGG
Sbjct: 550 PPPPPPLLSGGALPPPPPPLPAGG 573

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>COIA1_MOUSE (P39061) Collagen alpha-1(XVIII) chain precursor [Contains:|
           Endostatin]
          Length = 1774

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1

Query: 303 GFGARDPPSPSRPAGGGLRMDRFGWMD 223
           G G R PP P  P G   R D+  ++D
Sbjct: 880 GIGPRGPPGPPGPPGPSFRQDKLTFID 906

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>MSH6_HUMAN (P52701) DNA mismatch repair protein MSH6 (MutS-alpha 160 kDa|
           subunit) (G/T mismatch binding protein) (GTBP) (GTMBP)
           (p160)
          Length = 1360

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 288 PEPQTLAAGELVWAKTKGRHHWWPARLHS 374
           P     + G+LVWAK +G + WWP  +++
Sbjct: 85  PTSCDFSPGDLVWAKMEG-YPWWPCLVYN 112


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.126    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,038,242
Number of Sequences: 219361
Number of extensions: 1172319
Number of successful extensions: 6458
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 5544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6414
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result