ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl26b10 |
|---|---|
| Clone Library Name | barley_pub |
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 172 bits (435), Expect = 4e-43 Identities = 84/116 (72%), Positives = 99/116 (85%) Frame = +2 Query: 74 VGGIVSDLTGGLRGARLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 253 +GGI+ +TG + +RLKG+VVLMRKN LD NDFGATV+DG+ E LG+GVTCQLISST V Sbjct: 2 LGGIIDTITGSSKQSRLKGTVVLMRKNVLDLNDFGATVIDGLGEFLGKGVTCQLISSTAV 61 Query: 254 DHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKN 421 D NNG RGKVGAEA+LEQW L ++LP +TTGE++F VTFDW VDKLGVPGAIIVKN Sbjct: 62 DPNNGNRGKVGAEASLEQW-LTSSLPSLTTGESRFGVTFDWDVDKLGVPGAIIVKN 116
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 171 bits (433), Expect = 7e-43 Identities = 81/116 (69%), Positives = 98/116 (84%) Frame = +2 Query: 74 VGGIVSDLTGGLRGARLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 253 +GG++ LTG + ARLKG+VVLMRKN LD NDFGAT++DG+ E LG+GVTCQLISST V Sbjct: 3 LGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAV 62 Query: 254 DHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKN 421 D +NGGRGKVGAEA LEQW+ T+LP +TTGE+KF +TFDW V+KLGVPGAI+V N Sbjct: 63 DQDNGGRGKVGAEAELEQWV--TSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVNN 116
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 169 bits (427), Expect = 4e-42 Identities = 82/116 (70%), Positives = 100/116 (86%) Frame = +2 Query: 74 VGGIVSDLTGGLRGARLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 253 +GGI+ LTG + ARLKGS+VLMRKNALD NDFGATV+DG++E LGRGVTCQL+SS+ V Sbjct: 2 LGGIIGGLTGN-KNARLKGSLVLMRKNALDINDFGATVIDGISEFLGRGVTCQLVSSSLV 60 Query: 254 DHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKN 421 D NNG RG+VG EA+LEQWL T+LP +TTGE+KF VTF+W V+K+G+PGAIIVKN Sbjct: 61 DPNNGNRGRVGTEASLEQWL--TSLPSLTTGESKFGVTFEWEVEKMGIPGAIIVKN 114
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 118 bits (296), Expect = 6e-27 Identities = 61/116 (52%), Positives = 81/116 (69%) Frame = +2 Query: 74 VGGIVSDLTGGLRGARLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 253 +GG+ LTG G ++KG VLM + LD DF A+++D V E+ G +TCQL+S+T Sbjct: 2 LGGLKDKLTGK-NGNKIKGLAVLMSRKLLDPRDFTASLLDNVHEVFGNSITCQLVSATVA 60 Query: 254 DHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKN 421 D NN GRG VG+EANLEQ L T+LP ++ GE+K V F+W +DK GVPGAII+KN Sbjct: 61 DQNNEGRGIVGSEANLEQGL--TDLPSVSQGESKLTVRFNWEMDKHGVPGAIIIKN 114
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 105 bits (263), Expect = 4e-23 Identities = 59/117 (50%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Frame = +2 Query: 74 VGGIVSDLTGGLRGARLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLIS-STN 250 +GGIV + G ++KG V+LM+KN LDF + GA+V+DG+++LLG+ V+ QLIS S N Sbjct: 3 LGGIVDAILGKDDRPKVKGRVILMKKNVLDFINIGASVVDGISDLLGQKVSIQLISGSVN 62 Query: 251 VDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKN 421 D G GK+ A LE WL T++ IT GE+ F+VTFDW D+ GVPGA I+KN Sbjct: 63 YD---GLEGKLSNPAYLESWL--TDITPITAGESTFSVTFDWDRDEFGVPGAFIIKN 114
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 101 bits (251), Expect = 9e-22 Identities = 52/113 (46%), Positives = 74/113 (65%), Gaps = 3/113 (2%) Frame = +2 Query: 95 LTGG---LRGARLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHNN 265 LTGG ++KG+VVLM+KN LDFNDF A+ +D + E LG +T +L+SS D N Sbjct: 9 LTGGGNETTTKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLGNKITLRLVSSDVTDSEN 68 Query: 266 GGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNT 424 G +GK+G A+LE W+ T + +T GE+ F VTFD+ D G PGA +++N+ Sbjct: 69 GSKGKLGKAAHLEDWI--TTITSLTAGESAFKVTFDYETD-FGYPGAFLIRNS 118
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 92.4 bits (228), Expect = 4e-19 Identities = 53/117 (45%), Positives = 74/117 (63%), Gaps = 1/117 (0%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAR-LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTN 250 +G +V L GG ++ +KG+VV+M+KNALDF D ++ D + E LG+ V+ QLISS Sbjct: 2 LGQLVGGLIGGHHDSKKVKGTVVMMKKNALDFTDLAGSLTDKIFEALGQKVSFQLISSVQ 61 Query: 251 VDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKN 421 D NG +GK A LE +LL L + GE F VTFDW+ ++ GVPGA ++KN Sbjct: 62 SDPANGLQGKHSNPAYLENFLL--TLTPLAAGETAFGVTFDWN-EEFGVPGAFVIKN 115
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 84.7 bits (208), Expect = 9e-17 Identities = 51/117 (43%), Positives = 69/117 (58%), Gaps = 1/117 (0%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAR-LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTN 250 +G I S L GG ++ +KG+VV+M KN LDF D ++ + ++LG+ V+ QLISS Sbjct: 2 IGQITSGLFGGHDDSKKVKGTVVMMNKNVLDFTDLAGSLTGKIFDVLGQKVSFQLISSVQ 61 Query: 251 VDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKN 421 D NG +GK A LE L T P E F VTFDW+ ++ GVPGA I+KN Sbjct: 62 GDPTNGLQGKHSNPAYLENSLF-TLTPLTAGSETAFGVTFDWN-EEFGVPGAFIIKN 116
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 84.3 bits (207), Expect = 1e-16 Identities = 49/123 (39%), Positives = 75/123 (60%), Gaps = 6/123 (4%) Frame = +2 Query: 74 VGGIVSDLTGGLRGA----RLKGSVVLMRKNALDFNDFGATVMDGVTELLGR--GVTCQL 235 V G LTG + A R++G+ VL++K+ L DF A+++DGV +LG GV +L Sbjct: 3 VQGFFDRLTGRNKEAWKEGRIRGTAVLVKKDVLGLGDFHASLLDGVHNILGHKEGVAFRL 62 Query: 236 ISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIV 415 +S+T D +NGGRGK+G A+LE+ L + GE+ F V F+W + G+PGA++V Sbjct: 63 VSATARDPSNGGRGKLGKPAHLEE--LVVTMKSTAAGESVFRVAFEWD-ESQGIPGAVVV 119 Query: 416 KNT 424 N+ Sbjct: 120 TNS 122
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 81.3 bits (199), Expect = 1e-15 Identities = 53/129 (41%), Positives = 76/129 (58%), Gaps = 19/129 (14%) Frame = +2 Query: 92 DLTGGL-RGARLKGSVVLMRKNALDFN--------------DFGATV----MDGVTELLG 214 ++TG L +G +++G+VVLMRKN LDFN D G + +DG+T LG Sbjct: 4 NVTGLLNKGHKIRGTVVLMRKNVLDFNTIVSIGGGNVHGVIDSGINIIGSTLDGLTAFLG 63 Query: 215 RGVTCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLG 394 R V+ QLIS+T D N G+GKVG + LE L +LP + GE+ F + F+W ++G Sbjct: 64 RSVSLQLISATKSDAN--GKGKVGKDTFLEGVL--ASLPTLGAGESAFNIHFEWD-HEMG 118 Query: 395 VPGAIIVKN 421 +PGA +KN Sbjct: 119 IPGAFYIKN 127
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 79.3 bits (194), Expect = 4e-15 Identities = 52/137 (37%), Positives = 73/137 (53%), Gaps = 18/137 (13%) Frame = +2 Query: 65 MFGVGGIVSDLTGGLRGARLKGSVVLMRKNALDFNDFG------------------ATVM 190 MF V G+ L G G ++KG+VVLMRKN LDFN + + Sbjct: 1 MFSVPGVSGILNRG-GGHKIKGTVVLMRKNVLDFNSVADLTKGNVGGLIGTGLNVVGSTL 59 Query: 191 DGVTELLGRGVTCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTF 370 D +T LGR V QLIS+T N G+GKVG + LE ++ +LP + GE+ F + F Sbjct: 60 DNLTAFLGRSVALQLISATKPLAN--GKGKVGKDTFLEGIIV--SLPTLGAGESAFNIQF 115 Query: 371 DWSVDKLGVPGAIIVKN 421 +W + +G+PGA +KN Sbjct: 116 EWD-ESMGIPGAFYIKN 131
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 78.2 bits (191), Expect = 8e-15 Identities = 50/125 (40%), Positives = 72/125 (57%), Gaps = 14/125 (11%) Frame = +2 Query: 89 SDLTGGL-RGARLKGSVVLMRKNALDFN-------------DFGATVMDGVTELLGRGVT 226 S +TG L RG ++KG+VVLMRKN LD N D + +D +T LGR V+ Sbjct: 3 SGVTGILNRGHKIKGTVVLMRKNVLDINSLTTVGGVIGQGFDILGSTVDNLTAFLGRSVS 62 Query: 227 CQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGA 406 QLIS+T D G+GK+G LE + ++LP + G++ F + F+W D +G+PGA Sbjct: 63 LQLISATKPDAT--GKGKLGKATFLEG--IISSLPTLGAGQSAFKIHFEWD-DDMGIPGA 117 Query: 407 IIVKN 421 +KN Sbjct: 118 FYIKN 122
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 77.8 bits (190), Expect = 1e-14 Identities = 45/103 (43%), Positives = 65/103 (63%) Frame = +2 Query: 113 GARLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHNNGGRGKVGAE 292 G ++KG+VVLM KN L+ N G+ V D + LGR V+ QLIS+T D + G+GKVG + Sbjct: 5 GHKIKGTVVLMPKNELEVNPDGSAV-DNLNAFLGRSVSLQLISATKADAH--GKGKVGKD 61 Query: 293 ANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKN 421 LE + T+LP + GE+ F + F+W +G+PGA +KN Sbjct: 62 TFLEG--INTSLPTLGAGESAFNIHFEWD-GSMGIPGAFYIKN 101
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 74.3 bits (181), Expect = 1e-13 Identities = 49/124 (39%), Positives = 69/124 (55%), Gaps = 15/124 (12%) Frame = +2 Query: 95 LTGGL--RGARLKGSVVLMRKNALDFN-------------DFGATVMDGVTELLGRGVTC 229 + GGL RG ++KG+VVLMRKN L N D + +D +T LGR V+ Sbjct: 1 MLGGLLHRGHKIKGTVVLMRKNVLHVNSVTSVGGIIGQGLDLVGSTLDTLTAFLGRPVSL 60 Query: 230 QLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAI 409 QLIS+T D N G+GK+G LE + T+LP + G++ F + F+W D G+ GA Sbjct: 61 QLISATKADAN--GKGKLGKATFLEG--IITSLPTLGAGQSAFKINFEWD-DGSGILGAF 115 Query: 410 IVKN 421 +KN Sbjct: 116 YIKN 119
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 71.6 bits (174), Expect = 8e-13 Identities = 47/126 (37%), Positives = 65/126 (51%), Gaps = 22/126 (17%) Frame = +2 Query: 110 RGARLKGSVVLMRKNALDFNDFGAT----------------------VMDGVTELLGRGV 223 +G ++KG+VVLM KN LDFN + V+D T LGR + Sbjct: 7 KGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRNI 66 Query: 224 TCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPG 403 + QLIS+T D G GKVG E LE+ LPT LP + ++ F++ F+W G+PG Sbjct: 67 SMQLISATQTD--GSGNGKVGKEVYLEKH-LPT-LPTLGARQDAFSIFFEWDA-SFGIPG 121 Query: 404 AIIVKN 421 A +KN Sbjct: 122 AFYIKN 127
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 68.6 bits (166), Expect = 7e-12 Identities = 44/126 (34%), Positives = 64/126 (50%), Gaps = 22/126 (17%) Frame = +2 Query: 110 RGARLKGSVVLMRKNALDFNDFGAT----------------------VMDGVTELLGRGV 223 RG ++KG+VVLM KN DFN+F +T ++DG T + R + Sbjct: 7 RGHKIKGTVVLMTKNVFDFNEFVSTTRGGIVGAAGGLFGAATDIVGGIVDGATAIFSRNI 66 Query: 224 TCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPG 403 QLIS+T D G GKVG + LE+ L +LP + ++ F V F+W + G+P Sbjct: 67 AIQLISATKTD--GLGNGKVGKQTFLEKHL--PSLPNLGDRQDAFNVYFEWD-ENFGIPE 121 Query: 404 AIIVKN 421 A +KN Sbjct: 122 AFYIKN 127
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 68.2 bits (165), Expect = 9e-12 Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 20/124 (16%) Frame = +2 Query: 110 RGARLKGSVVLMRKNALDFN--------------------DFGATVMDGVTELLGRGVTC 229 RG +LKG+V+LM+KN LD N +++D T LGR V Sbjct: 8 RGQKLKGTVILMQKNVLDINALTAAQSPSGIIGGAFGVVGSIAGSIIDTATAFLGRSVRL 67 Query: 230 QLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAI 409 +LIS+T D + G+GKV EA LE L T++P + ++ F+V F+W +G PGA Sbjct: 68 RLISATVADAS--GKGKVSKEAFLEGLL--TSIPTLGDKQSAFSVHFEWD-SNMGTPGAF 122 Query: 410 IVKN 421 ++N Sbjct: 123 YIEN 126
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 66.2 bits (160), Expect = 3e-11 Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 13/119 (10%) Frame = +2 Query: 104 GLRGARLKGSVVLMRKNALDFND-------------FGATVMDGVTELLGRGVTCQLISS 244 G +G ++KG++V+M+KN LD N F + +D +T ++ QLIS+ Sbjct: 5 GQKGQKIKGTMVVMQKNVLDINSITSVGGIVDQGLGFIGSAVDALT-FAATKISIQLISA 63 Query: 245 TNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKN 421 T D GG+GK+G NL + LP + GE + V F+W D G+PGA +KN Sbjct: 64 TKAD---GGKGKIGKSTNLRGKI---TLPTLGAGEQAYDVNFEWDSD-FGIPGAFYIKN 115
>UL14_EHV1V (P84404) Hypothetical gene 48 protein| Length = 317 Score = 31.6 bits (70), Expect = 0.89 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -1 Query: 184 GGAEVVEVERVLAHEDDGALEAG-APEAPRQVAHDAADAKHLRSISEECGTLAKLARCGA 8 GG EV + + L HED+ L EAPR AAD RS + ARCGA Sbjct: 132 GGGEVGDPQEWLGHEDEALLMRWMLEEAPRVSTRIAADPHSPRSTCPAPRKAPEDARCGA 191
>UL14_EHV1B (P28949) Hypothetical gene 48 protein| Length = 317 Score = 31.6 bits (70), Expect = 0.89 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -1 Query: 184 GGAEVVEVERVLAHEDDGALEAG-APEAPRQVAHDAADAKHLRSISEECGTLAKLARCGA 8 GG EV + + L HED+ L EAPR AAD RS + ARCGA Sbjct: 132 GGGEVGDPQEWLGHEDEALLMRWMLEEAPRVSTRIAADPHSPRSTCPAPRKAPEDARCGA 191
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 30.4 bits (67), Expect = 2.0 Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 9/120 (7%) Frame = +2 Query: 89 SDLTGGLRGAR--------LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISS 244 S + GG G R L+ ++ + RK D + A +D + +++GR V +LIS+ Sbjct: 61 SGIKGGGAGERRPAPEKVALRAALTVRRKQKEDIKEAVAGHLDALWDMVGRNVVLELIST 120 Query: 245 TNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVD-KLGVPGAIIVKN 421 H + +++ W G++ T +++VD G PGAI V N Sbjct: 121 K--IHPRTKKPMQSGRVSIKDWCQKRG----AKGDH-VVYTAEFTVDADFGEPGAIAVAN 173
>GLGC_ERWCT (Q6CZK2) Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)| (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (ADPGlc PPase) Length = 425 Score = 30.4 bits (67), Expect = 2.0 Identities = 32/102 (31%), Positives = 42/102 (41%), Gaps = 8/102 (7%) Frame = +2 Query: 59 AKMFGVGGIVSDLTGGLRGARLKGSVVLMRKNALDFN------DFGAT--VMDGVTELLG 214 A+ + + L GG RG RLKG L K A+ F DF + + G+ + Sbjct: 13 ARQLPLKSVALILAGG-RGTRLKGLTALRAKPAVHFGGKFRIIDFALSNCLNSGIRRI-- 69 Query: 215 RGVTCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFIT 340 GV Q S T V H G + AE N LLP + T Sbjct: 70 -GVITQYQSHTLVQHIQRGWSFLNAEMNEFVDLLPAQQRYST 110
>PGBM_MOUSE (Q05793) Basement membrane-specific heparan sulfate proteoglycan core| protein precursor (HSPG) (Perlecan) (PLC) Length = 3707 Score = 30.0 bits (66), Expect = 2.6 Identities = 17/61 (27%), Positives = 27/61 (44%) Frame = -2 Query: 408 MAPGTPSLSTDQSKVTANLFSPVVMNGRFVGRSHCSRFASAPTFPRPPLLWSTLVELMSW 229 +APGTP + ++S++T + HCS + P P + WS L + W Sbjct: 2528 VAPGTPQVQVEESELT--------LEAGHTATLHCSATGNPP----PTIHWSKLRAPLPW 2575 Query: 228 Q 226 Q Sbjct: 2576 Q 2576
>YPHD_ECOLI (P77315) Hypothetical ABC transporter permease protein yphD| Length = 332 Score = 29.6 bits (65), Expect = 3.4 Identities = 21/57 (36%), Positives = 30/57 (52%) Frame = +2 Query: 50 RDRAKMFGVGGIVSDLTGGLRGARLKGSVVLMRKNALDFNDFGATVMDGVTELLGRG 220 R R +F + G+++ +TG L ARL GS N L+F+ A V+ G GRG Sbjct: 221 RVRILIFTLSGLLAAVTGILLAARL-GSGNAGAANGLEFDVIAAVVVGGTALSGGRG 276
>NPAS3_HUMAN (Q8IXF0) Neuronal PAS domain protein 3 (Neuronal PAS3) (Member of| PAS protein 6) (MOP6) Length = 933 Score = 29.6 bits (65), Expect = 3.4 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = -2 Query: 222 TPRPRSSVTPSMTVAPKSLKSSAFLRMRTT 133 TP P S +PS+ +L+ S F+RM++T Sbjct: 241 TPEPVESTSPSLLTTDNTLERSFFIRMKST 270
>TRPM2_HUMAN (O94759) Transient receptor potential cation channel subfamily M| member 2 (EC 3.6.1.13) (Long transient receptor potential channel 2) (LTrpC2) (LTrpC-2) (Transient receptor potential channel 7) (TrpC7) (Estrogen-responsive element-associated Length = 1503 Score = 29.6 bits (65), Expect = 3.4 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = +2 Query: 140 LMRKNALDFNDFGATVMDGVTELLGRGVTCQLISST 247 LM+K AL F+DF + G L G+TC+LI +T Sbjct: 856 LMKKAALYFSDFWNKLDVGAILLFVAGLTCRLIPAT 891
>IWS1A_XENLA (Q6DE96) IWS1-like protein A| Length = 836 Score = 29.3 bits (64), Expect = 4.4 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%) Frame = -1 Query: 187 DGGAEVVEVERVLAHEDDG---ALEAGAPEAPRQVAH-DAADAKH 65 DGGA V+ ER A +D+G E G+PE + H D D KH Sbjct: 13 DGGATPVQDERDSASDDEGNEQRSEPGSPEHQSEDEHSDVEDHKH 57
>RMT2_ASHGO (Q759W1) Arginine N-methyltransferase 2 (EC 2.1.1.-)| Length = 413 Score = 29.3 bits (64), Expect = 4.4 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 4/52 (7%) Frame = +2 Query: 287 AEANLEQWLLPTNLPFI----TTGENKFAVTFDWSVDKLGVPGAIIVKNTTP 430 A A + L T L +I T N+ V DW D + V A IVKN P Sbjct: 191 ATAAHQDTYLQTELEYIPGALVTKHNRDGVMMDWETDIMRVAAASIVKNREP 242
>PROML_BRARE (Q9W735) Prominin-like protein (Fragment)| Length = 713 Score = 29.3 bits (64), Expect = 4.4 Identities = 21/83 (25%), Positives = 36/83 (43%) Frame = +2 Query: 146 RKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTN 325 RKNA F DF T++ T ++ GV C ++ N+ G + L+ +N Sbjct: 144 RKNADCFEDFLTTLLLTTTFIITAGVLCAYAANQNLSSQLKGMRR----------LVKSN 193 Query: 326 LPFITTGENKFAVTFDWSVDKLG 394 L + T N+ D+ + + G Sbjct: 194 LKDLHTFANQTPAQIDYLISRYG 216
>ATP7A_MOUSE (Q64430) Copper-transporting ATPase 1 (EC 3.6.3.4) (Copper pump 1)| (Menkes disease-associated protein homolog) Length = 1491 Score = 28.5 bits (62), Expect = 7.6 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 8/72 (11%) Frame = +2 Query: 38 ATLLRDRAKMFGVGGIVSDLTGGLRGARLKGSVVLMRKNALDFND--FGATVMD------ 193 A + R+ + G+ ++ LT G R +V+ R A + FGA VM+ Sbjct: 495 ANIERNLRREEGIYSVLVALTAGKAEVRYNPAVIQPRVIAEFIRELGFGAMVMENAGEGN 554 Query: 194 GVTELLGRGVTC 229 G+ EL+ RG+TC Sbjct: 555 GILELVVRGMTC 566
>TLP_PRUAV (P50694) Thaumatin-like protein precursor| Length = 245 Score = 28.5 bits (62), Expect = 7.6 Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 10/51 (19%) Frame = -2 Query: 411 MMAPGT------PSLSTD----QSKVTANLFSPVVMNGRFVGRSHCSRFAS 289 M+ PGT P LST S+ + L +PV NGRF R+ CS AS Sbjct: 35 MVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDAS 85
>PEPP2_HUMAN (Q9BQY4) Paired-like homeobox protein PEPP-2 (Testis homeobox gene| 1) Length = 288 Score = 28.5 bits (62), Expect = 7.6 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Frame = -2 Query: 417 LTMMAPGTPSLSTDQSKVTANLFSPVVMNGRFVGRSHCSRFA-SAPTFPRPPL 262 L MA G P + T +TA LF + + F SH S P FP P L Sbjct: 202 LPFMAVGQPVMVTAAEAITAPLFISGMRDDYFWDHSHSSSLCFPMPPFPPPSL 254
>IWS1_XENTR (Q505H7) IWS1-like protein| Length = 909 Score = 28.5 bits (62), Expect = 7.6 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 6/47 (12%) Frame = -1 Query: 187 DGGAEVVEVERVLAHEDDG-----ALEAGAPEAPRQVAH-DAADAKH 65 DGGA V+ ER A +D+G E G+PE + H D D KH Sbjct: 15 DGGATPVQDERDSASDDEGNEREQRSEPGSPERQSEDEHSDIEDNKH 61
>MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia protein 4| (Trithorax homolog 2) Length = 2715 Score = 28.5 bits (62), Expect = 7.6 Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 1/85 (1%) Frame = -2 Query: 435 LGGVVFLTMMAPGTPSLSTDQSKVTANLFSPVVMNGRFVGRSHCSRFASAPTFPR-PPLL 259 LGGV F + +PG+PS T P V + F SR S P PR PP Sbjct: 1877 LGGVSFGPLPSPGSPSSLTHH--------IPTVGDPDFPAPPRRSRRPS-PLAPRPPPSR 1927 Query: 258 WSTLVELMSWQVTPRPRSSVTPSMT 184 W++ S Q+ P +SV ++T Sbjct: 1928 WASPPLKTSPQLRVPPPTSVVTALT 1952
>NPAS3_MOUSE (Q9QZQ0) Neuronal PAS domain protein 3 (Neuronal PAS3) (Member of| PAS protein 6) (MOP6) Length = 925 Score = 28.5 bits (62), Expect = 7.6 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = -2 Query: 222 TPRPRSSVTPSMTVAPKSLKSSAFLRMRTT 133 TP P + +PS+ +L+ S F+RM++T Sbjct: 246 TPEPVETTSPSLLTTDNTLERSFFIRMKST 275
>SIPD_SALTY (Q56026) Cell invasion protein sipD (Salmonella invasion protein D)| Length = 343 Score = 28.5 bits (62), Expect = 7.6 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 11/69 (15%) Frame = +2 Query: 230 QLISSTNVDHNNGGRG-KVGAEANLEQWLLPTNLP--FITTGENKFAVTFDWS------- 379 Q+ S+T + G G KV EA QWL NLP + + + + VT D + Sbjct: 207 QINSNTVLFPAQSGSGVKVATEAEARQWLSELNLPNSCLKSYGSGYVVTVDLTPLQKMVQ 266 Query: 380 -VDKLGVPG 403 +D LG PG Sbjct: 267 DIDGLGAPG 275
>PYRH_DEIRA (Q9RU81) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate| kinase) (UMP kinase) Length = 245 Score = 28.1 bits (61), Expect = 9.9 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 4/44 (9%) Frame = +2 Query: 44 LLRDRAKMFGVGG----IVSDLTGGLRGARLKGSVVLMRKNALD 163 L + R +FG G +D T LR + VVLM KNA+D Sbjct: 127 LEKGRVVIFGGGNGAPFFTTDTTSTLRALEIGADVVLMAKNAVD 170
>RL18_MYCLE (O32999) 50S ribosomal protein L18| Length = 122 Score = 28.1 bits (61), Expect = 9.9 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = +2 Query: 44 LLRDRAKMFGVGGIVSDLTGGLRGARLKGSVVLMRKNALDF 166 L+ +RAK G+ +V D G G R+ +R+N L+F Sbjct: 82 LIAERAKAAGINTVVFDRGGYTYGGRIAALADSVRENGLNF 122
>AGPA_RHIME (Q9X4Y1) Periplasmic alpha-galactoside-binding protein precursor| Length = 693 Score = 28.1 bits (61), Expect = 9.9 Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 1/102 (0%) Frame = +2 Query: 122 LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHN-NGGRGKVGAEAN 298 L+G+ VL+ K L D V +L GR V L+ +++ + N G VG Sbjct: 460 LEGAKVLLEKVGLKDTDGNGFVNFPAGKLGGRDVEIVLLVNSDYSTDRNLAEGMVGQMEK 519 Query: 299 LEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNT 424 L ++ L +A FDW + + A +V+NT Sbjct: 520 LGLRVVLNALDGKQRDAANYAGRFDWMIHRNTAEFASVVQNT 561
>TLP2_PRUPE (P83335) Thaumatin-like protein 2 precursor (PpAZ8)| Length = 242 Score = 28.1 bits (61), Expect = 9.9 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 4/41 (9%) Frame = -2 Query: 399 GTPSLSTD----QSKVTANLFSPVVMNGRFVGRSHCSRFAS 289 G P LST S+ + L +PV +GRF R+ CS AS Sbjct: 42 GNPQLSTTGFELASQASFQLDTPVPWSGRFWARTRCSTDAS 82
>CN103_MOUSE (Q80XK6) Protein C14orf103 homolog| Length = 908 Score = 28.1 bits (61), Expect = 9.9 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = -1 Query: 118 GAPEAPRQVAHDAADAKHLRSISEECGTLAKL 23 G APR H ++D H+R+ S+ C L L Sbjct: 159 GEQTAPRFELHCSSDVVHIRTCSDSCAALMNL 190
>SYH_BURMA (Q62JW5) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 446 Score = 28.1 bits (61), Expect = 9.9 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 6/43 (13%) Frame = +2 Query: 299 LEQWLLPTNLPF-----ITTGENKFAVT-FDWSVDKLGVPGAI 409 L+Q L NLPF + G + + +T F+W DKLG G + Sbjct: 246 LQQLLKANNLPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTV 288
>GLI3_MOUSE (Q61602) Zinc finger protein GLI3| Length = 1596 Score = 28.1 bits (61), Expect = 9.9 Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 14/80 (17%) Frame = +2 Query: 104 GLRGARLKGSVVLMRKNALDF------NDFGATVMDGV--TELLGRGVTCQLISSTNVDH 259 G++G++LKG+ + LDF N+ ++G+ + +G+G + S ++ H Sbjct: 1277 GIQGSKLKGNSLQENGGLLDFSLSVAPNELAGNTVNGMQTQDQMGQGYIAHQLLSGSMQH 1336 Query: 260 NNGGR------GKVGAEANL 301 R G+VGA +++ Sbjct: 1337 QGPSRPGQQVLGQVGATSHI 1356 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,821,720 Number of Sequences: 219361 Number of extensions: 777819 Number of successful extensions: 3061 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 2939 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3022 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
