Clone Name | bastl26a11 |
---|---|
Clone Library Name | barley_pub |
>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c| precursor Length = 943 Score = 29.6 bits (65), Expect = 3.3 Identities = 19/79 (24%), Positives = 31/79 (39%) Frame = -2 Query: 417 SASVPPNTAQKSRSAANTAGAVSSAILCXXXXXXXXXLTGD*KXXXXXXXXXXXXXXRSD 238 S+S+ ++ + SA T+ ++SS + T S Sbjct: 224 SSSLASSSLNSTTSATATSSSISSTVSSSTPLTSSNSTTA---ATSASATSSSAQYNTSS 280 Query: 237 LSPTATPQRPSLSTACSTT 181 L P++TP LS+A STT Sbjct: 281 LLPSSTPSSTPLSSANSTT 299
>MIAA_THET2 (Q72L59) tRNA delta(2)-isopentenylpyrophosphate transferase (EC| 2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPTase) (IPPT) Length = 302 Score = 29.6 bits (65), Expect = 3.3 Identities = 25/72 (34%), Positives = 34/72 (47%) Frame = -1 Query: 319 GEEPPDRRLEATATGMRLRTTAMSQVGSEPDSDAPTPEPIHRLLHHLSDLPFLQDSPT*H 140 GEE P + A AT M G + +D PTPE R+ HHL D+ L+ Sbjct: 23 GEEVPVEVVSADAT--------MVYRGLDIGTDKPTPEERARVPHHLVDV--LEPHEAMS 72 Query: 139 PATTCSLAKQAI 104 A +LA++AI Sbjct: 73 VARFLALAEEAI 84
>KINB2_ARATH (Q9SCY5) SNF1-related protein kinase regulatory subunit beta-2| (AKIN beta2) (AKINB2) Length = 289 Score = 29.3 bits (64), Expect = 4.3 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = -1 Query: 331 AQERGEEPPDRRLEATATGMRLRTTAMSQVGSEPDSDAPTPEPIHRLLHHL 179 A++ +EPP L+ T ++ + PD +P P P H +L+HL Sbjct: 211 AEDYSKEPP-------VVPPHLQMTLLNLPAANPDIPSPLPRPQHVILNHL 254
>NOP12_NEUCR (Q7S2L7) Nucleolar protein 12| Length = 594 Score = 28.5 bits (62), Expect = 7.4 Identities = 14/46 (30%), Positives = 23/46 (50%) Frame = -1 Query: 325 ERGEEPPDRRLEATATGMRLRTTAMSQVGSEPDSDAPTPEPIHRLL 188 E EEP +RL+A + TA ++ + DS++ P+H L Sbjct: 141 EDDEEPAGKRLKADEQSGEKKDTAKAEKKDDDDSESADEVPVHESL 186
>MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog| (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3) (EC 2.1.1.43) (Homologous to ALR protein) Length = 4911 Score = 28.1 bits (61), Expect = 9.7 Identities = 15/35 (42%), Positives = 18/35 (51%) Frame = -1 Query: 220 APTPEPIHRLLHHLSDLPFLQDSPT*HPATTCSLA 116 A TP PI H+ S+ P+ Q T HPA S A Sbjct: 2076 ALTPRPIDNFSHNQSNDPYSQPPLTPHPAVNESFA 2110
>GLYA_SALRD (Q2S4G9) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 432 Score = 28.1 bits (61), Expect = 9.7 Identities = 17/46 (36%), Positives = 22/46 (47%) Frame = -1 Query: 310 PPDRRLEATATGMRLRTTAMSQVGSEPDSDAPTPEPIHRLLHHLSD 173 P D + +G+RL T AM+ G PD A E I R+L D Sbjct: 361 PFDDKSPFVTSGLRLGTPAMTTRGFGPDEFAHVAEMIDRVLQDPED 406 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,753,838 Number of Sequences: 219361 Number of extensions: 692978 Number of successful extensions: 2532 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2447 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2530 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)