ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl26a11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF102868.1| Hordeum vulgare subsp. vulgare beta-D-glucan exohydrolase isoenzyme ExoI mRNA, complete cds Length = 2161 Score = 210 bits (106), Expect = 3e-51 Identities = 109/110 (99%) Strand = Plus / Plus Query: 322 gctcctgcgccggcacaggatggcgctgctcacggcccccgcggtgttcgccgcgctcct 381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gctcctgcgccggcacaggatggcgctgctcacggcccccgcggtgttcgccgcgctcct 60 Query: 382 gctcttctgggccgtgttcggcggcacggacgccgactacgtgctctaca 431 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 gctcttctgggccgtgctcggcggcacggacgccgactacgtgctctaca 110
>gb|AF064707.1|AF064707 Zea mays exhydrolase II mRNA, complete cds Length = 2231 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 301 ggtcaggaggctcctccccccgctcctgcgccggcacaggatggcgctgctcacggcccc 360 |||| |||||| |||| |||||||||| ||||| ||||||||||||||||||||||| || Sbjct: 62 ggtccggaggcgcctcgccccgctcctccgccgccacaggatggcgctgctcacggcgcc 121 Query: 361 cgcggtg 367 |||||| Sbjct: 122 ggcggtg 128
>dbj|AK073110.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023H22, full insert sequence Length = 2424 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 281 cgccgtcgcttctaatctccggtcaggaggctcctccccccgctcctgcgccggcacagg 340 ||||||||||||||| |||||||| |||||| || | ||||||||| |||||||| ||| Sbjct: 307 cgccgtcgcttctaaactccggtccggaggcggctgctcccgctccttcgccggcagagg 366 Query: 341 atggcgctgctcacggc 357 |||||| ||||| |||| Sbjct: 367 atggcggtgctcgcggc 383
>gb|AY103736.1| Zea mays PCO061864 mRNA sequence Length = 2767 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 301 ggtcaggaggctcctccccccgctcctgcgccggcacaggatggcgctgctcacggcccc 360 |||| |||||| |||| ||||||||| ||||| ||| ||||||||||||||||||| || Sbjct: 587 ggtccggaggcgcctcgtcccgctcctccgccgccaccggatggcgctgctcacggcgcc 646 Query: 361 cgcggtg 367 |||||| Sbjct: 647 ggcggtg 653
>gb|AC153357.4| Mus musculus BAC clone RP24-124N8 from chromosome 10, complete sequence Length = 189789 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Minus Query: 32 cccgccccgccccgccccatctt 54 ||||||||||||||||||||||| Sbjct: 183383 cccgccccgccccgccccatctt 183361
>gb|AF204063.1| Oryza sativa MADS box protein MADS1 gene, promoter and complete cds Length = 11851 Score = 46.1 bits (23), Expect = 0.095 Identities = 26/27 (96%) Strand = Plus / Minus Query: 41 ccccgccccatcttcttcctcctcctc 67 |||| |||||||||||||||||||||| Sbjct: 1992 cccctccccatcttcttcctcctcctc 1966
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.095 Identities = 26/27 (96%) Strand = Plus / Plus Query: 41 ccccgccccatcttcttcctcctcctc 67 |||| |||||||||||||||||||||| Sbjct: 6029545 cccctccccatcttcttcctcctcctc 6029571
>gb|AY895163.1| Oryza sativa (indica cultivar-group) MADS box protein (MADS1) gene, promoter region and partial cds Length = 4288 Score = 46.1 bits (23), Expect = 0.095 Identities = 26/27 (96%) Strand = Plus / Minus Query: 41 ccccgccccatcttcttcctcctcctc 67 |||| |||||||||||||||||||||| Sbjct: 3888 cccctccccatcttcttcctcctcctc 3862
>gb|AC126671.3| Mus musculus BAC clone RP24-472G2 from chromosome 16, complete sequence Length = 172980 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 46 ccccatcttcttcctcctcctcc 68 ||||||||||||||||||||||| Sbjct: 33728 ccccatcttcttcctcctcctcc 33750
>gb|AC135158.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1193C08, complete sequence Length = 111961 Score = 46.1 bits (23), Expect = 0.095 Identities = 26/27 (96%) Strand = Plus / Plus Query: 41 ccccgccccatcttcttcctcctcctc 67 |||| |||||||||||||||||||||| Sbjct: 88080 cccctccccatcttcttcctcctcctc 88106
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.095 Identities = 26/27 (96%) Strand = Plus / Plus Query: 41 ccccgccccatcttcttcctcctcctc 67 |||| |||||||||||||||||||||| Sbjct: 6028758 cccctccccatcttcttcctcctcctc 6028784
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 46 ccccatcttcttcctcctcctcc 68 ||||||||||||||||||||||| Sbjct: 39051523 ccccatcttcttcctcctcctcc 39051545
>gb|AC105732.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090D11, complete sequence Length = 174865 Score = 46.1 bits (23), Expect = 0.095 Identities = 26/27 (96%) Strand = Plus / Plus Query: 41 ccccgccccatcttcttcctcctcctc 67 |||| |||||||||||||||||||||| Sbjct: 23021 cccctccccatcttcttcctcctcctc 23047
>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0674H09 Length = 142955 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 46 ccccatcttcttcctcctcctcc 68 ||||||||||||||||||||||| Sbjct: 125156 ccccatcttcttcctcctcctcc 125178
>dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506A10 Length = 145265 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Plus Query: 46 ccccatcttcttcctcctcctcc 68 ||||||||||||||||||||||| Sbjct: 69503 ccccatcttcttcctcctcctcc 69525
>dbj|AK103766.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033143H20, full insert sequence Length = 3420 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Minus Query: 46 ccccatcttcttcctcctcctcc 68 ||||||||||||||||||||||| Sbjct: 267 ccccatcttcttcctcctcctcc 245
>dbj|AK070981.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073O08, full insert sequence Length = 1188 Score = 46.1 bits (23), Expect = 0.095 Identities = 26/27 (96%) Strand = Plus / Minus Query: 41 ccccgccccatcttcttcctcctcctc 67 |||| |||||||||||||||||||||| Sbjct: 99 cccctccccatcttcttcctcctcctc 73
>dbj|AK069728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029M13, full insert sequence Length = 1152 Score = 46.1 bits (23), Expect = 0.095 Identities = 26/27 (96%) Strand = Plus / Minus Query: 41 ccccgccccatcttcttcctcctcctc 67 |||| |||||||||||||||||||||| Sbjct: 103 cccctccccatcttcttcctcctcctc 77
>gb|AC140381.3| Mus musculus BAC clone RP23-176M4 from 10, complete sequence Length = 223470 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Minus Query: 32 cccgccccgccccgccccatctt 54 ||||||||||||||||||||||| Sbjct: 120606 cccgccccgccccgccccatctt 120584
>dbj|AP004494.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT09I17, TM0026, complete sequence Length = 103129 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctccggc 71 ||||||||||||||||||||||| Sbjct: 92792 catcttcttcctcctcctccggc 92770
>gb|L34271.1|RICMADS1TF Oryza sativa box protein (MADS1) mRNA, complete cds Length = 1144 Score = 46.1 bits (23), Expect = 0.095 Identities = 26/27 (96%) Strand = Plus / Minus Query: 41 ccccgccccatcttcttcctcctcctc 67 |||| |||||||||||||||||||||| Sbjct: 78 cccctccccatcttcttcctcctcctc 52
>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence Length = 1608198 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 tcttcttcctcctcctccggcc 72 |||||||||||||||||||||| Sbjct: 538709 tcttcttcctcctcctccggcc 538688
>gb|AC104617.9| Trypanosoma brucei chromosome 5 clone RPCI93-1P6, complete sequence Length = 152664 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 51 tcttcttcctcctcctccggcc 72 |||||||||||||||||||||| Sbjct: 138563 tcttcttcctcctcctccggcc 138584
>gb|AC126457.3| Mus musculus BAC clone RP23-68E6 from 16, complete sequence Length = 147585 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 33 ccgccccgccccgccccatctt 54 |||||||||||||||||||||| Sbjct: 11488 ccgccccgccccgccccatctt 11509
>emb|AL691484.14| Mouse DNA sequence from clone RP23-230C2 on chromosome 4 Contains the Atp6v1g1 gene for 13kD lysosomal H+ transporting ATPase V1 subunit G variant 1, four novel genes (including 1700018C11Rik), a ribosomal protein L35a (Rpl35a) pseudogene and two CpG islands, complete sequence Length = 116289 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 32 cccgccccgccccgccccatct 53 |||||||||||||||||||||| Sbjct: 23708 cccgccccgccccgccccatct 23729
>gb|AC011505.6| Homo sapiens chromosome 19 clone CTD-2081K17, complete sequence Length = 167417 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 46 ccccatcttcttcctcctcctc 67 |||||||||||||||||||||| Sbjct: 15604 ccccatcttcttcctcctcctc 15583
>gb|AC123977.12| Mus musculus strain C57BL/6J clone rp23-81d13 map 16, complete sequence Length = 212237 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 33 ccgccccgccccgccccatctt 54 |||||||||||||||||||||| Sbjct: 6003 ccgccccgccccgccccatctt 5982
>gb|AC087867.5| Genomic sequence for Mus musculus, clone RP23-183P4, complete sequence Length = 217281 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 46 ccccatcttcttcctcctcctc 67 |||||||||||||||||||||| Sbjct: 17529 ccccatcttcttcctcctcctc 17550
>gb|AC153372.5| Mus musculus 6 BAC RP23-358G19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 230623 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 46 ccccatcttcttcctcctcctc 67 |||||||||||||||||||||| Sbjct: 209737 ccccatcttcttcctcctcctc 209758
>gb|AC090977.48| Mus musculus strain C57BL/6J clone rp23-213m14 map 16, complete sequence Length = 208412 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 33 ccgccccgccccgccccatctt 54 |||||||||||||||||||||| Sbjct: 119255 ccgccccgccccgccccatctt 119276
>gb|AC153868.3| Mus musculus BAC RP23-384D16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 211603 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 46 ccccatcttcttcctcctcctc 67 |||||||||||||||||||||| Sbjct: 31766 ccccatcttcttcctcctcctc 31787
>dbj|AP000940.8| Homo sapiens genomic DNA, chromosome 18 clone:RP11-855E1, complete sequence Length = 159082 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 cccatcttcttcctcctcctcc 68 |||||||||||||||||||||| Sbjct: 123771 cccatcttcttcctcctcctcc 123792
>gb|AC125380.4| Mus musculus BAC clone RP23-204N23 from 1, complete sequence Length = 214005 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 48 ccatcttcttcctcctcctccg 69 |||||||||||||||||||||| Sbjct: 117568 ccatcttcttcctcctcctccg 117589
>emb|AL583893.17| Mouse DNA sequence from clone RP23-189A18 on chromosome 15, complete sequence Length = 184558 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 46 ccccatcttcttcctcctcctc 67 |||||||||||||||||||||| Sbjct: 147724 ccccatcttcttcctcctcctc 147703
>gb|AC166830.3| Mus musculus BAC clone RP23-246O1 from chromosome 13, complete sequence Length = 213487 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 ccatcttcttcctcctcctcc 68 ||||||||||||||||||||| Sbjct: 35528 ccatcttcttcctcctcctcc 35508
>gb|AC158789.4| Mus musculus chromosome 5, clone RP23-192C21, complete sequence Length = 218871 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 32 cccgccccgccccgccccatc 52 ||||||||||||||||||||| Sbjct: 81536 cccgccccgccccgccccatc 81556 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 63005 catcttcttcctcctcctcc 62986
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 gcaagtggtggccgggtgtca 145 ||||||||||||||||||||| Sbjct: 559212 gcaagtggtggccgggtgtca 559232
>gb|AC124675.9| Mus musculus chromosome 15, clone RP24-88M7, complete sequence Length = 207904 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 cccgccccgccccgccccatc 52 ||||||||||||||||||||| Sbjct: 66412 cccgccccgccccgccccatc 66392
>ref|XM_810181.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508857.100) partial mRNA Length = 2580 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttcttcctcctcctccggc 71 ||||||||||||||||||||| Sbjct: 563 tcttcttcctcctcctccggc 543
>emb|Z95115.1|HS445C9 Human DNA sequence from clone CTA-445C9 on chromosome 22q12.1, complete sequence Length = 131398 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 32 cccgccccgccccgccccatc 52 ||||||||||||||||||||| Sbjct: 87659 cccgccccgccccgccccatc 87679
>emb|AL807752.10| Human DNA sequence from clone RP11-229P13 on chromosome 9 Contains a ribosomal protein L30 (RPL30) pseudogene, the gene for the possible ortholog of mouse f-box and WD-40 domain protein 5 (FBXW5), the C8G gene for complement 8 (gamma polypeptide), a novel gene for the possible ortholog to RIKEN mouse CDNA 9230102M18 (9230192M18Rik), five novel genes, the PTGDS gene for prostaglandin D2 synthase 21kDa (brain), the CLIC3 gene for chloride intracellular channel 3, the ABCA2 gene for ATP-binding cassette (sub-family A (ABC1), member 2), the FUT7 gene for fucosyltransferase 7 (alpha (1,3) fucosyltransferase), the NPDC1 gene for neural proliferation, differentiation and control 1, the ENTPD2 gene for ectonucleoside triphosphate diphosphohydrolase 2, a novel gene for the possible ortholog of RIKEN mouse cDNA 2010317E24 (2010317E25Rik), a novel gene (LOC91373), the 5' end of the MAN1B1 gene for mannosidase (alpha, class 1B, member 1), five novel genes and seventeen CpG islands, complete sequence Length = 158699 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 cccgccccgccccgccccatc 52 ||||||||||||||||||||| Sbjct: 147377 cccgccccgccccgccccatc 147357
>emb|AL157815.12| Human DNA sequence from clone RP11-306O1 on chromosome 13q22.1-32.1 Contains a novel gene, complete sequence Length = 166122 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 ccatcttcttcctcctcctcc 68 ||||||||||||||||||||| Sbjct: 25267 ccatcttcttcctcctcctcc 25247
>ref|XM_778545.1| PREDICTED: Strongylocentrotus purpuratus similar to down-regulated by Ctnnb1, a (LOC578374), mRNA Length = 1533 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 ccatcttcttcctcctcctcc 68 ||||||||||||||||||||| Sbjct: 598 ccatcttcttcctcctcctcc 618
>ref|NM_001016444.2| Xenopus tropicalis zinc finger, CCCH-type with G patch domain (zgpat), mRNA Length = 1746 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 ccatcttcttcctcctcctcc 68 ||||||||||||||||||||| Sbjct: 397 ccatcttcttcctcctcctcc 377
>gb|AC138230.5| Homo sapiens chromosome 11, clone RP13-317D12, complete sequence Length = 187160 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 gcccgccccgccccgccccat 51 ||||||||||||||||||||| Sbjct: 124186 gcccgccccgccccgccccat 124166
>gb|AC159710.9| Mus musculus 10 BAC RP24-325N16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 204302 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 ccatcttcttcctcctcctcc 68 ||||||||||||||||||||| Sbjct: 119455 ccatcttcttcctcctcctcc 119475
>gb|AC161267.2| Mus musculus BAC clone RP23-247F21 from chromosome 13, complete sequence Length = 176277 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 ccatcttcttcctcctcctcc 68 ||||||||||||||||||||| Sbjct: 156586 ccatcttcttcctcctcctcc 156566
>gb|AC137894.5| Homo sapiens chromosome 11, clone RP13-46H24, complete sequence Length = 165000 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 gcccgccccgccccgccccat 51 ||||||||||||||||||||| Sbjct: 29072 gcccgccccgccccgccccat 29052
>emb|BX933580.2| Gallus gallus finished cDNA, clone ChEST50d4 Length = 751 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 tcttcttcctcctcctccggc 71 ||||||||||||||||||||| Sbjct: 86 tcttcttcctcctcctccggc 66
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 ccatcttcttcctcctcctcc 68 ||||||||||||||||||||| Sbjct: 21890114 ccatcttcttcctcctcctcc 21890094
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 40 gccccgccccatcttcttcctcctc 64 ||||| ||||||||||||||||||| Sbjct: 30681839 gccccaccccatcttcttcctcctc 30681815 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 23796684 catcttcttcctcctcctcc 23796703
>emb|AL606452.2|OSJN00007 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000114_01, complete sequence Length = 127713 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 ccatcttcttcctcctcctcc 68 ||||||||||||||||||||| Sbjct: 74715 ccatcttcttcctcctcctcc 74695
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 350 ctcacggcccccgcggtgttcgccgcgctcctg 382 ||||| ||| |||||||||||||| |||||||| Sbjct: 2734081 ctcactgccgccgcggtgttcgccccgctcctg 2734113
>dbj|AP006616.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1206D04 Length = 130176 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 40 gccccgccccatcttcttcctcctc 64 ||||| ||||||||||||||||||| Sbjct: 84495 gccccaccccatcttcttcctcctc 84471
>gb|AC099627.10| Mus musculus chromosome 7, clone RP24-69E5, complete sequence Length = 244051 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 cccgccccgccccgccccatc 52 ||||||||||||||||||||| Sbjct: 71389 cccgccccgccccgccccatc 71369
>dbj|AK109788.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-D03, full insert sequence Length = 2846 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 ccatcttcttcctcctcctcc 68 ||||||||||||||||||||| Sbjct: 14 ccatcttcttcctcctcctcc 34
>emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right terminal inverted repeat Length = 243019 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 249 ctcatcgccgtcgtcctcagccgca 273 ||||||||||||| ||||||||||| Sbjct: 172079 ctcatcgccgtcggcctcagccgca 172055
>gb|AC124129.13| Mus musculus chromosome 5, clone RP23-198B3, complete sequence Length = 197543 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 cccgccccgccccgccccatc 52 ||||||||||||||||||||| Sbjct: 115436 cccgccccgccccgccccatc 115416 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 133967 catcttcttcctcctcctcc 133986
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 tcgattgcttgctttgccaga 122 ||||||||||||||||||||| Sbjct: 2340119 tcgattgcttgctttgccaga 2340099
>emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left terminal inverted repeat Length = 273746 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 249 ctcatcgccgtcgtcctcagccgca 273 ||||||||||||| ||||||||||| Sbjct: 172079 ctcatcgccgtcggcctcagccgca 172055
>emb|CR761014.2| Xenopus tropicalis finished cDNA, clone TEgg043k09 Length = 1746 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 ccatcttcttcctcctcctcc 68 ||||||||||||||||||||| Sbjct: 397 ccatcttcttcctcctcctcc 377
>gb|AC162912.5| Mus musculus BAC clone RP24-381G1 from chromosome 13, complete sequence Length = 190181 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 ccatcttcttcctcctcctcc 68 ||||||||||||||||||||| Sbjct: 118860 ccatcttcttcctcctcctcc 118840
>emb|AL691461.22| Mouse DNA sequence from clone RP23-162E10 on chromosome 11, complete sequence Length = 150034 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 ccatcttcttcctcctcctcc 68 ||||||||||||||||||||| Sbjct: 70267 ccatcttcttcctcctcctcc 70247
>emb|AL591582.32| Mouse DNA sequence from clone RP23-403P3 on chromosome 12, complete sequence Length = 168814 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 32 cccgccccgccccgccccatc 52 ||||||||||||||||||||| Sbjct: 8069 cccgccccgccccgccccatc 8089
>gb|AC163629.5| Mus musculus BAC clone RP24-542G7 from chromosome 17, complete sequence Length = 198902 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 cccgccccgccccgccccatc 52 ||||||||||||||||||||| Sbjct: 163562 cccgccccgccccgccccatc 163542
>ref|NM_111951.2| Arabidopsis thaliana unknown protein AT3G11150 mRNA, complete cds Length = 1285 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ccatcttcttcctcctcctc 67 |||||||||||||||||||| Sbjct: 1033 ccatcttcttcctcctcctc 1014
>ref|NM_120941.1| Arabidopsis thaliana unknown protein AT5G08550 mRNA, complete cds Length = 2727 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ccatcttcttcctcctcctc 67 |||||||||||||||||||| Sbjct: 194 ccatcttcttcctcctcctc 175
>ref|NM_180787.1| Arabidopsis thaliana unknown protein AT5G41810 transcript variant AT5G41810.1 mRNA, complete cds Length = 1291 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 tcttcttcctcctcctccgg 70 |||||||||||||||||||| Sbjct: 788 tcttcttcctcctcctccgg 807
>ref|NM_123546.3| Arabidopsis thaliana unknown protein AT5G41810 transcript variant AT5G41810.2 mRNA, complete cds Length = 1269 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 tcttcttcctcctcctccgg 70 |||||||||||||||||||| Sbjct: 766 tcttcttcctcctcctccgg 785
>gb|AY769950.1| Homo sapiens coagulation factor VIII, procoagulant component (hemophilia A) (F8) gene, complete cds Length = 192029 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 110 ttgctttgccagactgcaagtggtggcc 137 |||||||||||| ||||| ||||||||| Sbjct: 152318 ttgctttgccaggctgcatgtggtggcc 152345
>ref|NM_152849.2| Rattus norvegicus homeodomain leucine zipper-encoding gene (Homez), mRNA Length = 1785 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 1601 catcttcttcctcctcctcc 1582
>gb|AC103624.9| Mus musculus chromosome 5, clone RP24-258B22, complete sequence Length = 172330 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 86627 catcttcttcctcctcctcc 86646
>ref|XM_639174.1| Dictyostelium discoideum hypothetical protein (DDB0167567), partial mRNA Length = 2184 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 721 catcttcttcctcctcctcc 702
>ref|XM_512242.1| PREDICTED: Pan troglodytes similar to transcription elongation factor B polypeptide 3 binding protein 1; elongin A binding protein 1 (LOC455555), mRNA Length = 6219 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 41 ccccgccccatcttcttcctcctcctcc 68 |||||||||||| || |||||||||||| Sbjct: 3993 ccccgccccatcctcctcctcctcctcc 4020
>gb|AC159318.4| Mus musculus BAC clone RP23-76M13 from chromosome 12, complete sequence Length = 269200 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 25770 catcttcttcctcctcctcc 25751
>gb|AC159266.3| Mus musculus BAC clone RP24-64D24 from chromosome 8, complete sequence Length = 212727 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 36253 catcttcttcctcctcctcc 36272
>ref|XM_509847.1| PREDICTED: Pan troglodytes apoptotic chromatin condensation inducer 1 (LOC452792), mRNA Length = 3903 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 988 catcttcttcctcctcctcc 969
>ref|XM_509040.1| PREDICTED: Pan troglodytes myeloid/lymphoid or mixed-lineage leukemia 2 (LOC451873), mRNA Length = 15939 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 4249 catcttcttcctcctcctcc 4230
>ref|XM_468290.1| Oryza sativa (japonica cultivar-group), mRNA Length = 716 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 33 ccgccccgccccgccccatcttcttcctcctcctcc 68 |||||||||||| ||||||| || ||| |||||||| Sbjct: 111 ccgccccgcccctccccatcctcctccccctcctcc 76
>ref|NM_001030950.1| Gallus gallus RAD21 homolog (S. pombe) (RAD21), mRNA Length = 3679 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ccatcttcttcctcctcctc 67 |||||||||||||||||||| Sbjct: 1769 ccatcttcttcctcctcctc 1750
>gb|DQ022603.1| Zea mays subsp. mexicana cultivar CIMMYT_11396 Opaque-2 (O2) gene, partial cds Length = 2051 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 123 catcttcttcctcctcctcc 142
>gb|DQ022602.1| Zea mays subsp. mexicana cultivar CIMMYT_11394 Opaque-2 (O2) gene, partial cds Length = 2027 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 119 catcttcttcctcctcctcc 138
>ref|NM_020695.2| Homo sapiens REX1, RNA exonuclease 1 homolog (S. cerevisiae) (REXO1), mRNA Length = 4577 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 41 ccccgccccatcttcttcctcctcctcc 68 |||||||||||| || |||||||||||| Sbjct: 1824 ccccgccccatcctcctcctcctcctcc 1851
>gb|AC125267.18| Mus musculus chromosome 10, clone RP24-483E18, complete sequence Length = 203922 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 118912 catcttcttcctcctcctcc 118893
>gb|AC168273.3| Mus musculus BAC RP23-184H4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 202998 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 126518 catcttcttcctcctcctcc 126537
>ref|NM_026530.2| Mus musculus RIKEN cDNA E130307M08 gene (E130307M08Rik), mRNA Length = 1538 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 557 catcttcttcctcctcctcc 538
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 cgttgcccgccccgccccgcccca 50 |||| ||||||||||||||||||| Sbjct: 619763 cgttccccgccccgccccgcccca 619740
>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete sequence Length = 1194300 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ccatcttcttcctcctcctc 67 |||||||||||||||||||| Sbjct: 1126004 ccatcttcttcctcctcctc 1126023
>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence Length = 1783081 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ctcctccggcctcgccttcc 81 |||||||||||||||||||| Sbjct: 94986 ctcctccggcctcgccttcc 95005
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 gccccatcttcttcctcctc 64 |||||||||||||||||||| Sbjct: 434492 gccccatcttcttcctcctc 434511
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence Length = 285506 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ctcgccttcctcccgccatt 91 |||||||||||||||||||| Sbjct: 192275 ctcgccttcctcccgccatt 192256
>gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017K09, complete sequence Length = 155525 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 51 tcttcttcctcctcctccggcctc 74 |||||||||||||||||| ||||| Sbjct: 71950 tcttcttcctcctcctcctgcctc 71927
>gb|AC165225.5| Mus musculus chromosome 3, clone RP24-70J13, complete sequence Length = 205069 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 159206 catcttcttcctcctcctcc 159187
>gb|AC155163.4| Mus musculus BAC clone RP24-341A18 from chromosome 8, complete sequence Length = 207406 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 gcccgccccgccccgcccca 50 |||||||||||||||||||| Sbjct: 49500 gcccgccccgccccgcccca 49481
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 cgtgttcggcggcacggacg 413 |||||||||||||||||||| Sbjct: 1899879 cgtgttcggcggcacggacg 1899860
>gb|AY136628.2| Petunia integrifolia subsp. inflata S2 self-incompatibility ribonuclease (S2-RNase) and S2-locus F-box protein (SLF2) genes, complete cds Length = 328473 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 cccgccccgccccgccccat 51 |||||||||||||||||||| Sbjct: 285084 cccgccccgccccgccccat 285103
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 ggcccccgcggtgttcgccg 374 |||||||||||||||||||| Sbjct: 3062003 ggcccccgcggtgttcgccg 3061984
>ref|XM_870011.1| PREDICTED: Bos taurus similar to U2 (RNU2) small nuclear RNA auxiliary factor 2 isoform b, transcript variant 2 (LOC507895), mRNA Length = 2327 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgcccgccccgccccgcccc 49 |||||||||||||||||||| Sbjct: 147 tgcccgccccgccccgcccc 128
>ref|XM_883098.1| PREDICTED: Bos taurus similar to U2 (RNU2) small nuclear RNA auxiliary factor 2 isoform b, transcript variant 8 (LOC507895), mRNA Length = 1754 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgcccgccccgccccgcccc 49 |||||||||||||||||||| Sbjct: 147 tgcccgccccgccccgcccc 128
>ref|XM_883095.1| PREDICTED: Bos taurus similar to U2 (RNU2) small nuclear RNA auxiliary factor 2 isoform b, transcript variant 7 (LOC507895), mRNA Length = 1691 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgcccgccccgccccgcccc 49 |||||||||||||||||||| Sbjct: 147 tgcccgccccgccccgcccc 128
>ref|XM_883091.1| PREDICTED: Bos taurus similar to U2 (RNU2) small nuclear RNA auxiliary factor 2 isoform b, transcript variant 6 (LOC507895), mRNA Length = 950 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgcccgccccgccccgcccc 49 |||||||||||||||||||| Sbjct: 147 tgcccgccccgccccgcccc 128
>ref|XM_883085.1| PREDICTED: Bos taurus similar to U2 (RNU2) small nuclear RNA auxiliary factor 2 isoform b, transcript variant 5 (LOC507895), mRNA Length = 937 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgcccgccccgccccgcccc 49 |||||||||||||||||||| Sbjct: 147 tgcccgccccgccccgcccc 128
>ref|XM_584588.2| PREDICTED: Bos taurus similar to U2 (RNU2) small nuclear RNA auxiliary factor 2 isoform b, transcript variant 1 (LOC507895), mRNA Length = 2315 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgcccgccccgccccgcccc 49 |||||||||||||||||||| Sbjct: 147 tgcccgccccgccccgcccc 128
>ref|XM_883073.1| PREDICTED: Bos taurus similar to U2 (RNU2) small nuclear RNA auxiliary factor 2 isoform b, transcript variant 3 (LOC507895), mRNA Length = 1475 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgcccgccccgccccgcccc 49 |||||||||||||||||||| Sbjct: 147 tgcccgccccgccccgcccc 128
>ref|NG_005114.1| Homo sapiens coagulation factor VIII region (F8@) on chromosome X Length = 652898 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 110 ttgctttgccagactgcaagtggtggcc 137 |||||||||||| ||||| ||||||||| Sbjct: 38245 ttgctttgccaggctgcatgtggtggcc 38218
>gb|AC140329.3| Mus musculus BAC clone RP23-404O10 from chromosome 14, complete sequence Length = 202811 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 21516 catcttcttcctcctcctcc 21497
>gb|AC147222.4| Mus musculus BAC clone RP23-69L20 from chromosome 6, complete sequence Length = 182525 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 20800 catcttcttcctcctcctcc 20819
>gb|AC183761.3| Pan troglodytes BAC clone CH251-710C5 from chromosome 7, complete sequence Length = 205916 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 cccatcttcttcctcctcct 66 |||||||||||||||||||| Sbjct: 73956 cccatcttcttcctcctcct 73975
>gb|BC017625.1| Mus musculus RIKEN cDNA E130307M08 gene, mRNA (cDNA clone MGC:28784 IMAGE:4488477), complete cds Length = 1538 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 557 catcttcttcctcctcctcc 538
>gb|AC115928.10| Mus musculus chromosome 18, clone RP24-530D22, complete sequence Length = 182777 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 177504 catcttcttcctcctcctcc 177523
>ref|NM_001025387.1| Mus musculus bromodomain containing 2 (Brd2), transcript variant 2, mRNA Length = 4331 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 2859 catcttcttcctcctcctcc 2840
>ref|NM_138651.3| Mus musculus CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2 (Cds2), mRNA Length = 8279 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgcccgccccgccccgcccc 49 |||||||||||||||||||| Sbjct: 3128 tgcccgccccgccccgcccc 3109
>ref|NM_010238.2| Mus musculus bromodomain containing 2 (Brd2), transcript variant 1, mRNA Length = 4239 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 2767 catcttcttcctcctcctcc 2748
>ref|NM_144803.1| Mus musculus cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal) (Chrna2), mRNA Length = 3540 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 1323 catcttcttcctcctcctcc 1304
>gb|AY587020.1| Homo sapiens vitamin K epoxide reductase complex, subunit 1 (VKORC1) gene, complete cds Length = 11190 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 tgcccgccccgccccgcccc 49 |||||||||||||||||||| Sbjct: 6752 tgcccgccccgccccgcccc 6771
>ref|NM_003482.1| Homo sapiens myeloid/lymphoid or mixed-lineage leukemia 2 (MLL2), mRNA Length = 15789 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 3244 catcttcttcctcctcctcc 3225
>gb|AC154675.2| Mus musculus BAC clone RP23-143J5 from chromosome 14, complete sequence Length = 207264 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 gcccgccccgccccgcccca 50 |||||||||||||||||||| Sbjct: 167277 gcccgccccgccccgcccca 167258
>gb|AY574261.1| Mus musculus neuronal nicotinic acetylcholine receptor alpha2 subunit mRNA, complete cds Length = 1539 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 1207 catcttcttcctcctcctcc 1188
>gb|AC164300.3| Mus musculus BAC clone RP23-310J6 from chromosome 8, complete sequence Length = 200605 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 30079 catcttcttcctcctcctcc 30098
>gb|BC032244.1| Homo sapiens REX1, RNA exonuclease 1 homolog (S. cerevisiae), mRNA (cDNA clone MGC:40226 IMAGE:4398472), complete cds Length = 4226 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 41 ccccgccccatcttcttcctcctcctcc 68 |||||||||||| || |||||||||||| Sbjct: 1836 ccccgccccatcctcctcctcctcctcc 1863
>ref|XM_981971.1| PREDICTED: Mus musculus G protein-coupled receptor 165, transcript variant 3 (Gpr165), mRNA Length = 3799 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 2590 catcttcttcctcctcctcc 2571
>ref|XM_895702.2| PREDICTED: Mus musculus G protein-coupled receptor 165, transcript variant 4 (Gpr165), mRNA Length = 3799 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 2590 catcttcttcctcctcctcc 2571
>ref|XM_982599.1| PREDICTED: Mus musculus G protein-coupled receptor 165, transcript variant 8 (Gpr165), mRNA Length = 3694 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 2590 catcttcttcctcctcctcc 2571
>gb|AC124770.4| Mus musculus BAC clone RP23-8J2 from chromosome 18, complete sequence Length = 216754 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 150604 catcttcttcctcctcctcc 150585
>emb|CR974462.5| Mouse DNA sequence from clone RP23-222K15 on chromosome 17, complete sequence Length = 228057 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 207178 catcttcttcctcctcctcc 207197
>emb|CR762404.6| Zebrafish DNA sequence from clone DKEY-204H11 in linkage group 4, complete sequence Length = 180159 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 tgcccgccccgccccgcccc 49 |||||||||||||||||||| Sbjct: 82487 tgcccgccccgccccgcccc 82506
>emb|CT010535.2| Xenopus tropicalis finished cDNA, clone TNeu076f01 Length = 1167 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 461 catcttcttcctcctcctcc 442
>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14 Length = 307550 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 ggcccccgcggtgttcgccg 374 |||||||||||||||||||| Sbjct: 206354 ggcccccgcggtgttcgccg 206335
>emb|CT009719.10| Mouse DNA sequence from clone RP23-65P17 on chromosome 17, complete sequence Length = 205369 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 55233 catcttcttcctcctcctcc 55214
>ref|XM_572215.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNH00210) partial mRNA Length = 795 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ccatcttcttcctcctcctc 67 |||||||||||||||||||| Sbjct: 523 ccatcttcttcctcctcctc 504
>emb|CT025637.1| Pan troglodytes chromosome X clone PTB-011B24 map Xq28, complete sequence Length = 261577 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 110 ttgctttgccagactgcaagtggtggcc 137 |||||||||||| ||||| ||||||||| Sbjct: 152728 ttgctttgccaggctgcatgtggtggcc 152701
>gb|AC126272.3| Mus musculus BAC clone RP23-48P22 from chromosome 14, complete sequence Length = 191606 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 180220 catcttcttcctcctcctcc 180201
>ref|XM_801259.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511425.40) partial mRNA Length = 1974 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 1339 catcttcttcctcctcctcc 1320
>gb|AC009991.5|ATAC009991 Arabidopsis thaliana chromosome III BAC F9F8 genomic sequence, complete sequence Length = 101284 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ccatcttcttcctcctcctc 67 |||||||||||||||||||| Sbjct: 22995 ccatcttcttcctcctcctc 22976
>ref|XM_808008.1| Trypanosoma cruzi strain CL Brener protein kinase domain (Tc00.1047053506519.60) partial mRNA Length = 2577 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 cccatcttcttcctcctcct 66 |||||||||||||||||||| Sbjct: 1806 cccatcttcttcctcctcct 1787
>ref|XM_809008.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506479.10) partial mRNA Length = 1950 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 1327 catcttcttcctcctcctcc 1308
>gb|AC129188.3| Mus musculus BAC clone RP23-446G23 from chromosome 19, complete sequence Length = 175245 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 133998 catcttcttcctcctcctcc 133979
>gb|AC121912.3| Mus musculus BAC clone RP24-183P18 from chromosome 14, complete sequence Length = 198542 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 cccatcttcttcctcctcct 66 |||||||||||||||||||| Sbjct: 5647 cccatcttcttcctcctcct 5666
>ref|XM_537550.2| PREDICTED: Canis familiaris similar to Putative adenylate kinase 7 (LOC480429), mRNA Length = 2360 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 172 catcttcttcctcctcctcc 153
>gb|AC114828.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0038L23, complete sequence Length = 124582 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 119801 catcttcttcctcctcctcc 119782
>gb|AC131711.3| Mus musculus BAC clone RP23-192M18 from 6, complete sequence Length = 228400 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 56580 catcttcttcctcctcctcc 56599
>gb|AY445095.1| Homo sapiens nitric oxide synthase 1 (neuronal) (NOS1) gene, complete cds Length = 152210 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ccatcttcttcctcctcctc 67 |||||||||||||||||||| Sbjct: 50607 ccatcttcttcctcctcctc 50588
>gb|AC084389.1| Mus musculus BAC clone RP23-247A1 from 1, complete sequence Length = 206497 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 62262 catcttcttcctcctcctcc 62281 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 62076 catcttcttcctcctcctcc 62095 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 62055 catcttcttcctcctcctcc 62074
>gb|AC123883.10| Mus musculus chromosome 3, clone RP23-461P7, complete sequence Length = 199554 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 57 tcctcctcctccggcctcgccttcctcccgcc 88 ||||||||||||| | ||||||||||||||| Sbjct: 103594 tcctcctcctccgccgccgccttcctcccgcc 103625
>gb|AY271660.1| Actinomadura madurae maduropeptin biosynthesis gene cluster, partial sequence Length = 11426 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 tcggcggcacggacgccgac 418 |||||||||||||||||||| Sbjct: 131 tcggcggcacggacgccgac 150
>ref|XM_719475.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY04298) partial mRNA Length = 5547 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ccatcttcttcctcctcctc 67 |||||||||||||||||||| Sbjct: 4751 ccatcttcttcctcctcctc 4732
>gb|AC006013.3| Homo sapiens PAC clone RP5-945F2 from 7, complete sequence Length = 159002 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 cccatcttcttcctcctcct 66 |||||||||||||||||||| Sbjct: 83030 cccatcttcttcctcctcct 83049
>emb|CR654774.1|CNS0F470 Tetraodon nigroviridis full-length cDNA Length = 1679 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 gccccatcttcttcctcctcctcc 68 ||||| |||||||||||||||||| Sbjct: 1473 gccccctcttcttcctcctcctcc 1450
>gb|AC136842.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0085C16, complete sequence Length = 156069 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 47992 catcttcttcctcctcctcc 47973
>emb|CR643474.2|CNS0EVH4 Tetraodon nigroviridis full-length cDNA Length = 1650 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 gccccatcttcttcctcctcctcc 68 ||||| |||||||||||||||||| Sbjct: 1461 gccccctcttcttcctcctcctcc 1438
>ref|NM_053504.1| Rattus norvegicus peptidase, serine, 12 (neurotrypsin, motopsin) (Prss12), mRNA Length = 2499 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 tgcccgccccgccccgcccc 49 |||||||||||||||||||| Sbjct: 114 tgcccgccccgccccgcccc 133
>gb|AC146790.16| Medicago truncatula clone mth2-123b21, complete sequence Length = 114449 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ccatcttcttcctcctcctc 67 |||||||||||||||||||| Sbjct: 80471 ccatcttcttcctcctcctc 80452
>gb|AC156564.3| Mus musculus BAC clone RP24-81G20 from chromosome 8, complete sequence Length = 196445 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 63272 catcttcttcctcctcctcc 63291
>gb|AC163276.4| Mus musculus chromosome 19, clone RP24-316F20, complete sequence Length = 169300 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 122039 catcttcttcctcctcctcc 122058
>gb|AY126016.1| Rattus norvegicus homeodomain-leucine zipper protein HOMEZ (Homez) mRNA, complete cds Length = 1542 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 1519 catcttcttcctcctcctcc 1500
>emb|BX323862.18| Zebrafish DNA sequence from clone DKEYP-97A5 in linkage group 6, complete sequence Length = 184810 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 tgcccgccccgccccgcccc 49 |||||||||||||||||||| Sbjct: 40396 tgcccgccccgccccgcccc 40415
>gb|AY341886.1| Rattus norvegicus nin one binding protein mRNA, complete cds Length = 1547 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 591 catcttcttcctcctcctcc 572
>emb|BX842559.3| Human DNA sequence from clone CTD-2183H9 on chromosome X Contains part of the F8 gene for coagulation factor VIII, procoagulant component (hemophilia A), a eukaryotic translation elongation factor 1 alpha 1 (EEF1A1) pseudogene, a zinc finger-like protein 9 (ZPR) pseudogene, the H2AFB gene for H2A histone family member B and the F8A gene for coagulation factor VIII-associated (intronic transcript), complete sequence Length = 68997 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 110 ttgctttgccagactgcaagtggtggcc 137 |||||||||||| ||||| ||||||||| Sbjct: 11022 ttgctttgccaggctgcatgtggtggcc 10995
>emb|AL355861.19| Human DNA sequence from clone RP11-567J24 on chromosome 10 Contains the 5' end of a novel gene, the PRDX3 gene for peroxiredoxin 3 (AOP1, MER5, AOP-1, SP-22), the 5' end of the GPRK5 gene for G protein-coupled receptor kinase 5 (GRK5), a novel gene and four CpG islands, complete sequence Length = 168528 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 132822 catcttcttcctcctcctcc 132841
>gb|AF325345.1| Mus musculus nicotinic acetylcholine receptor alpha 2 subunit mRNA, partial cds Length = 249 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 138 catcttcttcctcctcctcc 119
>gb|AC139206.5| Mus musculus chromosome 1, clone RP23-82P18, complete sequence Length = 304494 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 10240 catcttcttcctcctcctcc 10259
>emb|AL133387.8| Human DNA sequence from clone RP11-107I14 on chromosome 10 Contains the 3' end of a novel gene, three novel genes (FLJ34886), the 5' end of the BTRC gene for beta-transducin repeat containing and four CpG islands, complete sequence Length = 157912 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 46 ccccatcttcttcctcctcctccg 69 ||||||||||||| |||||||||| Sbjct: 4076 ccccatcttcttcttcctcctccg 4099
>emb|AL031963.40|HS40E16 Human DNA sequence from clone RP1-40E16 on chromosome 6p24.1-25.3 Contains the gene for a novel protein similar to D. melanogaster CG5327, a pseudogene similar to serine proteinase inhibitor (SERPINB8), two putative novel genes, the RIPK1 gene for receptor (TNFRSF)-interacting serine-threonine kinase 1, the BPHL gene for biphenyl hydrolase-like protein (serine hydrolase), the gene for a novel protein similar to tubulin beta polypeptide (TUBB), a tubulin beta polypeptide (TUBB) pseudogene, the 3' end of a novel gene and CpG islands, complete sequence Length = 149546 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 tgcccgccccgccccgcccc 49 |||||||||||||||||||| Sbjct: 125557 tgcccgccccgccccgcccc 125576
>gb|AC130651.2| Homo sapiens chromosome 16 clone CTA-972D3, complete sequence Length = 168190 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 65404 catcttcttcctcctcctcc 65423
>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13 Length = 346051 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 ggcccccgcggtgttcgccg 374 |||||||||||||||||||| Sbjct: 294244 ggcccccgcggtgttcgccg 294225
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 cgtgttcggcggcacggacg 413 |||||||||||||||||||| Sbjct: 1417109 cgtgttcggcggcacggacg 1417128
>emb|AL627222.10| Mouse DNA sequence from clone RP23-265A5 on chromosome 11 Contains a novel gene, the Tac4 gene for tachykinin, the Myst2 gene for MYST histone acetyltransferase 2, two novel genes, the 5' end of the gene for the likely ortholog of H. sapiens C/EBP-induced protein (5730593F17Rik) and a CpG island, complete sequence Length = 185645 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 19946 catcttcttcctcctcctcc 19927
>gb|AC109322.16| Homo sapiens chromosome 8, clone CTD-3065J16, complete sequence Length = 215342 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 tgcccgccccgccccgcccc 49 |||||||||||||||||||| Sbjct: 193325 tgcccgccccgccccgcccc 193344
>emb|AL009226.1|MU11KLT Mus musculus DNA sequence from clone 11KLT on chromosome 17. Contains mouse RING3 gene, CpG Island Length = 11493 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 5786 catcttcttcctcctcctcc 5767
>emb|AJ311671.2|RNO311671 Rattus norvegicus partial mRNA for neurotrypsin (nt gene) Length = 2499 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 tgcccgccccgccccgcccc 49 |||||||||||||||||||| Sbjct: 114 tgcccgccccgccccgcccc 133
>gb|AC162692.2| Mus musculus chromosome 1, clone RP23-445K23, complete sequence Length = 181625 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 125425 catcttcttcctcctcctcc 125406
>emb|AL645526.14| Mouse DNA sequence from clone RP23-60F20 on chromosome 11 Contains the 5' end of the Pemt gene for phosphatidylethanolamine N-methyltransferase, the 5' end of the Rai1 gene for retinoic acid induced 1, a novel gene (4930412M03Rik) and three CpG islands, complete sequence Length = 143708 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgcccgccccgccccgcccc 49 |||||||||||||||||||| Sbjct: 95810 tgcccgccccgccccgcccc 95791
>emb|AJ721083.1| Gallus gallus mRNA for hypothetical protein, clone 34j10 Length = 1032 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 846 catcttcttcctcctcctcc 827
>emb|AJ719731.1| Gallus gallus mRNA for hypothetical protein, clone 5m6 Length = 3679 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ccatcttcttcctcctcctc 67 |||||||||||||||||||| Sbjct: 1769 ccatcttcttcctcctcctc 1750
>ref|NM_199086.1| Rattus norvegicus nin one binding protein (Nob1p), mRNA Length = 1547 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 591 catcttcttcctcctcctcc 572
>gb|AC158143.6| Mus musculus chromosome 5, clone RP23-409I5, complete sequence Length = 191873 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ccatcttcttcctcctcctc 67 |||||||||||||||||||| Sbjct: 110719 ccatcttcttcctcctcctc 110738
>gb|AC115889.13| Mus musculus chromosome 3, clone RP24-409N2, complete sequence Length = 166218 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 154346 catcttcttcctcctcctcc 154365
>gb|AC012615.4| Homo sapiens chromosome 19 clone CTB-31O20, complete sequence Length = 149252 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 41 ccccgccccatcttcttcctcctcctcc 68 |||||||||||| || |||||||||||| Sbjct: 19505 ccccgccccatcctcctcctcctcctcc 19478
>dbj|AK220444.1| Mus musculus mRNA for mKIAA4005 protein Length = 3625 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 2180 catcttcttcctcctcctcc 2161
>gb|DQ026303.1| Tupaia belangeri 17-beta-hydroxysteroid dehydrogenase type 1 (HSD17B1) gene, complete cds Length = 5713 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgcccgccccgccccgcccc 49 |||||||||||||||||||| Sbjct: 3522 tgcccgccccgccccgcccc 3503
>gb|AC123512.4| Homo sapiens 12 BAC RP11-24B21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 86706 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 gaaaggtagatcagataggt 183 |||||||||||||||||||| Sbjct: 37860 gaaaggtagatcagataggt 37841
>dbj|AK096698.1| Homo sapiens cDNA FLJ39379 fis, clone PERIC2000386 Length = 2553 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 46 ccccatcttcttcctcctcctccg 69 ||||||||||||| |||||||||| Sbjct: 1362 ccccatcttcttcttcctcctccg 1385
>gb|AC023494.31| Homo sapiens 3 BAC RP11-59M4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 57963 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 cccgccccgccccgccccat 51 |||||||||||||||||||| Sbjct: 21496 cccgccccgccccgccccat 21515
>gb|AC090434.43| Chlamydomonas reinhardtii clone cr-1j6, complete sequence Length = 127686 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 cccgccccgccccgccccat 51 |||||||||||||||||||| Sbjct: 82553 cccgccccgccccgccccat 82572
>gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 genomic sequence, complete sequence Length = 152172 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 110508 catcttcttcctcctcctcc 110527
>dbj|AP003923.1| Mus musculus genomic DNA, chromosome 2, clone:B478c13, complete sequence Length = 171634 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cccgccccgccccgccccat 51 |||||||||||||||||||| Sbjct: 1648 cccgccccgccccgccccat 1629
>dbj|AK140919.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130070F19 product:unclassifiable, full insert sequence Length = 2109 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgcccgccccgccccgcccc 49 |||||||||||||||||||| Sbjct: 670 tgcccgccccgccccgcccc 651
>gb|AY081740.1| Arabidopsis thaliana AT5g41810/K16L22_9 mRNA, complete cds Length = 867 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 tcttcttcctcctcctccgg 70 |||||||||||||||||||| Sbjct: 553 tcttcttcctcctcctccgg 572
>gb|AC093829.2| Homo sapiens BAC clone RP11-401E5 from 4, complete sequence Length = 169483 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 86589 catcttcttcctcctcctcc 86608
>dbj|AK146973.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920080K13 product:hypothetical Mov34-1/Mov34/MPN/PAD-1/Glycine-rich region profile containing protein, full insert sequence Length = 1555 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 593 catcttcttcctcctcctcc 574
>dbj|AK160356.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130307M08 product:hypothetical Mov34-1/Mov34/MPN/PAD-1 containing protein, full insert sequence Length = 1662 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 577 catcttcttcctcctcctcc 558
>dbj|AK147541.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1068N01 product:CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2, full insert sequence Length = 8279 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgcccgccccgccccgcccc 49 |||||||||||||||||||| Sbjct: 3128 tgcccgccccgccccgcccc 3109
>dbj|AK158970.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K530022D01 product:bromodomain containing 2, full insert sequence Length = 4475 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 3033 catcttcttcctcctcctcc 3014
>gb|AC024301.10| Homo sapiens, clone RP11-686O16, complete sequence Length = 195269 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ccccgccccatcttcttcct 60 |||||||||||||||||||| Sbjct: 121263 ccccgccccatcttcttcct 121244
>gb|AC163771.5| Pan troglodytes BAC clone CH251-57G17 from chromosome unknown, complete sequence Length = 179603 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 110 ttgctttgccagactgcaagtggtggcc 137 |||||||||||| ||||| ||||||||| Sbjct: 119575 ttgctttgccaggctgcatgtggtggcc 119602
>dbj|AK168525.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920029G19 product:bromodomain containing 2, full insert sequence Length = 4352 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 2904 catcttcttcctcctcctcc 2885
>dbj|AK168423.1| Mus musculus 16 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920015J10 product:bromodomain containing 2, full insert sequence Length = 2444 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 2291 catcttcttcctcctcctcc 2272
>emb|CR382287.6| Human DNA sequence from clone bP-21216K13 on chromosome 21, complete sequence Length = 278310 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 41 ccccgccccatcttcttcctcctcctcc 68 |||| |||| |||||||||||||||||| Sbjct: 239820 cccctccccctcttcttcctcctcctcc 239793
>emb|BX908772.11| Zebrafish DNA sequence from clone DKEY-207H9 in linkage group 18, complete sequence Length = 173801 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgcccgccccgccccgcccc 49 |||||||||||||||||||| Sbjct: 47566 tgcccgccccgccccgcccc 47547
>dbj|AK166001.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730028N20 product:CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2, full insert sequence Length = 3810 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgcccgccccgccccgcccc 49 |||||||||||||||||||| Sbjct: 3087 tgcccgccccgccccgcccc 3068
>gb|AC155654.16| Mus musculus 6 BAC RP24-192P21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 147486 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 67321 catcttcttcctcctcctcc 67340
>dbj|AK172381.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830205F23 product:hypothetical Mov34-1/Mov34/MPN/PAD-1 containing protein, full insert sequence Length = 1313 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 351 catcttcttcctcctcctcc 332
>gb|AC069158.6| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0049O12, from chromosome 2, complete sequence Length = 155154 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 33 ccgccccgccccgccccatcttcttcctcctcctcc 68 |||||||||||| ||||||| || ||| |||||||| Sbjct: 114673 ccgccccgcccctccccatcctcctccccctcctcc 114638
>emb|CR390137.1| Gallus gallus finished cDNA, clone ChEST163o7 Length = 641 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 469 catcttcttcctcctcctcc 450
>gb|AC161867.6| Mus musculus chromosome 8, clone RP24-281E22, complete sequence Length = 180410 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 35654 catcttcttcctcctcctcc 35673
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ccgccccgccccgccccatc 52 |||||||||||||||||||| Sbjct: 2635053 ccgccccgccccgccccatc 2635072
>dbj|AK036328.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630058F14 product:PHOSPHATIDATE CYTIDYLYLTRANSFERASE 2 (EC 2.7.7.41) (CDP-DIGLYCERIDE SYNTHETASE 2) (CDP-DIGLYCERIDE PYROPHOSPHORYLASE 2) (CDP- DIACYLGLYCEROL SYNTHASE 2) (CDS 2) (CTP:PHOSPHATIDATE CYTIDYLYLTRANSFERASE 2) (CDP-DAG SYNTHASE 2) (CDP-DG SYNTHETASE 2) homolog [Homo sapiens], full insert sequence Length = 3890 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgcccgccccgccccgcccc 49 |||||||||||||||||||| Sbjct: 3087 tgcccgccccgccccgcccc 3068
>gb|AC155923.2| Mus musculus BAC clone RP24-488E11 from chromosome 9, complete sequence Length = 134932 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 cccgccccgccccgccccat 51 |||||||||||||||||||| Sbjct: 40065 cccgccccgccccgccccat 40046
>gb|AC154729.2| Mus musculus BAC clone RP24-377H17 from chromosome 14, complete sequence Length = 150383 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 31749 catcttcttcctcctcctcc 31768
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 cctcctccggcctcgccttc 80 |||||||||||||||||||| Sbjct: 4917719 cctcctccggcctcgccttc 4917738
>gb|AY039907.1| Arabidopsis thaliana AT5g41810/K16L22_9 mRNA, complete cds Length = 1194 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 tcttcttcctcctcctccgg 70 |||||||||||||||||||| Sbjct: 773 tcttcttcctcctcctccgg 792
>dbj|AK034608.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430014J01 product:unclassifiable, full insert sequence Length = 2371 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 1794 catcttcttcctcctcctcc 1775
>dbj|AK042723.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730018P10 product:hypothetical Rhodopsin-like GPCR superfamily/G-protein coupled receptors family 1 profile containing protein, full insert sequence Length = 2558 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 1962 catcttcttcctcctcctcc 1943
>dbj|AK038566.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230043H19 product:hypothetical Rhodopsin-like GPCR superfamily/G-protein coupled receptors family 1 profile containing protein, full insert sequence Length = 3015 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 1862 catcttcttcctcctcctcc 1843
>dbj|AK034479.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330198I07 product:hypothetical Rhodopsin-like GPCR superfamily/G-protein coupled receptors family 1 profile containing protein, full insert sequence Length = 3138 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 1929 catcttcttcctcctcctcc 1910
>dbj|AK012128.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610511M14 product:hypothetical Mov34 family containing protein, full insert sequence Length = 1529 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 563 catcttcttcctcctcctcc 544
>gb|BC085251.1| Mus musculus bromodomain containing 2, mRNA (cDNA clone IMAGE:5354747) Length = 3216 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 3055 catcttcttcctcctcctcc 3036
>dbj|AK053309.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130009C14 product:BCL-6 COREPRESSOR SHORT ISOFORM homolog [Homo sapiens], full insert sequence Length = 3611 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 gcccgccccgccccgcccca 50 |||||||||||||||||||| Sbjct: 413 gcccgccccgccccgcccca 432
>gb|AC153923.4| Mus musculus 6 BAC RP23-82I13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 248275 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 gcccgccccgccccgcccca 50 |||||||||||||||||||| Sbjct: 210656 gcccgccccgccccgcccca 210675
>dbj|AK030040.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932416K20 product:hypothetical protein, full insert sequence Length = 3561 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 571 catcttcttcctcctcctcc 552
>gb|AC067801.4|AC067801 Homo sapiens chromosome 18, clone RP11-583B12, complete sequence Length = 174938 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ccccgccccatcttcttcct 60 |||||||||||||||||||| Sbjct: 104863 ccccgccccatcttcttcct 104844
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 ctccggcctcgccttcctcc 84 |||||||||||||||||||| Sbjct: 23113892 ctccggcctcgccttcctcc 23113911
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 22009996 catcttcttcctcctcctcc 22009977
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 19265873 catcttcttcctcctcctcc 19265854
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 37 cccgccccgccccatcttcttcctcctcctcc 68 |||||| |||||| ||||| |||||||||||| Sbjct: 17044563 cccgccacgccccttcttcctcctcctcctcc 17044594
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ccatcttcttcctcctcctc 67 |||||||||||||||||||| Sbjct: 27385528 ccatcttcttcctcctcctc 27385547
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 27659643 catcttcttcctcctcctcc 27659624
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 51 tcttcttcctcctcctccggcctc 74 |||||||||||||||||| ||||| Sbjct: 24557768 tcttcttcctcctcctcctgcctc 24557745
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 33 ccgccccgccccgccccatcttcttcctcctcctcc 68 |||||||||||| ||||||| || ||| |||||||| Sbjct: 34390433 ccgccccgcccctccccatcctcctccccctcctcc 34390468
>gb|AC007494.8| Homo sapiens chromosome 16 clone RP11-329J18, complete sequence Length = 206262 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgcccgccccgccccgcccc 49 |||||||||||||||||||| Sbjct: 145434 tgcccgccccgccccgcccc 145415
>emb|BX825899.1|CNS0A6F6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL70ZG09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1104 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ccatcttcttcctcctcctc 67 |||||||||||||||||||| Sbjct: 925 ccatcttcttcctcctcctc 906
>gb|AF318183.1|AF318183 Mus musculus ring 3 mRNA, partial cds Length = 2206 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 2195 catcttcttcctcctcctcc 2176
>gb|AC154785.2| Mus musculus BAC clone RP23-92M20 from chromosome 12, complete sequence Length = 231183 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 158226 catcttcttcctcctcctcc 158207
>gb|AC154535.2| Mus musculus BAC clone RP23-447M9 from chromosome 13, complete sequence Length = 179176 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 24536 catcttcttcctcctcctcc 24555
>dbj|AB212273.1| Mus musculus Brd2 mRNA for bromodomain-containing Brd2 protein, complete cds Length = 2336 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 1367 catcttcttcctcctcctcc 1348
>ref|NM_001016525.1| Xenopus tropicalis hypothetical protein LOC549279 (LOC549279), mRNA Length = 1473 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctccggcc 72 ||||||| |||||||||||||||| Sbjct: 133 catcttcctcctcctcctccggcc 110
>gb|AC073395.6|AC073395 Arabidopsis thaliana chromosome 3 BAC F11B9 genomic sequence, complete sequence Length = 103517 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ccatcttcttcctcctcctc 67 |||||||||||||||||||| Sbjct: 30285 ccatcttcttcctcctcctc 30304
>gb|AF252388.1|AF252388 Macaca mulatta cyclophilin mRNA, partial cds Length = 473 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 tcttcttcctcctcctccgg 70 |||||||||||||||||||| Sbjct: 1 tcttcttcctcctcctccgg 20
>gb|AC122297.4| Mus musculus BAC clone RP23-266D1 from chromosome 6, complete sequence Length = 170005 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 6531 catcttcttcctcctcctcc 6512
>gb|AC019102.13| Homo sapiens BAC clone RP11-457A20 from 2, complete sequence Length = 158242 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 80099 catcttcttcctcctcctcc 80118
>gb|BT005331.1| Arabidopsis thaliana At3g11150 mRNA, complete cds Length = 1116 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ccatcttcttcctcctcctc 67 |||||||||||||||||||| Sbjct: 983 ccatcttcttcctcctcctc 964
>gb|AC116956.2| Dictyostelium discoideum chromosome 2 map 1418423-1684967 strain AX4, complete sequence Length = 266544 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 132681 catcttcttcctcctcctcc 132662
>gb|AC135050.3| Homo sapiens chromosome 16 clone RP11-196G11, complete sequence Length = 182230 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgcccgccccgccccgcccc 49 |||||||||||||||||||| Sbjct: 149167 tgcccgccccgccccgcccc 149148
>gb|AC011603.37| Homo sapiens 12 BAC RP11-386G11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174400 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 110197 catcttcttcctcctcctcc 110178
>gb|AC098806.3| Takifugu rubripes clone 208D11, complete sequence Length = 130460 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 66154 catcttcttcctcctcctcc 66173
>gb|AC068799.14| Homo sapiens 12 BAC RP11-331O1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170249 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ccatcttcttcctcctcctc 67 |||||||||||||||||||| Sbjct: 69993 ccatcttcttcctcctcctc 69974
>ref|XM_224525.3| PREDICTED: Rattus norvegicus similar to heparan sulfate 6-sulfotransferase 3 (LOC306170), mRNA Length = 1599 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 tcttcttcctcctcctccgg 70 |||||||||||||||||||| Sbjct: 1070 tcttcttcctcctcctccgg 1051
>ref|XM_573625.1| PREDICTED: Rattus norvegicus similar to High mobility group protein 2 (HMG-2) (LOC498388), mRNA Length = 1061 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ccatcttcttcctcctcctc 67 |||||||||||||||||||| Sbjct: 665 ccatcttcttcctcctcctc 646
>ref|XM_573272.1| PREDICTED: Rattus norvegicus similar to High mobility group protein 2 (HMG-2) (LOC498072), mRNA Length = 1092 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 catcttcttcctcctcctcc 68 |||||||||||||||||||| Sbjct: 690 catcttcttcctcctcctcc 671
>gb|AY085079.1| Arabidopsis thaliana clone 126660 mRNA, complete sequence Length = 1148 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 tcttcttcctcctcctccgg 70 |||||||||||||||||||| Sbjct: 686 tcttcttcctcctcctccgg 705 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,969,095 Number of Sequences: 3902068 Number of extensions: 3969095 Number of successful extensions: 199193 Number of sequences better than 10.0: 350 Number of HSP's better than 10.0 without gapping: 351 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 195083 Number of HSP's gapped (non-prelim): 4091 length of query: 436 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 414 effective length of database: 17,147,199,772 effective search space: 7098940705608 effective search space used: 7098940705608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
