ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl26a10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_184033.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2403 Score = 240 bits (121), Expect = 3e-60 Identities = 202/229 (88%) Strand = Plus / Plus Query: 209 gacctggcgcagctctccactgccatctcggcgggggaggacctgggcccgtttgtccgg 268 ||||| |||||||||||||| |||||| | || |||||||||||||||||||| || ||| Sbjct: 55 gacctcgcgcagctctccaccgccatcgccgccggggaggacctgggcccgttcgtgcgg 114 Query: 269 cgcgcgttcgcctgcggccggccggagccgcttctatcctcgctccgcgccgtcgcgcga 328 ||||||||||| ||||| || || |||||||| || |||||||||| || | ||||| Sbjct: 115 cgcgcgttcgcgtgcgggcgccccgagccgctgctcgcctcgctccgggcggcggcgcgg 174 Query: 329 gaccgcgagtccgagatcgaggagctctgtcgcgcgcatttccacgacttcatccgcgcc 388 ||||| ||| ||||||||||||||||||| ||||| || ||||||||||||||||||||| Sbjct: 175 gaccgggaggccgagatcgaggagctctgccgcgcccacttccacgacttcatccgcgcc 234 Query: 389 gtcgacgacctccgctctctcctcgccgacgccgatgtgctcaagggct 437 ||||||||||||||||| ||||||||||||||||| | ||||||||||| Sbjct: 235 gtcgacgacctccgctccctcctcgccgacgccgacgcgctcaagggct 283
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 240 bits (121), Expect = 3e-60 Identities = 202/229 (88%) Strand = Plus / Plus Query: 209 gacctggcgcagctctccactgccatctcggcgggggaggacctgggcccgtttgtccgg 268 ||||| |||||||||||||| |||||| | || |||||||||||||||||||| || ||| Sbjct: 14042602 gacctcgcgcagctctccaccgccatcgccgccggggaggacctgggcccgttcgtgcgg 14042661 Query: 269 cgcgcgttcgcctgcggccggccggagccgcttctatcctcgctccgcgccgtcgcgcga 328 ||||||||||| ||||| || || |||||||| || |||||||||| || | ||||| Sbjct: 14042662 cgcgcgttcgcgtgcgggcgccccgagccgctgctcgcctcgctccgggcggcggcgcgg 14042721 Query: 329 gaccgcgagtccgagatcgaggagctctgtcgcgcgcatttccacgacttcatccgcgcc 388 ||||| ||| ||||||||||||||||||| ||||| || ||||||||||||||||||||| Sbjct: 14042722 gaccgggaggccgagatcgaggagctctgccgcgcccacttccacgacttcatccgcgcc 14042781 Query: 389 gtcgacgacctccgctctctcctcgccgacgccgatgtgctcaagggct 437 ||||||||||||||||| ||||||||||||||||| | ||||||||||| Sbjct: 14042782 gtcgacgacctccgctccctcctcgccgacgccgacgcgctcaagggct 14042830 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 gcggcgcaagctcgccggcga 159 ||||||||||||||||||||| Sbjct: 15233800 gcggcgcaagctcgccggcga 15233820 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 gcggcgcaagctcgccggcga 159 ||||||||||||||||||||| Sbjct: 15225363 gcggcgcaagctcgccggcga 15225383 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 gcggcgcaagctcgccggcga 159 ||||||||||||||||||||| Sbjct: 15224032 gcggcgcaagctcgccggcga 15224052 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 397 cctccgctctctcctcgccgacgccgat 424 ||||||| |||||||| ||||||||||| Sbjct: 41969979 cctccgcgctctcctccccgacgccgat 41969952 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 15220892 cggcgcaagctcgccggcga 15220873 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 12499230 cggcgcaagctcgccggcga 12499249
>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1051E10 Length = 207782 Score = 240 bits (121), Expect = 3e-60 Identities = 202/229 (88%) Strand = Plus / Plus Query: 209 gacctggcgcagctctccactgccatctcggcgggggaggacctgggcccgtttgtccgg 268 ||||| |||||||||||||| |||||| | || |||||||||||||||||||| || ||| Sbjct: 202904 gacctcgcgcagctctccaccgccatcgccgccggggaggacctgggcccgttcgtgcgg 202963 Query: 269 cgcgcgttcgcctgcggccggccggagccgcttctatcctcgctccgcgccgtcgcgcga 328 ||||||||||| ||||| || || |||||||| || |||||||||| || | ||||| Sbjct: 202964 cgcgcgttcgcgtgcgggcgccccgagccgctgctcgcctcgctccgggcggcggcgcgg 203023 Query: 329 gaccgcgagtccgagatcgaggagctctgtcgcgcgcatttccacgacttcatccgcgcc 388 ||||| ||| ||||||||||||||||||| ||||| || ||||||||||||||||||||| Sbjct: 203024 gaccgggaggccgagatcgaggagctctgccgcgcccacttccacgacttcatccgcgcc 203083 Query: 389 gtcgacgacctccgctctctcctcgccgacgccgatgtgctcaagggct 437 ||||||||||||||||| ||||||||||||||||| | ||||||||||| Sbjct: 203084 gtcgacgacctccgctccctcctcgccgacgccgacgcgctcaagggct 203132
>dbj|AP003258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0463A02 Length = 151041 Score = 240 bits (121), Expect = 3e-60 Identities = 202/229 (88%) Strand = Plus / Plus Query: 209 gacctggcgcagctctccactgccatctcggcgggggaggacctgggcccgtttgtccgg 268 ||||| |||||||||||||| |||||| | || |||||||||||||||||||| || ||| Sbjct: 118347 gacctcgcgcagctctccaccgccatcgccgccggggaggacctgggcccgttcgtgcgg 118406 Query: 269 cgcgcgttcgcctgcggccggccggagccgcttctatcctcgctccgcgccgtcgcgcga 328 ||||||||||| ||||| || || |||||||| || |||||||||| || | ||||| Sbjct: 118407 cgcgcgttcgcgtgcgggcgccccgagccgctgctcgcctcgctccgggcggcggcgcgg 118466 Query: 329 gaccgcgagtccgagatcgaggagctctgtcgcgcgcatttccacgacttcatccgcgcc 388 ||||| ||| ||||||||||||||||||| ||||| || ||||||||||||||||||||| Sbjct: 118467 gaccgggaggccgagatcgaggagctctgccgcgcccacttccacgacttcatccgcgcc 118526 Query: 389 gtcgacgacctccgctctctcctcgccgacgccgatgtgctcaagggct 437 ||||||||||||||||| ||||||||||||||||| | ||||||||||| Sbjct: 118527 gtcgacgacctccgctccctcctcgccgacgccgacgcgctcaagggct 118575
>dbj|AK102963.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115I11, full insert sequence Length = 3046 Score = 240 bits (121), Expect = 3e-60 Identities = 202/229 (88%) Strand = Plus / Plus Query: 209 gacctggcgcagctctccactgccatctcggcgggggaggacctgggcccgtttgtccgg 268 ||||| |||||||||||||| |||||| | || |||||||||||||||||||| || ||| Sbjct: 126 gacctcgcgcagctctccaccgccatcgccgccggggaggacctgggcccgttcgtgcgg 185 Query: 269 cgcgcgttcgcctgcggccggccggagccgcttctatcctcgctccgcgccgtcgcgcga 328 ||||||||||| ||||| || || |||||||| || |||||||||| || | ||||| Sbjct: 186 cgcgcgttcgcgtgcgggcgccccgagccgctgctcgcctcgctccgggcggcggcgcgg 245 Query: 329 gaccgcgagtccgagatcgaggagctctgtcgcgcgcatttccacgacttcatccgcgcc 388 ||||| ||| ||||||||||||||||||| ||||| || ||||||||||||||||||||| Sbjct: 246 gaccgggaggccgagatcgaggagctctgccgcgcccacttccacgacttcatccgcgcc 305 Query: 389 gtcgacgacctccgctctctcctcgccgacgccgatgtgctcaagggct 437 ||||||||||||||||| ||||||||||||||||| | ||||||||||| Sbjct: 306 gtcgacgacctccgctccctcctcgccgacgccgacgcgctcaagggct 354
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 168 bits (85), Expect = 1e-38 Identities = 193/229 (84%) Strand = Plus / Plus Query: 209 gacctggcgcagctctccactgccatctcggcgggggaggacctgggcccgtttgtccgg 268 ||||| || |||||||||| |||||| | || |||||||||||||||||||| || ||| Sbjct: 18962939 gacctcgcccagctctccatcgccatcaccgccggggaggacctgggcccgttagtgcgg 18962998 Query: 269 cgcgcgttcgcctgcggccggccggagccgcttctatcctcgctccgcgccgtcgcgcga 328 |||| |||| | ||| | | || ||||| || || |||||||| | |||| ||||| Sbjct: 18962999 cgcgtgttcacgtgcaggtgccccgagccactactcgcctcgctctgggccgcggcgcgg 18963058 Query: 329 gaccgcgagtccgagatcgaggagctctgtcgcgcgcatttccacgacttcatccgcgcc 388 ||||| ||| ||||||||||||||||||| |||||||| ||||||||||||||| ||||| Sbjct: 18963059 gaccgggagaccgagatcgaggagctctgccgcgcgcacttccacgacttcatctgcgcc 18963118 Query: 389 gtcgacgacctccgctctctcctcgccgacgccgatgtgctcaagggct 437 | ||| |||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 18963119 attgacaacctccgctccctcctcgccgacgccgatgcgctcaagggct 18963167 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 8506113 cggcgcaagctcgccggcga 8506094
>dbj|AP003684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485D10 Length = 147464 Score = 168 bits (85), Expect = 1e-38 Identities = 193/229 (84%) Strand = Plus / Plus Query: 209 gacctggcgcagctctccactgccatctcggcgggggaggacctgggcccgtttgtccgg 268 ||||| || |||||||||| |||||| | || |||||||||||||||||||| || ||| Sbjct: 128504 gacctcgcccagctctccatcgccatcaccgccggggaggacctgggcccgttagtgcgg 128563 Query: 269 cgcgcgttcgcctgcggccggccggagccgcttctatcctcgctccgcgccgtcgcgcga 328 |||| |||| | ||| | | || ||||| || || |||||||| | |||| ||||| Sbjct: 128564 cgcgtgttcacgtgcaggtgccccgagccactactcgcctcgctctgggccgcggcgcgg 128623 Query: 329 gaccgcgagtccgagatcgaggagctctgtcgcgcgcatttccacgacttcatccgcgcc 388 ||||| ||| ||||||||||||||||||| |||||||| ||||||||||||||| ||||| Sbjct: 128624 gaccgggagaccgagatcgaggagctctgccgcgcgcacttccacgacttcatctgcgcc 128683 Query: 389 gtcgacgacctccgctctctcctcgccgacgccgatgtgctcaagggct 437 | ||| |||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 128684 attgacaacctccgctccctcctcgccgacgccgatgcgctcaagggct 128732
>dbj|AP004730.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0009J19 Length = 156988 Score = 168 bits (85), Expect = 1e-38 Identities = 193/229 (84%) Strand = Plus / Plus Query: 209 gacctggcgcagctctccactgccatctcggcgggggaggacctgggcccgtttgtccgg 268 ||||| || |||||||||| |||||| | || |||||||||||||||||||| || ||| Sbjct: 55609 gacctcgcccagctctccatcgccatcaccgccggggaggacctgggcccgttagtgcgg 55668 Query: 269 cgcgcgttcgcctgcggccggccggagccgcttctatcctcgctccgcgccgtcgcgcga 328 |||| |||| | ||| | | || ||||| || || |||||||| | |||| ||||| Sbjct: 55669 cgcgtgttcacgtgcaggtgccccgagccactactcgcctcgctctgggccgcggcgcgg 55728 Query: 329 gaccgcgagtccgagatcgaggagctctgtcgcgcgcatttccacgacttcatccgcgcc 388 ||||| ||| ||||||||||||||||||| |||||||| ||||||||||||||| ||||| Sbjct: 55729 gaccgggagaccgagatcgaggagctctgccgcgcgcacttccacgacttcatctgcgcc 55788 Query: 389 gtcgacgacctccgctctctcctcgccgacgccgatgtgctcaagggct 437 | ||| |||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 55789 attgacaacctccgctccctcctcgccgacgccgatgcgctcaagggct 55837
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 73.8 bits (37), Expect = 4e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 209 gacctggcgcagctctccactgccatctcggcgggggaggacctgggcccgtttgtccgg 268 ||||| || |||||||||| |||||| | || |||||||||||||||||||| || ||| Sbjct: 25770089 gacctcgcccagctctccatcgccatcgccgctggggaggacctgggcccgttcgtgcgg 25770148 Query: 269 cgcgcgttcgcctgcggccggccggagccgcttctatcctcgctc 313 ||| ||||||| ||||| || || |||||||| || |||||||| Sbjct: 25770149 cgcacgttcgcgtgcgggcgccccgagccgctgctcgcctcgctc 25770193 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 gcggcgcaagctcgccggcga 159 ||||||||||||||||||||| Sbjct: 14361185 gcggcgcaagctcgccggcga 14361165 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 9146047 cggcgcaagctcgccggcga 9146028 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 8936326 cggcgcaagctcgccggcga 8936307 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 7862777 cggcgcaagctcgccggcga 7862796
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 73.8 bits (37), Expect = 4e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 209 gacctggcgcagctctccactgccatctcggcgggggaggacctgggcccgtttgtccgg 268 ||||| || |||||||||| |||||| | || |||||||||||||||||||| || ||| Sbjct: 25698265 gacctcgcccagctctccatcgccatcgccgctggggaggacctgggcccgttcgtgcgg 25698324 Query: 269 cgcgcgttcgcctgcggccggccggagccgcttctatcctcgctc 313 ||| ||||||| ||||| || || |||||||| || |||||||| Sbjct: 25698325 cgcacgttcgcgtgcgggcgccccgagccgctgctcgcctcgctc 25698369 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 gcggcgcaagctcgccggcga 159 ||||||||||||||||||||| Sbjct: 14315467 gcggcgcaagctcgccggcga 14315447 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 9145932 cggcgcaagctcgccggcga 9145913 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 8936209 cggcgcaagctcgccggcga 8936190 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 7862658 cggcgcaagctcgccggcga 7862677
>emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa0002L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 167131 Score = 73.8 bits (37), Expect = 4e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 209 gacctggcgcagctctccactgccatctcggcgggggaggacctgggcccgtttgtccgg 268 ||||| || |||||||||| |||||| | || |||||||||||||||||||| || ||| Sbjct: 137327 gacctcgcccagctctccatcgccatcgccgctggggaggacctgggcccgttcgtgcgg 137386 Query: 269 cgcgcgttcgcctgcggccggccggagccgcttctatcctcgctc 313 ||| ||||||| ||||| || || |||||||| || |||||||| Sbjct: 137387 cgcacgttcgcgtgcgggcgccccgagccgctgctcgcctcgctc 137431
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 142 gcgcaagctcgccggcgacgcg 163 |||||||||||||||||||||| Sbjct: 773512 gcgcaagctcgccggcgacgcg 773491
>gb|AC079843.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0013J21, complete sequence Length = 155290 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 gcggcgcaagctcgccggcga 159 ||||||||||||||||||||| Sbjct: 78400 gcggcgcaagctcgccggcga 78420
>gb|AC137003.3| Oryza sativa (japonica cultivar-group) Chromosome 5 BAC clone OSJNBb0069G11, complete sequence Length = 174844 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 gcggcgcaagctcgccggcga 159 ||||||||||||||||||||| Sbjct: 127285 gcggcgcaagctcgccggcga 127305
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 410 ctcgccgacgccgatgtgctc 430 ||||||||||||||||||||| Sbjct: 1776779 ctcgccgacgccgatgtgctc 1776759
>gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0016G07, complete sequence Length = 123167 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 gcggcgcaagctcgccggcga 159 ||||||||||||||||||||| Sbjct: 58283 gcggcgcaagctcgccggcga 58303
>gb|AC136523.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0018C06, complete sequence Length = 179695 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 gcggcgcaagctcgccggcga 159 ||||||||||||||||||||| Sbjct: 59820 gcggcgcaagctcgccggcga 59800
>emb|AL365366.20| Human DNA sequence from clone RP11-553N16 on chromosome 1 Contains the 3' end of the gene for a novel protein (FLJ16613), a ribosomal protein L6 (RPL6) pseudogene, the EXO1 gene for exonuclease 1, the 5' end of a ribosomal protein L23a (RPL23a) pseudogene and a CpG island, complete sequence Length = 143967 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 102 cccctctcccacaaccccacctcct 126 ||||||||||||| ||||||||||| Sbjct: 52486 cccctctcccacatccccacctcct 52462
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 gcggcgcaagctcgccggcga 159 ||||||||||||||||||||| Sbjct: 2100260 gcggcgcaagctcgccggcga 2100280 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 6178 cggcgcaagctcgccggcga 6197
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 410 ctcgccgacgccgatgtgctc 430 ||||||||||||||||||||| Sbjct: 3112079 ctcgccgacgccgatgtgctc 3112059
>emb|AL662959.3|OSJN00160 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019G23, complete sequence Length = 150305 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 gcggcgcaagctcgccggcga 159 ||||||||||||||||||||| Sbjct: 33417 gcggcgcaagctcgccggcga 33437
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 tgcggcgcaagctcgccggcg 158 ||||||||||||||||||||| Sbjct: 3388740 tgcggcgcaagctcgccggcg 3388760 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 138 tgcggcgcaagctcgccggcg 158 ||||||||||||||||||||| Sbjct: 3372019 tgcggcgcaagctcgccggcg 3371999
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 410 ctcgccgacgccgatgtgctc 430 ||||||||||||||||||||| Sbjct: 2259804 ctcgccgacgccgatgtgctc 2259784
>emb|BX649377.8| Zebrafish DNA sequence from clone CH211-196J1 in linkage group 19, complete sequence Length = 217898 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 122 ctcctccagatctcgatgcgg 142 ||||||||||||||||||||| Sbjct: 202832 ctcctccagatctcgatgcgg 202812
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 gcggcgcaagctcgccggcga 159 ||||||||||||||||||||| Sbjct: 4405685 gcggcgcaagctcgccggcga 4405705 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 3999378 cggcgcaagctcgccggcga 3999359 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 3218799 cggcgcaagctcgccggcga 3218780
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 gcggcgcaagctcgccggcga 159 ||||||||||||||||||||| Sbjct: 2100260 gcggcgcaagctcgccggcga 2100280 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 6178 cggcgcaagctcgccggcga 6197
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 gcggcgcaagctcgccggcga 159 ||||||||||||||||||||| Sbjct: 17870730 gcggcgcaagctcgccggcga 17870710 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 gcggcgcaagctcgccggcga 159 ||||||||||||||||||||| Sbjct: 17863148 gcggcgcaagctcgccggcga 17863128 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 cgcctgcggccggccggagc 296 |||||||||||||||||||| Sbjct: 21297988 cgcctgcggccggccggagc 21298007 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 9839844 cggcgcaagctcgccggcga 9839863
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 gcggcgcaagctcgccggcga 159 ||||||||||||||||||||| Sbjct: 11977006 gcggcgcaagctcgccggcga 11976986 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 gcggcgcaagctcgccggcga 159 ||||||||||||||||||||| Sbjct: 10510469 gcggcgcaagctcgccggcga 10510489 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 gcggcgcaagctcgccggcga 159 ||||||||||||||||||||| Sbjct: 6687121 gcggcgcaagctcgccggcga 6687141 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 407 ctcctcgccgacgccgatgtgctc 430 ||||||||||||||||| |||||| Sbjct: 28259668 ctcctcgccgacgccgacgtgctc 28259645 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 ccgcgccgtcgacgacctcc 401 |||||||||||||||||||| Sbjct: 23138335 ccgcgccgtcgacgacctcc 23138354
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 gcggcgcaagctcgccggcga 159 ||||||||||||||||||||| Sbjct: 5090882 gcggcgcaagctcgccggcga 5090902 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cctgcccaactcggcaactc 102 |||||||||||||||||||| Sbjct: 24501105 cctgcccaactcggcaactc 24501124 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 ccgcgccgtcgacgacctcc 401 |||||||||||||||||||| Sbjct: 1276936 ccgcgccgtcgacgacctcc 1276955
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 145 caagctcgccggcgacgcgcc 165 ||||||||||||||||||||| Sbjct: 2057689 caagctcgccggcgacgcgcc 2057709
>dbj|AP004348.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0683C09 Length = 185139 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 gcggcgcaagctcgccggcga 159 ||||||||||||||||||||| Sbjct: 97722 gcggcgcaagctcgccggcga 97702 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 gcggcgcaagctcgccggcga 159 ||||||||||||||||||||| Sbjct: 90140 gcggcgcaagctcgccggcga 90120
>dbj|AP002914.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0493G01 Length = 167587 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 gcggcgcaagctcgccggcga 159 ||||||||||||||||||||| Sbjct: 87173 gcggcgcaagctcgccggcga 87193 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 gcggcgcaagctcgccggcga 159 ||||||||||||||||||||| Sbjct: 78736 gcggcgcaagctcgccggcga 78756 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 gcggcgcaagctcgccggcga 159 ||||||||||||||||||||| Sbjct: 77405 gcggcgcaagctcgccggcga 77425 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 74265 cggcgcaagctcgccggcga 74246
>dbj|AP005785.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0453H10 Length = 133464 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 gcggcgcaagctcgccggcga 159 ||||||||||||||||||||| Sbjct: 51380 gcggcgcaagctcgccggcga 51400
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 gcggcgcaagctcgccggcga 159 ||||||||||||||||||||| Sbjct: 2100211 gcggcgcaagctcgccggcga 2100231 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 6178 cggcgcaagctcgccggcga 6197
>gb|AC004783.1|AC004783 Homo sapiens chromosome 1, BAC CIT-HSP-292g8 (BC262482), complete sequence Length = 96654 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 102 cccctctcccacaaccccacctcct 126 ||||||||||||| ||||||||||| Sbjct: 82491 cccctctcccacatccccacctcct 82515
>emb|AL732645.4|CNS08C9K Oryza sativa chromosome 12, . BAC OSJNBb0090H23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 134370 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 gcggcgcaagctcgccggcga 159 ||||||||||||||||||||| Sbjct: 68389 gcggcgcaagctcgccggcga 68369
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 142 gcgcaagctcgccggcgacgc 162 ||||||||||||||||||||| Sbjct: 1053172 gcgcaagctcgccggcgacgc 1053152
>emb|AL929024.9| Mouse DNA sequence from clone RP23-480H10 on chromosome 2, complete sequence Length = 159617 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 103 ccctctcccacaaccccacctcctc 127 ||||||||| ||||||||||||||| Sbjct: 91775 ccctctcccccaaccccacctcctc 91751
>gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genomic sequence, complete sequence Length = 157397 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 23949 cggcgcaagctcgccggcga 23968
>ref|XM_482752.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1899 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 376 cttcatccgcgccgtcgacgacct 399 |||| ||||||||||||||||||| Sbjct: 114 cttcctccgcgccgtcgacgacct 137
>ref|NM_194468.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OJ1136E01_5kb_extention.3), mRNA Length = 537 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 50 cggcgcaagctcgccggcga 69
>ref|XM_450568.1| Oryza sativa (japonica cultivar-group), mRNA Length = 339 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 50 cggcgcaagctcgccggcga 69
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 ccgacgccgatgtgctcaag 433 |||||||||||||||||||| Sbjct: 3639555 ccgacgccgatgtgctcaag 3639536
>ref|NM_193834.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 444 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 50 cggcgcaagctcgccggcga 69
>ref|NM_189775.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 747 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 397 cctccgctctctcctcgccgacgccgat 424 ||||||| |||||||| ||||||||||| Sbjct: 270 cctccgcgctctcctccccgacgccgat 297
>ref|XM_478586.1| Oryza sativa (japonica cultivar-group), mRNA Length = 921 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 cgcctgcggccggccggagc 296 |||||||||||||||||||| Sbjct: 671 cgcctgcggccggccggagc 690
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 cgccgatgtgctcaagggct 437 |||||||||||||||||||| Sbjct: 994497 cgccgatgtgctcaagggct 994516
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 ccgacgccgatgtgctcaag 433 |||||||||||||||||||| Sbjct: 160473 ccgacgccgatgtgctcaag 160492
>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01, complete sequence Length = 146432 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 ccgcgccgtcgacgacctcc 401 |||||||||||||||||||| Sbjct: 70110 ccgcgccgtcgacgacctcc 70129
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10, complete sequence Length = 187034 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 407 ctcctcgccgacgccgatgtgctc 430 ||||||||||||||||| |||||| Sbjct: 43910 ctcctcgccgacgccgacgtgctc 43887
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 ccgacgccgatgtgctcaag 433 |||||||||||||||||||| Sbjct: 370601 ccgacgccgatgtgctcaag 370620
>gb|AC113438.17| Mus musculus chromosome 6, clone RP23-191I2, complete sequence Length = 221969 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 cccctctcccacaaccccacctcc 125 |||||| ||||||||||||||||| Sbjct: 28697 cccctcccccacaaccccacctcc 28720
>ref|NM_014755.1| Homo sapiens SERTA domain containing 2 (SERTAD2), mRNA Length = 5544 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 cgagatcgaggagctctgtc 359 |||||||||||||||||||| Sbjct: 819 cgagatcgaggagctctgtc 838
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 22644197 cggcgcaagctcgccggcga 22644178
>gb|AY225312.1| Mycobacterium smegmatis polyketide synthase (mbtD) and nonribosomal peptide synthetase (mbtE) genes, partial cds Length = 3006 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gatgcggcgcaagctcgccg 155 |||||||||||||||||||| Sbjct: 1134 gatgcggcgcaagctcgccg 1153
>gb|AC122929.4| Mus musculus BAC clone RP23-12A18 from chromosome 6, complete sequence Length = 252503 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 102 cccctctcccacaaccccacctcc 125 |||||| ||||||||||||||||| Sbjct: 29820 cccctcccccacaaccccacctcc 29797
>gb|AY366085.1| Zea mays cultivar B73 PGP1 (pgp1) gene, complete cds Length = 7139 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 gctccgcgccgtcgcgcgag 329 |||||||||||||||||||| Sbjct: 1657 gctccgcgccgtcgcgcgag 1638
>gb|AC095491.7| Rattus norvegicus 4 BAC CH230-7L13 (Children's Hospital Oakland Research Institute) complete sequence Length = 293757 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 cctctcccacaaccccacct 123 |||||||||||||||||||| Sbjct: 9487 cctctcccacaaccccacct 9468
>emb|AL133341.12| Human DNA sequence from clone RP3-342O24 on chromosome 20 Contains ESTs and GSSs, complete sequence Length = 35033 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 ccccacctcctccagatctc 135 |||||||||||||||||||| Sbjct: 26789 ccccacctcctccagatctc 26770
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 16 cgacgccagctgccccgaccacccgctg 43 ||||||||||||| ||||| |||||||| Sbjct: 1723986 cgacgccagctgcgccgactacccgctg 1724013
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 373 cgacttcatccgcgccgtcgacga 396 |||||||||||||||| ||||||| Sbjct: 231723 cgacttcatccgcgccttcgacga 231700
>emb|AL731581.2|OSJN00228 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0022F16, complete sequence Length = 154397 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 108693 cggcgcaagctcgccggcga 108674
>emb|AL662941.3|OSJN00147 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074B10, complete sequence Length = 165400 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 123238 cggcgcaagctcgccggcga 123219
>gb|AC166065.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1136E01, complete sequence Length = 105139 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 11317 cggcgcaagctcgccggcga 11336
>gb|BC074789.2| Homo sapiens SERTA domain containing 2, mRNA (cDNA clone MGC:103952 IMAGE:30915346), complete cds Length = 1022 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 cgagatcgaggagctctgtc 359 |||||||||||||||||||| Sbjct: 564 cgagatcgaggagctctgtc 583
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 cgacgccgatgtgctcaagg 434 |||||||||||||||||||| Sbjct: 49952 cgacgccgatgtgctcaagg 49933
>emb|CR857936.1| Pongo pygmaeus mRNA; cDNA DKFZp469G0211 (from clone DKFZp469G0211) Length = 5032 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 cgagatcgaggagctctgtc 359 |||||||||||||||||||| Sbjct: 820 cgagatcgaggagctctgtc 839
>gb|AE005790.1| Caulobacter crescentus CB15 section 116 of 359 of the complete genome Length = 13182 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 ctcgatgcggcgcaagctcgccgg 156 ||||||||| |||||||||||||| Sbjct: 10364 ctcgatgcgacgcaagctcgccgg 10341
>gb|AC108883.1| Genomic sequence for (japonica cultivar-group) cultivar Nipponbare clone OJ1136E01, from chromosome 10, complete sequence Length = 113856 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 107679 cggcgcaagctcgccggcga 107660
>gb|AY017220.1| Ovis aries GTL2 gene, partial sequence Length = 979 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 ccccacctcctccagatctc 135 |||||||||||||||||||| Sbjct: 359 ccccacctcctccagatctc 378
>ref|NM_001024903.1| Rattus norvegicus SERTA domain containing 2 (Sertad2), mRNA Length = 1535 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 cgagatcgaggagctctgtc 359 |||||||||||||||||||| Sbjct: 682 cgagatcgaggagctctgtc 701
>gb|BC098047.1| Rattus norvegicus SERTA domain containing 2, mRNA (cDNA clone MGC:116204 IMAGE:7457109), complete cds Length = 1535 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 cgagatcgaggagctctgtc 359 |||||||||||||||||||| Sbjct: 682 cgagatcgaggagctctgtc 701
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 gccggcgacgcgccagcgtc 171 |||||||||||||||||||| Sbjct: 1737647 gccggcgacgcgccagcgtc 1737628
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 9707703 cggcgcaagctcgccggcga 9707722
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 376 cttcatccgcgccgtcgacgacct 399 |||| ||||||||||||||||||| Sbjct: 22346140 cttcctccgcgccgtcgacgacct 22346163
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 22637226 cggcgcaagctcgccggcga 22637207
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 cgcctgcggccggccggagc 296 |||||||||||||||||||| Sbjct: 1908417 cgcctgcggccggccggagc 1908398
>gb|AC016736.6| Homo sapiens BAC clone RP11-393J17 from 2, complete sequence Length = 149884 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 ccctctcccacaaccccacc 122 |||||||||||||||||||| Sbjct: 28622 ccctctcccacaaccccacc 28641
>gb|AC007365.3| Homo sapiens BAC clone RP11-451M22 from 2, complete sequence Length = 184285 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 cgagatcgaggagctctgtc 359 |||||||||||||||||||| Sbjct: 143454 cgagatcgaggagctctgtc 143473
>dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431G06 Length = 140466 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 397 cctccgctctctcctcgccgacgccgat 424 ||||||| |||||||| ||||||||||| Sbjct: 72056 cctccgcgctctcctccccgacgccgat 72029
>dbj|AP004740.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0092H22 Length = 165194 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 120814 cggcgcaagctcgccggcga 120795
>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0537A05 Length = 152396 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 10840 cggcgcaagctcgccggcga 10859
>dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1135C02 Length = 152306 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 84845 cggcgcaagctcgccggcga 84864
>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0575F10 Length = 150462 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 ccgcgccgtcgacgacctcc 401 |||||||||||||||||||| Sbjct: 108027 ccgcgccgtcgacgacctcc 108046
>dbj|AP005102.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0033J14 Length = 158233 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 85884 cggcgcaagctcgccggcga 85903
>dbj|AP003736.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1008_E09 Length = 101964 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 cgcctgcggccggccggagc 296 |||||||||||||||||||| Sbjct: 18156 cgcctgcggccggccggagc 18175
>dbj|AP005786.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0458H05 Length = 136299 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 cgcctgcggccggccggagc 296 |||||||||||||||||||| Sbjct: 84273 cgcctgcggccggccggagc 84292
>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0706E03 Length = 188028 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 147800 cggcgcaagctcgccggcga 147819
>dbj|AP004097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1792_D02 Length = 141649 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cctgcccaactcggcaactc 102 |||||||||||||||||||| Sbjct: 129311 cctgcccaactcggcaactc 129330
>dbj|AP003980.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1014_H03 Length = 132696 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cctgcccaactcggcaactc 102 |||||||||||||||||||| Sbjct: 15206 cctgcccaactcggcaactc 15225
>dbj|AP006754.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0018H03, complete sequence Length = 94450 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 ccgcgccgtcgacgacctcc 401 |||||||||||||||||||| Sbjct: 50965 ccgcgccgtcgacgacctcc 50984
>dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1144B06 Length = 133689 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 376 cttcatccgcgccgtcgacgacct 399 |||| ||||||||||||||||||| Sbjct: 43123 cttcctccgcgccgtcgacgacct 43146
>dbj|D50917.1| Homo sapiens mRNA for KIAA0127 gene, partial cds Length = 5544 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 cgagatcgaggagctctgtc 359 |||||||||||||||||||| Sbjct: 819 cgagatcgaggagctctgtc 838
>dbj|AK119265.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-A05, full insert sequence Length = 2752 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 407 ctcctcgccgacgccgatgtgctc 430 ||||||||||||||||| |||||| Sbjct: 1222 ctcctcgccgacgccgacgtgctc 1245
>ref|XM_321284.2| Anopheles gambiae str. PEST ENSANGP00000018492 (ENSANGG00000016003), partial mRNA Length = 1479 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 134 tcgatgcggcgcaagctcgccggc 157 ||||||||||||||| |||||||| Sbjct: 1297 tcgatgcggcgcaagatcgccggc 1320
>tpe|BN000542.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx13 gene for class III peroxidase 13 precursor, exons 1-3 Length = 9315 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 6729 cggcgcaagctcgccggcga 6748
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 acgccgatgtgctcaagggc 436 |||||||||||||||||||| Sbjct: 2914423 acgccgatgtgctcaagggc 2914442 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 cgacgccgatgtgctcaagg 434 |||||||||||||||||||| Sbjct: 1158180 cgacgccgatgtgctcaagg 1158199
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 gatgcggcgcaagctcgccg 155 |||||||||||||||||||| Sbjct: 237830 gatgcggcgcaagctcgccg 237811
>emb|AL954154.5|CNS08CCS Oryza sativa chromosome 12, . BAC OSJNBb0072E04 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151176 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 124955 cggcgcaagctcgccggcga 124936
>emb|AL844496.4|CNS08CAT Oryza sativa chromosome 12, . BAC OSJNBb0026N09 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135462 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 5095 cggcgcaagctcgccggcga 5076
>emb|AL831810.4|CNS08CAN Oryza sativa chromosome 12, . BAC OSJNBa0077B14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153111 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 137393 cggcgcaagctcgccggcga 137374
>emb|AL713954.3|CNS07YPZ Oryza sativa chromosome 12, . BAC OJ1134_G02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121600 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 60798 cggcgcaagctcgccggcga 60817
>emb|AL731760.2|CNS07YPJ Oryza sativa chromosome 12, . BAC OJ1005_C11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104533 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 cggcgcaagctcgccggcga 159 |||||||||||||||||||| Sbjct: 1937 cggcgcaagctcgccggcga 1918
>gb|BC101639.1| Homo sapiens SERTA domain containing 2, mRNA (cDNA clone MGC:126688 IMAGE:8069145), complete cds Length = 1075 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 cgagatcgaggagctctgtc 359 |||||||||||||||||||| Sbjct: 603 cgagatcgaggagctctgtc 622
>gb|BC101641.1| Homo sapiens SERTA domain containing 2, mRNA (cDNA clone MGC:126690 IMAGE:8069147), complete cds Length = 1067 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 cgagatcgaggagctctgtc 359 |||||||||||||||||||| Sbjct: 604 cgagatcgaggagctctgtc 623
>gb|BC074788.2| Homo sapiens SERTA domain containing 2, mRNA (cDNA clone MGC:104110 IMAGE:30915563), complete cds Length = 1022 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 cgagatcgaggagctctgtc 359 |||||||||||||||||||| Sbjct: 564 cgagatcgaggagctctgtc 583 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,950,446 Number of Sequences: 3902068 Number of extensions: 2950446 Number of successful extensions: 70433 Number of sequences better than 10.0: 106 Number of HSP's better than 10.0 without gapping: 120 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 66590 Number of HSP's gapped (non-prelim): 3839 length of query: 437 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 415 effective length of database: 17,147,199,772 effective search space: 7116087905380 effective search space used: 7116087905380 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
