>CP6D3_MUSDO (Q964Q7) Cytochrome P450 6d3 (EC 1.14.-.-) (CYPVID3) (Pyrethroid|
           resistance cytochrome P450)
          Length = 520

 Score = 31.6 bits (70), Expect = 0.99
 Identities = 19/52 (36%), Positives = 29/52 (55%)
 Frame = +3

Query: 270 KIFARRNMEGGLSSSDLYGEFRDQLAQALLRVEPAILRVLIEVFRQVAEKDF 425
           K+F R+    GL   DLY +F++Q+    L  +PA+L    E+ RQ+   DF
Sbjct: 43  KVF-RKERPFGLVMYDLYEKFQEQVVGIYLFFKPALLIRDAELARQILTSDF 93

>PKP3_HUMAN (Q9Y446) Plakophilin-3|
          Length = 797

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -3

Query: 416 LRNLAKNFNQHSKNCRFHSKQSLSKLVAKLPVQIGRREPPFHV 288
           L  L +N +++++N    S + +S L+ KLP  +G + PP  V
Sbjct: 675 LTGLIRNLSRNARNKDEMSTKVVSHLIEKLPGSVGEKSPPAEV 717

>CSE1_DROME (Q9XZU1) Importin-alpha re-exporter (Cellular apoptosis|
           susceptibility protein homolog)
          Length = 975

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 35/128 (27%), Positives = 52/128 (40%), Gaps = 8/128 (6%)
 Frame = +3

Query: 96  LRSLLAATLSADKTSVDAATAGLDRISAAGDPRFPIALL-AVAAGDGDQGTRIAAAAYLK 272
           L   L  TLSAD      A   L+  S      +PI LL  +     D  TR+A A   K
Sbjct: 11  LAGYLQQTLSADPNVRRPAEKLLE--STELQQNYPILLLNLIDKAQMDMTTRVAGAIAFK 68

Query: 273 IFARRNMEGGLSSS--DLYGE-----FRDQLAQALLRVEPAILRVLIEVFRQVAEKDFVK 431
            + +RN    L S   D   E      +  +   +L    A+ + L +    + + DF K
Sbjct: 69  NYIKRNWAAHLDSDGPDRIHESDRNTIKTLIVTLMLHSPVALQKQLSDAVSIIGKYDFPK 128

Query: 432 ENSWPELV 455
           +  WP+L+
Sbjct: 129 K--WPQLI 134

>SMG1_CAEBR (Q61CW2) Serine/threonine-protein kinase smg-1 (EC 2.7.11.1)|
            (Suppressor with morphogenetic effect on genitalia
            protein 1)
          Length = 2319

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +3

Query: 285  RNMEGGLSSSDLYGEFRDQLAQAL--LRVEPAILRVLIEVF 401
            RNM   L  SD+YG FR+     L  LR    +L +L++ F
Sbjct: 2005 RNMRHALGPSDMYGTFRESCVHVLSTLRSGHQVLTMLLDAF 2045

>SMG1_CAEEL (O01510) Serine/threonine-protein kinase smg-1 (EC 2.7.11.1)|
            (Suppressor with morphogenetic effect on genitalia
            protein 1)
          Length = 2322

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = +3

Query: 234  DQGTRIAAAAYLKIFARRNMEGGLSSSDLYGEFRDQLAQAL--LRVEPAILRVLIEVF 401
            D+G  +     +     RNM   L  S++YG FR+     L  LR    +L +L++ F
Sbjct: 1991 DKGKNLRIPETVPFRLTRNMRHALGPSEMYGTFRESCVHVLSTLRSGHQVLTMLLDAF 2048

>ISPE_SYNP7 (Q31RH7) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC|
           2.7.1.148) (CMK)
           (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
           kinase)
          Length = 314

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 27/110 (24%), Positives = 41/110 (37%), Gaps = 16/110 (14%)
 Frame = +3

Query: 93  ELRSLLAATLSADKTSVDAATAGLDRISAAGDPRFPIALLAVAAGD-------------- 230
           E R  + A L+   T   AA  GLD  S  G  +  +  +A   G               
Sbjct: 91  EKRIPIGAGLAGGSTDGAAALVGLDIFSGLGLTQPELEAIAAELGSDMPFCVAGGTQLCT 150

Query: 231 --GDQGTRIAAAAYLKIFARRNMEGGLSSSDLYGEFRDQLAQALLRVEPA 374
             G+Q T +     L +   +     +S+   YG +R+Q     L+ EPA
Sbjct: 151 SRGEQLTPLPPLPSLSLVLAKFESLSVSTPWAYGRYREQFGDRYLQTEPA 200

>ISPE_SYNP6 (Q5N2S7) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC|
           2.7.1.148) (CMK)
           (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
           kinase)
          Length = 314

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 27/110 (24%), Positives = 41/110 (37%), Gaps = 16/110 (14%)
 Frame = +3

Query: 93  ELRSLLAATLSADKTSVDAATAGLDRISAAGDPRFPIALLAVAAGD-------------- 230
           E R  + A L+   T   AA  GLD  S  G  +  +  +A   G               
Sbjct: 91  EKRIPIGAGLAGGSTDGAAALVGLDIFSGLGLTQPELEAIAAELGSDMPFCVAGGTQLCT 150

Query: 231 --GDQGTRIAAAAYLKIFARRNMEGGLSSSDLYGEFRDQLAQALLRVEPA 374
             G+Q T +     L +   +     +S+   YG +R+Q     L+ EPA
Sbjct: 151 SRGEQLTPLPPLPSLSLVLAKFESLSVSTPWAYGRYREQFGDRYLQTEPA 200

>CSE1_PAGMA (Q9PTU3) Importin-alpha re-exporter (Chromosome segregation 1-like|
           protein) (Cellular apoptosis susceptibility protein)
          Length = 971

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 29/125 (23%), Positives = 48/125 (38%), Gaps = 5/125 (4%)
 Frame = +3

Query: 96  LRSLLAATLSADKTSVDAATAGLDRISAAGDPRFPIALLAVAAGDGDQGTRIAAAAYLKI 275
           L   L   L  D T    A   L+  S  G+  +P+ LL +     D   R+ AA   K 
Sbjct: 11  LTEFLRKALDPDPTVRRPAEKFLE--SVEGNQNYPLLLLTLLEKSQDNVIRVCAAVTFKN 68

Query: 276 FARRNM-----EGGLSSSDLYGEFRDQLAQALLRVEPAILRVLIEVFRQVAEKDFVKENS 440
           + +RN      E    S       +  +   +L     I + L +    +  +DF ++  
Sbjct: 69  YIKRNWRVIEDEPNKVSDPDRTAIKANIVNLMLSSPEQIQKQLSDAISIIGREDFPQK-- 126

Query: 441 WPELV 455
           WP+L+
Sbjct: 127 WPDLL 131

>PKP3_MOUSE (Q9QY23) Plakophilin-3|
          Length = 797

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -3

Query: 416 LRNLAKNFNQHSKNCRFHSKQSLSKLVAKLPVQIGRREPPFHV 288
           L  L +N +++++N    S + +S L+ KLP  +G + PP  V
Sbjct: 675 LTGLIRNLSRNARNKDEMSTKVVSHLIEKLPGSVGEKCPPAEV 717

>TBC2_CHLRE (Q8VXP3) Tbc2 translation factor, chloroplast precursor|
          Length = 1115

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 10/49 (20%)
 Frame = +3

Query: 147  AATAGLDRISAAGDPRFPIALLAVAAGDG----------DQGTRIAAAA 263
            AA AG    +AAGD    ++ +  AAGDG          D GT   AAA
Sbjct: 933  AAPAGASSAAAAGDSPAALSAVPAAAGDGALVPSFMSIDDDGTAAVAAA 981

>PROV_ECOLI (P14175) Glycine betaine/L-proline transport ATP-binding protein|
           proV
          Length = 400

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
 Frame = -3

Query: 425 KIFLRNLAKNFNQHSKNCRFHSKQSLSK--LVAKLPVQIGRREPPFHVAPGENFQVS--R 258
           K+ ++NL K F +H +    + +Q LSK  ++ K  + +G ++    +  GE F +    
Sbjct: 4   KLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLS 63

Query: 257 GSYSCTLITI 228
           GS   T++ +
Sbjct: 64  GSGKSTMVRL 73

>VP4_ROTB9 (Q08010) Outer capsid protein VP4 (Hemagglutinin) (Outer layer|
           protein VP4) [Contains: Outer capsid protein VP8; Outer
           capsid protein VP5]
          Length = 770

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
 Frame = +3

Query: 102 SLLAATLSADKTSVDAATAGLDRISAAGDPRFPIALLAVAAGD-GDQGTRIAAAAYLKIF 278
           S +   LS   TSV  A++     S   +        +VA  D   Q +RIA+   +K F
Sbjct: 558 STITEELSDAATSVSRASSIRSNASVWNNLVDTRTQTSVATNDIATQTSRIASKLRVKEF 617

Query: 279 ARRNMEGGLSSSDLYGEFRDQLAQALLRVEPAILRVLI 392
           A +  EGGLS +D+           +  V+P IL  +I
Sbjct: 618 ATQT-EGGLSFNDISAAVLKTKIDKIETVQPKILPTII 654

>MMPL3_MYCTU (O53657) Putative membrane protein mmpL3|
          Length = 944

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 20/53 (37%), Positives = 22/53 (41%), Gaps = 5/53 (9%)
 Frame = +3

Query: 177  AAGDPRFPIALLAVAAGDGDQGTRI-----AAAAYLKIFARRNMEGGLSSSDL 320
            AAGDP  P A L +   DGD          A     K   RR   G LS+ DL
Sbjct: 885  AAGDPAEPTAALPIIRSDGDDSEAATEQLNARGTSDKTRQRRRGGGALSAQDL 937


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,150,747
Number of Sequences: 219361
Number of extensions: 639328
Number of successful extensions: 2528
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2527
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)