Clone Name | bastl25h12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, ... | 76 | 1e-11 | 2 | emb|CR354383.8| Zebrafish DNA sequence from clone CH211-123O7 in... | 38 | 3.2 | 3 | emb|CR354613.7| Zebrafish DNA sequence from clone CH211-112G7 in... | 38 | 3.2 |
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>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 Score = 75.8 bits (38), Expect = 1e-11 Identities = 72/78 (92%), Gaps = 4/78 (5%) Strand = Plus / Plus Query: 1 acacagcagcaccacagcgagctaacttagcaagcgtgccacactccccagagatcgagc 60 |||||||| |||| |||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 4 acacagca-caccgcagcgagctaacttag-aagcgtgccacact-cccagagatcgagc 60 Query: 61 gaagatgtttggcgtcgg 78 |||||| |||||||||| Sbjct: 61 -aagatgcttggcgtcgg 77
>emb|CR354383.8| Zebrafish DNA sequence from clone CH211-123O7 in linkage group 21, complete sequence Length = 168569 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 acacagcagcaccacagcg 19 ||||||||||||||||||| Sbjct: 55970 acacagcagcaccacagcg 55952
>emb|CR354613.7| Zebrafish DNA sequence from clone CH211-112G7 in linkage group 21, complete sequence Length = 179432 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 acacagcagcaccacagcg 19 ||||||||||||||||||| Sbjct: 95885 acacagcagcaccacagcg 95867 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 435,449 Number of Sequences: 3902068 Number of extensions: 435449 Number of successful extensions: 25850 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 25845 Number of HSP's gapped (non-prelim): 4 length of query: 78 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 57 effective length of database: 17,151,101,840 effective search space: 977612804880 effective search space used: 977612804880 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)