ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl25h10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PP2CG_BOVIN (P79126) Protein phosphatase 2C isoform gamma (EC 3.... 33 0.25
2PP2CG_HUMAN (O15355) Protein phosphatase 2C isoform gamma (EC 3.... 32 0.33
3ANSP2_MYCTU (P0A4W0) L-asparagine permease 2 (L-asparagine trans... 32 0.57
4ANSP2_MYCBO (P0A4W1) L-asparagine permease 2 (L-asparagine trans... 32 0.57
5PP2CG_MOUSE (Q61074) Protein phosphatase 2C isoform gamma (EC 3.... 31 0.74
6VNSS_TSWVL (P26003) Nonstructural protein NS-S 30 1.6
7BAI3_MOUSE (Q80ZF8) Brain-specific angiogenesis inhibitor 3 prec... 29 3.7
8GUAA_BORGA (Q6ASN4) GMP synthase [glutamine-hydrolyzing] (EC 6.3... 28 4.8
9BAI3_HUMAN (O60242) Brain-specific angiogenesis inhibitor 3 prec... 28 8.2

>PP2CG_BOVIN (P79126) Protein phosphatase 2C isoform gamma (EC 3.1.3.16)|
           (PP2C-gamma) (Protein phosphatase magnesium-dependent 1
           gamma) (Protein phosphatase 1B) (Magnesium-dependent
           calcium inhibitable phosphatase) (MCPP)
          Length = 543

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
 Frame = +3

Query: 33  LGPEPELVLSLR----MSLDDNHESVVLACAKVINVMLSYDMNESYFDFSEKLINQTED 197
           L PE +++ +L     ++L D+HE +V+AC  + NVM S ++     DF +  I+Q ++
Sbjct: 409 LPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEV----IDFIQSKISQRDE 463



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>PP2CG_HUMAN (O15355) Protein phosphatase 2C isoform gamma (EC 3.1.3.16)|
           (PP2C-gamma) (Protein phosphatase magnesium-dependent 1
           gamma) (Protein phosphatase 1C)
          Length = 546

 Score = 32.3 bits (72), Expect = 0.33
 Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
 Frame = +3

Query: 33  LGPEPELVLSLR----MSLDDNHESVVLACAKVINVMLSYDMNESYFDFSEKLINQTED 197
           L PE +++ +L     ++L D+HE +V+AC  + NVM S ++     DF +  I+Q ++
Sbjct: 411 LPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEV----VDFIQSKISQRDE 465



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>ANSP2_MYCTU (P0A4W0) L-asparagine permease 2 (L-asparagine transport protein 2)|
          Length = 487

 Score = 31.6 bits (70), Expect = 0.57
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -3

Query: 184 FINFSEKSKYDSFMS*LNITLITLAQAKTTDSWLSSNDILRERTNSGSGPR 32
           F+ F  K   D+  S +N+ ++T A +       S+  ILR    +GSGPR
Sbjct: 283 FVTFFSKIGIDAAGSVMNLVVLTAALSSLNAGLYSTGRILRSMAINGSGPR 333



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>ANSP2_MYCBO (P0A4W1) L-asparagine permease 2 (L-asparagine transport protein 2)|
          Length = 487

 Score = 31.6 bits (70), Expect = 0.57
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -3

Query: 184 FINFSEKSKYDSFMS*LNITLITLAQAKTTDSWLSSNDILRERTNSGSGPR 32
           F+ F  K   D+  S +N+ ++T A +       S+  ILR    +GSGPR
Sbjct: 283 FVTFFSKIGIDAAGSVMNLVVLTAALSSLNAGLYSTGRILRSMAINGSGPR 333



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>PP2CG_MOUSE (Q61074) Protein phosphatase 2C isoform gamma (EC 3.1.3.16)|
           (PP2C-gamma) (Protein phosphatase magnesium-dependent 1
           gamma) (Protein phosphatase 1C) (Fibroblast growth
           factor-inducible protein 13) (FIN13)
          Length = 542

 Score = 31.2 bits (69), Expect = 0.74
 Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
 Frame = +3

Query: 33  LGPEPELVLSLR----MSLDDNHESVVLACAKVINVMLSYDMNESYFDFSEKLINQTED 197
           L P+ +++ +L     ++L D+HE +V+AC  + NVM S ++     DF +  I+Q ++
Sbjct: 408 LPPQEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEV----VDFIQSKISQRDE 462



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>VNSS_TSWVL (P26003) Nonstructural protein NS-S|
          Length = 467

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 117 VINVMLSYDMNESYFDFSEKLINQTEDICTAPVFRSK 227
           +I  + +Y++     D  E+ +N +EDIC    F SK
Sbjct: 362 IIYTLNNYELTPGKLDLGERTLNYSEDICKRKYFLSK 398



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>BAI3_MOUSE (Q80ZF8) Brain-specific angiogenesis inhibitor 3 precursor|
          Length = 1522

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -2

Query: 248 KTSIHIRFATKNRSCADIFRLIYQFXXXXXXXXIHVIAQ-HNINNFSASQN 99
           K SI+++F+ K+ SC++   L YQF          ++ + H+I    +S+N
Sbjct: 66  KYSIYLKFSKKDLSCSNFSLLAYQFDHFSHEKIKDLLRKNHSIMQLCSSKN 116



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>GUAA_BORGA (Q6ASN4) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 528

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 114 KVINVMLSYDMNESYFDFSEKLINQTEDI 200
           K++ +   YD+N  Y D SEK +N  ++I
Sbjct: 277 KILELKHQYDLNIKYIDASEKFLNYLKNI 305



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>BAI3_HUMAN (O60242) Brain-specific angiogenesis inhibitor 3 precursor|
          Length = 1522

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -2

Query: 248 KTSIHIRFATKNRSCADIFRLIYQFXXXXXXXXIHVIAQ-HNINNFSASQN 99
           K SI+++F+ K+ SC++   L YQF          ++ + H+I     S+N
Sbjct: 66  KYSIYLKFSKKDLSCSNFSLLAYQFDHFSHEKIKDLLRKNHSIMQLCNSKN 116


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,279,750
Number of Sequences: 219361
Number of extensions: 516944
Number of successful extensions: 1507
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1507
length of database: 80,573,946
effective HSP length: 58
effective length of database: 67,851,008
effective search space used: 1628424192
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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