ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl25h09 |
|---|---|
| Clone Library Name | barley_pub |
>COPB2_YEAST (P41811) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)| Length = 889 Score = 38.5 bits (88), Expect = 0.007 Identities = 15/37 (40%), Positives = 23/37 (62%) Frame = +1 Query: 181 RAFRPTSDKVVKIQLHPTHPWLVTADANDRVSVWDWE 291 + F SD+V I HPT PW++T + RV +W++E Sbjct: 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYE 43 Score = 31.6 bits (70), Expect = 0.83 Identities = 12/46 (26%), Positives = 24/46 (52%) Frame = +1 Query: 187 FRPTSDKVVKIQLHPTHPWLVTADANDRVSVWDWEHRQVIYELRAG 324 F D + I +HPT P++++ + V +W+WE+ + + G Sbjct: 93 FEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG 138
>COPB2_RAT (O35142) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)| (p102) Length = 904 Score = 37.7 bits (86), Expect = 0.012 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = +1 Query: 181 RAFRPTSDKVVKIQLHPTHPWLVTADANDRVSVWDWEHRQVI 306 R SD+V + LHPT PW++ + N V VW+ E + ++ Sbjct: 8 RKLTAMSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLV 49 Score = 36.6 bits (83), Expect = 0.026 Identities = 13/41 (31%), Positives = 25/41 (60%) Frame = +1 Query: 175 RLRAFRPTSDKVVKIQLHPTHPWLVTADANDRVSVWDWEHR 297 R+ F SD + I +HPT P+++T+ + + +WDW+ + Sbjct: 90 RVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKK 130
>COPB2_MOUSE (O55029) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)| (p102) Length = 905 Score = 37.7 bits (86), Expect = 0.012 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = +1 Query: 181 RAFRPTSDKVVKIQLHPTHPWLVTADANDRVSVWDWEHRQVI 306 R SD+V + LHPT PW++ + N V VW+ E + ++ Sbjct: 9 RKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLV 50 Score = 36.6 bits (83), Expect = 0.026 Identities = 13/41 (31%), Positives = 25/41 (60%) Frame = +1 Query: 175 RLRAFRPTSDKVVKIQLHPTHPWLVTADANDRVSVWDWEHR 297 R+ F SD + I +HPT P+++T+ + + +WDW+ + Sbjct: 91 RVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKK 131
>COPB2_HUMAN (P35606) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)| (p102) Length = 905 Score = 37.7 bits (86), Expect = 0.012 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = +1 Query: 181 RAFRPTSDKVVKIQLHPTHPWLVTADANDRVSVWDWEHRQVI 306 R SD+V + LHPT PW++ + N V VW+ E + ++ Sbjct: 8 RKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLV 49 Score = 36.6 bits (83), Expect = 0.026 Identities = 13/41 (31%), Positives = 25/41 (60%) Frame = +1 Query: 175 RLRAFRPTSDKVVKIQLHPTHPWLVTADANDRVSVWDWEHR 297 R+ F SD + I +HPT P+++T+ + + +WDW+ + Sbjct: 90 RVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKK 130
>COPB2_BOVIN (P35605) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)| (p102) Length = 905 Score = 37.7 bits (86), Expect = 0.012 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = +1 Query: 181 RAFRPTSDKVVKIQLHPTHPWLVTADANDRVSVWDWEHRQVI 306 R SD+V + LHPT PW++ + N V VW+ E + ++ Sbjct: 8 RKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLV 49 Score = 36.6 bits (83), Expect = 0.026 Identities = 13/41 (31%), Positives = 25/41 (60%) Frame = +1 Query: 175 RLRAFRPTSDKVVKIQLHPTHPWLVTADANDRVSVWDWEHR 297 R+ F SD + I +HPT P+++T+ + + +WDW+ + Sbjct: 90 RVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKK 130
>COPB2_DROME (O62621) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)| Length = 914 Score = 36.6 bits (83), Expect = 0.026 Identities = 16/53 (30%), Positives = 28/53 (52%) Frame = +1 Query: 181 RAFRPTSDKVVKIQLHPTHPWLVTADANDRVSVWDWEHRQVIYELRAGGVDER 339 R SD+V + LHP PW++ A N V + ++E++Q++ + V R Sbjct: 9 RRLTSRSDRVKCVDLHPAEPWMLCALYNGHVHIMNYENQQMVKDFEVCDVPVR 61 Score = 32.7 bits (73), Expect = 0.37 Identities = 12/39 (30%), Positives = 24/39 (61%) Frame = +1 Query: 175 RLRAFRPTSDKVVKIQLHPTHPWLVTADANDRVSVWDWE 291 ++ +F SD + I +HPT P ++T+ + + +W+WE Sbjct: 91 KVHSFEAHSDYLRCIAVHPTQPLVLTSSDDMLIKLWNWE 129
>COPB2_SCHPO (O42937) Probable coatomer subunit beta' (Beta'-coat protein)| (Beta'-COP) Length = 796 Score = 35.0 bits (79), Expect = 0.075 Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 3/49 (6%) Frame = +1 Query: 169 MLRL---RAFRPTSDKVVKIQLHPTHPWLVTADANDRVSVWDWEHRQVI 306 M+RL R +++V + HPT PW++ + N +V +W++ + ++ Sbjct: 1 MMRLDFQRKLLSHTERVKAVDFHPTEPWVIASHYNGQVGIWNYNTQTLV 49
>COPB2_CAEEL (Q20168) Probable coatomer subunit beta' (Beta'-coat protein)| (Beta'-COP) Length = 1000 Score = 35.0 bits (79), Expect = 0.075 Identities = 12/41 (29%), Positives = 26/41 (63%) Frame = +1 Query: 175 RLRAFRPTSDKVVKIQLHPTHPWLVTADANDRVSVWDWEHR 297 R+ F SD + + +HPT P+++++ + V +WDW+++ Sbjct: 91 RVHQFEAHSDYLRSLVVHPTLPYVISSSDDMLVKMWDWDNK 131 Score = 34.7 bits (78), Expect = 0.098 Identities = 13/36 (36%), Positives = 22/36 (61%) Frame = +1 Query: 199 SDKVVKIQLHPTHPWLVTADANDRVSVWDWEHRQVI 306 SD+V + LHP WL+ A N V +W++E + ++ Sbjct: 15 SDRVKCVDLHPVETWLLAALYNGNVHIWNYETQTLV 50
>SPDYC_HUMAN (Q5MJ68) Speedy protein C (Rapid inducer of G2/M progression in| oocytes C) (RINGO C) (hSpy/Ringo C) Length = 293 Score = 34.7 bits (78), Expect = 0.098 Identities = 14/24 (58%), Positives = 18/24 (75%) Frame = +3 Query: 36 NPCELPQHCTSHLLSPRISRSLAL 107 +PC LPQHC+SHLL P S+ +L Sbjct: 217 SPCGLPQHCSSHLLKPVSSKCPSL 240
>DMXL1_MOUSE (Q6PNC0) Protein DmX-like 1 (X-like 1 protein)| Length = 3013 Score = 34.3 bits (77), Expect = 0.13 Identities = 21/81 (25%), Positives = 39/81 (48%) Frame = +1 Query: 85 GSPDLSRSSLHPPLARYDVAAARGGHGEMLRLRAFRPTSDKVVKIQLHPTHPWLVTADAN 264 GS + S+ P+ + + + G G + L+ + V ++ HPT P+ +T + Sbjct: 2695 GSTPYTHSNPGTPINMPWLGSTQTGRGASVMLKK---AINNVRRMTSHPTLPYYLTGAQD 2751 Query: 265 DRVSVWDWEHRQVIYELRAGG 327 V +++W H Q I R+GG Sbjct: 2752 GSVRMFEWGHSQQITCFRSGG 2772
>DMXL1_HUMAN (Q9Y485) Protein DmX-like 1 (X-like 1 protein)| Length = 3027 Score = 32.3 bits (72), Expect = 0.49 Identities = 19/81 (23%), Positives = 39/81 (48%) Frame = +1 Query: 85 GSPDLSRSSLHPPLARYDVAAARGGHGEMLRLRAFRPTSDKVVKIQLHPTHPWLVTADAN 264 G+ + S+ P+ + + + G G + ++ + V ++ HPT P+ +T + Sbjct: 2709 GTTPYTHSNPGTPINMPWLGSTQTGRGASVMIKK---AINNVRRMTSHPTLPYYLTGAQD 2765 Query: 265 DRVSVWDWEHRQVIYELRAGG 327 V +++W H Q I R+GG Sbjct: 2766 GSVRMFEWGHSQQITCFRSGG 2786
>COPA_HUMAN (P53621) Coatomer subunit alpha (Alpha-coat protein) (Alpha-COP)| (HEPCOP) (HEP-COP) [Contains: Xenin (Xenopsin-related peptide); Proxenin] Length = 1224 Score = 32.3 bits (72), Expect = 0.49 Identities = 12/37 (32%), Positives = 20/37 (54%) Frame = +1 Query: 178 LRAFRPTSDKVVKIQLHPTHPWLVTADANDRVSVWDW 288 L F S +V + HP PW++T+ N + +WD+ Sbjct: 2 LTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDY 38 Score = 30.4 bits (67), Expect = 1.9 Identities = 8/27 (29%), Positives = 17/27 (62%) Frame = +1 Query: 226 HPTHPWLVTADANDRVSVWDWEHRQVI 306 H +PW+++A + + VW+W+ R + Sbjct: 102 HHEYPWILSASDDQTIRVWNWQSRTCV 128
>COPA_BOVIN (Q27954) Coatomer subunit alpha (Alpha-coat protein) (Alpha-COP)| (HEPCOP) (HEP-COP) [Contains: Xenin (Xenopsin-related peptide); Proxenin] Length = 1224 Score = 32.3 bits (72), Expect = 0.49 Identities = 12/37 (32%), Positives = 20/37 (54%) Frame = +1 Query: 178 LRAFRPTSDKVVKIQLHPTHPWLVTADANDRVSVWDW 288 L F S +V + HP PW++T+ N + +WD+ Sbjct: 2 LTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDY 38 Score = 30.4 bits (67), Expect = 1.9 Identities = 8/27 (29%), Positives = 17/27 (62%) Frame = +1 Query: 226 HPTHPWLVTADANDRVSVWDWEHRQVI 306 H +PW+++A + + VW+W+ R + Sbjct: 102 HHEYPWILSASDDQTIRVWNWQSRTCV 128
>COPA_YEAST (P53622) Coatomer subunit alpha (Alpha-coat protein) (Alpha-COP)| Length = 1201 Score = 32.0 bits (71), Expect = 0.64 Identities = 10/35 (28%), Positives = 21/35 (60%) Frame = +1 Query: 202 DKVVKIQLHPTHPWLVTADANDRVSVWDWEHRQVI 306 D V + H PW+++A + + +W+W++R+ I Sbjct: 96 DYVRTVFFHRELPWIISASDDQTIRIWNWQNRKEI 130 Score = 31.6 bits (70), Expect = 0.83 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 5/60 (8%) Frame = +1 Query: 169 MLRLRAFRPTSDKVVKIQLHPTHPWLVTADANDRVSVWDWE-----HRQVIYELRAGGVD 333 M L F S + I HP+ PW++ A + + +WD+ HR +E G+D Sbjct: 1 MKMLTKFESKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLD 60 Score = 28.5 bits (62), Expect = 7.1 Identities = 17/57 (29%), Positives = 25/57 (43%) Frame = +1 Query: 178 LRAFRPTSDKVVKIQLHPTHPWLVTADANDRVSVWDWEHRQVIYELRAGGVDERRLV 348 L F V + HPT P V+A + + VW + + +Y L G +D R V Sbjct: 46 LHRFEDHEGPVRGLDFHPTQPIFVSAGDDYTIKVWSLDTNKCLYTL-TGHLDYVRTV 101
>KTNB1_STRPU (O61585) Katanin p80 WD40-containing subunit B1 (Katanin p80| subunit B1) (p80 katanin) Length = 690 Score = 31.6 bits (70), Expect = 0.83 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Frame = +1 Query: 187 FRPTSDKVVKIQLHPTHPWLVTADANDRVSVWDWEHRQVIYELR--AGGV 330 ++ SD+V I+ P WLVTA + + +WD ++ E + GGV Sbjct: 139 YKGHSDQVNMIKFSPDGKWLVTASEDTTIKLWDLTMGKLFQEFKNHTGGV 188
>CORO7_HUMAN (P57737) Coronin-7 (70 kDa WD repeat tumor rejection antigen| homolog) Length = 925 Score = 30.8 bits (68), Expect = 1.4 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = +1 Query: 193 PTSDKVVKIQLHPTHPWLVTADANDRVSVWDWEHRQVIYELRAGG 327 P V +Q HPT ++ + A V VWD +Q + EL A G Sbjct: 124 PEDLPVEVLQFHPTSDGILVSAAGTTVKVWDAAKQQPLTELAAHG 168
>DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 406 Score = 30.4 bits (67), Expect = 1.9 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Frame = +1 Query: 13 QISPSSVPTPASYHNTAHLICSPPGS---PDLSRSSLHPPLARYDVAAARGGHGEML 174 Q +P VP P + A L PP S PD+S+ PP A+ D + G+G+ L Sbjct: 303 QFAPPGVPPPPATPGAAPLAFPPPPSQAAPDMSK----PPTAQPDFPYGQYGYGQDL 355
>UTP13_SCHPO (Q9USN3) Probable U3 small nucleolar RNA-associated protein 13 (U3| snoRNA-associated protein 13) Length = 777 Score = 30.4 bits (67), Expect = 1.9 Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 3/76 (3%) Frame = +1 Query: 175 RLRAFRPTSDKVVKIQLHPTHPWLVTADANDRVSVWDWEHRQVIYELRA-GGVDERRLVG 351 R+++ + V+ + + PT+ L T A V VWD V + R GGV G Sbjct: 95 RIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFG 154 Query: 352 VKLEK--LAEGETDSK 393 LA G DS+ Sbjct: 155 KHQNTWVLASGADDSR 170
>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)| Length = 809 Score = 30.0 bits (66), Expect = 2.4 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%) Frame = -3 Query: 351 TNQPPFIDAT--RPQLIDHLAVLPVPDRDAVIGV 256 TN+P ID+ RP +D L +P+PD D+ + + Sbjct: 627 TNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNI 660
>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)| (Transitional endoplasmic reticulum ATPase E) Length = 810 Score = 30.0 bits (66), Expect = 2.4 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%) Frame = -3 Query: 351 TNQPPFIDAT--RPQLIDHLAVLPVPDRDAVIGV 256 TN+P ID+ RP +D L +P+PD D+ + + Sbjct: 626 TNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNI 659
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 29.6 bits (65), Expect = 3.2 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Frame = +1 Query: 22 PSSVPTPASYHNT-AHLICSPPGSPDLSRSSLHPPLARYDVAAAR 153 PS +P+P+S T A L + PG+P +L PP R AAA+ Sbjct: 4045 PSQLPSPSSQLPTEAQLPPTHPGTPKPQGPTLEPPPGRVSPAAAQ 4089
>ESR1_OREAU (P50240) Estrogen receptor (ER) (Estradiol receptor) (ER-alpha)| Length = 583 Score = 29.6 bits (65), Expect = 3.2 Identities = 29/114 (25%), Positives = 44/114 (38%) Frame = +1 Query: 10 TQISPSSVPTPASYHNTAHLICSPPGSPDLSRSSLHPPLARYDVAAARGGHGEMLRLRAF 189 T +P+ PTP H+T +P H PL+ + + G L F Sbjct: 23 TMTAPTPAPTPLYSHSTTGCYSAP--------LDAHGPLSDGSLQSLGSGPTSPL---VF 71 Query: 190 RPTSDKVVKIQLHPTHPWLVTADANDRVSVWDWEHRQVIYELRAGGVDERRLVG 351 P+S ++ P+H +L T V+ H+ V E + G DE VG Sbjct: 72 VPSSPRLSPFMHPPSHHYLETTS----TPVYRSSHQPVPREDQCGTRDEAYSVG 121
>PLRG1_MOUSE (Q922V4) Pleiotropic regulator 1| Length = 513 Score = 29.6 bits (65), Expect = 3.2 Identities = 20/88 (22%), Positives = 35/88 (39%) Frame = +1 Query: 22 PSSVPTPASYHNTAHLICSPPGSPDLSRSSLHPPLARYDVAAARGGHGEMLRLRAFRPTS 201 P+++ + NT + +P + + HPP Y V + GH +R Sbjct: 159 PTAMNSIMETGNTKNSALMAKKAPTMPKPQWHPPWKLYRVIS---GHLGWVRC------- 208 Query: 202 DKVVKIQLHPTHPWLVTADANDRVSVWD 285 I + P + W VT A+ + +WD Sbjct: 209 -----IAVEPGNQWFVTGSADRTIKIWD 231
>PRP46_ASHGO (Q75BY3) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing| protein 46) Length = 425 Score = 29.6 bits (65), Expect = 3.2 Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 2/83 (2%) Frame = +1 Query: 178 LRAFRPTSDKVVKIQLHPTHPWLVTADANDRVSVWDWEHRQVIYEL--RAGGVDERRLVG 351 +R F T V + LHP+ +V+A + V VWD R + L G +++ R + Sbjct: 191 VRDFHGTLSGVHSVDLHPSLDLIVSAGRDSVVRVWDIRSRSCVLTLAGHRGPINKVRCLP 250 Query: 352 VKLEKLAEGETDSKGKPTEAIRG 420 V ++ TD+ K + + G Sbjct: 251 VD-PQIVSCSTDATVKLWDLVAG 272
>DPEP1_MOUSE (P31428) Dipeptidase 1 precursor (EC 3.4.13.19) (Microsomal| dipeptidase) (Renal dipeptidase) (Membrane-bound dipeptidase 1) (MBD-1) Length = 410 Score = 29.6 bits (65), Expect = 3.2 Identities = 16/47 (34%), Positives = 27/47 (57%) Frame = -3 Query: 327 ATRPQLIDHLAVLPVPDRDAVIGVGGDEPGVSGVELDLHHLVARWPE 187 AT PQ+ DHL + +G+GGD GV+ + + L V+++P+ Sbjct: 278 ATLPQVADHLDHIKKVAGAGAVGLGGDYDGVTMLPVGLED-VSKYPD 323
>DMXL2_HUMAN (Q8TDJ6) Protein DmX-like 2 (Rabconnectin-3)| Length = 3036 Score = 29.6 bits (65), Expect = 3.2 Identities = 17/82 (20%), Positives = 34/82 (41%) Frame = +1 Query: 82 PGSPDLSRSSLHPPLARYDVAAARGGHGEMLRLRAFRPTSDKVVKIQLHPTHPWLVTADA 261 P + S S +HPP + + + G + ++ V ++ HP H + +T Sbjct: 2727 PSATSYSASQVHPPSSLPWLGTGQTSTGASVLMKR---NLHNVKRMTSHPVHQYYLTGAQ 2783 Query: 262 NDRVSVWDWEHRQVIYELRAGG 327 + V +++W Q + R G Sbjct: 2784 DGSVRMFEWTRPQQLVCFRQAG 2805
>ARHG1_HUMAN (Q92888) Rho guanine nucleotide exchange factor 1 (p115-RhoGEF)| (p115RhoGEF) (115 kDa guanine nucleotide exchange factor) (Sub1.5) Length = 912 Score = 29.3 bits (64), Expect = 4.1 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Frame = -3 Query: 333 IDATRPQLIDHLAVLPVPDRDAVIGV-GGDEPGVSGVELDLHHLVARWPER 184 +DA +P D + +P RD IG G D PGVS LH L P+R Sbjct: 291 VDAEKPGATDRKGGVGMPSRDRNIGAPGQDTPGVS-----LHPLSLDSPDR 336
>PRP46_SCHPO (O13615) Pre-mRNA-splicing factor prp46 (Pre-mRNA-processing| protein 5) (Complexed with cdc5 protein 1) Length = 473 Score = 29.3 bits (64), Expect = 4.1 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = +1 Query: 208 VVKIQLHPTHPWLVTADANDRVSVWDWEHRQVIYEL 315 V ++LHPT LVTA + VWD RQ ++ L Sbjct: 250 VYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVHVL 285
>POP3_SCHPO (O74184) WD-repeat protein pop3 (WD-repeat protein wat1)| Length = 314 Score = 29.3 bits (64), Expect = 4.1 Identities = 18/72 (25%), Positives = 30/72 (41%) Frame = +1 Query: 70 ICSPPGSPDLSRSSLHPPLARYDVAAARGGHGEMLRLRAFRPTSDKVVKIQLHPTHPWLV 249 +C P L+ + +P + YD+ + + L F ++ V I H WL Sbjct: 46 LCISPDKKFLAAAG-NPHVRLYDINTS-----SQMPLMTFEGHTNNVTAIAFHCDGKWLA 99 Query: 250 TADANDRVSVWD 285 T+ + V VWD Sbjct: 100 TSSEDGTVKVWD 111
>PLRG1_RAT (Q9WUC8) Pleiotropic regulator 1| Length = 514 Score = 29.3 bits (64), Expect = 4.1 Identities = 19/77 (24%), Positives = 30/77 (38%) Frame = +1 Query: 55 NTAHLICSPPGSPDLSRSSLHPPLARYDVAAARGGHGEMLRLRAFRPTSDKVVKIQLHPT 234 NT + +P + + HPP Y V + GH +R I + P Sbjct: 171 NTKNSALMAKKAPTMPKPQWHPPWKLYRVIS---GHLGWVRC------------IAVEPG 215 Query: 235 HPWLVTADANDRVSVWD 285 + W VT A+ + +WD Sbjct: 216 NQWFVTGSADRTIKIWD 232
>PLRG1_HUMAN (O43660) Pleiotropic regulator 1| Length = 514 Score = 29.3 bits (64), Expect = 4.1 Identities = 19/77 (24%), Positives = 30/77 (38%) Frame = +1 Query: 55 NTAHLICSPPGSPDLSRSSLHPPLARYDVAAARGGHGEMLRLRAFRPTSDKVVKIQLHPT 234 NT + +P + + HPP Y V + GH +R I + P Sbjct: 171 NTKNSALMAKKAPTMPKPQWHPPWKLYRVIS---GHLGWVRC------------IAVEPG 215 Query: 235 HPWLVTADANDRVSVWD 285 + W VT A+ + +WD Sbjct: 216 NQWFVTGSADRTIKIWD 232
>TBX6_BRARE (P79742) T-box transcription factor TBX6 (T-box protein 6)| Length = 473 Score = 28.9 bits (63), Expect = 5.4 Identities = 24/85 (28%), Positives = 33/85 (38%) Frame = +1 Query: 19 SPSSVPTPASYHNTAHLICSPPGSPDLSRSSLHPPLARYDVAAARGGHGEMLRLRAFRPT 198 +PSS A++ L S S+L+ A V+ GH RL Sbjct: 290 NPSSAGGAAAHQTHTLLSLSNRHFSSPRESNLNSVCAALPVSQLSTGHTSFSRLNPQETH 349 Query: 199 SDKVVKIQLHPTHPWLVTADANDRV 273 + KIQL P HP L D + R+ Sbjct: 350 HNSRPKIQLQPPHPSLQCHDLDVRL 374
>VTS1_ASPFU (Q4WJS2) Protein vts1| Length = 602 Score = 28.9 bits (63), Expect = 5.4 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 7/55 (12%) Frame = +1 Query: 61 AHLICSPPGSPDLSRSSLHPPLARYDV-------AAARGGHGEMLRLRAFRPTSD 204 +H+I + +PD S+SSL PP + ++ +A G L R+ RP+S+ Sbjct: 3 SHIIGNRNSTPDASKSSLRPPSSSRNLGSHQLRASADMSGFPSPLSSRSIRPSSE 57
>CEBPB_CHICK (Q05826) CCAAT/enhancer-binding protein beta (C/EBP beta)| (Transcription factor NF-M) (CCR protein) Length = 328 Score = 28.9 bits (63), Expect = 5.4 Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 15/105 (14%) Frame = +1 Query: 4 VATQISPSSVPTPASYHNTAHLICSPPGSPDLSRSSLH---------PPLARYDVAAARG 156 V + + SVP+ +S + + SPPG+P+ S SS PP + Sbjct: 192 VRSYLGYQSVPSGSSGNLSTSSSSSPPGTPNPSESSKSAAGAGGYSGPPAGKNKPKKCVD 251 Query: 157 GHGEMLRLR------AFRPTSDKVVKIQLHPTHPWLVTADANDRV 273 H + +LR A R + DK L H L N+R+ Sbjct: 252 KHSDEYKLRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERL 296
>CORO7_MOUSE (Q9D2V7) Coronin-7 (70 kDa WD repeat tumor rejection antigen| homolog) Length = 922 Score = 28.9 bits (63), Expect = 5.4 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = +1 Query: 193 PTSDKVVKIQLHPTHPWLVTADANDRVSVWDWEHRQVIYELRA 321 P V +Q HPT ++ + A V VWD +Q + EL A Sbjct: 124 PEELPVEVLQFHPTVDGVLVSTAGKTVKVWDVAKQQPLTELEA 166
>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing| protein homolog) (VCP) Length = 807 Score = 28.5 bits (62), Expect = 7.1 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%) Frame = -3 Query: 351 TNQPPFIDAT--RPQLIDHLAVLPVPDRDA 268 TN+P ID RP +D L +P+PD D+ Sbjct: 627 TNRPDIIDPALLRPGRLDQLIYIPLPDEDS 656
>RFBB_MYXXA (Q50863) O-antigen export system ATP-binding protein rfbB| Length = 437 Score = 28.5 bits (62), Expect = 7.1 Identities = 17/47 (36%), Positives = 20/47 (42%) Frame = +1 Query: 139 VAAARGGHGEMLRLRAFRPTSDKVVKIQLHPTHPWLVTADANDRVSV 279 V +AR GE AFR S + P H WLV AN + V Sbjct: 378 VVSARASKGESSGRCAFRVVSATEEEGVFRPPHRWLVEPGANSQAGV 424
>KLF11_MOUSE (Q9EPF4) Krueppel-like factor 11 (Transforming growth| factor-beta-inducible early growth response protein 2) (TGFB-inducible early growth response protein 2) (TIEG-2) Length = 511 Score = 28.5 bits (62), Expect = 7.1 Identities = 16/55 (29%), Positives = 26/55 (47%) Frame = +1 Query: 40 PASYHNTAHLICSPPGSPDLSRSSLHPPLARYDVAAARGGHGEMLRLRAFRPTSD 204 P +H+ + L +PP SPDL S P++ + ++L+ A P SD Sbjct: 95 PKDFHSLSTLCITPPQSPDLVEPSTRTPVSSQVTDSKACTATDVLQSSAQWPDSD 149
>SCF_COTJA (Q90314) Kit ligand precursor (C-kit ligand) (Stem cell factor)| (SCF) (Mast cell growth factor) (MGF) Length = 287 Score = 28.5 bits (62), Expect = 7.1 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = +3 Query: 33 PNPCELPQHCTSHLLSPRISRSL 101 P LP HC HL+ P SRSL Sbjct: 59 PKMDSLPNHCWLHLMVPEFSRSL 81
>SCF_CHICK (Q09108) Kit ligand precursor (C-kit ligand) (Stem cell factor)| (SCF) (Mast cell growth factor) (MGF) Length = 287 Score = 28.5 bits (62), Expect = 7.1 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = +3 Query: 33 PNPCELPQHCTSHLLSPRISRSL 101 P LP HC HL+ P SRSL Sbjct: 59 PKMDSLPNHCWLHLMVPEFSRSL 81
>PRP17_MOUSE (Q9DC48) Pre-mRNA-splicing factor PRP17 (Cell division cycle 40| homolog) Length = 579 Score = 28.5 bits (62), Expect = 7.1 Identities = 7/36 (19%), Positives = 21/36 (58%) Frame = +1 Query: 214 KIQLHPTHPWLVTADANDRVSVWDWEHRQVIYELRA 321 ++ P ++++ D N ++++WDW+ ++ +A Sbjct: 513 QVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKA 548
>PRP17_HUMAN (O60508) Pre-mRNA-splicing factor PRP17 (hPRP17) (Cell division| cycle 40 homolog) (EH-binding protein 3) (Ehb3) Length = 579 Score = 28.5 bits (62), Expect = 7.1 Identities = 7/36 (19%), Positives = 21/36 (58%) Frame = +1 Query: 214 KIQLHPTHPWLVTADANDRVSVWDWEHRQVIYELRA 321 ++ P ++++ D N ++++WDW+ ++ +A Sbjct: 513 QVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKA 548
>KCC1_EMENI (Q00771) Calcium/calmodulin-dependent protein kinase (EC 2.7.11.17)| (CMPK) Length = 414 Score = 28.5 bits (62), Expect = 7.1 Identities = 21/63 (33%), Positives = 31/63 (49%) Frame = +1 Query: 184 AFRPTSDKVVKIQLHPTHPWLVTADANDRVSVWDWEHRQVIYELRAGGVDERRLVGVKLE 363 A RPTS++ +K HPWL A+D R ++ E+RA R G+++ Sbjct: 264 AQRPTSEEALK------HPWLKGESASD---------RDLLPEIRAYIARSRLKRGIEII 308 Query: 364 KLA 372 KLA Sbjct: 309 KLA 311
>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog| Length = 805 Score = 28.5 bits (62), Expect = 7.1 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%) Frame = -3 Query: 351 TNQPPFIDAT--RPQLIDHLAVLPVPDRDA 268 TN+P ID RP +D L +P+PD D+ Sbjct: 627 TNRPDIIDPALLRPGRLDQLIYIPLPDEDS 656
>TARA_MOUSE (Q99KW3) TRIO and F-actin-binding protein (Protein Tara)| (Trio-associated repeat on actin) Length = 2014 Score = 28.5 bits (62), Expect = 7.1 Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 9/46 (19%) Frame = +1 Query: 13 QISPSSVPTPASYHNTAH---------LICSPPGSPDLSRSSLHPP 123 Q SPS T +S HN H L +P G+P S S PP Sbjct: 636 QYSPSLATTSSSSHNPGHSSASRTSSPLHAAPRGAPQTSLESSQPP 681
>RCO1_NEUCR (P78706) Transcriptional repressor rco-1| Length = 604 Score = 28.5 bits (62), Expect = 7.1 Identities = 17/87 (19%), Positives = 36/87 (41%), Gaps = 5/87 (5%) Frame = +1 Query: 40 PASYHNTAHLICSPPGSPDLSRSSLHPPLARYDVAAARGGHGEMLR-----LRAFRPTSD 204 P + ++ + + P +L SL + ++++A RG ++ F D Sbjct: 467 PDGHKDSVYSVAFSPDGRNLVSGSLDKTIKMWELSAPRGIPSSAPPKGGRCIKTFEGHRD 526 Query: 205 KVVKIQLHPTHPWLVTADANDRVSVWD 285 V+ + L P W+++ + V WD Sbjct: 527 FVLSVALTPDSQWVLSGSKDRGVQFWD 553
>WIS1_SCHPO (P33886) Protein kinase wis1 (EC 2.7.12.2) (Protein kinase sty2)| Length = 605 Score = 28.5 bits (62), Expect = 7.1 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = +1 Query: 40 PASYHNTAHLICSPPGSPDLSRSSLHPPLARYDVAAARG 156 P S++ + +PPG DLS S+ P++ +A+ RG Sbjct: 224 PTSFNRQTRIRRAPPGKLDLSNSNPTSPVSPSSMASRRG 262
>FRI2_ARATH (Q9SRL5) Ferritin-2, chloroplast precursor (EC 1.16.3.1)| Length = 253 Score = 28.1 bits (61), Expect = 9.2 Identities = 19/67 (28%), Positives = 33/67 (49%) Frame = +1 Query: 55 NTAHLICSPPGSPDLSRSSLHPPLARYDVAAARGGHGEMLRLRAFRPTSDKVVKIQLHPT 234 N+++L+ SP GS R+ V AA+G + + L F P + +++L PT Sbjct: 28 NSSNLLFSPSGS-------------RFSVQAAKGTNTKSLTGVVFEPFEEVKKEMELVPT 74 Query: 235 HPWLVTA 255 P++ A Sbjct: 75 TPFVSLA 81
>DBP6_DEBHA (Q6BPT8) ATP-dependent RNA helicase DBP6 (EC 3.6.1.-)| Length = 679 Score = 28.1 bits (61), Expect = 9.2 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%) Frame = -3 Query: 408 LSGLSFRISFSLGEL-LKLHTNQPPFIDATRPQLIDHL 298 LS +S + S+ E +KL TN+P I +T +L+DHL Sbjct: 342 LSIVSLKNDLSIKEEGIKLQTNEPDIIVSTPGRLVDHL 379
>SPEB2_SCHPO (O42887) Putative agmatinase 2 precursor (EC 3.5.3.11) (Agmatine| ureohydrolase) (AUH) Length = 413 Score = 28.1 bits (61), Expect = 9.2 Identities = 15/73 (20%), Positives = 31/73 (42%) Frame = +1 Query: 115 HPPLARYDVAAARGGHGEMLRLRAFRPTSDKVVKIQLHPTHPWLVTADANDRVSVWDWEH 294 H P AR+ R + +R F P+ + ++P W D D + V +++ Sbjct: 104 HRPGARFGPKGIRSASSRQMAIRGFNPS------LNVNPYESWAKILDCGD-IPVSSYDN 156 Query: 295 RQVIYELRAGGVD 333 + + ++ G +D Sbjct: 157 QLAVRQMTEGYID 169
>VTS1_EMENI (Q5BGC4) Protein vts1| Length = 611 Score = 28.1 bits (61), Expect = 9.2 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 7/55 (12%) Frame = +1 Query: 61 AHLICSPPGSPDLSRSSLHPPLARYDVA-------AARGGHGEMLRLRAFRPTSD 204 +H+I + +P+ S+SSL PP + ++A A G L R+ RP S+ Sbjct: 3 SHIIGNRNSTPEASKSSLRPPSSSRNLATHQLRASADMSGFPSPLSSRSIRPASE 57 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.133 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,942,373 Number of Sequences: 219361 Number of extensions: 1030507 Number of successful extensions: 4378 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 4023 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4377 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
