Clone Name | bastl25h08 |
---|---|
Clone Library Name | barley_pub |
>gb|AC165962.4| Mus musculus BAC clone RP23-362B7 from chromosome 17, complete sequence Length = 179745 Score = 44.1 bits (22), Expect = 0.15 Identities = 22/22 (100%) Strand = Plus / Minus Query: 20 cccttttccttttctttccccc 41 |||||||||||||||||||||| Sbjct: 58092 cccttttccttttctttccccc 58071
>gb|AC125544.4| Mus musculus BAC clone RP23-364A24 from chromosome 17, complete sequence Length = 159298 Score = 44.1 bits (22), Expect = 0.15 Identities = 22/22 (100%) Strand = Plus / Plus Query: 20 cccttttccttttctttccccc 41 |||||||||||||||||||||| Sbjct: 67153 cccttttccttttctttccccc 67174
>ref|XM_518320.1| PREDICTED: Pan troglodytes similar to HLA-F protein (LOC462529), mRNA Length = 2346 Score = 42.1 bits (21), Expect = 0.61 Identities = 24/25 (96%) Strand = Plus / Minus Query: 12 caaagatacccttttccttttcttt 36 |||||||| |||||||||||||||| Sbjct: 295 caaagatatccttttccttttcttt 271
>ref|XM_987811.1| PREDICTED: Mus musculus similar to MLCK protein (LOC676159), mRNA Length = 3134 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ccttttccttttctttcccc 40 |||||||||||||||||||| Sbjct: 1705 ccttttccttttctttcccc 1686
>gb|AC079218.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-382G13, complete sequence Length = 142667 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 cttttccttttctttccccc 41 |||||||||||||||||||| Sbjct: 58602 cttttccttttctttccccc 58583
>gb|AC144402.2| Atelerix albiventris clone LBNL4-89B6, complete sequence Length = 161430 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cttttccttttctttccccc 41 |||||||||||||||||||| Sbjct: 73597 cttttccttttctttccccc 73616
>emb|BX005354.11| Zebrafish DNA sequence from clone DKEY-49L7, complete sequence Length = 149165 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 gatacccttttccttttctt 35 |||||||||||||||||||| Sbjct: 69190 gatacccttttccttttctt 69209
>gb|AY245219.1| Vibrio fluvialis strain ZSU011 16S ribosomal RNA gene, partial sequence; tRNA-Glu, tRNA-Lys, and tRNA-Val genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 689 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cccacattatttgatttcct 58 |||||||||||||||||||| Sbjct: 261 cccacattatttgatttcct 242
>gb|AY245215.1| Vibrio fluvialis strain CGMCC1.1608 16S ribosomal RNA gene, partial sequence; tRNA-Glu, tRNA-Lys, and tRNA-Val genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 689 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cccacattatttgatttcct 58 |||||||||||||||||||| Sbjct: 261 cccacattatttgatttcct 242
>emb|BX296527.6| Zebrafish DNA sequence from clone DKEYP-32C3 in linkage group 2, complete sequence Length = 185706 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 gatacccttttccttttctt 35 |||||||||||||||||||| Sbjct: 179219 gatacccttttccttttctt 179238
>gb|AF413006.1| Vibrio fluvialis 16S-23S ribosomal RNA intergenic spacer, partial sequence; tRNA-Glu and tRNA-Val genes, complete sequence Length = 679 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cccacattatttgatttcct 58 |||||||||||||||||||| Sbjct: 256 cccacattatttgatttcct 237
>emb|BX005176.8| Zebrafish DNA sequence from clone CH211-106N13 in linkage group 2, complete sequence Length = 171996 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 gatacccttttccttttctt 35 |||||||||||||||||||| Sbjct: 5138 gatacccttttccttttctt 5157
>dbj|AP005241.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-502P1, complete sequence Length = 183466 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ccttttccttttctttcccc 40 |||||||||||||||||||| Sbjct: 120015 ccttttccttttctttcccc 119996
>dbj|AP005130.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-168H23, complete sequence Length = 181276 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ccttttccttttctttcccc 40 |||||||||||||||||||| Sbjct: 4286 ccttttccttttctttcccc 4267
>gb|AC002038.1|HUAC002038 Homo sapiens chromosome 2 clone 101B6 map 2p11, complete sequence Length = 161973 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 cccttttccttttctttcc 38 ||||||||||||||||||| Sbjct: 9648 cccttttccttttctttcc 9630
>gb|BT018370.1| Zea mays clone EL01N0305G08.d mRNA sequence Length = 1585 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 ttttccttttctttccccc 41 ||||||||||||||||||| Sbjct: 1395 ttttccttttctttccccc 1377
>gb|AC140329.3| Mus musculus BAC clone RP23-404O10 from chromosome 14, complete sequence Length = 202811 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 ccttttccttttctttccc 39 ||||||||||||||||||| Sbjct: 74042 ccttttccttttctttccc 74024
>gb|AC183678.2| Pan troglodytes BAC clone CH251-485O9 from chromosome 22, complete sequence Length = 209755 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 cccttttccttttctttcc 38 ||||||||||||||||||| Sbjct: 32080 cccttttccttttctttcc 32098
>gb|AC122326.4| Mus musculus BAC clone RP23-337J18 from chromosome 10, complete sequence Length = 236165 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 ccttttccttttctttccc 39 ||||||||||||||||||| Sbjct: 191765 ccttttccttttctttccc 191747
>gb|AC109151.9| Mus musculus chromosome 1, clone RP24-530O9, complete sequence Length = 130025 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 19 acccttttccttttctttc 37 ||||||||||||||||||| Sbjct: 64177 acccttttccttttctttc 64195
>gb|AC134882.2| Homo sapiens BAC clone RP11-886I11 from Y, complete sequence Length = 152654 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 cccttttccttttctttcc 38 ||||||||||||||||||| Sbjct: 2758 cccttttccttttctttcc 2740
>gb|AC134879.3| Homo sapiens BAC clone RP11-295P22 from Y, complete sequence Length = 205515 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 cccttttccttttctttcc 38 ||||||||||||||||||| Sbjct: 197568 cccttttccttttctttcc 197550
>gb|AC114825.4| Mus musculus BAC clone RP24-104P22 from chromosome 3, complete sequence Length = 202237 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 ttttccttttctttccccc 41 ||||||||||||||||||| Sbjct: 115696 ttttccttttctttccccc 115714
>gb|AC140411.3| Mus musculus BAC clone RP24-93J6 from chromosome 19, complete sequence Length = 163978 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 cccttttccttttctttcc 38 ||||||||||||||||||| Sbjct: 150431 cccttttccttttctttcc 150449
>gb|AC129198.3| Mus musculus BAC clone RP24-183I4 from chromosome 15, complete sequence Length = 165791 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 ccttttccttttctttccc 39 ||||||||||||||||||| Sbjct: 152562 ccttttccttttctttccc 152580
>gb|AC004614.2| Homo sapiens PAC clone RP5-1168D11 from 7, complete sequence Length = 112456 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 25 ttccttttctttcccccacatta 47 |||||||||||| |||||||||| Sbjct: 2004 ttccttttcttttccccacatta 1982
>gb|AC099651.4| Homo sapiens BAC clone RP11-685B22 from 7, complete sequence Length = 120985 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 ttccttttctttcccccacatta 47 |||||||| |||||||||||||| Sbjct: 76544 ttccttttttttcccccacatta 76566
>gb|AC142334.1| Pan troglodytes BAC clone RP43-34J11 from 7, complete sequence Length = 168008 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 25 ttccttttctttcccccacatta 47 |||||||||||| |||||||||| Sbjct: 78798 ttccttttcttttccccacatta 78820
>gb|AC160933.3| Mus musculus BAC clone RP24-172H5 from chromosome 3, complete sequence Length = 158302 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 ttttccttttctttccccc 41 ||||||||||||||||||| Sbjct: 6330 ttttccttttctttccccc 6348
>gb|AC163208.2| Mus musculus chromosome 18, clone RP24-340O19, complete sequence Length = 203011 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 21 ccttttccttttctttcccccac 43 |||||| |||||||||||||||| Sbjct: 132599 cctttttcttttctttcccccac 132621
>gb|AC153588.11| Mus musculus 6 BAC RP23-430H2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188672 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 cccttttccttttctttcc 38 ||||||||||||||||||| Sbjct: 68067 cccttttccttttctttcc 68085
>emb|AL596137.7| Human DNA sequence from clone RP11-50E11 on chromosome 10 Contains the 5' end of the gene for MOB protein, a novel pseudogene (FLJ10539), a novel gene (FLJ12320) and a CpG island, complete sequence Length = 51479 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 18 tacccttttccttttctttcccc 40 ||||||||||||| ||||||||| Sbjct: 17842 tacccttttccttctctttcccc 17820
>emb|AL359266.14| Human DNA sequence from clone RP11-26P21 on chromosome 13 Contains the 3' end of the DIAPH3 gene for diaphanous homolog 3 (Drosophila), complete sequence Length = 206407 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 18 tacccttttccttttctttcccc 40 |||||||||||||| |||||||| Sbjct: 104388 tacccttttcctttcctttcccc 104366
>gb|AC105071.7| Mus musculus, clone RP23-277C24, complete sequence Length = 199946 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 28 cttttctttcccccacattattt 50 ||||| ||||||||||||||||| Sbjct: 90053 cttttttttcccccacattattt 90075
>emb|AL162718.15| Human DNA sequence from clone RP11-274H24 on chromosome 6, complete sequence Length = 178872 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 ttttccttttctttccccc 41 ||||||||||||||||||| Sbjct: 115829 ttttccttttctttccccc 115811
>emb|AL159997.14| Human DNA sequence from clone RP11-479K20 on chromosome 9q34.12-34.3 Contains the 3' end of the gene for netrin G2 protein (KIAA1857), gene KIAA0625 (FLJ10594) and a CpG island, complete sequence Length = 107076 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 cttttccttttctttcccc 40 ||||||||||||||||||| Sbjct: 22971 cttttccttttctttcccc 22989
>gb|AC091514.2| Rattus norvegicus strain Brown Norway clone RP31-223K12, complete sequence Length = 148370 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 cttttccttttctttcccc 40 ||||||||||||||||||| Sbjct: 65217 cttttccttttctttcccc 65235
>emb|AL133173.20| Human DNA sequence from clone RP11-453N3 on chromosome 10 Contains a RING finger protein 18 (RNF18) pseudogene, an actin-related protein 3 homolog (yeast) (ACTR3) pseudogene, a poly(A) cytoplasmic binding protein 3 (PABPC3) pseudogene, a gene for a novel protein similar to ATP-binding cassette sub-family D (ALD) member 1 (ABCD1), two novel genes and two CpG islands, complete sequence Length = 206192 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 cccttttccttttctttcc 38 ||||||||||||||||||| Sbjct: 85837 cccttttccttttctttcc 85819
>gb|AC158931.4| Mus musculus chromosome 1, clone RP23-3H19, complete sequence Length = 212994 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 19 acccttttccttttctttc 37 ||||||||||||||||||| Sbjct: 170849 acccttttccttttctttc 170867
>gb|AC133916.2| Homo sapiens chromosome 16 clone RP11-135K11, complete sequence Length = 169142 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 cccttttccttttctttcc 38 ||||||||||||||||||| Sbjct: 12344 cccttttccttttctttcc 12326
>emb|BX119319.7| Zebrafish DNA sequence from clone CH211-195K14 in linkage group 5, complete sequence Length = 184366 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 atacccttttccttttctt 35 ||||||||||||||||||| Sbjct: 162156 atacccttttccttttctt 162174
>gb|AC138915.2| Homo sapiens chromosome 16 clone RP11-626K17, complete sequence Length = 180893 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 cccttttccttttctttcc 38 ||||||||||||||||||| Sbjct: 33845 cccttttccttttctttcc 33827
>gb|AC102791.15| Mus musculus chromosome 3, clone RP23-278C9, complete sequence Length = 188017 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 18 tacccttttccttttctttcccc 40 |||| |||||||||||||||||| Sbjct: 105183 taccgttttccttttctttcccc 105205
>gb|AC162293.4| Mus musculus chromosome 3, clone RP24-172J1, complete sequence Length = 171700 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 18 tacccttttccttttctttcccc 40 |||| |||||||||||||||||| Sbjct: 124008 taccgttttccttttctttcccc 124030
>emb|AL662810.16| Mouse DNA sequence from clone RP23-42P24 on chromosome 11 Contains a novel gene (9630006B20Rik), a novel gene, a ribosomal protein S12 (Rps12) pseudogene, a novel gene (LOC268391), the Bcl11a gene for B-cell CLL/lymphoma 11A (zinc finger protein), two novel genes and three CpG islands, complete sequence Length = 267641 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 ccttttccttttctttccc 39 ||||||||||||||||||| Sbjct: 253037 ccttttccttttctttccc 253055
>emb|BX950860.8| Zebrafish DNA sequence from clone CH211-93B22 in linkage group 5, complete sequence Length = 85209 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 atacccttttccttttctt 35 ||||||||||||||||||| Sbjct: 61364 atacccttttccttttctt 61382
>gb|AC131384.1| Homo sapiens chromosome 16 clone RP11-465L11, complete sequence Length = 92474 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 ccttttccttttctttccc 39 ||||||||||||||||||| Sbjct: 2498 ccttttccttttctttccc 2516
>emb|BX927179.9| Zebrafish DNA sequence from clone CH211-194N20 in linkage group 5, complete sequence Length = 121960 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 cccttttccttttctttcc 38 ||||||||||||||||||| Sbjct: 65013 cccttttccttttctttcc 65031
>gb|AC109352.3| Homo sapiens BAC clone RP11-489P20 from 4, complete sequence Length = 157443 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 ttttccttttctttccccc 41 ||||||||||||||||||| Sbjct: 81604 ttttccttttctttccccc 81622
>emb|BX663525.6| Zebrafish DNA sequence from clone DKEY-97A13 in linkage group 2, complete sequence Length = 261927 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 atacccttttccttttctt 35 ||||||||||||||||||| Sbjct: 214983 atacccttttccttttctt 215001
>gb|AC125392.15| Pan troglodytes clone rp43-143k16, complete sequence Length = 163615 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 cccttttccttttctttcc 38 ||||||||||||||||||| Sbjct: 106764 cccttttccttttctttcc 106782
>gb|AC123980.19| Pan troglodytes clone rp43-118j16, complete sequence Length = 145016 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 cccttttccttttctttcc 38 ||||||||||||||||||| Sbjct: 62785 cccttttccttttctttcc 62767
>gb|AC103969.4| Homo sapiens chromosome 15, clone RP11-876F5, complete sequence Length = 121054 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 ccttttccttttctttccc 39 ||||||||||||||||||| Sbjct: 91868 ccttttccttttctttccc 91850
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 Length = 2005935 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 ttttccttttctttccccc 41 ||||||||||||||||||| Sbjct: 757220 ttttccttttctttccccc 757238
>gb|AC012060.12| Homo sapiens chromosome , clone RP11-19A24, complete sequence Length = 164179 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 ccttttccttttctttccc 39 ||||||||||||||||||| Sbjct: 143876 ccttttccttttctttccc 143894
>gb|AC093555.2| Homo sapiens chromosome 3 clone RP11-30A19, complete sequence Length = 163790 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 ccttttccttttctttccc 39 ||||||||||||||||||| Sbjct: 11534 ccttttccttttctttccc 11552
>gb|AC020760.6| Homo sapiens chromosome 16 clone RP11-151C19, complete sequence Length = 188872 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 cccttttccttttctttcc 38 ||||||||||||||||||| Sbjct: 143502 cccttttccttttctttcc 143484
>gb|AC080121.4| Homo sapiens chromosome 15, clone RP13-500A21, complete sequence Length = 154987 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 ccttttccttttctttccc 39 ||||||||||||||||||| Sbjct: 130451 ccttttccttttctttccc 130469
>gb|DQ277520.1| Drosophila melanogaster isolate sim locus 221 genomic sequence Length = 1047 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 24 tttccttttctttcccccacatt 46 |||||||||||||||||| |||| Sbjct: 807 tttccttttctttcccccccatt 785
>dbj|AK156490.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830027A04 product:unclassifiable, full insert sequence Length = 3879 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 ccttttccttttctttccc 39 ||||||||||||||||||| Sbjct: 489 ccttttccttttctttccc 507
>gb|AC083826.7| Homo sapiens BAC clone RP11-289C17 from 4, complete sequence Length = 129240 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 cccttttccttttctttcc 38 ||||||||||||||||||| Sbjct: 69543 cccttttccttttctttcc 69561
>gb|BC102270.1| Bos taurus similar to Pin2-interacting protein X1 (TRF1-interacting protein 1) (Liver-related putative tumor suppressor) (67-11-3 protein), mRNA (cDNA clone MGC:127183 IMAGE:7944576), complete cds Length = 1287 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 cccttttccttttctttcc 38 ||||||||||||||||||| Sbjct: 968 cccttttccttttctttcc 950
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 36 tcccccacattatttgatttcct 58 |||||||||||| |||||||||| Sbjct: 1390325 tcccccacattagttgatttcct 1390347
>gb|AC092137.3| Homo sapiens chromosome 16 clone RP11-344H15, complete sequence Length = 184891 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 ccttttccttttctttccc 39 ||||||||||||||||||| Sbjct: 139096 ccttttccttttctttccc 139078
>gb|AC009091.9| Homo sapiens chromosome 16 clone RP11-408D2, complete sequence Length = 156273 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 cccttttccttttctttcc 38 ||||||||||||||||||| Sbjct: 46110 cccttttccttttctttcc 46128
>gb|AC134305.3| Homo sapiens chromosome 16 clone RP11-105I8, complete sequence Length = 165873 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 cccttttccttttctttcc 38 ||||||||||||||||||| Sbjct: 27167 cccttttccttttctttcc 27149
>gb|AC154787.2| Mus musculus BAC clone RP24-468J5 from chromosome 17, complete sequence Length = 217844 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 ttttccttttctttccccc 41 ||||||||||||||||||| Sbjct: 94450 ttttccttttctttccccc 94432
>gb|AC091489.4| Homo sapiens chromosome 16 clone RP11-164A6, complete sequence Length = 150214 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 ccttttccttttctttccc 39 ||||||||||||||||||| Sbjct: 53664 ccttttccttttctttccc 53646
>gb|AC126763.4| Homo sapiens chromosome 16 clone RP11-1390J18, complete sequence Length = 187721 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 ccttttccttttctttccc 39 ||||||||||||||||||| Sbjct: 162046 ccttttccttttctttccc 162064
>gb|AC034151.6| Homo sapiens BAC clone RP11-168J1 from 2, complete sequence Length = 157666 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 cccttttccttttctttcc 38 ||||||||||||||||||| Sbjct: 10455 cccttttccttttctttcc 10473
>gb|AC128677.4| Homo sapiens BAC clone RP11-271A22 from 2, complete sequence Length = 158087 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 cccttttccttttctttcc 38 ||||||||||||||||||| Sbjct: 31024 cccttttccttttctttcc 31042
>gb|AC048346.13| Homo sapiens 3 BAC RP11-13L2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165544 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 160 agctaccaccacaactctttcac 182 ||||||||||| ||||||||||| Sbjct: 24289 agctaccaccataactctttcac 24267
>gb|AC092403.4| Gallus gallus clone WAG-100N11, complete sequence Length = 144369 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 cccttttccttttctttcc 38 ||||||||||||||||||| Sbjct: 108482 cccttttccttttctttcc 108464
>emb|BX548032.5| Zebrafish DNA sequence from clone CH211-145G9 in linkage group 17, complete sequence Length = 161483 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 19 acccttttccttttctttc 37 ||||||||||||||||||| Sbjct: 161347 acccttttccttttctttc 161329
>gb|AC141636.4| Mus musculus BAC clone RP23-471D17 from chromosome 19, complete sequence Length = 165424 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 cccttttccttttctttcc 38 ||||||||||||||||||| Sbjct: 23895 cccttttccttttctttcc 23913
>dbj|AB181926.1| Bifidobacterium longum lnbp gene for Lacto-N-biose phosphorylase, complete cds Length = 2335 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 143 ccgtatccgattcggcgag 161 ||||||||||||||||||| Sbjct: 281 ccgtatccgattcggcgag 263
>gb|AC010849.3|AC010849 Homo sapiens chromosome 14 clone CTD-2540C19 map 14q31, complete sequence Length = 151659 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 169 cacaactctttcacgcaac 187 ||||||||||||||||||| Sbjct: 118709 cacaactctttcacgcaac 118727
>gb|AC137976.13| Mus musculus chromosome 8, clone RP23-262K12, complete sequence Length = 238720 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 ccttttccttttctttccc 39 ||||||||||||||||||| Sbjct: 199638 ccttttccttttctttccc 199656
>emb|AL672107.5| Zebrafish DNA sequence from clone BUSM1-84N18 in linkage group 1 Contains a novel lambda recombinase like pseudogene, a putative novel gene and two CpG islands, complete sequence Length = 106684 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 31 ttctttcccccacattatt 49 ||||||||||||||||||| Sbjct: 94195 ttctttcccccacattatt 94177
>gb|AC103351.11| Mus musculus chromosome 18, clone RP23-406A11, complete sequence Length = 174352 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 21 ccttttccttttctttcccccac 43 |||||| |||||||||||||||| Sbjct: 97507 cctttttcttttctttcccccac 97485
>gb|AC108782.9| Mus musculus chromosome 8, clone RP23-350C11, complete sequence Length = 221428 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 ccttttccttttctttccc 39 ||||||||||||||||||| Sbjct: 77906 ccttttccttttctttccc 77924
>dbj|AP003120.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-657K20, complete sequence Length = 189499 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 ccttttccttttctttccc 39 ||||||||||||||||||| Sbjct: 7727 ccttttccttttctttccc 7745
>gb|AC162939.6| Mus musculus BAC clone RP23-97G12 from chromosome 10, complete sequence Length = 247228 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 ccttttccttttctttccc 39 ||||||||||||||||||| Sbjct: 185366 ccttttccttttctttccc 185384
>emb|Z84492.2|HSLUCA11 Human DNA sequence from clone XXcos-11 on chromosome 3 Contains the 3' part of the gene for calcium channel, voltage-dependent, L type, alpha 2D subunit (KIAA0558) and the first exon of the gene for PL6 protein (deleted in Small Cell Lung Carcinoma). Contains ESTs, GSSs and a putative CpG island, complete sequence Length = 27844 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 25 ttccttttctttcccccac 43 ||||||||||||||||||| Sbjct: 675 ttccttttctttcccccac 657
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 36 tcccccacattatttgatttcct 58 |||||||||||| |||||||||| Sbjct: 1390325 tcccccacattagttgatttcct 1390347
>emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157453 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 36 tcccccacattatttgatttcct 58 |||||||||||| |||||||||| Sbjct: 38844 tcccccacattagttgatttcct 38822
>emb|CT010565.14| Mouse DNA sequence from clone RP23-263E11 on chromosome 16, complete sequence Length = 200242 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 ttttccttttctttccccc 41 ||||||||||||||||||| Sbjct: 172074 ttttccttttctttccccc 172056
>emb|AL805976.12| Mouse DNA sequence from clone RP23-34H1 on chromosome 4, complete sequence Length = 192098 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 cccttttccttttctttcc 38 ||||||||||||||||||| Sbjct: 21439 cccttttccttttctttcc 21457
>emb|AL691454.15| Mouse DNA sequence from clone RP23-423P8 on chromosome 4 Contains the 3' end of the Astn2 gene for astrotactin 2 and the 3' end of the Pappa gene for pregnancy-associated plasma protein A, complete sequence Length = 204466 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 cttttccttttctttcccc 40 ||||||||||||||||||| Sbjct: 13762 cttttccttttctttcccc 13780
>gb|AC087782.34| Mus musculus strain C57BL/6J chromosome 16 clone rp23-81d13, complete sequence Length = 177250 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 ccttttccttttctttccc 39 ||||||||||||||||||| Sbjct: 86238 ccttttccttttctttccc 86220
>ref|NM_001034553.1| Bos taurus similar to Pin2-interacting protein X1 (TRF1-interacting protein 1) (Liver-related putative tumor suppressor) (67-11-3 protein) (MGC127183), mRNA Length = 1287 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 cccttttccttttctttcc 38 ||||||||||||||||||| Sbjct: 968 cccttttccttttctttcc 950
>emb|AL772393.11| Mouse DNA sequence from clone RP23-398D18 on chromosome 4, complete sequence Length = 207495 Score = 38.2 bits (19), Expect = 9.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 16 gatacccttttccttttctttcc 38 |||| |||||||||||||||||| Sbjct: 94107 gatatccttttccttttctttcc 94129
>emb|AL732454.12| Mouse DNA sequence from clone RP23-289P8 on chromosome X, complete sequence Length = 179447 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 ttttccttttctttccccc 41 ||||||||||||||||||| Sbjct: 174038 ttttccttttctttccccc 174020
>dbj|AP000546.1| Homo sapiens genomic DNA, chromosome 22q11.2, Cat Eye Syndrome region, clone:c18E3 Length = 39984 Score = 38.2 bits (19), Expect = 9.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 cccttttccttttctttcc 38 ||||||||||||||||||| Sbjct: 33623 cccttttccttttctttcc 33641 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,495,913 Number of Sequences: 3902068 Number of extensions: 1495913 Number of successful extensions: 149214 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 94 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 148783 Number of HSP's gapped (non-prelim): 431 length of query: 191 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 169 effective length of database: 17,147,199,772 effective search space: 2897876761468 effective search space used: 2897876761468 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)