ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl25h07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC009709.7|AC009709 Homo sapiens chromosome 18, clone RP11-31... 44 0.29
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.29
3dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.29
4gb|AC153563.3| Mus musculus 10 BAC RP23-455D21 (Roswell Park Can... 44 0.29
5gb|AY596292.1| Haloarcula marismortui ATCC 43049 plasmid pNG300,... 42 1.2
6ref|XM_582196.2| PREDICTED: Bos taurus similar to formin binding... 42 1.2
7gb|AC011596.27| Homo sapiens 12 BAC RP11-117B7 (Roswell Park Can... 42 1.2
8gb|AC103636.11| Mus musculus chromosome 5, clone RP24-373A18, co... 40 4.6
9ref|NM_101720.3| Arabidopsis thaliana unknown protein AT1G18620 ... 40 4.6
10gb|AC121142.12| Mus musculus chromosome 10, clone RP23-479G23, c... 40 4.6
11gb|AC118017.15| Mus musculus chromosome 7, clone RP23-457C1, com... 40 4.6
12ref|NM_023403.2| Mus musculus mesoderm development candiate 2 (M... 40 4.6
13gb|AC140925.4| Mus musculus BAC clone RP24-140B17 from chromosom... 40 4.6
14gb|AC121276.9| Mus musculus chromosome 1, clone RP24-249B16, com... 40 4.6
15gb|AC132083.3| Mus musculus BAC clone RP24-540G23 from chromosom... 40 4.6
16gb|AC026238.2| Arabidopsis thaliana chromosome I BAC F25I16 geno... 40 4.6
17gb|BC014742.1| Mus musculus mesoderm development candiate 2, mRN... 40 4.6
18gb|BC058612.1| Mus musculus cDNA clone IMAGE:30033905, **** WARN... 40 4.6
19emb|CR478286.10| Zebrafish DNA sequence from clone CH211-196B13 ... 40 4.6
20gb|BT009669.1| Arabidopsis thaliana At1g18620 gene, complete cds 40 4.6
21ref|XM_780299.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 4.6
22ref|XM_780175.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 4.6
23gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome 40 4.6
24emb|BX538351.1| Cryptosporidium parvum chromosome 6, complete se... 40 4.6
25gb|AC106881.9| Homo sapiens BAC clone RP11-710C12 from 4, comple... 40 4.6
26gb|AY102105.1| Arabidopsis thaliana At1g18620/F25I16_13 mRNA, co... 40 4.6
27gb|AC091577.9| Homo sapiens chromosome 18, clone RP11-704J2, com... 40 4.6
28ref|XM_681842.1| PREDICTED: Danio rerio similar to Chromatin mod... 40 4.6
29ref|XM_627561.1| Cryptosporidium parvum Iowa II hypothetical pro... 40 4.6
30gb|AC154141.7| Mus musculus chromosome 7, clone RP24-343G19, com... 40 4.6
31dbj|AK046115.1| Mus musculus adult male corpora quadrigemina cDN... 40 4.6
32dbj|AK031949.1| Mus musculus adult male medulla oblongata cDNA, ... 40 4.6
33dbj|AK076773.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 4.6
34dbj|AK076760.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 4.6
35gb|AC175710.2| Mus musculus BAC clone RP24-44O16 from chromosome... 40 4.6
36gb|AC015963.8|AC015963 Homo sapiens chromosome , clone RP11-112B... 40 4.6
37dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
38gb|AC136940.2| Homo sapiens chromosome 5 clone RP11-1252I4, comp... 40 4.6
39gb|AF311213.1| Mus musculus BAC 171m12 MESDC1 (Mesdc1) and MESDC... 40 4.6
40dbj|AK181961.1| Mus musculus cDNA, clone:Y0G0120E01, strand:unsp... 40 4.6
41dbj|BS000233.1| Pan troglodytes chromosome 22 clone:CH251-445J22... 40 4.6
42emb|AL929096.5| Zebrafish DNA sequence from clone DKEY-216E9 in ... 40 4.6
43dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
44dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
45gb|U73106.1|LTU73106 Liriodendron tulipifera high-pI laccase (LA... 40 4.6
46gb|AC006552.7|AC006552 Homo sapiens chromosome 4 clone C0084L10 ... 40 4.6
47dbj|AP001748.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 4.6
48gb|AC132438.3| Mus musculus BAC clone RP23-234G15 from 3, comple... 40 4.6
49emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 40 4.6
50dbj|AP001631.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 4.6 
>gb|AC009709.7|AC009709 Homo sapiens chromosome 18, clone RP11-319O9, complete sequence
          Length = 187615

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 249    aaaaaaccaagaataaaaatat 270
              ||||||||||||||||||||||
Sbjct: 174503 aaaaaaccaagaataaaaatat 174524
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 85/106 (80%)
 Strand = Plus / Plus

                                                                            
Query: 168      acaatgtgaaatcaccgaggtgcaagaaaagtggtggtcttagagggaagaaggatatgg 227
                |||||||||||||||  ||| |||||||||  | | ||| | |||| ||||||| || ||
Sbjct: 20919550 acaatgtgaaatcactaaggcgcaagaaaaaggatagtcatggaggaaagaagggtaagg 20919609

                                                              
Query: 228      tgcaggatccacatatgaagcaaaaaaccaagaataaaaatatagc 273
                ||| ||||||||||  ||||   | || |||||| |||||||||||
Sbjct: 20919610 tgcgggatccacatgggaagggcagaagcaagaagaaaaatatagc 20919655



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 60       gttcttgttttgaggtcgtaacttctgcc 88
                ||||||||| | |||||||||||||||||
Sbjct: 20919442 gttcttgttctaaggtcgtaacttctgcc 20919470
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>dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0470G10
          Length = 145419

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 85/106 (80%)
 Strand = Plus / Plus

                                                                         
Query: 168   acaatgtgaaatcaccgaggtgcaagaaaagtggtggtcttagagggaagaaggatatgg 227
             |||||||||||||||  ||| |||||||||  | | ||| | |||| ||||||| || ||
Sbjct: 43022 acaatgtgaaatcactaaggcgcaagaaaaaggatagtcatggaggaaagaagggtaagg 43081

                                                           
Query: 228   tgcaggatccacatatgaagcaaaaaaccaagaataaaaatatagc 273
             ||| ||||||||||  ||||   | || |||||| |||||||||||
Sbjct: 43082 tgcgggatccacatgggaagggcagaagcaagaagaaaaatatagc 43127



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 60    gttcttgttttgaggtcgtaacttctgcc 88
             ||||||||| | |||||||||||||||||
Sbjct: 42914 gttcttgttctaaggtcgtaacttctgcc 42942
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>gb|AC153563.3| Mus musculus 10 BAC RP23-455D21 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 171018

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 261   ataaaaatatagcagatgacat 282
             ||||||||||||||||||||||
Sbjct: 96025 ataaaaatatagcagatgacat 96004
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>gb|AY596292.1| Haloarcula marismortui ATCC 43049 plasmid pNG300, complete sequence
          Length = 39521

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 126   agggtccgtctgtaactggca 146
             |||||||||||||||||||||
Sbjct: 20482 agggtccgtctgtaactggca 20502
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>ref|XM_582196.2| PREDICTED: Bos taurus similar to formin binding protein 1
           (LOC538717), mRNA
          Length = 2943

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 253 aaccaagaataaaaatatagc 273
           |||||||||||||||||||||
Sbjct: 246 aaccaagaataaaaatatagc 226
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>gb|AC011596.27| Homo sapiens 12 BAC RP11-117B7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 102500

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 107   catgaacatggctgggtgcag 127
             |||||||||||||||||||||
Sbjct: 68407 catgaacatggctgggtgcag 68387
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>gb|AC103636.11| Mus musculus chromosome 5, clone RP24-373A18, complete sequence
          Length = 185727

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 253  aaccaagaataaaaatatagcaga 276
            |||||||||||||||||| |||||
Sbjct: 5328 aaccaagaataaaaatattgcaga 5351
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>ref|NM_101720.3| Arabidopsis thaliana unknown protein AT1G18620 mRNA, complete cds
          Length = 3307

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 14   tctgatgatccatcttcact 33
            ||||||||||||||||||||
Sbjct: 2212 tctgatgatccatcttcact 2193
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>gb|AC121142.12| Mus musculus chromosome 10, clone RP23-479G23, complete sequence
          Length = 203838

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 262    taaaaatatagcagatgaca 281
              ||||||||||||||||||||
Sbjct: 166437 taaaaatatagcagatgaca 166418
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>gb|AC118017.15| Mus musculus chromosome 7, clone RP23-457C1, complete sequence
          Length = 196427

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    gttcagttcttgttttgagg 74
             ||||||||||||||||||||
Sbjct: 36445 gttcagttcttgttttgagg 36464
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>ref|NM_023403.2| Mus musculus mesoderm development candiate 2 (Mesdc2), mRNA
          Length = 4235

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 269 atagcagatgacattctcat 288
           ||||||||||||||||||||
Sbjct: 789 atagcagatgacattctcat 808
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>gb|AC140925.4| Mus musculus BAC clone RP24-140B17 from chromosome Y, complete sequence
          Length = 172606

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 248    caaaaaaccaagaataaaaa 267
              ||||||||||||||||||||
Sbjct: 122287 caaaaaaccaagaataaaaa 122306
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>gb|AC121276.9| Mus musculus chromosome 1, clone RP24-249B16, complete sequence
          Length = 212083

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 263   aaaaatatagcagatgacat 282
             ||||||||||||||||||||
Sbjct: 60671 aaaaatatagcagatgacat 60652
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>gb|AC132083.3| Mus musculus BAC clone RP24-540G23 from chromosome 5, complete sequence
          Length = 158764

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 253   aaccaagaataaaaatatagcaga 276
             |||||||||||||||||| |||||
Sbjct: 25798 aaccaagaataaaaatattgcaga 25775
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>gb|AC026238.2| Arabidopsis thaliana chromosome I BAC F25I16 genomic sequence,
            complete sequence
          Length = 44879

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 14   tctgatgatccatcttcact 33
            ||||||||||||||||||||
Sbjct: 8029 tctgatgatccatcttcact 8048
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>gb|BC014742.1| Mus musculus mesoderm development candiate 2, mRNA (cDNA clone
           MGC:25959 IMAGE:4239248), complete cds
          Length = 1876

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 269 atagcagatgacattctcat 288
           ||||||||||||||||||||
Sbjct: 767 atagcagatgacattctcat 786
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>gb|BC058612.1| Mus musculus cDNA clone IMAGE:30033905, **** WARNING: chimeric clone
            ****
          Length = 5940

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 269  atagcagatgacattctcat 288
            ||||||||||||||||||||
Sbjct: 3700 atagcagatgacattctcat 3719
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>emb|CR478286.10| Zebrafish DNA sequence from clone CH211-196B13 in linkage group 15,
             complete sequence
          Length = 188644

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    atgatccatcttcacttgtt 37
             ||||||||||||||||||||
Sbjct: 38753 atgatccatcttcacttgtt 38734
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>gb|BT009669.1| Arabidopsis thaliana At1g18620 gene, complete cds
          Length = 2937

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 14   tctgatgatccatcttcact 33
            ||||||||||||||||||||
Sbjct: 2024 tctgatgatccatcttcact 2005
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>ref|XM_780299.1| PREDICTED: Strongylocentrotus purpuratus similar to zn-finger, CCHC
            type and RNA-directed DNA polymerase  and Integrase,
            catalytic domain containing protein family member (1E419)
            (LOC580225), mRNA
          Length = 6081

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 269  atagcagatgacattctcat 288
            ||||||||||||||||||||
Sbjct: 1267 atagcagatgacattctcat 1286
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>ref|XM_780175.1| PREDICTED: Strongylocentrotus purpuratus similar to zn-finger, CCHC
            type and RNA-directed DNA polymerase  and Integrase,
            catalytic domain containing protein family member (1E419)
            (LOC580101), mRNA
          Length = 3241

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 269  atagcagatgacattctcat 288
            ||||||||||||||||||||
Sbjct: 1267 atagcagatgacattctcat 1286
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>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome
          Length = 1842899

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 16      tgatgatccatcttcacttg 35
               ||||||||||||||||||||
Sbjct: 1629297 tgatgatccatcttcacttg 1629278
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>emb|BX538351.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 2/4
          Length = 307050

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   aaaccaagaataaaaatata 271
             ||||||||||||||||||||
Sbjct: 34415 aaaccaagaataaaaatata 34396
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>gb|AC106881.9| Homo sapiens BAC clone RP11-710C12 from 4, complete sequence
          Length = 150889

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 230   caggatccacatatgaagcaaaaa 253
             |||||||||||||||||| |||||
Sbjct: 55717 caggatccacatatgaagaaaaaa 55740
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>gb|AY102105.1| Arabidopsis thaliana At1g18620/F25I16_13 mRNA, complete cds
          Length = 3274

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 14   tctgatgatccatcttcact 33
            ||||||||||||||||||||
Sbjct: 2212 tctgatgatccatcttcact 2193
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>gb|AC091577.9| Homo sapiens chromosome 18, clone RP11-704J2, complete sequence
          Length = 158840

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 255    ccaagaataaaaatatagca 274
              ||||||||||||||||||||
Sbjct: 139575 ccaagaataaaaatatagca 139556
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>ref|XM_681842.1| PREDICTED: Danio rerio similar to Chromatin modifying protein 5
           (LOC558613), mRNA
          Length = 721

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 19  tgatccatcttcacttgttt 38
           ||||||||||||||||||||
Sbjct: 438 tgatccatcttcacttgttt 419
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>ref|XM_627561.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd6_2000),
            partial mRNA
          Length = 5031

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 252  aaaccaagaataaaaatata 271
            ||||||||||||||||||||
Sbjct: 2977 aaaccaagaataaaaatata 2996
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>gb|AC154141.7| Mus musculus chromosome 7, clone RP24-343G19, complete sequence
          Length = 178391

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 269    atagcagatgacattctcat 288
              ||||||||||||||||||||
Sbjct: 144170 atagcagatgacattctcat 144151
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>dbj|AK046115.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length
            enriched library, clone:B230342M08 product:creatine
            kinase, muscle, full insert sequence
          Length = 2351

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 55   gttcagttcttgttttgagg 74
            ||||||||||||||||||||
Sbjct: 1746 gttcagttcttgttttgagg 1765
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>dbj|AK031949.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length
           enriched library, clone:6330508E21 product:mesoderm
           development candiate 2, full insert sequence
          Length = 4235

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 269 atagcagatgacattctcat 288
           ||||||||||||||||||||
Sbjct: 789 atagcagatgacattctcat 808
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>dbj|AK076773.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930444J20 product:mesoderm development
           candiate 2, full insert sequence
          Length = 1694

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 269 atagcagatgacattctcat 288
           ||||||||||||||||||||
Sbjct: 780 atagcagatgacattctcat 799
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>dbj|AK076760.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930434N17 product:mesoderm development
           candiate 2, full insert sequence
          Length = 1880

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 269 atagcagatgacattctcat 288
           ||||||||||||||||||||
Sbjct: 786 atagcagatgacattctcat 805
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>gb|AC175710.2| Mus musculus BAC clone RP24-44O16 from chromosome y, complete sequence
          Length = 185928

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   caaaaaaccaagaataaaaa 267
             ||||||||||||||||||||
Sbjct: 23317 caaaaaaccaagaataaaaa 23336
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>gb|AC015963.8|AC015963 Homo sapiens chromosome , clone RP11-112B21, complete sequence
          Length = 172657

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   ccaagaataaaaatatagca 274
             ||||||||||||||||||||
Sbjct: 71959 ccaagaataaaaatatagca 71978
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 10       cttctctgatgatccatctt 29
                ||||||||||||||||||||
Sbjct: 26391051 cttctctgatgatccatctt 26391070
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>gb|AC136940.2| Homo sapiens chromosome 5 clone RP11-1252I4, complete sequence
          Length = 184055

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 249   aaaaaaccaagaataaaaat 268
             ||||||||||||||||||||
Sbjct: 38524 aaaaaaccaagaataaaaat 38505
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>gb|AF311213.1| Mus musculus BAC 171m12 MESDC1 (Mesdc1) and MESDC2 (Mesdc2) genes,
             complete cds
          Length = 74868

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   atagcagatgacattctcat 288
             ||||||||||||||||||||
Sbjct: 50946 atagcagatgacattctcat 50965
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>dbj|AK181961.1| Mus musculus cDNA, clone:Y0G0120E01, strand:unspecified
          Length = 385

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 269 atagcagatgacattctcat 288
           ||||||||||||||||||||
Sbjct: 65  atagcagatgacattctcat 84
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>dbj|BS000233.1| Pan troglodytes chromosome 22 clone:CH251-445J22, map 22, complete
             sequences
          Length = 163962

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    acctttaaagttcagttctt 65
             ||||||||||||||||||||
Sbjct: 94744 acctttaaagttcagttctt 94725
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>emb|AL929096.5| Zebrafish DNA sequence from clone DKEY-216E9 in linkage group 17,
             complete sequence
          Length = 192592

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    tgatccatcttcacttgttt 38
             ||||||||||||||||||||
Sbjct: 66542 tgatccatcttcacttgttt 66523
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>dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1789_C07
          Length = 138944

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    cttctctgatgatccatctt 29
             ||||||||||||||||||||
Sbjct: 40603 cttctctgatgatccatctt 40622
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>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1770_H02
          Length = 170648

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     cttctctgatgatccatctt 29
              ||||||||||||||||||||
Sbjct: 120632 cttctctgatgatccatctt 120651
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>gb|U73106.1|LTU73106 Liriodendron tulipifera high-pI laccase (LAC2-4) mRNA, complete cds
          Length = 1984

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 250  aaaaaccaagaataaaaata 269
            ||||||||||||||||||||
Sbjct: 1894 aaaaaccaagaataaaaata 1875
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>gb|AC006552.7|AC006552 Homo sapiens chromosome 4 clone C0084L10 map 4p16, complete sequence
          Length = 185393

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 249    aaaaaaccaagaataaaaat 268
              ||||||||||||||||||||
Sbjct: 121979 aaaaaaccaagaataaaaat 121960
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>dbj|AP001748.1| Homo sapiens genomic DNA, chromosome 21q, section 92/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 46     acctttaaagttcagttctt 65
              ||||||||||||||||||||
Sbjct: 285510 acctttaaagttcagttctt 285491
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>gb|AC132438.3| Mus musculus BAC clone RP23-234G15 from 3, complete sequence
          Length = 180660

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 250   aaaaaccaagaataaaaata 269
             ||||||||||||||||||||
Sbjct: 33046 aaaaaccaagaataaaaata 33065
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 249    aaaaaaccaagaataaaaat 268
              ||||||||||||||||||||
Sbjct: 108205 aaaaaaccaagaataaaaat 108186
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>dbj|AP001631.1| Homo sapiens genomic DNA, chromosome 21, clone:KB2007G4, MX1-D21S171
             region, complete sequence
          Length = 148179

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    acctttaaagttcagttctt 65
             ||||||||||||||||||||
Sbjct: 89797 acctttaaagttcagttctt 89778


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,829,335
Number of Sequences: 3902068
Number of extensions: 3829335
Number of successful extensions: 75250
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75106
Number of HSP's gapped (non-prelim): 144
length of query: 346
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 324
effective length of database: 17,147,199,772
effective search space: 5555692726128
effective search space used: 5555692726128
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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