Clone Name | bastl25h06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AVP_HORVU (Q06572) Pyrophosphate-energized vacuolar membrane pro... | 50 | 2e-06 | 2 | AVP_PHAAU (P21616) Pyrophosphate-energized vacuolar membrane pro... | 40 | 0.002 | 3 | AVP1_ARATH (P31414) Pyrophosphate-energized vacuolar membrane pr... | 37 | 0.015 |
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>AVP_HORVU (Q06572) Pyrophosphate-energized vacuolar membrane proton pump (EC| 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) Length = 762 Score = 50.1 bits (118), Expect = 2e-06 Identities = 24/24 (100%), Positives = 24/24 (100%) Frame = +2 Query: 101 MAILGELGTEILIPVCGVIGIVFA 172 MAILGELGTEILIPVCGVIGIVFA Sbjct: 1 MAILGELGTEILIPVCGVIGIVFA 24
>AVP_PHAAU (P21616) Pyrophosphate-energized vacuolar membrane proton pump (EC| 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) (Vacuolar H(+)-pyrophosphatase) Length = 764 Score = 40.0 bits (92), Expect = 0.002 Identities = 19/23 (82%), Positives = 20/23 (86%) Frame = +2 Query: 104 AILGELGTEILIPVCGVIGIVFA 172 AIL +LGTEILIPVC VIGI FA Sbjct: 3 AILPDLGTEILIPVCAVIGIAFA 25
>AVP1_ARATH (P31414) Pyrophosphate-energized vacuolar membrane proton pump 1| (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase 1) (H(+)-PPase 1) (Vacuolar proton pyrophosphatase 1) (Vacuolar proton pyrophosphatase 3) Length = 770 Score = 37.0 bits (84), Expect = 0.015 Identities = 16/27 (59%), Positives = 21/27 (77%) Frame = +2 Query: 92 LTAMAILGELGTEILIPVCGVIGIVFA 172 + A A+L EL TEIL+P+C VIGI F+ Sbjct: 1 MVAPALLPELWTEILVPICAVIGIAFS 27 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.313 0.138 0.445 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,064,761 Number of Sequences: 219361 Number of extensions: 90167 Number of successful extensions: 154 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 153 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 154 length of database: 80,573,946 effective HSP length: 33 effective length of database: 73,335,033 effective search space used: 1760040792 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)