>WDR43_HUMAN (Q15061) WD-repeat protein 43|
          Length = 720

 Score = 32.3 bits (72), Expect = 0.49
 Identities = 18/58 (31%), Positives = 26/58 (44%)
 Frame = -1

Query: 227 SVSLRASTRVSSGFAPLRHSSPSFGSRQACSNSNPSQKIRVGQRCGP*GPPARQLPCA 54
           ++ LR    V  G AP R  +P+ G  + CS +  +     G  C P  P    +PCA
Sbjct: 8   ALQLRDCACVGEGAAPPRAGAPAHGRTRGCSGARAAMAAGGGGSCDPLAPAG--VPCA 63

>TTC15_HUMAN (Q8WVT3) Tetratricopeptide repeat protein 15 (TPR repeat protein|
           15)
          Length = 735

 Score = 32.0 bits (71), Expect = 0.64
 Identities = 16/43 (37%), Positives = 19/43 (44%)
 Frame = -1

Query: 236 ICTSVSLRASTRVSSGFAPLRHSSPSFGSRQACSNSNPSQKIR 108
           +CT  S RA      GF P    SPSFG     S   P Q ++
Sbjct: 159 VCTIFSQRAPPASGDGFEPQMVKSPSFGGASEASARTPPQVVQ 201

>GLI4_XENLA (Q91661) Zinc finger protein GLI4 (Neural-specific DNA-binding|
           protein xGLI4) (xGLI-4)
          Length = 1361

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
 Frame = -1

Query: 239 TICTSVSLRASTRVSSGFAPLRHSSPSFGSRQ--ACSNSNPS 120
           ++  ++S + S   S G  PL H SP+F SRQ  A +++NP+
Sbjct: 172 SLSAALSQQRSLSSSFGHTPLLHPSPTFASRQQGALTSANPA 213

>LPXD_BORPE (Q7VYC0) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase|
           (EC 2.3.1.-)
          Length = 363

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 20/51 (39%), Positives = 26/51 (50%)
 Frame = -2

Query: 175 GIVHHLSGPDRRAPTRTLHRRSGSASGAAREGLPLVSFLAHPRFQNPSTRT 23
           G+  HLS PD     R   R  G+ S A  E    +SFL++PR+QN    T
Sbjct: 24  GLDWHLSAPDAADLPRI--RGIGTLSSAGNEE---ISFLSNPRYQNQLATT 69

>LPXD_BORPA (Q7WA50) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase|
           (EC 2.3.1.-)
          Length = 363

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 20/51 (39%), Positives = 26/51 (50%)
 Frame = -2

Query: 175 GIVHHLSGPDRRAPTRTLHRRSGSASGAAREGLPLVSFLAHPRFQNPSTRT 23
           G+  HLS PD     R   R  G+ S A  E    +SFL++PR+QN    T
Sbjct: 24  GLDWHLSAPDAADLPRI--RGIGTLSSAGNEE---ISFLSNPRYQNQLATT 69

>LPXD_BORBR (Q7WJ84) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase|
           (EC 2.3.1.-)
          Length = 363

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 20/51 (39%), Positives = 26/51 (50%)
 Frame = -2

Query: 175 GIVHHLSGPDRRAPTRTLHRRSGSASGAAREGLPLVSFLAHPRFQNPSTRT 23
           G+  HLS PD     R   R  G+ S A  E    +SFL++PR+QN    T
Sbjct: 24  GLDWHLSAPDAADLPRI--RGIGTLSSAGSEE---ISFLSNPRYQNQLATT 69

>MED4_MOUSE (Q9CQA5) Mediator complex subunit 4 (Mediator of RNA polymerase II|
           transcription subunit 4)
          Length = 270

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = -3

Query: 309 GNFGGNQLLDGSIS--LSPLYPSQTNDLHVSIASSLHQSFLWLRP 181
           G+  G+ L  G +   L+P YP Q+ND+ V++    H S   L P
Sbjct: 200 GHLPGDALAAGRLPDVLAPQYPWQSNDMSVNMLPPNHSSDFLLEP 244

>Y309_HALSA (Q9HSB8) Putative aldolase Vng0309c (EC 4.2.1.-)|
          Length = 265

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 178 SGIVHHLSGPDRRAPTRTLHRRSGSASGAAREGLPLVSF 62
           +G + HL+      P +T  RR+G+   A R G   VSF
Sbjct: 71  AGYIVHLNASTTLGPDQTDKRRTGTVEDAVRAGADAVSF 109

>INSM1_MOUSE (Q63ZV0) Insulinoma-associated protein 1 (Zinc finger protein IA-1)|
          Length = 521

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 18/52 (34%), Positives = 22/52 (42%)
 Frame = -2

Query: 232 ARQYRFEPPPEFPLASPRSGIVHHLSGPDRRAPTRTLHRRSGSASGAAREGL 77
           A Q +  PPP  P   P   I+   +GPD +AP       SG    A   GL
Sbjct: 398 ALQAKGAPPPPPPPPPPAEDILAFYAGPDEKAP----QEASGDGEAAGVLGL 445

>BRE1_YEAST (Q07457) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-) (Brefeldin|
           A-sensitivity protein 1)
          Length = 700

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = +1

Query: 133 LEHACRDPKDGELCLSGAKPEETLVEARSDTDVQIV 240
           +E  C D  + +LC   A+ +ETL+  RSD+ ++++
Sbjct: 80  IETFCTDANEKQLCREIAQGDETLIVQRSDSFMKLL 115

>PTP10_DROME (P35992) Tyrosine-protein phosphatase 10D precursor (EC 3.1.3.48)|
           (Receptor-linked protein-tyrosine phosphatase 10D)
           (DPTP10D)
          Length = 1631

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
 Frame = -3

Query: 381 RCVPNA-FNHWLYLIELVMGSSYPEGNFGGNQLLDGSISLSPLYPSQTNDLHVSIASSLH 205
           R +P   +N WLY             NF  +  L  +++++   P   ++L V + S  +
Sbjct: 91  RALPGTKYNFWLYYT-----------NFTHHDWLTWTVTITTA-PDPPSNLSVQVRSGKN 138

Query: 204 QSFLWLRPAQA*FTIFRV 151
              LW  P Q  +T F++
Sbjct: 139 AIILWSPPTQGSYTAFKI 156

>ZN469_HUMAN (Q96JG9) Zinc finger protein 469 (Fragment)|
          Length = 2469

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 16/69 (23%), Positives = 28/69 (40%)
 Frame = -1

Query: 260 PYTQVRRTICTSVSLRASTRVSSGFAPLRHSSPSFGSRQACSNSNPSQKIRVGQRCGP*G 81
           P +  R ++  +++   S   S G  P R SSP        +  +P+  +     C P  
Sbjct: 574 PPSPNRESLALALTAAHSRSGSEGRTPERASSPGLNKPLLATGDSPAPSVGDLAACAPSP 633

Query: 80  PPARQLPCA 54
             A  +PC+
Sbjct: 634 TSAAHMPCS 642

>P2RX2_HUMAN (Q9UBL9) P2X purinoceptor 2 (ATP receptor) (P2X2) (Purinergic|
           receptor)
          Length = 471

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = -1

Query: 179 LRHSSPSFGSRQACSNSNP--SQKIRVGQRCGP*GPPARQLPCASQVSKPVDSHACQ 15
           L  + P  G R    + +P   Q+ + G  CGP  PP R  P ++   + VD+ A +
Sbjct: 399 LGQAPPEPGHRSEDQHPSPPSGQEGQQGAECGPAFPPLRPCPISAPSEQMVDTPASE 455

>HMX3_MOUSE (P42581) Homeobox protein HMX3 (Homeobox protein Nkx-5.1)|
          Length = 458

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = -2

Query: 163 HLSGPDRRAPTRTLHRRSGSASGAAREGLPLVSFLAHPRFQNPSTR 26
           H  G  +RA  R      G+  GAA   L  V  LA PRF+ P+ R
Sbjct: 163 HTQGSGQRASPRP----QGALEGAAGFALSQVGDLAFPRFEIPAQR 204

>RF3_PHOLL (Q7MZN3) Peptide chain release factor 3 (RF-3)|
          Length = 529

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -3

Query: 309 GNFGGNQLLDGSISLSPL-YPSQTNDLHVSIASSLHQSFLW 190
           GNFG N +LDG +  +P   P QT+   VS        F++
Sbjct: 261 GNFGVNHMLDGLVKWAPAPMPRQTDVREVSAQEDKFTGFIF 301


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,698,069
Number of Sequences: 219361
Number of extensions: 1421250
Number of successful extensions: 3736
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3736
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)