Clone Name | bastl25h02 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | TEV3_BPR03 (Q38419) Intron-associated endonuclease 3 (EC 3.1.-.-... | 28 | 5.2 |
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>TEV3_BPR03 (Q38419) Intron-associated endonuclease 3 (EC 3.1.-.-) (I-TevIII)| Length = 269 Score = 28.5 bits (62), Expect = 5.2 Identities = 11/26 (42%), Positives = 18/26 (69%) Frame = +2 Query: 11 RRIWVERNSPIPSESGEGKGPIPHHQ 88 R+IW++ N PIP +S +G+ HH+ Sbjct: 4 RKIWIDANGPIPKDS-DGRTDEIHHK 28 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,856,416 Number of Sequences: 219361 Number of extensions: 242181 Number of successful extensions: 1553 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 1538 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1553 length of database: 80,573,946 effective HSP length: 33 effective length of database: 73,335,033 effective search space used: 1760040792 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)