ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl25h02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_119067.1| Arabidopsis thaliana ANAC075; transcription fac... 40 2.2
2gb|AC121498.12| Mus musculus chromosome 1, clone RP23-38P22, com... 40 2.2
3ref|NM_187520.1| Oryza sativa (japonica cultivar-group), predic... 40 2.2
4gb|AC164303.2| Mus musculus BAC clone RP24-530J21 from chromosom... 40 2.2
5gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 2.2
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 2.2
7gb|AC164880.3| Mus musculus BAC clone RP23-321G17 from chromosom... 40 2.2
8gb|AC113554.9| Homo sapiens chromosome 17, clone CTD-2501B8, com... 40 2.2
9gb|AC124690.4| Mus musculus BAC clone RP24-157B13 from chromosom... 40 2.2
10emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, ... 40 2.2
11gb|AC115870.18| Mus musculus chromosome 1, clone RP24-339L17, co... 40 2.2
12gb|AC026225.5| Homo sapiens chromosome 10 clone RP11-78C6, compl... 40 2.2
13gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome... 40 2.2
14dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.2
15dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.2
16dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.2
17dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.2
18gb|AC005036.1| Homo sapiens BAC clone RP11-364H22 from 2, comple... 40 2.2
19gb|AC007685.2|AC007685 Homo sapiens BAC clone RP11-558O12 from Y... 40 2.2
20dbj|AP005894.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.2
21dbj|AP004880.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.2
22dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 2.2
23dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.2
24dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic D... 40 2.2
25gb|AC008045.5|AC008045 Homo sapiens chromosome 14q31 clone CTD-2... 40 2.2
26dbj|AK099766.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.2
27dbj|AK104530.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.2
28dbj|AK099322.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.2
29dbj|AK099159.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.2
30dbj|AK072307.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.2
31dbj|AK067059.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.2
32gb|AC148972.4| Mus musculus BAC clone RP24-82J4 from chromosome ... 40 2.2
33dbj|AK061109.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.2
34gb|AC130532.3| Mus musculus BAC clone RP23-189G24 from 7, comple... 40 2.2
35gb|AC165285.2| Mus musculus BAC clone RP24-235I1 from chromosome... 40 2.2
36ref|XM_507921.1| PREDICTED: Pan troglodytes similar to ring fing... 38 8.5
37ref|NM_053429.1| Rattus norvegicus fibroblast growth factor rece... 38 8.5
38gb|AC154278.2| Mus musculus BAC clone RP24-269E24 from chromosom... 38 8.5
39gb|AC166357.3| Mus musculus BAC clone RP23-360N1 from chromosome... 38 8.5
40gb|AC123740.12| Mus musculus chromosome 17, clone RP24-94I20, co... 38 8.5
41gb|AC161289.2| Pan troglodytes BAC clone CH251-170B19 from chrom... 38 8.5
42gb|AC183672.2| Pan troglodytes BAC clone CH251-546K4 from chromo... 38 8.5
43gb|AC165142.3| Mus musculus BAC clone RP24-484I1 from chromosome... 38 8.5
44ref|XR_003832.1| PREDICTED: Mus musculus similar to Mitogen-acti... 38 8.5
45gb|AC144508.3| Mus musculus BAC clone RP24-152C23 from chromosom... 38 8.5
46gb|AC133091.3| Mus musculus BAC clone RP23-394D15 from chromosom... 38 8.5
47gb|AC000065.1| Homo sapiens BAC clone CTB-85C5 from 7, complete ... 38 8.5
48emb|AL929403.9| Human DNA sequence from clone RP13-438O9 on chro... 38 8.5
49ref|XM_499882.1| Yarrowia lipolytica CLIB122, YALI0A08646g predi... 38 8.5
50emb|AL158040.14| Human DNA sequence from clone RP11-360G10 on ch... 38 8.5
51gb|AF397423.1| Homo sapiens SOST gene, 3' UTR, MEOX1 gene, 5' UT... 38 8.5
52gb|AY128534.1| Homo sapiens cyclin-dependent kinase 6 (CDK6) gen... 38 8.5
53emb|CR622689.1| full-length cDNA clone CS0DJ002YN03 of T cells (... 38 8.5
54emb|CR618394.1| full-length cDNA clone CS0DA006YB07 of Neuroblas... 38 8.5
55gb|AC117464.4| Homo sapiens 3 BAC RP11-412N9 (Roswell Park Cance... 38 8.5
56gb|AC008914.7| Homo sapiens chromosome 5 clone CTD-2270I16, comp... 38 8.5
57ref|NM_017824.4| Homo sapiens membrane-associated ring finger (C... 38 8.5
58gb|AF277717.1|AF277717 Rattus norvegicus fibroblast growth facto... 38 8.5
59gb|AC008857.6| Homo sapiens chromosome 5 clone CTD-2180C22, comp... 38 8.5
60gb|AF347666.1|AF347666 Glycine max translation initiation factor... 38 8.5
61dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.5
62gb|AC093728.2| Homo sapiens BAC clone RP11-7F8 from 4, complete ... 38 8.5
63gb|AC007647.6|AC007647 Drosophila melanogaster, chromosome 3R, r... 38 8.5
64gb|AC011615.4|AC011615 Drosophila melanogaster, chromosome 3R, r... 38 8.5
65gb|AC119917.10| Mus musculus chromosome 8, clone RP24-247M18, co... 38 8.5
66gb|AC004149.1|AC004149 Homo sapiens chromosome 17, clone hCIT.50... 38 8.5
67dbj|AP003017.1| Mesorhizobium loti MAFF303099 plasmid pMLb DNA, ... 38 8.5
68dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.5
69dbj|AK122093.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.5
70dbj|AK000452.1| Homo sapiens cDNA FLJ20445 fis, clone KAT05170 38 8.5
71dbj|AK105386.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.5
72emb|CT025522.17| Mouse DNA sequence from clone RP23-332L23 on ch... 38 8.5
73gb|AC167563.3| Mus musculus BAC clone RP24-392I11 from chromosom... 38 8.5
74gb|AE003713.3| Drosophila melanogaster chromosome 3R, section 51... 38 8.5
75gb|BC015480.1| Homo sapiens membrane-associated ring finger (C3H... 38 8.5
76gb|AC115820.11| Mus musculus chromosome 8, clone RP23-479K9, com... 38 8.5
77gb|AC134895.5| Mus musculus BAC clone RP24-288D5 from 8, complet... 38 8.5
78gb|AC127247.3| Mus musculus BAC clone RP24-435G16 from 3, comple... 38 8.5
79gb|AC132234.5| Mus musculus BAC clone RP24-496A9 from 3, complet... 38 8.5
80emb|CT010467.6| Mouse DNA sequence from clone RP23-81C12 on chro... 38 8.5
81emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1... 38 8.5
82dbj|AP006133.1| Lotus japonicus genomic DNA, chromosome 1, clone... 38 8.5
83emb|AL807251.2| Human DNA sequence from clone RP11-425M20 on chr... 38 8.5 
>ref|NM_119067.1| Arabidopsis thaliana ANAC075; transcription factor AT4G29230
           (ANAC075) mRNA, complete cds
          Length = 1497

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 95  cggcggaggcggcggagagt 114
           ||||||||||||||||||||
Sbjct: 726 cggcggaggcggcggagagt 745
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>gb|AC121498.12| Mus musculus chromosome 1, clone RP23-38P22, complete sequence
          Length = 152264

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    gagagtggggaggggaaagg 69
             ||||||||||||||||||||
Sbjct: 15032 gagagtggggaggggaaagg 15051
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>ref|NM_187520.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 900

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 92  ccacggcggaggcggcggag 111
           ||||||||||||||||||||
Sbjct: 277 ccacggcggaggcggcggag 258
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>gb|AC164303.2| Mus musculus BAC clone RP24-530J21 from chromosome 14, complete
             sequence
          Length = 164905

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    gagagtggggaggggaaagg 69
             ||||||||||||||||||||
Sbjct: 33437 gagagtggggaggggaaagg 33456
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 97     gcggaggcggcggagagtgt 116
              ||||||||||||||||||||
Sbjct: 966923 gcggaggcggcggagagtgt 966904
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 92      ccacggcggaggcggcggag 111
               ||||||||||||||||||||
Sbjct: 8596015 ccacggcggaggcggcggag 8595996
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>gb|AC164880.3| Mus musculus BAC clone RP23-321G17 from chromosome 7, complete sequence
          Length = 210387

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    gagagtggggaggggaaagg 69
             ||||||||||||||||||||
Sbjct: 63627 gagagtggggaggggaaagg 63646
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>gb|AC113554.9| Homo sapiens chromosome 17, clone CTD-2501B8, complete sequence
          Length = 179509

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   gctgaagcacgtggaggtgg 169
             ||||||||||||||||||||
Sbjct: 71321 gctgaagcacgtggaggtgg 71302
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>gb|AC124690.4| Mus musculus BAC clone RP24-157B13 from chromosome 1, complete sequence
          Length = 178992

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 50     gagagtggggaggggaaagg 69
              ||||||||||||||||||||
Sbjct: 106540 gagagtggggaggggaaagg 106559
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>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70
          Length = 198429

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 95     cggcggaggcggcggagagt 114
              ||||||||||||||||||||
Sbjct: 139889 cggcggaggcggcggagagt 139908
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>gb|AC115870.18| Mus musculus chromosome 1, clone RP24-339L17, complete sequence
          Length = 186963

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 50   gagagtggggaggggaaagg 69
            ||||||||||||||||||||
Sbjct: 9795 gagagtggggaggggaaagg 9776
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>gb|AC026225.5| Homo sapiens chromosome 10 clone RP11-78C6, complete sequence
          Length = 201173

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    gtaggatttgggtagagaga 31
             ||||||||||||||||||||
Sbjct: 15611 gtaggatttgggtagagaga 15592
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>gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1041F02,
             complete sequence
          Length = 137327

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    ccacggcggaggcggcggag 111
             ||||||||||||||||||||
Sbjct: 76987 ccacggcggaggcggcggag 76968
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 94      acggcggaggcggcggagag 113
               ||||||||||||||||||||
Sbjct: 2398961 acggcggaggcggcggagag 2398942
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 90       gtccacggcggaggcggcgg 109
                ||||||||||||||||||||
Sbjct: 25773068 gtccacggcggaggcggcgg 25773087
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 92      ccacggcggaggcggcggag 111
               ||||||||||||||||||||
Sbjct: 8593850 ccacggcggaggcggcggag 8593831
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 94       acggcggaggcggcggagag 113
                ||||||||||||||||||||
Sbjct: 30787802 acggcggaggcggcggagag 30787783



 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 94       acggcggaggcggcggagag 113
                ||||||||||||||||||||
Sbjct: 18134919 acggcggaggcggcggagag 18134900
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>gb|AC005036.1| Homo sapiens BAC clone RP11-364H22 from 2, complete sequence
          Length = 199684

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 17     atttgggtagagagaaattc 36
              ||||||||||||||||||||
Sbjct: 181675 atttgggtagagagaaattc 181656
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>gb|AC007685.2|AC007685 Homo sapiens BAC clone RP11-558O12 from Y, complete sequence
          Length = 178377

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    gagcgagagtggggagggga 65
             ||||||||||||||||||||
Sbjct: 28354 gagcgagagtggggagggga 28335
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>dbj|AP005894.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0095O23
          Length = 159792

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    acggcggaggcggcggagag 113
             ||||||||||||||||||||
Sbjct: 77371 acggcggaggcggcggagag 77352
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>dbj|AP004880.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0487D09
          Length = 161531

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 94     acggcggaggcggcggagag 113
              ||||||||||||||||||||
Sbjct: 127949 acggcggaggcggcggagag 127930
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 94      acggcggaggcggcggagag 113
               ||||||||||||||||||||
Sbjct: 3865809 acggcggaggcggcggagag 3865790
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>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0416A11
          Length = 171519

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    gtccacggcggaggcggcgg 109
             ||||||||||||||||||||
Sbjct: 55272 gtccacggcggaggcggcgg 55291
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>dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0047E05
          Length = 184323

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    acggcggaggcggcggagag 113
             ||||||||||||||||||||
Sbjct: 58320 acggcggaggcggcggagag 58301
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>gb|AC008045.5|AC008045 Homo sapiens chromosome 14q31 clone CTD-2552H2 containing neurexin III
             gene, partial cds, complete sequence
          Length = 188078

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    gagagtggggaggggaaagg 69
             ||||||||||||||||||||
Sbjct: 35115 gagagtggggaggggaaagg 35134
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>dbj|AK099766.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095A12, full
           insert sequence
          Length = 4054

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 92  ccacggcggaggcggcggag 111
           ||||||||||||||||||||
Sbjct: 330 ccacggcggaggcggcggag 311
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>dbj|AK104530.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A05, full
           insert sequence
          Length = 1071

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 92  ccacggcggaggcggcggag 111
           ||||||||||||||||||||
Sbjct: 377 ccacggcggaggcggcggag 358
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>dbj|AK099322.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033014L15, full
           insert sequence
          Length = 1096

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 92  ccacggcggaggcggcggag 111
           ||||||||||||||||||||
Sbjct: 390 ccacggcggaggcggcggag 371
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>dbj|AK099159.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074F15, full
           insert sequence
          Length = 1126

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 92  ccacggcggaggcggcggag 111
           ||||||||||||||||||||
Sbjct: 420 ccacggcggaggcggcggag 401
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>dbj|AK072307.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020N11, full
           insert sequence
          Length = 2010

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  gtccacggcggaggcggcgg 109
           ||||||||||||||||||||
Sbjct: 821 gtccacggcggaggcggcgg 840
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>dbj|AK067059.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090O06, full
           insert sequence
          Length = 2127

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  gtccacggcggaggcggcgg 109
           ||||||||||||||||||||
Sbjct: 800 gtccacggcggaggcggcgg 819
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>gb|AC148972.4| Mus musculus BAC clone RP24-82J4 from chromosome 7, complete sequence
          Length = 221912

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 50     gagagtggggaggggaaagg 69
              ||||||||||||||||||||
Sbjct: 120903 gagagtggggaggggaaagg 120922
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>dbj|AK061109.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-C07, full
           insert sequence
          Length = 1134

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 92  ccacggcggaggcggcggag 111
           ||||||||||||||||||||
Sbjct: 422 ccacggcggaggcggcggag 403
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>gb|AC130532.3| Mus musculus BAC clone RP23-189G24 from 7, complete sequence
          Length = 207333

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 50     gagagtggggaggggaaagg 69
              ||||||||||||||||||||
Sbjct: 155734 gagagtggggaggggaaagg 155753
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>gb|AC165285.2| Mus musculus BAC clone RP24-235I1 from chromosome 14, complete sequence
          Length = 171474

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    gagagtggggaggggaaagg 69
             ||||||||||||||||||||
Sbjct: 23040 gagagtggggaggggaaagg 23021
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>ref|XM_507921.1| PREDICTED: Pan troglodytes similar to ring finger protein 153;
           membrane-associated RING-CH protein V (LOC450607), mRNA
          Length = 1053

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 95  cggcggaggcggcggagag 113
           |||||||||||||||||||
Sbjct: 137 cggcggaggcggcggagag 119
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>ref|NM_053429.1| Rattus norvegicus fibroblast growth factor receptor 3 (Fgfr3), mRNA
          Length = 3187

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 150 gctgaagcacgtggaggtg 168
           |||||||||||||||||||
Sbjct: 843 gctgaagcacgtggaggtg 861
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>gb|AC154278.2| Mus musculus BAC clone RP24-269E24 from chromosome 16, complete
             sequence
          Length = 153579

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 52    gagtggggaggggaaaggt 70
             |||||||||||||||||||
Sbjct: 33330 gagtggggaggggaaaggt 33312
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>gb|AC166357.3| Mus musculus BAC clone RP23-360N1 from chromosome 7, complete
            sequence
          Length = 220916

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 47   agcgagagtggggaggggaaagg 69
            |||||||||||||||||| ||||
Sbjct: 1301 agcgagagtggggagggggaagg 1279
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>gb|AC123740.12| Mus musculus chromosome 17, clone RP24-94I20, complete sequence
          Length = 167513

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 50   gagagtggggaggggaaag 68
            |||||||||||||||||||
Sbjct: 1401 gagagtggggaggggaaag 1383
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>gb|AC161289.2| Pan troglodytes BAC clone CH251-170B19 from chromosome 7, complete
             sequence
          Length = 151213

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 50    gagagtggggaggggaaag 68
             |||||||||||||||||||
Sbjct: 15704 gagagtggggaggggaaag 15722
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>gb|AC183672.2| Pan troglodytes BAC clone CH251-546K4 from chromosome 7, complete
              sequence
          Length = 231124

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 50     gagagtggggaggggaaag 68
              |||||||||||||||||||
Sbjct: 124225 gagagtggggaggggaaag 124207
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>gb|AC165142.3| Mus musculus BAC clone RP24-484I1 from chromosome 7, complete sequence
          Length = 165049

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 47    agcgagagtggggaggggaaagg 69
             |||||||||||||||||| ||||
Sbjct: 91460 agcgagagtggggagggggaagg 91438
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>ref|XR_003832.1| PREDICTED: Mus musculus similar to Mitogen-activated protein kinase
           kinase kinase kinase 1 (MAPK/ERK kinase kinase kinase 1)
           (MEK kinase kinase 1) (MEKKK 1) (Hematopoietic
           progenitor kinase) (HPK) (LOC672367), mRNA
          Length = 2744

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 47  agcgagagtggggaggggaaagg 69
           |||||||||||||||||| ||||
Sbjct: 80  agcgagagtggggagggggaagg 102
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>gb|AC144508.3| Mus musculus BAC clone RP24-152C23 from chromosome 15, complete
             sequence
          Length = 155524

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 51    agagtggggaggggaaagg 69
             |||||||||||||||||||
Sbjct: 17148 agagtggggaggggaaagg 17166
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>gb|AC133091.3| Mus musculus BAC clone RP23-394D15 from chromosome 8, complete sequence
          Length = 221035

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 50    gagagtggggaggggaaag 68
             |||||||||||||||||||
Sbjct: 33520 gagagtggggaggggaaag 33502
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>gb|AC000065.1| Homo sapiens BAC clone CTB-85C5 from 7, complete sequence
          Length = 82261

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 50    gagagtggggaggggaaag 68
             |||||||||||||||||||
Sbjct: 22052 gagagtggggaggggaaag 22070
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>emb|AL929403.9| Human DNA sequence from clone RP13-438O9 on chromosome 6, complete
             sequence
          Length = 86576

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 15    ggatttgggtagagagaaa 33
             |||||||||||||||||||
Sbjct: 58098 ggatttgggtagagagaaa 58080
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>ref|XM_499882.1| Yarrowia lipolytica CLIB122, YALI0A08646g predicted mRNA
          Length = 1089

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 95  cggcggaggcggcggagag 113
           |||||||||||||||||||
Sbjct: 75  cggcggaggcggcggagag 93
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>emb|AL158040.14| Human DNA sequence from clone RP11-360G10 on chromosome 10 Contains the
              5' end of the gene for KIAA0940 protein, a succinate
              dehydrogenase complex pseudogene, the 5' end of a novel
              gene (FLJ20445), a nucleolar protein family A member 2
              pseudogene 1 (NOLA2P1) and a CpG island, complete sequence
          Length = 213648

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 95     cggcggaggcggcggagag 113
              |||||||||||||||||||
Sbjct: 209225 cggcggaggcggcggagag 209207
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>gb|AF397423.1| Homo sapiens SOST gene, 3' UTR, MEOX1 gene, 5' UTR, and SOST/MEOX1
             intergenic region
          Length = 93790

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 50    gagagtggggaggggaaag 68
             |||||||||||||||||||
Sbjct: 75653 gagagtggggaggggaaag 75635
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>gb|AY128534.1| Homo sapiens cyclin-dependent kinase 6 (CDK6) gene, complete cds
          Length = 220803

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 50     gagagtggggaggggaaag 68
              |||||||||||||||||||
Sbjct: 205810 gagagtggggaggggaaag 205792
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>emb|CR622689.1| full-length cDNA clone CS0DJ002YN03 of T cells (Jurkat cell line)
           Cot 10-normalized of Homo sapiens (human)
          Length = 1650

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 95  cggcggaggcggcggagag 113
           |||||||||||||||||||
Sbjct: 128 cggcggaggcggcggagag 110
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>emb|CR618394.1| full-length cDNA clone CS0DA006YB07 of Neuroblastoma of Homo
           sapiens (human)
          Length = 1502

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 95  cggcggaggcggcggagag 113
           |||||||||||||||||||
Sbjct: 97  cggcggaggcggcggagag 79
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>gb|AC117464.4| Homo sapiens 3 BAC RP11-412N9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 154728

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 50     gagagtggggaggggaaag 68
              |||||||||||||||||||
Sbjct: 100514 gagagtggggaggggaaag 100496
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>gb|AC008914.7| Homo sapiens chromosome 5 clone CTD-2270I16, complete sequence
          Length = 139677

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 52    gagtggggaggggaaaggt 70
             |||||||||||||||||||
Sbjct: 95533 gagtggggaggggaaaggt 95515
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>ref|NM_017824.4| Homo sapiens membrane-associated ring finger (C3HC4) 5 (MARCH5),
           mRNA
          Length = 3941

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 95  cggcggaggcggcggagag 113
           |||||||||||||||||||
Sbjct: 151 cggcggaggcggcggagag 133
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>gb|AF277717.1|AF277717 Rattus norvegicus fibroblast growth factor receptor 3 (Fgfr3) mRNA,
           complete cds
          Length = 3187

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 150 gctgaagcacgtggaggtg 168
           |||||||||||||||||||
Sbjct: 843 gctgaagcacgtggaggtg 861
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>gb|AC008857.6| Homo sapiens chromosome 5 clone CTD-2180C22, complete sequence
          Length = 108022

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 52     gagtggggaggggaaaggt 70
              |||||||||||||||||||
Sbjct: 101083 gagtggggaggggaaaggt 101101
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>gb|AF347666.1|AF347666 Glycine max translation initiation factor IF1 (infA) mRNA, complete
           cds; nuclear gene for chloroplast product
          Length = 776

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 95  cggcggaggcggcggagag 113
           |||||||||||||||||||
Sbjct: 188 cggcggaggcggcggagag 170
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 95      cggcggaggcggcggagag 113
               |||||||||||||||||||
Sbjct: 2914731 cggcggaggcggcggagag 2914713
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>gb|AC093728.2| Homo sapiens BAC clone RP11-7F8 from 4, complete sequence
          Length = 114434

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 52    gagtggggaggggaaaggtccaa 74
             |||||||||||||||| ||||||
Sbjct: 85127 gagtggggaggggaaatgtccaa 85105
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>gb|AC007647.6|AC007647 Drosophila melanogaster, chromosome 3R, region 89B-89C, BAC clone
              BACR05P04, complete sequence
          Length = 194335

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 47     agcgagagtggggagggga 65
              |||||||||||||||||||
Sbjct: 175048 agcgagagtggggagggga 175066
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>gb|AC011615.4|AC011615 Drosophila melanogaster, chromosome 3R, region 89D-89D, BAC clone
             BACR01H23, complete sequence
          Length = 199653

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 47    agcgagagtggggagggga 65
             |||||||||||||||||||
Sbjct: 40189 agcgagagtggggagggga 40207
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>gb|AC119917.10| Mus musculus chromosome 8, clone RP24-247M18, complete sequence
          Length = 174845

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 46     gagcgagagtggggaggggaaag 68
              ||||||||| |||||||||||||
Sbjct: 160431 gagcgagagaggggaggggaaag 160409
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>gb|AC004149.1|AC004149 Homo sapiens chromosome 17, clone hCIT.501_O_10, complete sequence
          Length = 84767

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 50    gagagtggggaggggaaag 68
             |||||||||||||||||||
Sbjct: 69396 gagagtggggaggggaaag 69414
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>dbj|AP003017.1| Mesorhizobium loti MAFF303099 plasmid pMLb DNA, complete genome
          Length = 208315

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 91     tccacggcggaggcggcgg 109
              |||||||||||||||||||
Sbjct: 111614 tccacggcggaggcggcgg 111632
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>dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0050B07
          Length = 142134

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 95    cggcggaggcggcggagag 113
             |||||||||||||||||||
Sbjct: 85018 cggcggaggcggcggagag 85000
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>dbj|AK122093.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124K14, full
           insert sequence
          Length = 504

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 95  cggcggaggcggcggagag 113
           |||||||||||||||||||
Sbjct: 309 cggcggaggcggcggagag 291
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>dbj|AK000452.1| Homo sapiens cDNA FLJ20445 fis, clone KAT05170
          Length = 1522

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 95  cggcggaggcggcggagag 113
           |||||||||||||||||||
Sbjct: 153 cggcggaggcggcggagag 135
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>dbj|AK105386.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-H02, full
           insert sequence
          Length = 583

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 95  cggcggaggcggcggagag 113
           |||||||||||||||||||
Sbjct: 313 cggcggaggcggcggagag 295
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>emb|CT025522.17| Mouse DNA sequence from clone RP23-332L23 on chromosome 16, complete
              sequence
          Length = 199628

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 52     gagtggggaggggaaaggt 70
              |||||||||||||||||||
Sbjct: 144781 gagtggggaggggaaaggt 144799
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>gb|AC167563.3| Mus musculus BAC clone RP24-392I11 from chromosome 16, complete sequence
          Length = 201682

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 52     gagtggggaggggaaaggt 70
              |||||||||||||||||||
Sbjct: 183050 gagtggggaggggaaaggt 183032
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>gb|AE003713.3| Drosophila melanogaster chromosome 3R, section 51 of 118 of the
             complete sequence
          Length = 226561

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 47    agcgagagtggggagggga 65
             |||||||||||||||||||
Sbjct: 38357 agcgagagtggggagggga 38375
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>gb|BC015480.1| Homo sapiens membrane-associated ring finger (C3HC4) 5, mRNA (cDNA
           clone MGC:8860 IMAGE:3905766), complete cds
          Length = 3896

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 95  cggcggaggcggcggagag 113
           |||||||||||||||||||
Sbjct: 111 cggcggaggcggcggagag 93
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>gb|AC115820.11| Mus musculus chromosome 8, clone RP23-479K9, complete sequence
          Length = 185977

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 46    gagcgagagtggggaggggaaag 68
             ||||||||| |||||||||||||
Sbjct: 44793 gagcgagagaggggaggggaaag 44771
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>gb|AC134895.5| Mus musculus BAC clone RP24-288D5 from 8, complete sequence
          Length = 156306

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 50     gagagtggggaggggaaag 68
              |||||||||||||||||||
Sbjct: 135290 gagagtggggaggggaaag 135272
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>gb|AC127247.3| Mus musculus BAC clone RP24-435G16 from 3, complete sequence
          Length = 181566

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 79     gcatcaccaatgtccacgg 97
              |||||||||||||||||||
Sbjct: 154233 gcatcaccaatgtccacgg 154251
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>gb|AC132234.5| Mus musculus BAC clone RP24-496A9 from 3, complete sequence
          Length = 127400

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 79     gcatcaccaatgtccacgg 97
              |||||||||||||||||||
Sbjct: 110430 gcatcaccaatgtccacgg 110412
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>emb|CT010467.6| Mouse DNA sequence from clone RP23-81C12 on chromosome 17, complete
             sequence
          Length = 216559

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 50    gagagtggggaggggaaag 68
             |||||||||||||||||||
Sbjct: 92961 gagagtggggaggggaaag 92943
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>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 95     cggcggaggcggcggagag 113
              |||||||||||||||||||
Sbjct: 854904 cggcggaggcggcggagag 854886
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>dbj|AP006133.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09O08, TM0231a,
            complete sequence
          Length = 64124

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 93   cacggcggaggcggcggag 111
            |||||||||||||||||||
Sbjct: 3506 cacggcggaggcggcggag 3488
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>emb|AL807251.2| Human DNA sequence from clone RP11-425M20 on chromosome 6, complete
             sequence
          Length = 40767

 Score = 38.2 bits (19), Expect = 8.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 15    ggatttgggtagagagaaa 33
             |||||||||||||||||||
Sbjct: 12305 ggatttgggtagagagaaa 12287


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,139,543
Number of Sequences: 3902068
Number of extensions: 1139543
Number of successful extensions: 103637
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102777
Number of HSP's gapped (non-prelim): 860
length of query: 174
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 152
effective length of database: 17,147,199,772
effective search space: 2606374365344
effective search space used: 2606374365344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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