ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl25g09 |
|---|---|
| Clone Library Name | barley_pub |
>UBP5_ARATH (O22207) Ubiquitin carboxyl-terminal hydrolase 5 (EC 3.1.2.15)| (Ubiquitin thioesterase 5) (Ubiquitin-specific-processing protease 5) (Deubiquitinating enzyme 5) (AtUBP5) Length = 924 Score = 48.1 bits (113), Expect = 9e-06 Identities = 22/49 (44%), Positives = 29/49 (59%) Frame = +3 Query: 204 SSASCLPCTAEEERAAVDALTRQADANVKDGDLRYLISQSWWTNWQSYV 350 SS+S + EEER + + A+AN K+GD YLI+Q WW W YV Sbjct: 8 SSSSSTDLSPEEERVFIRDIAIAAEANSKEGDTFYLITQRWWQEWIEYV 56
>UBP15_MOUSE (Q8R5H1) Ubiquitin carboxyl-terminal hydrolase 15 (EC 3.1.2.15)| (Ubiquitin thioesterase 15) (Ubiquitin-specific-processing protease 15) (Deubiquitinating enzyme 15) Length = 981 Score = 33.9 bits (76), Expect = 0.17 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 9/71 (12%) Frame = +3 Query: 240 ERAAVDALTRQAD------ANVKDGDLRYLISQSWWTNWQSYVGLLS---YGENDTDIPL 392 E A D T+++D +++ GD YL+ W+ W+ YVG S Y D ++ Sbjct: 3 EGGAADLDTQRSDIATLLKTSLRKGDTWYLVDSRWFKQWKKYVGFDSWDKYQMGDQNV-- 60 Query: 393 QPASRPGEIDN 425 PG IDN Sbjct: 61 ----YPGPIDN 67
>UBP15_HUMAN (Q9Y4E8) Ubiquitin carboxyl-terminal hydrolase 15 (EC 3.1.2.15)| (Ubiquitin thioesterase 15) (Ubiquitin-specific-processing protease 15) (Deubiquitinating enzyme 15) (Unph-2) (Unph4) Length = 981 Score = 33.9 bits (76), Expect = 0.17 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 9/71 (12%) Frame = +3 Query: 240 ERAAVDALTRQAD------ANVKDGDLRYLISQSWWTNWQSYVGLLS---YGENDTDIPL 392 E A D T+++D +++ GD YL+ W+ W+ YVG S Y D ++ Sbjct: 3 EGGAADLDTQRSDIATLLKTSLRKGDTWYLVDSRWFKQWKKYVGFDSWDKYQMGDQNV-- 60 Query: 393 QPASRPGEIDN 425 PG IDN Sbjct: 61 ----YPGPIDN 67
>UBP32_HUMAN (Q8NFA0) Ubiquitin carboxyl-terminal hydrolase 32 (EC 3.1.2.15)| (Ubiquitin thioesterase 32) (Ubiquitin-specific-processing protease 32) (Deubiquitinating enzyme 32) (NY-REN-60 antigen) Length = 1604 Score = 33.1 bits (74), Expect = 0.29 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = +3 Query: 222 PCTAEEERAAVDA-LTRQADANVKDGDLRYLISQSWWTNWQSYV 350 P T EEE + L R++ ++ G ++IS WW W+ YV Sbjct: 368 PATPEEEGQIIRGWLERESRYGLQAGHNWFIISMQWWQQWKEYV 411
>SUM1_YEAST (P46676) Suppressor of mar1-1 protein (SUM1-1 protein)| Length = 1062 Score = 29.3 bits (64), Expect = 4.2 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = -3 Query: 189 H*VSSSPSNPISRPTEIESNRIET 118 H + SSPSNP+S+P + ++R T Sbjct: 374 HQIPSSPSNPVSQPAPVRTSRSAT 397
>IRA2_YEAST (P19158) Inhibitory regulator protein IRA2| Length = 3079 Score = 29.3 bits (64), Expect = 4.2 Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 3/88 (3%) Frame = +3 Query: 168 RGMTIPSAEGLLSSASCLPCTAEEERAAVDALTRQADAN---VKDGDLRYLISQSWWTNW 338 +G + PS+ S S + +L+RQ + ++ R L S SW TN Sbjct: 397 QGSSSPSSSSPSSPPSSSSSDNNNQNIIAKSLSRQLSHHQSYIQQQSERKLHS-SWTTNS 455 Query: 339 QSYVGLLSYGENDTDIPLQPASRPGEID 422 QS L S N T ++PGE D Sbjct: 456 QSSTSLSSSTSNSTTTDFSTHTQPGEYD 483
>CATA_SALTY (P17750) Peroxidase/catalase HPI (EC 1.11.1.6)| (Catalase-peroxidase) (Hydroperoxidase I) Length = 726 Score = 29.3 bits (64), Expect = 4.2 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 3/30 (10%) Frame = +3 Query: 276 DANVKDGDLRYLI--SQSWW-TNWQSYVGL 356 D + GDL+ L+ SQ WW +W SYVGL Sbjct: 70 DYSALKGDLKALLTDSQPWWPADWGSYVGL 99
>CATA_SALTI (Q8Z303) Peroxidase/catalase HPI (EC 1.11.1.6)| (Catalase-peroxidase) (Hydroperoxidase I) Length = 726 Score = 29.3 bits (64), Expect = 4.2 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 3/30 (10%) Frame = +3 Query: 276 DANVKDGDLRYLI--SQSWW-TNWQSYVGL 356 D + GDL+ L+ SQ WW +W SYVGL Sbjct: 70 DYSALKGDLKALLTDSQPWWPADWGSYVGL 99
>DNAK1_PROMA (Q7VC04) Chaperone protein dnaK1 (Heat shock protein 70-1) (Heat| shock 70 kDa protein 1) (HSP70-1) Length = 666 Score = 28.5 bits (62), Expect = 7.2 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 2/67 (2%) Frame = +3 Query: 132 STRSQLGVRLDWRGMTIPSAEGLLSSASCLPCTAEEERAAVDALTRQADANVKD--GDLR 305 +T S +GV R I +AEG ++ S + T E E RQ N K+ +L+ Sbjct: 11 TTNSVIGVLEAGRPFVIANAEGSRTTPSVIGYTKESELVVGQQARRQLVLNPKNTFSNLK 70 Query: 306 YLISQSW 326 + +SW Sbjct: 71 RYVGRSW 77
>UBP4_HUMAN (Q13107) Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.1.2.15)| (Ubiquitin thioesterase 4) (Ubiquitin-specific-processing protease 4) (Deubiquitinating enzyme 4) (Ubiquitous nuclear protein homolog) Length = 963 Score = 28.5 bits (62), Expect = 7.2 Identities = 19/65 (29%), Positives = 30/65 (46%) Frame = +3 Query: 231 AEEERAAVDALTRQADANVKDGDLRYLISQSWWTNWQSYVGLLSYGENDTDIPLQPASRP 410 AE +++ + L R ++ G YLI W+ W+ YVG S+ + + P Sbjct: 13 AETQKSELGPLMR---TTLQRGAQWYLIDSRWFKQWKKYVGFDSWDMYNVG---EHNLFP 66 Query: 411 GEIDN 425 G IDN Sbjct: 67 GPIDN 71
>GLI3_MOUSE (Q61602) Zinc finger protein GLI3| Length = 1596 Score = 28.5 bits (62), Expect = 7.2 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 7/41 (17%) Frame = +3 Query: 222 PCTAE-EERAAVDALTRQADANVKDGDL------RYLISQS 323 PC E A++ALT ADAN+ D DL +YL SQ+ Sbjct: 1064 PCPPSITENVALEALTMDADANLNDEDLLPDDVVQYLNSQN 1104
>LIFO_BURGL (Q05490) Lipase chaperone (Lipase foldase) (Lipase helper protein)| (Lipase activator protein) (Lipase modulator) Length = 353 Score = 28.1 bits (61), Expect = 9.4 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 3/74 (4%) Frame = +3 Query: 216 CLPCTAEEERAAVDALTRQADANVKDGDLRYLISQSWWTNWQSYVGLLSYGENDTDI--- 386 CL E AA+DAL R+ A DG + W +++Y L+ D + Sbjct: 112 CLTAQGELTPAALDALVRREIAAQLDGSPAQAEALGVWRRYRAYFDALAQLPGDGAVLGD 171 Query: 387 PLQPASRPGEIDNR 428 L PA+ +D R Sbjct: 172 KLDPAAMQLALDQR 185 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,023,156 Number of Sequences: 219361 Number of extensions: 1066470 Number of successful extensions: 2840 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2785 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2840 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
