ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl25g04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK121570.1| Oryza sativa (japonica cultivar-group) cDNA clon... 238 1e-59
2ref|XM_471832.1| Oryza sativa (japonica cultivar-group), predic... 230 3e-57
3emb|AL663005.3|OSJN00208 Oryza sativa genomic DNA, chromosome 4,... 230 3e-57
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 230 3e-57
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
6dbj|AP004636.3| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
7dbj|AP003872.3| Oryza sativa (japonica cultivar-group) genomic D... 159 1e-35
8gb|AF545812.1| Zea mays global transcription factor group C 102 ... 145 1e-31
9emb|AL663021.4|OSJN00218 Oryza sativa genomic DNA, chromosome 4,... 135 1e-28
10gb|AF040651.2| Caenorhabditis elegans cosmid W04H10, complete se... 44 0.39
11gb|DQ103595.1| Arabidopsis arenosa clone BAC 28N14, complete seq... 42 1.5
12gb|DP000022.1| Microcebus murinus target 1 genomic scaffold 42 1.5
13gb|AC145439.4| Microcebus murinus clone CH257-441K3, complete se... 42 1.5
14ref|XM_508303.1| PREDICTED: Pan troglodytes similar to RIKEN cDN... 40 6.1
15gb|AC169994.1| Rhesus Macaque BAC CH250-169F18 (Children's Hosp... 40 6.1
16gb|AC008348.5| Drosophila melanogaster clone BACR02I11, complete... 40 6.1
17gb|AC008203.8| Drosophila melanogaster clone BACR29F06, complete... 40 6.1
18gb|AC005714.11| Drosophila melanogaster clone BACR48M13, complet... 40 6.1
19ref|XM_544498.2| PREDICTED: Canis familiaris similar to myomesin... 40 6.1
20gb|AF466596.1| Aedes aegypti isolate AEA_CLU25 putative secreted... 40 6.1
21emb|BX908755.10| Zebrafish DNA sequence from clone DKEY-67F11 in... 40 6.1
22gb|AC104361.3| Homo sapiens chromosome 11, clone RP11-950A3, com... 40 6.1
23gb|AC099340.3| Homo sapiens BAC clone RP11-214O14 from 4, comple... 40 6.1
24ref|NM_142974.2| Drosophila melanogaster CG17786-RA (CG17786), mRNA 40 6.1
25gb|AC104825.4| Homo sapiens BAC clone RP11-774O3 from 4, complet... 40 6.1
26gb|AY070899.1| Drosophila melanogaster RE01338 full length cDNA 40 6.1
27emb|BX931837.2| Gallus gallus finished cDNA, clone ChEST553g9 40 6.1
28gb|AF003529.2| Homo sapiens glypican 3 (GPC3) gene, partial cds ... 40 6.1
29gb|AE003746.3| Drosophila melanogaster chromosome 3R, section 84... 40 6.1
30gb|AE003457.4| Drosophila melanogaster chromosome 2R, section 65... 40 6.1
31dbj|AP001107.5| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 6.1
32emb|BX908786.9| Zebrafish DNA sequence from clone CH211-13O8 in ... 40 6.1
33gb|AC148321.7| Mus musculus BAC clone RP24-512H17 from 19, compl... 40 6.1
34gb|U44469.1|HIVU44469 Human immunodeficiency virus type 1 nef mR... 40 6.1
35emb|AL833800.6| Mouse DNA sequence from clone RP23-147P20 on chr... 40 6.1

>dbj|AK121570.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035J21, full
           insert sequence
          Length = 3743

 Score =  238 bits (120), Expect = 1e-59
 Identities = 363/444 (81%)
 Strand = Plus / Plus

                                                                       
Query: 3   aagaaagcaaatctcattggaaccctcaaggatgctgcaagtgaggctgttggttctgat 62
           |||||||||||||||||||| ||||||||| | ||||||| ||| ||||||||| |||||
Sbjct: 516 aagaaagcaaatctcattggcaccctcaagaaggctgcaaatgatgctgttggtgctgat 575

                                                                       
Query: 63  attgtcttgcatgtcaaaagcaagaatggggatggcattgacctgacggatgaaatactg 122
           |||||||||||||| |||   |||||||    |||  ||| | | | ||| || ||| ||
Sbjct: 576 attgtcttgcatgtgaaagctaagaatgacagtggtgttggcttaatggaggacatagtg 635

                                                                       
Query: 123 cgtgctgtttctgctcagtcgaaatctggcactccagttgttggtcacattgcaaaagag 182
           |||||||| | ||||||||| ||||| |     ||| ||||||||||||| |||||||||
Sbjct: 636 cgtgctgtctgtgctcagtcaaaatcagatgacccaattgttggtcacatcgcaaaagag 695

                                                                       
Query: 183 gcacctgagggtaagctccttgaaacatgggcagaaaagttatctggtggatctgtacaa 242
           |||||||||||||||||||||||| | |||||||| || || ||| |   |||||| |||
Sbjct: 696 gcacctgagggtaagctccttgaagcttgggcagacaaattgtctagctcatctgtgcaa 755

                                                                       
Query: 243 cttgcagacgtaacacaagggttttctgagctttttgctgtgaaagacgccccagagatc 302
           ||| ||||  ||||  | || |||||||||||||||||| |||| ||  || ||||||||
Sbjct: 756 cttacagatataacgaatggcttttctgagctttttgctatgaaggatacctcagagatc 815

                                                                       
Query: 303 atatgtgtgaagaaggctgcttacctaacttcatccgtgatgaaaaactttgtggtacca 362
           | |||||||||||||||  | |||||||| ||||| || |||||||| |||||||| || 
Sbjct: 816 acatgtgtgaagaaggcctcctacctaacctcatctgtaatgaaaaattttgtggttccg 875

                                                                       
Query: 363 accatggagaagattattgatgaggagagaaaagtctcacactcctcattgatggatgac 422
           |   | |||||| | |||||||| ||||| |||||  ||||||| |||||||||||||| 
Sbjct: 876 aagctagagaaggtgattgatgaagagaggaaagtgacacactcttcattgatggatgag 935

                                   
Query: 423 acggagaaggttattcttgatcct 446
           || || |||| |||||||||||||
Sbjct: 936 acagaaaaggctattcttgatcct 959



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>ref|XM_471832.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3171

 Score =  230 bits (116), Expect = 3e-57
 Identities = 362/444 (81%)
 Strand = Plus / Plus

                                                                       
Query: 3   aagaaagcaaatctcattggaaccctcaaggatgctgcaagtgaggctgttggttctgat 62
           |||||||||||||||||||| ||||||||| | ||||||| ||| ||||||||| |||||
Sbjct: 286 aagaaagcaaatctcattggcaccctcaagaaggctgcaaatgatgctgttggtgctgat 345

                                                                       
Query: 63  attgtcttgcatgtcaaaagcaagaatggggatggcattgacctgacggatgaaatactg 122
           |||||||||||||| |||   |||||||    |||  ||| | | | ||| || ||| ||
Sbjct: 346 attgtcttgcatgtgaaagctaagaatgacagtggtgttggcttaatggaggacatagtg 405

                                                                       
Query: 123 cgtgctgtttctgctcagtcgaaatctggcactccagttgttggtcacattgcaaaagag 182
           |||||||| | ||||||||| ||||| |     ||| ||||||||||||| |||||||||
Sbjct: 406 cgtgctgtctgtgctcagtcaaaatcagatgacccaattgttggtcacatcgcaaaagag 465

                                                                       
Query: 183 gcacctgagggtaagctccttgaaacatgggcagaaaagttatctggtggatctgtacaa 242
           |||||||||||||||||||||||| | |||||||| || || ||| |   |||||| |||
Sbjct: 466 gcacctgagggtaagctccttgaagcttgggcagacaaattgtctagctcatctgtgcaa 525

                                                                       
Query: 243 cttgcagacgtaacacaagggttttctgagctttttgctgtgaaagacgccccagagatc 302
           ||| ||||  ||||  | || || ||||||||||||||| |||| ||  || ||||||||
Sbjct: 526 cttacagatataacgaatggcttctctgagctttttgctatgaaggatacctcagagatc 585

                                                                       
Query: 303 atatgtgtgaagaaggctgcttacctaacttcatccgtgatgaaaaactttgtggtacca 362
           | |||||||||||||||  | |||||||| ||||| || |||||||| |||||||| || 
Sbjct: 586 acatgtgtgaagaaggcctcctacctaacctcatctgtaatgaaaaattttgtggttccg 645

                                                                       
Query: 363 accatggagaagattattgatgaggagagaaaagtctcacactcctcattgatggatgac 422
           |   | |||||| | |||||||| ||||| |||||  ||||||| |||||||||||||| 
Sbjct: 646 aagctagagaaggtgattgatgaagagaggaaagtgacacactcttcattgatggatgag 705

                                   
Query: 423 acggagaaggttattcttgatcct 446
           || || |||| |||||||||||||
Sbjct: 706 acagaaaaggctattcttgatcct 729



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>emb|AL663005.3|OSJN00208 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0062H02,
             complete sequence
          Length = 166747

 Score =  230 bits (116), Expect = 3e-57
 Identities = 362/444 (81%)
 Strand = Plus / Plus

                                                                         
Query: 3     aagaaagcaaatctcattggaaccctcaaggatgctgcaagtgaggctgttggttctgat 62
             |||||||||||||||||||| ||||||||| | ||||||| ||| ||||||||| |||||
Sbjct: 9607  aagaaagcaaatctcattggcaccctcaagaaggctgcaaatgatgctgttggtgctgat 9666

                                                                         
Query: 63    attgtcttgcatgtcaaaagcaagaatggggatggcattgacctgacggatgaaatactg 122
             |||||||||||||| |||   |||||||    |||  ||| | | | ||| || ||| ||
Sbjct: 9667  attgtcttgcatgtgaaagctaagaatgacagtggtgttggcttaatggaggacatagtg 9726

                                                                         
Query: 123   cgtgctgtttctgctcagtcgaaatctggcactccagttgttggtcacattgcaaaagag 182
             |||||||| | ||||||||| ||||| |     ||| ||||||||||||| |||||||||
Sbjct: 9727  cgtgctgtctgtgctcagtcaaaatcagatgacccaattgttggtcacatcgcaaaagag 9786

                                                                         
Query: 183   gcacctgagggtaagctccttgaaacatgggcagaaaagttatctggtggatctgtacaa 242
             |||||||||||||||||||||||| | |||||||| || || ||| |   |||||| |||
Sbjct: 9787  gcacctgagggtaagctccttgaagcttgggcagacaaattgtctagctcatctgtgcaa 9846

                                                                         
Query: 243   cttgcagacgtaacacaagggttttctgagctttttgctgtgaaagacgccccagagatc 302
             ||| ||||  ||||  | || || ||||||||||||||| |||| ||  || ||||||||
Sbjct: 9847  cttacagatataacgaatggcttctctgagctttttgctatgaaggatacctcagagatc 9906

                                                                         
Query: 303   atatgtgtgaagaaggctgcttacctaacttcatccgtgatgaaaaactttgtggtacca 362
             | |||||||||||||||  | |||||||| ||||| || |||||||| |||||||| || 
Sbjct: 9907  acatgtgtgaagaaggcctcctacctaacctcatctgtaatgaaaaattttgtggttccg 9966

                                                                         
Query: 363   accatggagaagattattgatgaggagagaaaagtctcacactcctcattgatggatgac 422
             |   | |||||| | |||||||| ||||| |||||  ||||||| |||||||||||||| 
Sbjct: 9967  aagctagagaaggtgattgatgaagagaggaaagtgacacactcttcattgatggatgag 10026

                                     
Query: 423   acggagaaggttattcttgatcct 446
             || || |||| |||||||||||||
Sbjct: 10027 acagaaaaggctattcttgatcct 10050



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  230 bits (116), Expect = 3e-57
 Identities = 362/444 (81%)
 Strand = Plus / Plus

                                                                            
Query: 3        aagaaagcaaatctcattggaaccctcaaggatgctgcaagtgaggctgttggttctgat 62
                |||||||||||||||||||| ||||||||| | ||||||| ||| ||||||||| |||||
Sbjct: 14852869 aagaaagcaaatctcattggcaccctcaagaaggctgcaaatgatgctgttggtgctgat 14852928

                                                                            
Query: 63       attgtcttgcatgtcaaaagcaagaatggggatggcattgacctgacggatgaaatactg 122
                |||||||||||||| |||   |||||||    |||  ||| | | | ||| || ||| ||
Sbjct: 14852929 attgtcttgcatgtgaaagctaagaatgacagtggtgttggcttaatggaggacatagtg 14852988

                                                                            
Query: 123      cgtgctgtttctgctcagtcgaaatctggcactccagttgttggtcacattgcaaaagag 182
                |||||||| | ||||||||| ||||| |     ||| ||||||||||||| |||||||||
Sbjct: 14852989 cgtgctgtctgtgctcagtcaaaatcagatgacccaattgttggtcacatcgcaaaagag 14853048

                                                                            
Query: 183      gcacctgagggtaagctccttgaaacatgggcagaaaagttatctggtggatctgtacaa 242
                |||||||||||||||||||||||| | |||||||| || || ||| |   |||||| |||
Sbjct: 14853049 gcacctgagggtaagctccttgaagcttgggcagacaaattgtctagctcatctgtgcaa 14853108

                                                                            
Query: 243      cttgcagacgtaacacaagggttttctgagctttttgctgtgaaagacgccccagagatc 302
                ||| ||||  ||||  | || || ||||||||||||||| |||| ||  || ||||||||
Sbjct: 14853109 cttacagatataacgaatggcttctctgagctttttgctatgaaggatacctcagagatc 14853168

                                                                            
Query: 303      atatgtgtgaagaaggctgcttacctaacttcatccgtgatgaaaaactttgtggtacca 362
                | |||||||||||||||  | |||||||| ||||| || |||||||| |||||||| || 
Sbjct: 14853169 acatgtgtgaagaaggcctcctacctaacctcatctgtaatgaaaaattttgtggttccg 14853228

                                                                            
Query: 363      accatggagaagattattgatgaggagagaaaagtctcacactcctcattgatggatgac 422
                |   | |||||| | |||||||| ||||| |||||  ||||||| |||||||||||||| 
Sbjct: 14853229 aagctagagaaggtgattgatgaagagaggaaagtgacacactcttcattgatggatgag 14853288

                                        
Query: 423      acggagaaggttattcttgatcct 446
                || || |||| |||||||||||||
Sbjct: 14853289 acagaaaaggctattcttgatcct 14853312



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  159 bits (80), Expect = 1e-35
 Identities = 236/287 (82%), Gaps = 2/287 (0%)
 Strand = Plus / Plus

                                                                            
Query: 160      ttgttggtcacattgcaaaagaggcacctgagggtaagctccttgaaacatgggcagaaa 219
                ||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||| |
Sbjct: 19307979 ttgttggtcacatcgcaaaagaggcacctgagggtaagctccttgaagcttgggcagaca 19308038

                                                                            
Query: 220      agttatctggtggatctgtacaacttgcagacgtaacacaagggttttctgagctttttg 279
                | || ||| |   |||||| |||||| ||||  ||||  | || || |||||||||||||
Sbjct: 19308039 aattgtctagctcatctgtgcaacttacagatataacgaatggcttctctgagctttttg 19308098

                                                                            
Query: 280      ctgtgaaagacgccccagagatcatatgtgtgaagaaggctgcttacctaacttcatccg 339
                || |||| ||  || ||||||||| |  ||||||||||||  | |||||||| ||||| |
Sbjct: 19308099 ctatgaaggatacctcagagatcaca--tgtgaagaaggcctcctacctaacctcatctg 19308156

                                                                            
Query: 340      tgatgaaaaactttgtggtaccaaccatggagaagattattgatgaggagagaaaagtct 399
                | |||||||| |||||||| || |   | |||||| | |||||||| ||||| |||||  
Sbjct: 19308157 taatgaaaaattttgtggttccgaagctagagaaggtgattgatgaagagaggaaagtga 19308216

                                                               
Query: 400      cacactcctcattgatggatgacacggagaaggttattcttgatcct 446
                ||||||| |||||||||||||| || || |||| |||||||||||||
Sbjct: 19308217 cacactcttcattgatggatgagacagaaaaggctattcttgatcct 19308263



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                            
Query: 3        aagaaagcaaatctcattggaaccctcaaggatgctgcaagtgaggctgttggttctgat 62
                |||||||||||||||||||| ||||||||| | ||| ||| ||| ||||||||| |||||
Sbjct: 19307822 aagaaagcaaatctcattggcaccctcaagaaggcttcaaatgatgctgttggtgctgat 19307881

                           
Query: 63       attgtcttgca 73
                |||||||||||
Sbjct: 19307882 attgtcttgca 19307892



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>dbj|AP004636.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0685B10
          Length = 148544

 Score =  159 bits (80), Expect = 1e-35
 Identities = 236/287 (82%), Gaps = 2/287 (0%)
 Strand = Plus / Plus

                                                                         
Query: 160   ttgttggtcacattgcaaaagaggcacctgagggtaagctccttgaaacatgggcagaaa 219
             ||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||| |
Sbjct: 37422 ttgttggtcacatcgcaaaagaggcacctgagggtaagctccttgaagcttgggcagaca 37481

                                                                         
Query: 220   agttatctggtggatctgtacaacttgcagacgtaacacaagggttttctgagctttttg 279
             | || ||| |   |||||| |||||| ||||  ||||  | || || |||||||||||||
Sbjct: 37482 aattgtctagctcatctgtgcaacttacagatataacgaatggcttctctgagctttttg 37541

                                                                         
Query: 280   ctgtgaaagacgccccagagatcatatgtgtgaagaaggctgcttacctaacttcatccg 339
             || |||| ||  || ||||||||| |  ||||||||||||  | |||||||| ||||| |
Sbjct: 37542 ctatgaaggatacctcagagatcaca--tgtgaagaaggcctcctacctaacctcatctg 37599

                                                                         
Query: 340   tgatgaaaaactttgtggtaccaaccatggagaagattattgatgaggagagaaaagtct 399
             | |||||||| |||||||| || |   | |||||| | |||||||| ||||| |||||  
Sbjct: 37600 taatgaaaaattttgtggttccgaagctagagaaggtgattgatgaagagaggaaagtga 37659

                                                            
Query: 400   cacactcctcattgatggatgacacggagaaggttattcttgatcct 446
             ||||||| |||||||||||||| || || |||| |||||||||||||
Sbjct: 37660 cacactcttcattgatggatgagacagaaaaggctattcttgatcct 37706



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                         
Query: 3     aagaaagcaaatctcattggaaccctcaaggatgctgcaagtgaggctgttggttctgat 62
             |||||||||||||||||||| ||||||||| | ||| ||| ||| ||||||||| |||||
Sbjct: 37265 aagaaagcaaatctcattggcaccctcaagaaggcttcaaatgatgctgttggtgctgat 37324

                        
Query: 63    attgtcttgca 73
             |||||||||||
Sbjct: 37325 attgtcttgca 37335



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>dbj|AP003872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1118_A03
          Length = 109873

 Score =  159 bits (80), Expect = 1e-35
 Identities = 236/287 (82%), Gaps = 2/287 (0%)
 Strand = Plus / Plus

                                                                         
Query: 160   ttgttggtcacattgcaaaagaggcacctgagggtaagctccttgaaacatgggcagaaa 219
             ||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||| |
Sbjct: 80992 ttgttggtcacatcgcaaaagaggcacctgagggtaagctccttgaagcttgggcagaca 81051

                                                                         
Query: 220   agttatctggtggatctgtacaacttgcagacgtaacacaagggttttctgagctttttg 279
             | || ||| |   |||||| |||||| ||||  ||||  | || || |||||||||||||
Sbjct: 81052 aattgtctagctcatctgtgcaacttacagatataacgaatggcttctctgagctttttg 81111

                                                                         
Query: 280   ctgtgaaagacgccccagagatcatatgtgtgaagaaggctgcttacctaacttcatccg 339
             || |||| ||  || ||||||||| |  ||||||||||||  | |||||||| ||||| |
Sbjct: 81112 ctatgaaggatacctcagagatcaca--tgtgaagaaggcctcctacctaacctcatctg 81169

                                                                         
Query: 340   tgatgaaaaactttgtggtaccaaccatggagaagattattgatgaggagagaaaagtct 399
             | |||||||| |||||||| || |   | |||||| | |||||||| ||||| |||||  
Sbjct: 81170 taatgaaaaattttgtggttccgaagctagagaaggtgattgatgaagagaggaaagtga 81229

                                                            
Query: 400   cacactcctcattgatggatgacacggagaaggttattcttgatcct 446
             ||||||| |||||||||||||| || || |||| |||||||||||||
Sbjct: 81230 cacactcttcattgatggatgagacagaaaaggctattcttgatcct 81276



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                         
Query: 3     aagaaagcaaatctcattggaaccctcaaggatgctgcaagtgaggctgttggttctgat 62
             |||||||||||||||||||| ||||||||| | ||| ||| ||| ||||||||| |||||
Sbjct: 80835 aagaaagcaaatctcattggcaccctcaagaaggcttcaaatgatgctgttggtgctgat 80894

                        
Query: 63    attgtcttgca 73
             |||||||||||
Sbjct: 80895 attgtcttgca 80905



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>gb|AF545812.1| Zea mays global transcription factor group C 102 (gtc102) mRNA,
           complete cds
          Length = 3505

 Score =  145 bits (73), Expect = 1e-31
 Identities = 148/173 (85%)
 Strand = Plus / Plus

                                                                       
Query: 267 tctgagctttttgctgtgaaagacgccccagagatcatatgtgtgaagaaggctgcttac 326
           |||||||| ||||||||||| ||| || ||||||||| ||||||||||||||||||||||
Sbjct: 548 tctgagctctttgctgtgaaggacaccacagagatcacatgtgtgaagaaggctgcttac 607

                                                                       
Query: 327 ctaacttcatccgtgatgaaaaactttgtggtaccaaccatggagaagattattgatgag 386
            |||||||||||||  ||||||| |||||| | || |   |||||||| |||| ||||||
Sbjct: 608 ttaacttcatccgttctgaaaaattttgtgattcctaagttggagaaggttatcgatgag 667

                                                                
Query: 387 gagagaaaagtctcacactcctcattgatggatgacacggagaaggttattct 439
           ||||   ||||||||||||| || |||||||||||| | ||||||| ||||||
Sbjct: 668 gagaaggaagtctcacactcatcgttgatggatgacgcagagaaggctattct 720



 Score =  113 bits (57), Expect = 5e-22
 Identities = 186/229 (81%)
 Strand = Plus / Plus

                                                                       
Query: 1   agaagaaagcaaatctcattggaaccctcaaggatgctgcaagtgaggctgttggttctg 60
           ||||||||| |||||| ||||| ||||||||| | |||||||  ||||||||||||  ||
Sbjct: 282 agaagaaaggaaatcttattgggaccctcaagaaggctgcaaacgaggctgttggtgttg 341

                                                                       
Query: 61  atattgtcttgcatgtcaaaagcaagaatggggatggcattgacctgacggatgaaatac 120
           | ||||| |||||||| |||| ||||||| | |||||   |||| ||| |||||| ||| 
Sbjct: 342 acattgtgttgcatgtgaaaaccaagaatagtgatggtgctgacttgatggatgacatag 401

                                                                       
Query: 121 tgcgtgctgtttctgctcagtcgaaatctggcactccagttgttggtcacattgcaaaag 180
           ||| ||||| |  |  ||| || ||||| |  |  ||||||||||| ||||| || ||||
Sbjct: 402 tgcatgctgctcgtaatcaatcaaaatcagataagccagttgttggacacatagccaaag 461

                                                            
Query: 181 aggcacctgagggtaagctccttgaaacatgggcagaaaagttatctgg 229
           ||||||||||||||||||| ||||||||||||  | |||| ||||||||
Sbjct: 462 aggcacctgagggtaagcttcttgaaacatggataaaaaaattatctgg 510



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>emb|AL663021.4|OSJN00218 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041M06,
              complete sequence
          Length = 107014

 Score =  135 bits (68), Expect = 1e-28
 Identities = 170/204 (83%)
 Strand = Plus / Plus

                                                                          
Query: 3      aagaaagcaaatctcattggaaccctcaaggatgctgcaagtgaggctgttggttctgat 62
              |||||||||||||||||||| ||||||||| | ||||||| ||| ||||||||| |||||
Sbjct: 106807 aagaaagcaaatctcattggcaccctcaagaaggctgcaaatgatgctgttggtgctgat 106866

                                                                          
Query: 63     attgtcttgcatgtcaaaagcaagaatggggatggcattgacctgacggatgaaatactg 122
              |||||||||||||| |||   |||||||    |||  ||| | | | ||| || ||| ||
Sbjct: 106867 attgtcttgcatgtgaaagctaagaatgacagtggtgttggcttaatggaggacatagtg 106926

                                                                          
Query: 123    cgtgctgtttctgctcagtcgaaatctggcactccagttgttggtcacattgcaaaagag 182
              |||||||| | ||||||||| ||||| |     ||| ||||||||||||| |||||||||
Sbjct: 106927 cgtgctgtctgtgctcagtcaaaatcagatgacccaattgttggtcacatcgcaaaagag 106986

                                      
Query: 183    gcacctgagggtaagctccttgaa 206
              ||||||||||||||||||||||||
Sbjct: 106987 gcacctgagggtaagctccttgaa 107010



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>gb|AF040651.2| Caenorhabditis elegans cosmid W04H10, complete sequence
          Length = 16137

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 3     aagaaagcaaatctcattggaa 24
             ||||||||||||||||||||||
Sbjct: 14799 aagaaagcaaatctcattggaa 14820



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>gb|DQ103595.1| Arabidopsis arenosa clone BAC 28N14, complete sequence
          Length = 132056

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 359   accaaccatggagaagattat 379
             |||||||||||||||||||||
Sbjct: 14067 accaaccatggagaagattat 14047



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>gb|DP000022.1| Microcebus murinus target 1 genomic scaffold
          Length = 1595145

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 172    ttgcaaaagaggcacctgagg 192
              |||||||||||||||||||||
Sbjct: 544363 ttgcaaaagaggcacctgagg 544383



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>gb|AC145439.4| Microcebus murinus clone CH257-441K3, complete sequence
          Length = 215533

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 172    ttgcaaaagaggcacctgagg 192
              |||||||||||||||||||||
Sbjct: 186404 ttgcaaaagaggcacctgagg 186424



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>ref|XM_508303.1| PREDICTED: Pan troglodytes similar to RIKEN cDNA 3830422K02
           (LOC451046), mRNA
          Length = 998

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 51  gttggttctgatattgtctt 70
           ||||||||||||||||||||
Sbjct: 843 gttggttctgatattgtctt 862



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>gb|AC169994.1| Rhesus Macaque  BAC CH250-169F18 (Children's Hospital Oakland Research
             Institute Rhesus macaque Adult Male BAC Library) complete
             sequence
          Length = 169688

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 205   aaacatgggcagaaaagttatctg 228
             |||||||||||||||| |||||||
Sbjct: 55144 aaacatgggcagaaaatttatctg 55167



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>gb|AC008348.5| Drosophila melanogaster clone BACR02I11, complete sequence
          Length = 191467

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     aaccctcaaggatgctgcaa 42
              ||||||||||||||||||||
Sbjct: 142784 aaccctcaaggatgctgcaa 142765



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>gb|AC008203.8| Drosophila melanogaster clone BACR29F06, complete sequence
          Length = 174729

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 152    cactccagttgttggtcaca 171
              ||||||||||||||||||||
Sbjct: 117488 cactccagttgttggtcaca 117507



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>gb|AC005714.11| Drosophila melanogaster clone BACR48M13, complete sequence
          Length = 177736

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    aaccctcaaggatgctgcaa 42
             ||||||||||||||||||||
Sbjct: 49080 aaccctcaaggatgctgcaa 49061



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>ref|XM_544498.2| PREDICTED: Canis familiaris similar to myomesin family, member 3
            (LOC487372), mRNA
          Length = 4350

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 280  ctgtgaaagacgccccagag 299
            ||||||||||||||||||||
Sbjct: 1874 ctgtgaaagacgccccagag 1893



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>gb|AF466596.1| Aedes aegypti isolate AEA_CLU25 putative secreted protein mRNA,
           complete cds
          Length = 1035

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 127 ctgtttctgctcagtcgaaa 146
           ||||||||||||||||||||
Sbjct: 847 ctgtttctgctcagtcgaaa 828



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>emb|BX908755.10| Zebrafish DNA sequence from clone DKEY-67F11 in linkage group 3,
             complete sequence
          Length = 160005

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     agaagaaagcaaatctcatt 20
             ||||||||||||||||||||
Sbjct: 31160 agaagaaagcaaatctcatt 31141



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>gb|AC104361.3| Homo sapiens chromosome 11, clone RP11-950A3, complete sequence
          Length = 145172

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     gttggttctgatattgtctt 70
              ||||||||||||||||||||
Sbjct: 109157 gttggttctgatattgtctt 109138



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>gb|AC099340.3| Homo sapiens BAC clone RP11-214O14 from 4, complete sequence
          Length = 164958

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 266   ttctgagctttttgctgtgaaaga 289
             ||||| ||||||||||||||||||
Sbjct: 14090 ttctgtgctttttgctgtgaaaga 14067



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>ref|NM_142974.2| Drosophila melanogaster CG17786-RA (CG17786), mRNA
          Length = 4094

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 152 cactccagttgttggtcaca 171
           ||||||||||||||||||||
Sbjct: 762 cactccagttgttggtcaca 743



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>gb|AC104825.4| Homo sapiens BAC clone RP11-774O3 from 4, complete sequence
          Length = 134369

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 263  gttttctgagctttttgctg 282
            ||||||||||||||||||||
Sbjct: 7751 gttttctgagctttttgctg 7732



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>gb|AY070899.1| Drosophila melanogaster RE01338 full length cDNA
          Length = 4102

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 152 cactccagttgttggtcaca 171
           ||||||||||||||||||||
Sbjct: 763 cactccagttgttggtcaca 744



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>emb|BX931837.2| Gallus gallus finished cDNA, clone ChEST553g9
          Length = 977

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 228 ggtggatctgtacaacttgcagac 251
           ||||| ||||||||||||||||||
Sbjct: 4   ggtggctctgtacaacttgcagac 27



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>gb|AF003529.2| Homo sapiens glypican 3 (GPC3) gene, partial cds and flanking repeat
             regions
          Length = 165658

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   gttggtcacattgcaaaaga 181
             ||||||||||||||||||||
Sbjct: 49290 gttggtcacattgcaaaaga 49309



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>gb|AE003746.3| Drosophila melanogaster chromosome 3R, section 84 of 118 of the complete
              sequence
          Length = 218498

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 152    cactccagttgttggtcaca 171
              ||||||||||||||||||||
Sbjct: 186105 cactccagttgttggtcaca 186124



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>gb|AE003457.4| Drosophila melanogaster chromosome 2R, section 65 of 73 of the complete
             sequence
          Length = 307324

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    aaccctcaaggatgctgcaa 42
             ||||||||||||||||||||
Sbjct: 84083 aaccctcaaggatgctgcaa 84064



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>dbj|AP001107.5| Homo sapiens genomic DNA, chromosome 11q clone:RP11-867G23, complete
             sequences
          Length = 196662

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 298   agatcatatgtgtgaagaag 317
             ||||||||||||||||||||
Sbjct: 33997 agatcatatgtgtgaagaag 33978



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>emb|BX908786.9| Zebrafish DNA sequence from clone CH211-13O8 in linkage group 3,
             complete sequence
          Length = 121030

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     agaagaaagcaaatctcatt 20
             ||||||||||||||||||||
Sbjct: 75484 agaagaaagcaaatctcatt 75503



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>gb|AC148321.7| Mus musculus BAC clone RP24-512H17 from 19, complete sequence
          Length = 210790

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 261   gggttttctgagctttttgc 280
             ||||||||||||||||||||
Sbjct: 38287 gggttttctgagctttttgc 38268



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>gb|U44469.1|HIVU44469 Human immunodeficiency virus type 1 nef mRNA, complete cds, patient
           #D, clone 18
          Length = 894

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 413 gatggatgacacggagaagg 432
           ||||||||||||||||||||
Sbjct: 605 gatggatgacacggagaagg 624



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>emb|AL833800.6| Mouse DNA sequence from clone RP23-147P20 on chromosome X, complete
             sequence
          Length = 199542

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    tctgatattgtcttgcatgt 76
             ||||||||||||||||||||
Sbjct: 70169 tctgatattgtcttgcatgt 70188


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,245,638
Number of Sequences: 3902068
Number of extensions: 4245638
Number of successful extensions: 117065
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116928
Number of HSP's gapped (non-prelim): 119
length of query: 452
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 430
effective length of database: 17,147,199,772
effective search space: 7373295901960
effective search space used: 7373295901960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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