Clone Information

BLAST Search Result

Clone Name	bastl25g02
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	SAPS3_CHICK (Q5F471) SAPS domain family member 3	47	2e-05
2	SAPS3_MOUSE (Q922D4) SAPS domain family member 3	47	3e-05
3	SAPS3_HUMAN (Q5H9R7) SAPS domain family member 3 (Sporulation-in...	47	3e-05
4	SAPS2_MOUSE (Q8R3Q2) SAPS domain family member 2	45	1e-04
5	SAP3B_XENLA (Q6NRF1) SAPS domain family member 3-B	44	1e-04
6	SAPS2_HUMAN (O75170) SAPS domain family member 2	44	1e-04
7	SAP3A_XENLA (Q6NRI0) SAPS domain family member 3-A	44	2e-04
8	SAPS1_MOUSE (Q7TSI3) SAPS domain family member 1	42	7e-04
9	SAPS1_HUMAN (Q9UPN7) SAPS domain family member 1	40	0.003
10	ZN759_HUMAN (Q8NAF0) Zinc finger protein 579	34	0.14
11	IF2_CHRVO (Q7NY13) Translation initiation factor IF-2	33	0.24
12	Y112_ADE02 (P03289) Hypothetical protein F-112	33	0.24
13	ZN297_MOUSE (Q9Z0G7) Zinc finger protein 297 (BING1 protein)	32	0.70
14	CI010_HUMAN (Q9NZB2) Protein C9orf10	32	0.91
15	FOXJ2_MOUSE (Q9ES18) Forkhead box protein J2 (Fork head homologo...	32	0.91
16	TOP3B_MOUSE (Q9Z321) DNA topoisomerase 3-beta-1 (EC 5.99.1.2) (D...	31	1.2
17	YKY4_CAEEL (Q17963) Hypothetical WD-repeat protein C14B1.4	31	1.2
18	SOX12_HUMAN (O15370) SOX-12 protein (SOX-22 protein)	31	1.2
19	IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2	31	1.6
20	VGLB_BHV1P (P17471) Glycoprotein I precursor (Glycoprotein GVP-6...	31	1.6
21	HCN4_RAT (Q9JKA7) Potassium/sodium hyperpolarization-activated c...	31	1.6
22	HRX_MOUSE (P55200) Zinc finger protein HRX (ALL-1) (Fragment)	31	1.6
23	VGLB_BHV1C (P12640) Glycoprotein I precursor (Glycoprotein GVP-6...	31	1.6
24	SMR1_MOUSE (Q61900) Submaxillary gland androgen-regulated protei...	31	1.6
25	CAP2_DICDI (P34122) CABP1-related protein p31/p34	31	1.6
26	CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor	31	1.6
27	PACC_ASPGI (Q5XL24) pH-response transcription factor pacC/RIM101	30	2.0
28	MP83_MYCTU (P0A670) Cell surface lipoprotein MPT83 precursor (Li...	30	2.0
29	MP83_MYCBO (P0A671) Cell surface lipoprotein MPB83 precursor (Li...	30	2.0
30	ARTE_ARATH (Q9FYL3) Protein ARTEMIS, chloroplast precursor (Arab...	30	2.0
31	WIRE_HUMAN (Q8TF74) WIP-related protein (WASP-interacting protei...	30	2.0
32	HTPX_RHILO (Q98ET0) Probable protease htpX homolog (EC 3.4.24.-)	30	2.0
33	GRLF1_HUMAN (Q9NRY4) Glucocorticoid receptor DNA-binding factor ...	30	2.0
34	NPAS3_MOUSE (Q9QZQ0) Neuronal PAS domain protein 3 (Neuronal PAS...	30	2.0
35	MDC1_PIG (Q767L8) Mediator of DNA damage checkpoint protein 1	30	2.0
36	COBA1_RAT (P20909) Collagen alpha-1(XI) chain precursor (Fragment)	30	2.7
37	AREA_EMENI (P17429) Nitrogen regulatory protein areA	30	2.7
38	CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long...	30	2.7
39	ACHA4_HUMAN (P43681) Neuronal acetylcholine receptor protein, al...	30	2.7
40	TESK1_RAT (Q63572) Dual specificity testis-specific protein kina...	30	2.7
41	MEF2D_XENLA (Q03413) Myocyte-specific enhancer factor 2D homolog...	30	2.7
42	CU086_HUMAN (P59089) Protein C21orf86	30	2.7
43	ZN759_MOUSE (Q80VM4) Zinc finger protein 579	30	2.7
44	RORA_MOUSE (P51448) Nuclear receptor ROR-alpha (Nuclear receptor...	30	3.5
45	PRP45_USTMA (Q4PB95) Pre-mRNA-splicing factor PRP45 (Pre-mRNA-pr...	30	3.5
46	ZN297_HUMAN (O15209) Zinc finger protein 297 (BING1 protein) (Zi...	30	3.5
47	AGRN_HUMAN (O00468) Agrin precursor	30	3.5
48	MAST3_HUMAN (O60307) Microtubule-associated serine/threonine-pro...	29	4.5
49	ZYG1_CAEEL (Q9GT24) Probable serine/threonine-protein kinase zyg...	29	4.5
50	PKD2_HUMAN (Q13563) Polycystin-2 (Autosomal dominant polycystic ...	29	4.5
51	ADA2A_PIG (P18871) Alpha-2A adrenergic receptor (Alpha-2A adreno...	29	4.5
52	RP54_XANCV (P77998) RNA polymerase sigma-54 factor	29	4.5
53	HCN4_MOUSE (O70507) Potassium/sodium hyperpolarization-activated...	29	4.5
54	US02_EHV1B (P28964) Gene 68 protein	29	5.9
55	SIN3B_HUMAN (O75182) Paired amphipathic helix protein Sin3b (Tra...	29	5.9
56	RL1_HHV2H (P28283) Neurovirulence factor RL1 (Neurovirulence fac...	29	5.9
57	CJ078_MOUSE (Q8BP27) Protein C10orf78 homolog	29	5.9
58	YAU8_SCHPO (Q10163) Hypothetical protein C26A3.08 in chromosome I	29	5.9
59	DIDO1_MOUSE (Q8C9B9) Death-inducer obliterator 1 (DIO-1) (Death-...	29	5.9
60	TOP3B_HUMAN (O95985) DNA topoisomerase 3-beta-1 (EC 5.99.1.2) (D...	29	5.9
61	SOX12_MOUSE (Q04890) SOX-12 protein	29	5.9
62	MAGI2_MOUSE (Q9WVQ1) Membrane-associated guanylate kinase, WW an...	29	5.9
63	KIP1_YEAST (P28742) Kinesin-like protein KIP1 (Chromosome instab...	29	5.9
64	COJA1_HUMAN (Q14993) Collagen alpha-1(XIX) chain precursor (Coll...	29	5.9
65	IF2_PSEU2 (Q4ZNR2) Translation initiation factor IF-2	29	5.9
66	MCHR1_MACMU (Q8MJ89) Melanin-concentrating hormone receptor 1 (M...	28	7.7
67	CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor	28	7.7
68	ACHA4_PANTR (Q5IS77) Neuronal acetylcholine receptor protein, al...	28	7.7
69	CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Conta...	28	7.7
70	9KD_HUMAN (P13994) 9 kDa protein	28	7.7
71	PHC1_MOUSE (Q64028) Polyhomeotic-like protein 1 (mPH1) (Early de...	28	7.7
72	NU155_HUMAN (O75694) Nuclear pore complex protein Nup155 (Nucleo...	28	7.7
73	CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contain...	28	7.7
74	MYSC_ACACA (P10569) Myosin IC heavy chain	28	7.7

>SAPS3_CHICK (Q5F471) SAPS domain family member 3|
          Length = 873

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 22/64 (34%), Positives = 38/64 (59%)
 Frame = +1

Query: 250 MFWRMTGLSAASPVDTILDKENFTXXXXXXXXXIIQECXALNTRLINFLRDKAQVEQLLR 429
           MFW+   L ++S +DT+L++E+ T         ++QEC A N +LI FL     +E L+ 
Sbjct: 1   MFWKFD-LHSSSHIDTLLEREDVTLKELMDEEDVLQECKAQNRKLIEFLLKSECLEDLVS 59

Query: 430 YVVE 441
           +++E
Sbjct: 60  FIIE 63

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>SAPS3_MOUSE (Q922D4) SAPS domain family member 3|
          Length = 844

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 22/64 (34%), Positives = 38/64 (59%)
 Frame = +1

Query: 250 MFWRMTGLSAASPVDTILDKENFTXXXXXXXXXIIQECXALNTRLINFLRDKAQVEQLLR 429
           MFW+   L ++S +DT+L++E+ T         ++QEC A N +LI FL     +E L+ 
Sbjct: 1   MFWKFD-LHSSSHIDTLLEREDVTLKELMDEEDVLQECKAQNRKLIEFLLKAECLEDLVS 59

Query: 430 YVVE 441
           +++E
Sbjct: 60  FIIE 63

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>SAPS3_HUMAN (Q5H9R7) SAPS domain family member 3 (Sporulation-induced|
           transcript 4-associated protein SAPL) (Protein
           phosphatase 6 regulatory subunit 3)
          Length = 873

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 22/64 (34%), Positives = 38/64 (59%)
 Frame = +1

Query: 250 MFWRMTGLSAASPVDTILDKENFTXXXXXXXXXIIQECXALNTRLINFLRDKAQVEQLLR 429
           MFW+   L ++S +DT+L++E+ T         ++QEC A N +LI FL     +E L+ 
Sbjct: 1   MFWKFD-LHSSSHIDTLLEREDVTLKELMDEEDVLQECKAQNRKLIEFLLKAECLEDLVS 59

Query: 430 YVVE 441
           +++E
Sbjct: 60  FIIE 63

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>SAPS2_MOUSE (Q8R3Q2) SAPS domain family member 2|
          Length = 923

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 23/64 (35%), Positives = 37/64 (57%)
 Frame = +1

Query: 250 MFWRMTGLSAASPVDTILDKENFTXXXXXXXXXIIQECXALNTRLINFLRDKAQVEQLLR 429
           MFW+   L+  S VD +LDKE+ T         I+QEC A N +L++FL  +  +E+L+ 
Sbjct: 1   MFWKFD-LNTTSHVDKLLDKEHVTLQELMDEDDILQECKAQNQKLLDFLCRQQCMEELVN 59

Query: 430 YVVE 441
            + +
Sbjct: 60  LITQ 63

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>SAP3B_XENLA (Q6NRF1) SAPS domain family member 3-B|
          Length = 850

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 21/64 (32%), Positives = 36/64 (56%)
 Frame = +1

Query: 250 MFWRMTGLSAASPVDTILDKENFTXXXXXXXXXIIQECXALNTRLINFLRDKAQVEQLLR 429
           MFW+   L ++S +DT+L+++  T         I+QEC A N +L+ FL     +E L+ 
Sbjct: 1   MFWKFD-LHSSSHIDTLLERDEVTLKELMDEEDILQECKAQNRKLVEFLLKSECLEDLVT 59

Query: 430 YVVE 441
           ++ E
Sbjct: 60  FITE 63

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>SAPS2_HUMAN (O75170) SAPS domain family member 2|
          Length = 927

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 23/64 (35%), Positives = 37/64 (57%)
 Frame = +1

Query: 250 MFWRMTGLSAASPVDTILDKENFTXXXXXXXXXIIQECXALNTRLINFLRDKAQVEQLLR 429
           MFW+   L+  S VD +LDKE+ T         I+QEC A N +L++FL  +  +E+L+ 
Sbjct: 1   MFWKFD-LNTTSHVDKLLDKEHVTLQELMDEDDILQECKAQNQKLLDFLCRQQCMEELVS 59

Query: 430 YVVE 441
            + +
Sbjct: 60  LITQ 63

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>SAP3A_XENLA (Q6NRI0) SAPS domain family member 3-A|
          Length = 852

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 21/64 (32%), Positives = 36/64 (56%)
 Frame = +1

Query: 250 MFWRMTGLSAASPVDTILDKENFTXXXXXXXXXIIQECXALNTRLINFLRDKAQVEQLLR 429
           MFW+   L ++S +DT+L+++  T         I+QEC A N +L+ FL     +E L+ 
Sbjct: 1   MFWKFD-LHSSSHIDTLLERDEVTLKELMDEEDILQECKAQNRKLVEFLLKAECLEDLVT 59

Query: 430 YVVE 441
           ++ E
Sbjct: 60  FITE 63

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>SAPS1_MOUSE (Q7TSI3) SAPS domain family member 1|
          Length = 856

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 18/64 (28%), Positives = 38/64 (59%)
 Frame = +1

Query: 250 MFWRMTGLSAASPVDTILDKENFTXXXXXXXXXIIQECXALNTRLINFLRDKAQVEQLLR 429
           MFW+   L  +S +DT+L+KE+ +         ++QEC  +N +L++FL   + ++ ++ 
Sbjct: 1   MFWKFD-LHTSSHLDTLLEKEDLSLPELLDEEDVLQECKVVNRKLLDFLLQPSHLQAMVA 59

Query: 430 YVVE 441
           +V +
Sbjct: 60  WVTQ 63

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>SAPS1_HUMAN (Q9UPN7) SAPS domain family member 1|
          Length = 881

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 17/64 (26%), Positives = 37/64 (57%)
 Frame = +1

Query: 250 MFWRMTGLSAASPVDTILDKENFTXXXXXXXXXIIQECXALNTRLINFLRDKAQVEQLLR 429
           MFW+   L  +S +DT+L++E+ +         ++QEC  +N +L++FL     ++ ++ 
Sbjct: 1   MFWKFD-LHTSSHLDTLLEREDLSLPELLDEEDVLQECKVVNRKLLDFLLQPPHLQAMVA 59

Query: 430 YVVE 441
           +V +
Sbjct: 60  WVTQ 63

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>ZN759_HUMAN (Q8NAF0) Zinc finger protein 579|
          Length = 562

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 19/41 (46%), Positives = 20/41 (48%)
 Frame = +1

Query: 112 DPLAPLPIHPSSPVAQSGRRRPDSRGFGRGLAPPGAGNPRS 234
           DP  P P   S P    GR R   RG GRG    GAG PR+
Sbjct: 2   DPQPPPPAQGSPPHRGRGRGRGRGRGRGRGRGRGGAGAPRA 42

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>IF2_CHRVO (Q7NY13) Translation initiation factor IF-2|
          Length = 964

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = -3

Query: 221 PAPGGASPRPNPRESGRRRPDWATGEEGWIGRGA-SGSNWDRGG*EAHERRKKQHAF 54
           PAPGG+ P    +   R   D   G  G   +G  +G++W   G +   ++  QHAF
Sbjct: 316 PAPGGSRPGKGKKGGERSWDDNKKGGRGLKTKGGDAGNDWKSRGGKGRNKQNNQHAF 372

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>Y112_ADE02 (P03289) Hypothetical protein F-112|
          Length = 112

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 11/63 (17%)
 Frame = +1

Query: 88  SHPPRSQFDPLAPLPIHPSSPVAQSG-----------RRRPDSRGFGRGLAPPGAGNPRS 234
           +HPP +   P  P+      P   +G           RR P +RG  RG  PPG    R 
Sbjct: 26  AHPPHAMGSPTQPIRARACRPRMAAGARLARMQDRLLRRAPAARGLYRGRRPPGRDAARP 85

Query: 235 TAA 243
           T A
Sbjct: 86  TTA 88

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>ZN297_MOUSE (Q9Z0G7) Zinc finger protein 297 (BING1 protein)|
          Length = 638

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
 Frame = +1

Query: 1   SSNPPSPNQIKPKESPNRKACC--FFLLSCASHPPRSQFDPLAPLPIHPSSPVAQSGR-- 168
           + +P S N   P+ES +  +     F+ S A    R    P+ P P+  S+    SG+  
Sbjct: 201 NQSPSSSNYFSPRESTDFSSTSQDAFVASAAGSGNRRDGGPVFPAPVVGSAGTT-SGKLL 259

Query: 169 ----RRPDSRGFGRGLAPPGAGNPRS 234
                  D  G GRG   PGAG  RS
Sbjct: 260 LEADELCDDGGDGRGAVAPGAGLRRS 285

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>CI010_HUMAN (Q9NZB2) Protein C9orf10|
          Length = 1069

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +1

Query: 109  FDPLAPLPIHPSSPVAQSGRRRPDSRGFGRGLAPP-GAGNPRSTAAATMFWRMTGLSAAS 285
            F P   LP +P+S   +     P S+G GRG A   G G P     AT  +R   ++AAS
Sbjct: 857  FPPPPALPFYPASAYPRHFGPVPPSQGRGRGFAGVCGFGGPYGETVATGPYRAFRVAAAS 916

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>FOXJ2_MOUSE (Q9ES18) Forkhead box protein J2 (Fork head homologous X)|
          Length = 565

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 9/88 (10%)
 Frame = +1

Query: 1   SSNPPSPNQI---------KPKESPNRKACCFFLLSCASHPPRSQFDPLAPLPIHPSSPV 153
           S  PP+P++I         KP+ S N+       ++   HP  S   P  P P++P S  
Sbjct: 477 SHRPPAPSRITDSCALTSGKPEPSMNQ-------VNSYGHPQASHLYP-GPAPMYPISTQ 528

Query: 154 AQSGRRRPDSRGFGRGLAPPGAGNPRST 237
             +G  RP      R   PP   N   T
Sbjct: 529 DSAGYNRPAHHMVPRPPVPPPGANEEIT 556

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>TOP3B_MOUSE (Q9Z321) DNA topoisomerase 3-beta-1 (EC 5.99.1.2) (DNA|
           topoisomerase III beta-1)
          Length = 862

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +1

Query: 148 PVAQSGRRRPDSRGFGRGLAPPGAGNPR 231
           P+ + G  R   RG GRG  PPG  NPR
Sbjct: 821 PMHRGGPGRRQGRGRGRGRRPPGKPNPR 848

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>YKY4_CAEEL (Q17963) Hypothetical WD-repeat protein C14B1.4|
          Length = 376

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -3

Query: 287 GEAAERPVMRQNMVAAAVDLGFPAPGGASPRPNPRESG 174
           G +A  P    N ++ +   G PAPG ++  PNP  +G
Sbjct: 31  GSSAPAPSTSPNSISPSNPTGTPAPGASAQTPNPNAAG 68

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>SOX12_HUMAN (O15370) SOX-12 protein (SOX-22 protein)|
          Length = 315

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
 Frame = -3

Query: 266 VMRQNMVAAAVDLGFPAPGGASPRPNPRESGRRRPDWATGEEGWIGRGASG-SNWDRGG* 90
           +++Q    A  D G P PG     P P E G R P W     G I R  +    W +   
Sbjct: 1   MVQQRGARAKRDGGPPPPG-----PGPAEEGAREPGWCKTPSGHIKRPMNAFMVWSQ--- 52

Query: 89  EAHERRK 69
             HERRK
Sbjct: 53  --HERRK 57

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>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2|
          Length = 969

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 8/73 (10%)
 Frame = -3

Query: 287 GEAAERPVMRQNMVAAAVDLG------FPAPGGASPRPNPRESGRRRPDWATGEEGWIGR 126
           G+ A RP        AA   G       P+PG   PRPNP    +R P       G  GR
Sbjct: 217 GQGAPRPGATPGPRPAAAQGGPRPGGPRPSPGSMPPRPNPGAMPQRTPRPGPSAGGRPGR 276

Query: 125 --GASGSNWDRGG 93
             GA G+    GG
Sbjct: 277 PGGAPGAGRPGGG 289

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>VGLB_BHV1P (P17471) Glycoprotein I precursor (Glycoprotein GVP-6)|
           (Glycoprotein 11A) (Glycoprotein 16) (Glycoprotein G130)
          Length = 928

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +1

Query: 196 RGLAPPGAGNPRSTAAATMFWRMTGLSAASP 288
           RG A PGAG  R+  AA + W    L  A+P
Sbjct: 34  RGPAAPGAGGARAALAAALLWATWALLLAAP 64

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>HCN4_RAT (Q9JKA7) Potassium/sodium hyperpolarization-activated cyclic|
            nucleotide-gated channel 4
          Length = 1198

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 28/83 (33%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
 Frame = +1

Query: 10   PPSPNQIKPKESPNRKACCFFLLS--CASHPPRSQFDPLAPLPIHPSSPVAQSGRRRPDS 183
            PP P+   P  SP +       LS   A+ PP +   P  P P  PS     SG   P +
Sbjct: 959  PPPPSSRSPSSSPGQLGQPPGELSPGLAAGPPSTPETP--PRPERPSFMAGASGGASPVA 1016

Query: 184  RGFGRGLAPPG--AGNPRSTAAA 246
                 GL+PPG   G PR+  +A
Sbjct: 1017 FTPRGGLSPPGHSPGPPRTFPSA 1039

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>HRX_MOUSE (P55200) Zinc finger protein HRX (ALL-1) (Fragment)|
          Length = 3866

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +1

Query: 97   PRSQFDPLAPLPIH-PSSPVAQSGRRRPDSRGFGRGLAPPGAGNPRSTAAATMF 255
            P+   +P +P P+H P+ P+  + R R DS        PPG  + R  A   M+
Sbjct: 1731 PKGPGEPDSPTPLHPPTPPILSTDRSREDSPELN---PPPGIDDNRQCALCLMY 1781

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>VGLB_BHV1C (P12640) Glycoprotein I precursor (Glycoprotein GVP-6)|
           (Glycoprotein 11A) (Glycoprotein 16) (Glycoprotein G130)
           (Glycoprotein B)
          Length = 932

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +1

Query: 196 RGLAPPGAGNPRSTAAATMFWRMTGLSAASP 288
           RG A PGAG  R+  AA + W    L  A+P
Sbjct: 34  RGPAAPGAGGARAALAAALLWATWALLLAAP 64

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>SMR1_MOUSE (Q61900) Submaxillary gland androgen-regulated protein 1 precursor|
           (Salivary protein MSG1)
          Length = 147

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 22/60 (36%), Positives = 23/60 (38%), Gaps = 5/60 (8%)
 Frame = +1

Query: 64  CFFLLSCASHPPRSQFDPLAPLPIHPSSPVAQSGRRRPDSRGFGRGLAP-----PGAGNP 228
           CF  LSC  H    + DP  P P  P       GR  P   G G G  P     PG G P
Sbjct: 16  CF--LSCECHRGPRRHDPRGPFPPPPPPHGPGIGRPHPPPFGPGIGRPPPPPFGPGIGRP 73

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>CAP2_DICDI (P34122) CABP1-related protein p31/p34|
          Length = 287

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 25/96 (26%), Positives = 36/96 (37%), Gaps = 1/96 (1%)
 Frame = +1

Query: 4   SNP-PSPNQIKPKESPNRKACCFFLLSCASHPPRSQFDPLAPLPIHPSSPVAQSGRRRPD 180
           SNP P  NQ  P    N +A            PR  F P AP P  P+   +     +  
Sbjct: 27  SNPNPQANQFLPPPPSNTQA------------PRPGFPPSAPPPSAPAGQYSMPPPPQQQ 74

Query: 181 SRGFGRGLAPPGAGNPRSTAAATMFWRMTGLSAASP 288
            +    G+ PP +G+   T  + +  +   LS   P
Sbjct: 75  QQAGQYGMPPPPSGSGIGTGVSLVKDQQISLSKEDP 110

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>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor|
          Length = 1745

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -3

Query: 233  DLGFPAPGGASPRPN-PRESGRRRPDWATGEEGWIG-RGASG 114
            D+G P P GAS  P  P   G+R P    G EG  G +GA G
Sbjct: 1290 DVGGPGPPGASGEPGAPGPPGKRGPSGHMGREGREGEKGAKG 1331

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>PACC_ASPGI (Q5XL24) pH-response transcription factor pacC/RIM101|
          Length = 678

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 8/102 (7%)
 Frame = +1

Query: 19  PNQIKPKESPNRKACCFFLLSCASHPPRSQFDPLAPLPIHPSSPVAQSGRRRPDSRGFGR 198
           P+Q+ P  +    +    +   A+H P +    L P    PSS  + +  R P S     
Sbjct: 393 PSQLPPSHATATTSAATMMSHPATHSPSTGTPALTP----PSSAQSYTSGRSPISMSSAH 448

Query: 199 GLAPP----GAGNPRSTAAATMFWRMTG----LSAASPVDTI 300
            ++PP    G+G      +ATM   MT      S+A+P  T+
Sbjct: 449 RVSPPHHDGGSGMYPRLPSATMADSMTAGYPTTSSAAPPSTL 490

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>MP83_MYCTU (P0A670) Cell surface lipoprotein MPT83 precursor (Lipoprotein p23)|
          Length = 220

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
 Frame = +1

Query: 25  QIKPKESPNRKACCF-FLLSCASHPPRSQFDPLAPLPI-HPSSPVAQSGRRRPDSRGFGR 198
           Q KP  + +  A    FL  C+S  P SQ    +P P   P++PV  +    P +   GR
Sbjct: 5   QAKPAAAASLAAIAIAFLAGCSSTKPVSQ--DTSPKPATSPAAPVTTAAMADPAADLIGR 62

Query: 199 GLAPPGAGNP 228
           G A   A NP
Sbjct: 63  GCAQYAAQNP 72

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>MP83_MYCBO (P0A671) Cell surface lipoprotein MPB83 precursor (Lipoprotein p23)|
          Length = 220

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
 Frame = +1

Query: 25  QIKPKESPNRKACCF-FLLSCASHPPRSQFDPLAPLPI-HPSSPVAQSGRRRPDSRGFGR 198
           Q KP  + +  A    FL  C+S  P SQ    +P P   P++PV  +    P +   GR
Sbjct: 5   QAKPAAAASLAAIAIAFLAGCSSTKPVSQ--DTSPKPATSPAAPVTTAAMADPAADLIGR 62

Query: 199 GLAPPGAGNP 228
           G A   A NP
Sbjct: 63  GCAQYAAQNP 72

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>ARTE_ARATH (Q9FYL3) Protein ARTEMIS, chloroplast precursor (Arabidopsis|
           thaliana envelope membrane integrase) (Ath4)
           (ALBINO3-like protein 1)
          Length = 1013

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
 Frame = -3

Query: 227 GFPAPGGASPRPNPRESGRRRPDWATGEEGWIGRGASGSNWDRGG*EAHERRKKQHAFLF 48
           G P+PGG S  P     G   P    G  G   +G  G    + G    E+     A   
Sbjct: 404 GSPSPGGGSGSPPSTGGGSGSPPSTGGGGGSPSKGGGGG---KSGKSGEEKSSSNLALPL 460

Query: 47  GLSL-GLIWFGDGG 9
           G+SL  L+  G GG
Sbjct: 461 GISLPTLLSLGAGG 474

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>WIRE_HUMAN (Q8TF74) WIP-related protein (WASP-interacting protein-related|
           protein) (WIP-and CR16-homologous protein)
          Length = 440

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 26/76 (34%), Positives = 32/76 (42%), Gaps = 8/76 (10%)
 Frame = +1

Query: 10  PPSPNQIKPKESPNRKACCFFLLSCASHPPRSQFDPLAPLPIHPSSPVAQSGRRRPD--- 180
           PP+P  +KP  SP          S A  PP  +  P   +P  PSSP  +S    P    
Sbjct: 224 PPAPPPVKPPPSPVNIRTGPSGQSLAPPPPPYRQPP--GVPNGPSSPTNESAPELPQRHN 281

Query: 181 -----SRGFGRGLAPP 213
                + G  RGLAPP
Sbjct: 282 SLHRKTPGPVRGLAPP 297

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>HTPX_RHILO (Q98ET0) Probable protease htpX homolog (EC 3.4.24.-)|
          Length = 336

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = -3

Query: 254 NMVAAAVDLGFPAPGG--ASPRPNPRESGRRRPDWATGE 144
           N +AA  ++     GG  A+PRP PR++G ++P    G+
Sbjct: 268 NRIAALQEMAQQMAGGTQAAPRPTPRQAGEQQPSGPWGQ 306

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>GRLF1_HUMAN (Q9NRY4) Glucocorticoid receptor DNA-binding factor 1 (Glucocorticoid|
            receptor repression factor 1) (GRF-1) (Rho GAP p190A)
            (p190-A)
          Length = 1513

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +1

Query: 97   PRSQFDPLAPLPIHPSSPVAQSGRRRP 177
            P+S   PL P P+HP  P  Q  R  P
Sbjct: 1481 PQSPMQPLLPSPLHPHRPTPQPSRNIP 1507

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>NPAS3_MOUSE (Q9QZQ0) Neuronal PAS domain protein 3 (Neuronal PAS3) (Member of|
           PAS protein 6) (MOP6)
          Length = 925

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 100 RSQFDPLAPLPIHP-SSPVAQSGRRRPDSRGFGRGLAPPGAGN 225
           ++QF   AP+P  P S P++ S R +    G G G   PGA N
Sbjct: 732 KTQFSGTAPVPSDPLSPPLSASPRDKHPGGGAGSGGGGPGASN 774

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>MDC1_PIG (Q767L8) Mediator of DNA damage checkpoint protein 1|
          Length = 2042

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = +1

Query: 7    NPPSPN-QIKPKESPNRKACCFFLLSCASHPPRSQFDPLAPLPI--HPSSPVAQSGRRRP 177
            +PP+P  +++P+ SP                      PL+P+P+  HP+SP  Q+G   P
Sbjct: 1093 DPPNPEPKVRPQGSP----------------------PLSPIPLEAHPTSPTDQAGSPEP 1130

Query: 178  DSR 186
             SR
Sbjct: 1131 TSR 1133

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>COBA1_RAT (P20909) Collagen alpha-1(XI) chain precursor (Fragment)|
          Length = 482

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = -3

Query: 227 GFPAPGGASPRPNPRESGRRRPDWATGEEGWIGRGASGSNWDRG 96
           G P P G +  P P   G+R P  A+G EG  G+G  G+  + G
Sbjct: 21  GPPGPSGEAGPPGP--PGKRGPPGASGSEG--GQGEKGAKGEAG 60

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>AREA_EMENI (P17429) Nitrogen regulatory protein areA|
          Length = 876

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +1

Query: 106 QFDPLAPLPIHP-SSPVAQSGRRRPDSRGFGRGLAPPGAGNPRSTAAAT 249
           Q  P AP      S+  ++S    P S G G G+ P  A  P+S++AAT
Sbjct: 747 QVTPTAPTSSRAQSNTTSESPPAMPGSSGRGSGVVPIAAAPPKSSSAAT 795

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>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)|
            (LC collagen)
          Length = 2944

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = -3

Query: 227  GFPA-PGGASPRPNPRESGRRRPDWATGEEGWIGRGASGSNWDR 99
            GFP  PGG  P+ +  E+G +      GE G  G   S  N DR
Sbjct: 1901 GFPGVPGGTGPKGDRGETGSKGEQGLPGERGLRGEPGSVPNVDR 1944

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>ACHA4_HUMAN (P43681) Neuronal acetylcholine receptor protein, alpha-4 subunit|
           precursor
          Length = 627

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 26/84 (30%), Positives = 31/84 (36%)
 Frame = +1

Query: 1   SSNPPSPNQIKPKESPNRKACCFFLLSCASHPPRSQFDPLAPLPIHPSSPVAQSGRRRPD 180
           S +PPSP+   P + P          SC S  P  Q  P  PL    +SP    G  RP 
Sbjct: 400 SLHPPSPSFCVPLDVPAEPGP-----SCKS--PSDQLPPQQPLEAEKASPHPSPGPCRPP 452

Query: 181 SRGFGRGLAPPGAGNPRSTAAATM 252
                 G   PG    RS +   M
Sbjct: 453 -----HGTQAPGLAKARSLSVQHM 471

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>TESK1_RAT (Q63572) Dual specificity testis-specific protein kinase 1 (EC|
           2.7.12.1) (Testicular protein kinase 1)
          Length = 628

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 29/91 (31%), Positives = 35/91 (38%)
 Frame = +1

Query: 16  SPNQIKPKESPNRKACCFFLLSCASHPPRSQFDPLAPLPIHPSSPVAQSGRRRPDSRGFG 195
           SP  +   E+P R+  C  L S    P R +      LP    SPV  S   R D  G  
Sbjct: 423 SPESLVQPETPVRR--CRSLPSSPELPRRME----TALPGPGPSPVGPSTEERMDCEGSS 476

Query: 196 RGLAPPGAGNPRSTAAATMFWRMTGLSAASP 288
               PPG       A AT  +  T  SA+ P
Sbjct: 477 PEPEPPGPAPQLPLAVATDNFISTCSSASQP 507

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>MEF2D_XENLA (Q03413) Myocyte-specific enhancer factor 2D homolog (Serum|
           response factor-like protein 1) (SL-1)
          Length = 498

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 19/63 (30%), Positives = 30/63 (47%)
 Frame = +1

Query: 1   SSNPPSPNQIKPKESPNRKACCFFLLSCASHPPRSQFDPLAPLPIHPSSPVAQSGRRRPD 180
           ++NP + +  +   SPNR+      LSC SH  R +    +P+    S+  +  G  R D
Sbjct: 404 NTNPINISIKREPASPNRERSTGTPLSCFSHQSRHEATGRSPVDSLSSNASSFEGNDRED 463

Query: 181 SRG 189
            RG
Sbjct: 464 PRG 466

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>CU086_HUMAN (P59089) Protein C21orf86|
          Length = 165

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 24/82 (29%), Positives = 31/82 (37%), Gaps = 11/82 (13%)
 Frame = +1

Query: 22  NQIKPKESPNRKACCFFLLSCASHPP------RSQFDPLAPLPI----HPSSPVAQSGRR 171
           N  +  E   R   CF  L C +  P      R    P  P  +     PS P  + G R
Sbjct: 80  NDFRATECTGRPRLCFHSLRCGAFSPGAPCWGRFNRRPCLPPTVLRKDRPSLPQERPGWR 139

Query: 172 RPDSRGFGR-GLAPPGAGNPRS 234
            P   G     L+PPG  +P+S
Sbjct: 140 SPGVGGSSELALSPPGLVSPQS 161

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>ZN759_MOUSE (Q80VM4) Zinc finger protein 579|
          Length = 562

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
 Frame = +1

Query: 112 DPLAPLPIHPSSPVAQSGRRRPD--SRGFGRGLAPPGAGNPRS 234
           DP  P P   S P    GR R     RG GRG    GAG PR+
Sbjct: 2   DPQPPPPAQGSPPHRDRGRGRGRGRGRGRGRGRGRGGAGAPRA 44

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>RORA_MOUSE (P51448) Nuclear receptor ROR-alpha (Nuclear receptor RZR-alpha)|
          Length = 523

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 19/63 (30%), Positives = 29/63 (46%)
 Frame = +1

Query: 112 DPLAPLPIHPSSPVAQSGRRRPDSRGFGRGLAPPGAGNPRSTAAATMFWRMTGLSAASPV 291
           DP A  P    S  A   R  P ++  GR    PGAG  +S A+++    +T  +  S +
Sbjct: 9   DPAASEPGSSGSEAAAGSRETPLTQDTGRKSEAPGAGRRQSYASSSRGISVTKKTHTSQI 68

Query: 292 DTI 300
           + I
Sbjct: 69  EII 71

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>PRP45_USTMA (Q4PB95) Pre-mRNA-splicing factor PRP45 (Pre-mRNA-processing|
           protein 45)
          Length = 638

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 19/75 (25%), Positives = 33/75 (44%)
 Frame = +1

Query: 94  PPRSQFDPLAPLPIHPSSPVAQSGRRRPDSRGFGRGLAPPGAGNPRSTAAATMFWRMTGL 273
           PPR +F   A  P  P  PV +S  R+  ++     + PP   N ++    T+       
Sbjct: 244 PPRHRFKKTAAGPPSPPPPVLRSPPRKVTAQEQKDWMIPPAVSNWKNNKGYTIPLDKRLA 303

Query: 274 SAASPVDTILDKENF 318
           + AS +  ++  +NF
Sbjct: 304 ADASGIQDVVINDNF 318

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>ZN297_HUMAN (O15209) Zinc finger protein 297 (BING1 protein) (Zinc finger and|
           BTB domain-containing protein 22A)
          Length = 634

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 27/87 (31%), Positives = 35/87 (40%), Gaps = 8/87 (9%)
 Frame = +1

Query: 1   SSNPPSPNQIKPKESPNRKACC--FFLLSCASHPPRSQFDPLAPLPIHPSSPVAQSGR-- 168
           + +P S N   P+ES +  +     F  S      R    P+ P P+  S   A SG+  
Sbjct: 200 NQSPSSSNYFSPRESTDFSSSSQEAFAASAVGSGERRGGGPVFPAPVVGSGG-ATSGKLL 258

Query: 169 ----RRPDSRGFGRGLAPPGAGNPRST 237
                  D  G GRG   PGAG  R T
Sbjct: 259 LEADELCDDGGDGRGAVVPGAGLRRPT 285

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>AGRN_HUMAN (O00468) Agrin precursor|
          Length = 2045

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
 Frame = +1

Query: 85   ASHPPRSQFDPLAPLPIHPSSPVAQS----GRRRPDSRGFGR--GLAPPGAGNP 228
            AS  P S   P AP P H S PVA++      RRP +    R  G  PP    P
Sbjct: 1276 ASRLPSSAVTPRAPHPSHTSQPVAKTTAAPTTRRPPTTAPSRVPGRRPPAPQQP 1329

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>MAST3_HUMAN (O60307) Microtubule-associated serine/threonine-protein kinase 3 (EC|
            2.7.11.1)
          Length = 1309

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 29/95 (30%), Positives = 33/95 (34%), Gaps = 3/95 (3%)
 Frame = +1

Query: 1    SSNPPSPNQIKPKESPNRKACCFFLLSCASHPPRSQFDPLAPLPIHPSSPVAQSGRRR-- 174
            SS PPSP    P  +P               PPRS     +PLP HP +P      RR  
Sbjct: 1182 SSIPPSPLACPPISAP---------------PPRSP----SPLPGHPPAPARSPRLRRGQ 1222

Query: 175  -PDSRGFGRGLAPPGAGNPRSTAAATMFWRMTGLS 276
              D  G G  L        R   A  +  R   LS
Sbjct: 1223 SADKLGTGERLDGEAGRRTRGPEAELVVMRRLHLS 1257

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>ZYG1_CAEEL (Q9GT24) Probable serine/threonine-protein kinase zyg-1 (EC|
           2.7.11.1) (Zygote defective protein 1)
          Length = 706

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
 Frame = +1

Query: 73  LLSCASHPPRSQFDPLAPLPIHPSSPVA-----QSGRRRPDSRGFGRGLAPP 213
           L+  +S P  S   PL+  PIH   P        S R R   R  GRG  PP
Sbjct: 291 LIRSSSQPAHSGRAPLSNRPIHDRMPSTSSRGFDSERGRERDRDSGRGTVPP 342

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>PKD2_HUMAN (Q13563) Polycystin-2 (Autosomal dominant polycystic kidney disease|
            type II protein) (Polycystwin) (R48321)
          Length = 968

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = -3

Query: 245  AAAVDLGFPAPGGASPRPNPRESGRRRPDWATGEEGWIGRGASGSN 108
            A+ +  G   P G + +P PR S   RP  +   EG  G G +GS+
Sbjct: 922  ASQISHGLGTPVGLNGQPRPRSS---RPSSSQSTEGMEGAGGNGSS 964

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>ADA2A_PIG (P18871) Alpha-2A adrenergic receptor (Alpha-2A adrenoceptor)|
           (Alpha-2A adrenoreceptor) (Alpha-2AAR)
          Length = 450

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
 Frame = -3

Query: 215 PGGASPRPNPRESGRRRPDWATGEEGWIGRGASGSNWDRGG*EAHERRKKQHAFLFGLSL 36
           PG + PR  P   G   P    GEE   G  A  S W        + R+K+  F+  + +
Sbjct: 328 PGDSLPRRGPGAPGPGAPATGAGEER--GGVAKASRW-----RGRQNREKRFTFVLAVVI 380

Query: 35  GLI---WF 21
           G+    WF
Sbjct: 381 GVFVVCWF 388

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>RP54_XANCV (P77998) RNA polymerase sigma-54 factor|
          Length = 479

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
 Frame = -3

Query: 242 AAVDLGFPAPGGASPRPNPRES---GRRRPDWATGEEGWIGRGASGSNWDRGG*EAHER 75
           AA D+   +   AS     RE      R  DW+  E  W G G+ GS  D    +A ER
Sbjct: 56  AASDIAVDSSPSASTEQPQREEVAPAERDEDWSQDELQWTGSGSGGSFDDDESGDAAER 114

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>HCN4_MOUSE (O70507) Potassium/sodium hyperpolarization-activated cyclic|
            nucleotide-gated channel 4 (Brain cyclic nucleotide gated
            channel 3) (BCNG-3)
          Length = 1186

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
 Frame = +1

Query: 10   PPSPNQIKPKESPNRKACCFFLLSCASHPPRSQFDPLAPLPIHPSSPVAQSGRRRPDSRG 189
            PP P+   P  SP +       LS       S      P P  PS     SG   P +  
Sbjct: 946  PPPPSSRSPSSSPGQLGQPPGELSLGLAAGPSSTPETPPRPERPSFMAGASGGASPVAFT 1005

Query: 190  FGRGLAPPG--AGNPRSTAAA 246
               GL+PPG   G PR+  +A
Sbjct: 1006 PRGGLSPPGHSPGPPRTFPSA 1026

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>US02_EHV1B (P28964) Gene 68 protein|
          Length = 418

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
 Frame = -3

Query: 272 RPVMRQNMVAAAVDLG----FPAPGGASPRPNPRESGRRRPDWA 153
           RP   + ++ A VD       PAPG   PR  P E G  RP+ A
Sbjct: 210 RPPTVKRVIYAVVDPARLREIPAPGRPLPRRRPSEGGDARPEAA 253

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>SIN3B_HUMAN (O75182) Paired amphipathic helix protein Sin3b (Transcriptional|
           corepressor Sin3b) (Histone deacetylase complex subunit
           Sin3b)
          Length = 1162

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 152 TGEEGWIGRGASGSNWDRGG*EAHER 75
           +G  G  GRG SG+ W R G   HE+
Sbjct: 11  SGAGGPAGRGLSGARWGRSGSAGHEK 36

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>RL1_HHV2H (P28283) Neurovirulence factor RL1 (Neurovirulence factor ICP34.5)|
          Length = 261

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +1

Query: 1   SSNPPSPNQIKPKESPNRKACCFFLLSCASHPPRSQFDPLAPLPIH 138
           +++PPS    K  E+P+         +C   PPR +  P  PLP H
Sbjct: 90  ANSPPSEGGGKAPEAPHAAPAA----ACPPPPPRKERGPQRPLPPH 131

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>CJ078_MOUSE (Q8BP27) Protein C10orf78 homolog|
          Length = 319

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 24/86 (27%), Positives = 31/86 (36%), Gaps = 9/86 (10%)
 Frame = +1

Query: 1   SSNPPSPNQI----KPKESPNRKACCFFLLSCASHPPRSQFDPLAPLPIH-----PSSPV 153
           S NPPSP       + +E+P              +PP     P AP P       P+SP 
Sbjct: 46  SENPPSPPTSPAVPQTRENPPSPPTSPAAPQPRENPPSPPTSPAAPQPRENPPSPPTSPA 105

Query: 154 AQSGRRRPDSRGFGRGLAPPGAGNPR 231
           A   R  P S         P +G P+
Sbjct: 106 APQPRENPPSPHSNSSGKQPLSGTPK 131

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>YAU8_SCHPO (Q10163) Hypothetical protein C26A3.08 in chromosome I|
          Length = 147

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +1

Query: 97  PRSQFDPLAPLPIHPSSPVAQSGRRRPDS-RGFGRGLAPPG 216
           P  +  PL   P+  + PV   G   P    GFGRG  PPG
Sbjct: 103 PAGRGIPLGQAPVGLAGPVRGVGYTAPPPPAGFGRGAPPPG 143

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>DIDO1_MOUSE (Q8C9B9) Death-inducer obliterator 1 (DIO-1) (Death-associated|
            transcription factor 1) (DATF-1) (Fragments)
          Length = 1956

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 20/51 (39%), Positives = 24/51 (47%)
 Frame = +1

Query: 94   PPRSQFDPLAPLPIHPSSPVAQSGRRRPDSRGFGRGLAPPGAGNPRSTAAA 246
            PP ++F    P PI    P   SG+  P   G  RGL+P   G PR  A A
Sbjct: 1508 PPPARFGAQKP-PI----PSLFSGQHGPPPYGDNRGLSPSYLGGPRGGAPA 1553

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>TOP3B_HUMAN (O95985) DNA topoisomerase 3-beta-1 (EC 5.99.1.2) (DNA|
           topoisomerase III beta-1)
          Length = 862

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +1

Query: 148 PVAQSGRRRPDSRGFGRGLAPPGAGNPR 231
           P+ + G  R   RG GR   PPG  NPR
Sbjct: 821 PMHRGGPGRRQGRGRGRARRPPGKPNPR 848

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>SOX12_MOUSE (Q04890) SOX-12 protein|
          Length = 314

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 22/67 (32%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
 Frame = -3

Query: 266 VMRQNMVAAAVDLGFPAPGGASPRPNPRESGRRRPDWATGEEGWIGRGASG-SNWDRGG* 90
           +++Q    A  D G P PG     P P   G R P W     G I R  +    W +   
Sbjct: 1   MVQQRGARAKRDGGPPPPG-----PGPAAEGAREPGWCKTPSGHIKRPMNAFMVWSQ--- 52

Query: 89  EAHERRK 69
             HERRK
Sbjct: 53  --HERRK 57

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>MAGI2_MOUSE (Q9WVQ1) Membrane-associated guanylate kinase, WW and PDZ|
            domain-containing protein 2 (Membrane-associated
            guanylate kinase inverted 2) (MAGI-2)
            (Atrophin-1-interacting protein 1) (Activin
            receptor-interacting protein 1) (Acvrip1)
          Length = 1275

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = +1

Query: 7    NPPSPNQIKPKESPNRKACCFFLLSCASHPPRSQFDPLA-PLPIHPSSPVAQSGRRRP 177
            N P+      K+SP  +           H P +Q  PLA P P  P+SPVAQ    +P
Sbjct: 1012 NSPTSAPSSEKQSPMAQ----------QHSPLAQQSPLAQPSPATPNSPVAQPAPPQP 1059

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>KIP1_YEAST (P28742) Kinesin-like protein KIP1 (Chromosome instability protein 9)|
          Length = 1111

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 13/69 (18%)
 Frame = +1

Query: 31   KPKESPNRKACCFFLLSCASHPPRSQFDPLAPLPIHPSSPV-----------AQSGRRR- 174
            K K+  +    C   LS   + P SQF P  P+P+ P  P+           A+S R + 
Sbjct: 1010 KSKDDTSNSRTCIPNLSTNENFPLSQFSPKTPVPV-PDQPLPKVLIPKSINSAKSNRSKT 1068

Query: 175  -PDSRGFGR 198
             P++ G GR
Sbjct: 1069 LPNTEGTGR 1077

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>COJA1_HUMAN (Q14993) Collagen alpha-1(XIX) chain precursor (Collagen alpha-1(Y)|
            chain)
          Length = 1142

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
 Frame = -3

Query: 233  DLGFPAPGGASPRPNPRESGRRRPDWATGEEGWIG----RGASGSNWDRG 96
            D+GFP P G S +P     G    D   G +G +G    RG  G   D+G
Sbjct: 912  DIGFPGPEGPSGKP-----GINGKDGIPGAQGIMGKPGDRGPKGERGDQG 956

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>IF2_PSEU2 (Q4ZNR2) Translation initiation factor IF-2|
          Length = 841

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = -3

Query: 281 AAERPVMRQNMVAAAVDLGFPAPGGASPRPNPRE-SGRRRPDWATGEEGWIGRGASGSNW 105
           AA  PV     V  A     PAP  A+P  + R+   +RRPD    ++    R A G + 
Sbjct: 146 AAAEPVAAAEPVREAAPAAAPAPASAAPSADARKRDEQRRPDKPRADD----RNARGGDG 201

Query: 104 DR 99
           +R
Sbjct: 202 ER 203

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>MCHR1_MACMU (Q8MJ89) Melanin-concentrating hormone receptor 1 (MCH receptor 1)|
           (MCHR-1) (MCH-R1) (MCH1R) (MCH-1R) (MCHR) (G-protein
           coupled receptor 24) (Fragment)
          Length = 388

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 4/32 (12%)
 Frame = -3

Query: 188 PRESGRR----RPDWATGEEGWIGRGASGSNW 105
           P + GRR    +P W  G   W+   A+G+ W
Sbjct: 4   PGQGGRRWRLPQPAWVEGSSAWLWEPATGTGW 35

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>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = -3

Query: 230 LGFPAPGGASPRP-NPRESGRRRPDWATGEEGWIGR-GASG 114
           +GFP P GA+  P  P E G   P  A G  G  G  GA G
Sbjct: 569 MGFPGPKGAAGEPGKPGERGAPGPPGAVGAAGKDGEAGAQG 609

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>ACHA4_PANTR (Q5IS77) Neuronal acetylcholine receptor protein, alpha-4 subunit|
           precursor
          Length = 627

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 26/84 (30%), Positives = 31/84 (36%)
 Frame = +1

Query: 1   SSNPPSPNQIKPKESPNRKACCFFLLSCASHPPRSQFDPLAPLPIHPSSPVAQSGRRRPD 180
           S +PPSP+   P + P          SC S  P  Q     PL    +SP A  G  RP 
Sbjct: 400 SLHPPSPSFCIPLDVPAEPGP-----SCKS--PSDQLPAQQPLEAEKASPHASPGPCRPP 452

Query: 181 SRGFGRGLAPPGAGNPRSTAAATM 252
                 G   PG    RS +   M
Sbjct: 453 -----HGTQAPGLAKARSLSVQHM 471

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>CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Contains:|
           Chondrocalcin]
          Length = 1418

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 11/57 (19%)
 Frame = -3

Query: 233 DLGFPAPGGASPRPNPR----------ESGRRRPDWATGEEGWIGR-GASGSNWDRG 96
           D G P P G S  P P+            G + P  ATG  G  GR G  GSN + G
Sbjct: 790 DAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPG 846

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>9KD_HUMAN (P13994) 9 kDa protein|
          Length = 82

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 5/84 (5%)
 Frame = +1

Query: 10  PPSPNQIKPKESPNRKACCFFLLSCAS----HPPRSQFDPLAPLPIH-PSSPVAQSGRRR 174
           PPSP       SP   +C FFLL   S       R++  P  PL    P   +AQ G+ +
Sbjct: 3   PPSP-------SPTHLSCIFFLLITVSPLEASSTRARVFPCLPLYAECPEQSLAQ-GKEK 54

Query: 175 PDSRGFGRGLAPPGAGNPRSTAAA 246
               G G      G G P   A A
Sbjct: 55  SHPGGGGERPGLAGQGEPDHPAGA 78

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>PHC1_MOUSE (Q64028) Polyhomeotic-like protein 1 (mPH1) (Early development|
           regulatory protein 1) (RAE-28)
          Length = 1012

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = +1

Query: 16  SPNQIKPKESPNRKACCFFLLSCASHPPRSQFDPLAPLPIHPSSPVAQSGRRRPDSR 186
           SP  I+ K S   KA    + S  ++PP S    LAP P  P   +A   R+  DS+
Sbjct: 677 SPKVIEEKNSLGEKAEP--VASLNANPPNSDLVALAPTPSAPPPTLALVSRQMGDSK 731

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>NU155_HUMAN (O75694) Nuclear pore complex protein Nup155 (Nucleoporin Nup155)|
           (155 kDa nucleoporin)
          Length = 1391

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
 Frame = +1

Query: 94  PPRSQFDPLAPLPIHPSSPVAQSGRRRPDSRGFG---RGLAPPGAGNP 228
           PP S   P+   P++ SSPV  SG   P+    G    G+ PP    P
Sbjct: 589 PPPSNVGPILGSPVYSSSPV-PSGSPYPNPSFLGTPSHGIQPPAMSTP 635

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>CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contains:|
           Chondrocalcin]
          Length = 1419

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 11/57 (19%)
 Frame = -3

Query: 233 DLGFPAPGGASPRPNPR----------ESGRRRPDWATGEEGWIGR-GASGSNWDRG 96
           D G P P G S  P P+            G + P  ATG  G  GR G  GSN + G
Sbjct: 791 DAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPG 847

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>MYSC_ACACA (P10569) Myosin IC heavy chain|
          Length = 1168

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
 Frame = -3

Query: 227  GFPAPGGASPRPNPRESGRRRPDWATGEEGWIGRGAS---GSNWDRGG 93
            G PAPGGA+PR      GR  P    G     GRG +   G    RGG
Sbjct: 1099 GMPAPGGAAPR------GRGAPPPGAGGPPGGGRGGAPPPGGMRGRGG 1140


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,622,543
Number of Sequences: 219361
Number of extensions: 1217033
Number of successful extensions: 4946
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 4472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4929
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result