>dbj|AK072561.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133P17, full
           insert sequence
          Length = 3521

 Score =  172 bits (87), Expect = 7e-40
 Identities = 144/163 (88%)
 Strand = Plus / Plus

                                                                       
Query: 301 cggtggatcttatcgcgtcctgccaagactccatccgccagattggagatgagattgcag 360
           |||||||||| |||||  ||||||  ||||||||||||||||||||||||||||||||||
Sbjct: 222 cggtggatctgatcgccgcctgcctcgactccatccgccagattggagatgagattgcag 281

                                                                       
Query: 361 atgcactagtgtacctagatgcaggcactctggaggcgttccactttataggagcattcc 420
           |||||||||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||
Sbjct: 282 atgcactagtgtaccttgatgcaggcactctggaggcgtttcagtttattggagctttcc 341

                                                      
Query: 421 ctctgctccctgagcttagcgctcgtgcggtgtgcagcttgga 463
           |  |||| | ||||||| | ||||||||  | |||||||||||
Sbjct: 342 ccttgcttcttgagcttggtgctcgtgcaatttgcagcttgga 384



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 80  gcatctccggcgagctgcagcgccgaa 106
           ||||||||||||||| |||||||||||
Sbjct: 57  gcatctccggcgagcggcagcgccgaa 83

>gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBa0011J22 map R10571S, complete sequence
          Length = 154441

 Score =  137 bits (69), Expect = 4e-29
 Identities = 111/125 (88%)
 Strand = Plus / Minus

                                                                        
Query: 339  cagattggagatgagattgcagatgcactagtgtacctagatgcaggcactctggaggcg 398
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1378 cagattggagatgagattgcagatgcactagtgtaccttgatgcaggcactctggaggcg 1319

                                                                        
Query: 399  ttccactttataggagcattccctctgctccctgagcttagcgctcgtgcggtgtgcagc 458
            || || ||||| ||||| |||||  |||| | ||||||| | ||||||||  | ||||||
Sbjct: 1318 tttcagtttattggagctttccccttgcttcttgagcttggtgctcgtgcaatttgcagc 1259

                 
Query: 459  ttgga 463
            |||||
Sbjct: 1258 ttgga 1254



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 80   gcatctccggcgagctgcagcgccgaa 106
            ||||||||||||||| |||||||||||
Sbjct: 2083 gcatctccggcgagcggcagcgccgaa 2057



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 301  cggtggatcttatcgcgtcctgccaagactccatccgccag 341
            |||||||||| |||||  ||||||  |||||||||||||||
Sbjct: 1918 cggtggatctgatcgccgcctgcctcgactccatccgccag 1878

>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0073K23
              map near R10571S, complete sequence
          Length = 161073

 Score =  137 bits (69), Expect = 4e-29
 Identities = 111/125 (88%)
 Strand = Plus / Minus

                                                                          
Query: 339    cagattggagatgagattgcagatgcactagtgtacctagatgcaggcactctggaggcg 398
              |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 100687 cagattggagatgagattgcagatgcactagtgtaccttgatgcaggcactctggaggcg 100628

                                                                          
Query: 399    ttccactttataggagcattccctctgctccctgagcttagcgctcgtgcggtgtgcagc 458
              || || ||||| ||||| |||||  |||| | ||||||| | ||||||||  | ||||||
Sbjct: 100627 tttcagtttattggagctttccccttgcttcttgagcttggtgctcgtgcaatttgcagc 100568

                   
Query: 459    ttgga 463
              |||||
Sbjct: 100567 ttgga 100563



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 80     gcatctccggcgagctgcagcgccgaa 106
              ||||||||||||||| |||||||||||
Sbjct: 101392 gcatctccggcgagcggcagcgccgaa 101366



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 301    cggtggatcttatcgcgtcctgccaagactccatccgccag 341
              |||||||||| |||||  ||||||  |||||||||||||||
Sbjct: 101227 cggtggatctgatcgccgcctgcctcgactccatccgccag 101187

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  137 bits (69), Expect = 4e-29
 Identities = 111/125 (88%)
 Strand = Plus / Plus

                                                                           
Query: 339     cagattggagatgagattgcagatgcactagtgtacctagatgcaggcactctggaggcg 398
               |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 3313607 cagattggagatgagattgcagatgcactagtgtaccttgatgcaggcactctggaggcg 3313666

                                                                           
Query: 399     ttccactttataggagcattccctctgctccctgagcttagcgctcgtgcggtgtgcagc 458
               || || ||||| ||||| |||||  |||| | ||||||| | ||||||||  | ||||||
Sbjct: 3313667 tttcagtttattggagctttccccttgcttcttgagcttggtgctcgtgcaatttgcagc 3313726

                    
Query: 459     ttgga 463
               |||||
Sbjct: 3313727 ttgga 3313731



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 80      gcatctccggcgagctgcagcgccgaa 106
               ||||||||||||||| |||||||||||
Sbjct: 3312902 gcatctccggcgagcggcagcgccgaa 3312928



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                        
Query: 301     cggtggatcttatcgcgtcctgccaagactccatccgccag 341
               |||||||||| |||||  ||||||  |||||||||||||||
Sbjct: 3313067 cggtggatctgatcgccgcctgcctcgactccatccgccag 3313107

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  137 bits (69), Expect = 4e-29
 Identities = 111/125 (88%)
 Strand = Plus / Plus

                                                                           
Query: 339     cagattggagatgagattgcagatgcactagtgtacctagatgcaggcactctggaggcg 398
               |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 3322312 cagattggagatgagattgcagatgcactagtgtaccttgatgcaggcactctggaggcg 3322371

                                                                           
Query: 399     ttccactttataggagcattccctctgctccctgagcttagcgctcgtgcggtgtgcagc 458
               || || ||||| ||||| |||||  |||| | ||||||| | ||||||||  | ||||||
Sbjct: 3322372 tttcagtttattggagctttccccttgcttcttgagcttggtgctcgtgcaatttgcagc 3322431

                    
Query: 459     ttgga 463
               |||||
Sbjct: 3322432 ttgga 3322436



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 80      gcatctccggcgagctgcagcgccgaa 106
               ||||||||||||||| |||||||||||
Sbjct: 3321607 gcatctccggcgagcggcagcgccgaa 3321633



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                        
Query: 301     cggtggatcttatcgcgtcctgccaagactccatccgccag 341
               |||||||||| |||||  ||||||  |||||||||||||||
Sbjct: 3321772 cggtggatctgatcgccgcctgcctcgactccatccgccag 3321812

>emb|AJ250923.1|HVO250923 Haloferax volcanii aceB gene for malate synthase
          Length = 1302

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 137 cttcggcgggagcggcgaggt 157
           |||||||||||||||||||||
Sbjct: 825 cttcggcgggagcggcgaggt 805

>gb|AF386507.1|AF386507 Streptomyces lavendulae complestatin biosynthetic gene cluster,
            complete sequence
          Length = 55972

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 141  ggcgggagcggcgaggtctccgtgt 165
            ||||||||||| |||||||||||||
Sbjct: 8800 ggcgggagcggggaggtctccgtgt 8776

>gb|AC160118.2| Mus musculus BAC clone RP23-440L7 from chromosome 9, complete sequence
          Length = 198672

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    cacctctccctcgcctcccc 135
              ||||||||||||||||||||
Sbjct: 183765 cacctctccctcgcctcccc 183746

>emb|AJ842444.1| Vibrio hepatarius partial partial recA pseudogene, strain LMG
           20362T
          Length = 1157

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 350 tgagattgcagatgcactag 369
           ||||||||||||||||||||
Sbjct: 708 tgagattgcagatgcactag 727

>emb|AJ842423.1| Vibrio fortis partial recA gene, strain R-15037
          Length = 797

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 350 tgagattgcagatgcactag 369
           ||||||||||||||||||||
Sbjct: 307 tgagattgcagatgcactag 326

>gb|AC012097.8| Drosophila melanogaster, chromosome X, region 16F-16F, BAC clone
             BACR29H04, complete sequence
          Length = 155670

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   aggcggcgtcgcggggaagg 256
             ||||||||||||||||||||
Sbjct: 24550 aggcggcgtcgcggggaagg 24531

>gb|AC012163.13|AC012163 Drosophila melanogaster, chromosome X, region 16F-16F, BAC clone
             BACR17D02, complete sequence
          Length = 186748

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   aggcggcgtcgcggggaagg 256
             ||||||||||||||||||||
Sbjct: 88064 aggcggcgtcgcggggaagg 88083

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 115      ccacctctccctcgcctccc 134
                ||||||||||||||||||||
Sbjct: 14549841 ccacctctccctcgcctccc 14549860

>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 88      ggcgagctgcagcgccgaag 107
               ||||||||||||||||||||
Sbjct: 2671030 ggcgagctgcagcgccgaag 2671049

>gb|AE003507.3| Drosophila melanogaster chromosome X, section 59 of 74 of the complete
              sequence
          Length = 299804

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 237    aggcggcgtcgcggggaagg 256
              ||||||||||||||||||||
Sbjct: 143237 aggcggcgtcgcggggaagg 143256

>gb|AC154275.2| Mus musculus BAC clone RP24-299G8 from chromosome 16, complete sequence
          Length = 183487

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 415   cattccctctgctccctgag 434
             ||||||||||||||||||||
Sbjct: 79829 cattccctctgctccctgag 79810

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 115      ccacctctccctcgcctccc 134
                ||||||||||||||||||||
Sbjct: 14504125 ccacctctccctcgcctccc 14504144

>emb|AL772414.3|CNS08C9S Oryza sativa chromosome 12, . BAC OSJNBa0040E18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 158261

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 115    ccacctctccctcgcctccc 134
              ||||||||||||||||||||
Sbjct: 111452 ccacctctccctcgcctccc 111433

>gb|AC135358.3| Mus musculus BAC clone RP24-107J13 from 9, complete sequence
          Length = 182075

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 116   cacctctccctcgcctcccc 135
             ||||||||||||||||||||
Sbjct: 18098 cacctctccctcgcctcccc 18079


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,946,616
Number of Sequences: 3902068
Number of extensions: 2946616
Number of successful extensions: 55367
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55182
Number of HSP's gapped (non-prelim): 185
length of query: 465
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 443
effective length of database: 17,147,199,772
effective search space: 7596209498996
effective search space used: 7596209498996
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)