ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl25f06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469640.1| Oryza sativa (japonica cultivar-group), mRNA 252 9e-64
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 252 9e-64
3gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa... 252 9e-64
4gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genom... 252 9e-64
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 252 9e-64
6gb|AY371488.1| Zea mays clone BAC 276N12-123C01, partial sequence 242 8e-61
7gb|AF123535.1| Zea mays alcohol dehydrogenase 1 (adh1) gene, adh... 236 5e-59
8gb|AY691949.1| Zea mays alcohol dehydrogenase 1 (adh1A) gene, co... 236 5e-59
9gb|AF124045.1| Sorghum bicolor BAC clone 110K5, partial sequence 204 2e-49
10gb|DQ215136.1| Taeniopygia guttata clone 0061P0010G05 adenylate ... 42 1.6
11gb|AF357202.1| Streptomyces nodosus amphotericin biosynthetic ge... 42 1.6
12ref|XM_658398.1| Aspergillus nidulans FGSC A4 hypothetical prote... 42 1.6
13ref|XM_750366.1| Aspergillus fumigatus Af293 3-isopropylmalate d... 42 1.6
14emb|AL021497.1|CEY51A2D Caenorhabditis elegans YAC Y51A2D, compl... 42 1.6
15gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 42 1.6
16gb|AE012111.1| Xanthomonas campestris pv. campestris str. ATCC 3... 42 1.6
17gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 42 1.6
18ref|NM_075224.3| Caenorhabditis elegans Y51A2D.7b (Y51A2D.7) mRN... 42 1.6
19gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 42 1.6
20dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
21gb|AC009973.10| Homo sapiens BAC clone RP11-457P23 from 2, compl... 42 1.6
22dbj|AP005308.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
23dbj|AP005575.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
24gb|AY106307.1| Zea mays PCO070813 mRNA sequence 42 1.6
25ref|NM_186997.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.2
26gb|AY657636.1| Synthetic construct Peudomonas aeruginosa clone F... 40 6.2
27gb|AC118640.8| Mus musculus chromosome 15, clone RP24-112A20, co... 40 6.2
28gb|AC159209.2| Mus musculus BAC clone RP23-100C6 from chromosome... 40 6.2
29gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 40 6.2
30emb|CR352287.12| Zebrafish DNA sequence from clone DKEY-158P1 in... 40 6.2
31gb|BC062123.1| Mus musculus chromodomain protein, Y chromosome-l... 40 6.2
32gb|AC141476.3| Mus musculus BAC clone RP24-170D4 from chromosome... 40 6.2
33gb|AC162940.4| Mus musculus BAC clone RP23-95D3 from chromosome ... 40 6.2
34emb|AL158152.18| Human DNA sequence from clone RP11-2B6 on chrom... 40 6.2
35gb|AF451983.1| Homo sapiens hepatoma-derived growth factor 4a (H... 40 6.2
36emb|AL139818.15| Human DNA sequence from clone RP11-311B18 on ch... 40 6.2
37emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete ... 40 6.2
38emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete ... 40 6.2
39emb|AL662807.8| Mouse DNA sequence from clone RP23-138O19 on chr... 40 6.2
40dbj|AK133357.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 6.2
41dbj|AK133257.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 6.2
42dbj|AK156509.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 6.2
43dbj|AK163913.1| Mus musculus 0 day neonate cerebellum cDNA, RIKE... 40 6.2
44emb|BX539345.7| Zebrafish DNA sequence from clone DKEY-120M4 in ... 40 6.2
45dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
46dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
47gb|AC009203.5|AC009203 Drosophila melanogaster, chromosome 2L, r... 40 6.2
48gb|AE004690.1| Pseudomonas aeruginosa PAO1, section 251 of 529 o... 40 6.2
49gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 6.2
50gb|AF180109.1|AF180109 Mus musculus hepatoma-derived growth fact... 40 6.2
51dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 6.2
52dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.2
53dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
54dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
55dbj|AP005746.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
56dbj|AK069376.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
57dbj|AK061037.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
58emb|CR388184.33| Zebrafish DNA sequence from clone CH211-261O3 i... 40 6.2
59gb|AE003660.2| Drosophila melanogaster chromosome 2L, section 69... 40 6.2
60gb|BC108388.1| Mus musculus hepatoma derived growth factor-like ... 40 6.2
61gb|L22864.1|STMWHIB12X Streptomyces aureofaciens whiB operon, co... 40 6.2
62ref|NM_008232.1| Mus musculus hepatoma derived growth factor-lik... 40 6.2
63gb|L11646.1|STMWHIBX Streptomyces aureofaciens transcription-lik... 40 6.2
64dbj|D63663.1| Mus musculus mRNA for hepatoma-derived growth fact... 40 6.2 
>ref|XM_469640.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1013

 Score =  252 bits (127), Expect = 9e-64
 Identities = 169/183 (92%)
 Strand = Plus / Plus

                                                                       
Query: 250 cagaatgctttggagcagttggcgtccattgatctcattgagctgagcaaggaggctaga 309
           |||||||||||||||||| |||| ||||||||||||||||| ||  ||||||||||||||
Sbjct: 348 cagaatgctttggagcagctggcatccattgatctcattgaactatgcaaggaggctaga 407

                                                                       
Query: 310 attgagcactgccgtgcaactagggacttgagtagctgcggccgctatgtgcaacatgtg 369
           |||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 408 attgagcattgccgtgcaactagggacttgagtagctgtggccgctatgtgcagcatgtg 467

                                                                       
Query: 370 ctcaactcatgtgggcatgcctcgttatgtgctgagtgtagccagagatgtgatgtctgc 429
           || |||||||| |||||||| || |||||||||||||| ||||| |||||||||||||||
Sbjct: 468 cttaactcatgcgggcatgcatccttatgtgctgagtgcagccaaagatgtgatgtctgc 527

              
Query: 430 cca 432
           |||
Sbjct: 528 cca 530
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  252 bits (127), Expect = 9e-64
 Identities = 169/183 (92%)
 Strand = Plus / Minus

                                                                            
Query: 250      cagaatgctttggagcagttggcgtccattgatctcattgagctgagcaaggaggctaga 309
                |||||||||||||||||| |||| ||||||||||||||||| ||  ||||||||||||||
Sbjct: 29930120 cagaatgctttggagcagctggcatccattgatctcattgaactatgcaaggaggctaga 29930061

                                                                            
Query: 310      attgagcactgccgtgcaactagggacttgagtagctgcggccgctatgtgcaacatgtg 369
                |||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 29930060 attgagcattgccgtgcaactagggacttgagtagctgtggccgctatgtgcagcatgtg 29930001

                                                                            
Query: 370      ctcaactcatgtgggcatgcctcgttatgtgctgagtgtagccagagatgtgatgtctgc 429
                || |||||||| |||||||| || |||||||||||||| ||||| |||||||||||||||
Sbjct: 29930000 cttaactcatgcgggcatgcatccttatgtgctgagtgcagccaaagatgtgatgtctgc 29929941

                   
Query: 430      cca 432
                |||
Sbjct: 29929940 cca 29929938
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>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete
             sequence
          Length = 159661

 Score =  252 bits (127), Expect = 9e-64
 Identities = 169/183 (92%)
 Strand = Plus / Plus

                                                                         
Query: 250   cagaatgctttggagcagttggcgtccattgatctcattgagctgagcaaggaggctaga 309
             |||||||||||||||||| |||| ||||||||||||||||| ||  ||||||||||||||
Sbjct: 80486 cagaatgctttggagcagctggcatccattgatctcattgaactatgcaaggaggctaga 80545

                                                                         
Query: 310   attgagcactgccgtgcaactagggacttgagtagctgcggccgctatgtgcaacatgtg 369
             |||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 80546 attgagcattgccgtgcaactagggacttgagtagctgtggccgctatgtgcagcatgtg 80605

                                                                         
Query: 370   ctcaactcatgtgggcatgcctcgttatgtgctgagtgtagccagagatgtgatgtctgc 429
             || |||||||| |||||||| || |||||||||||||| ||||| |||||||||||||||
Sbjct: 80606 cttaactcatgcgggcatgcatccttatgtgctgagtgcagccaaagatgtgatgtctgc 80665

                
Query: 430   cca 432
             |||
Sbjct: 80666 cca 80668
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>gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genomic sequence, complete
             sequence
          Length = 139946

 Score =  252 bits (127), Expect = 9e-64
 Identities = 169/183 (92%)
 Strand = Plus / Minus

                                                                         
Query: 250   cagaatgctttggagcagttggcgtccattgatctcattgagctgagcaaggaggctaga 309
             |||||||||||||||||| |||| ||||||||||||||||| ||  ||||||||||||||
Sbjct: 96061 cagaatgctttggagcagctggcatccattgatctcattgaactatgcaaggaggctaga 96002

                                                                         
Query: 310   attgagcactgccgtgcaactagggacttgagtagctgcggccgctatgtgcaacatgtg 369
             |||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 96001 attgagcattgccgtgcaactagggacttgagtagctgtggccgctatgtgcagcatgtg 95942

                                                                         
Query: 370   ctcaactcatgtgggcatgcctcgttatgtgctgagtgtagccagagatgtgatgtctgc 429
             || |||||||| |||||||| || |||||||||||||| ||||| |||||||||||||||
Sbjct: 95941 cttaactcatgcgggcatgcatccttatgtgctgagtgcagccaaagatgtgatgtctgc 95882

                
Query: 430   cca 432
             |||
Sbjct: 95881 cca 95879
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  252 bits (127), Expect = 9e-64
 Identities = 169/183 (92%)
 Strand = Plus / Minus

                                                                            
Query: 250      cagaatgctttggagcagttggcgtccattgatctcattgagctgagcaaggaggctaga 309
                |||||||||||||||||| |||| ||||||||||||||||| ||  ||||||||||||||
Sbjct: 30021542 cagaatgctttggagcagctggcatccattgatctcattgaactatgcaaggaggctaga 30021483

                                                                            
Query: 310      attgagcactgccgtgcaactagggacttgagtagctgcggccgctatgtgcaacatgtg 369
                |||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 30021482 attgagcattgccgtgcaactagggacttgagtagctgtggccgctatgtgcagcatgtg 30021423

                                                                            
Query: 370      ctcaactcatgtgggcatgcctcgttatgtgctgagtgtagccagagatgtgatgtctgc 429
                || |||||||| |||||||| || |||||||||||||| ||||| |||||||||||||||
Sbjct: 30021422 cttaactcatgcgggcatgcatccttatgtgctgagtgcagccaaagatgtgatgtctgc 30021363

                   
Query: 430      cca 432
                |||
Sbjct: 30021362 cca 30021360
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>gb|AY371488.1| Zea mays clone BAC 276N12-123C01, partial sequence
          Length = 213888

 Score =  242 bits (122), Expect = 8e-61
 Identities = 180/198 (90%), Gaps = 1/198 (0%)
 Strand = Plus / Plus

                                                                          
Query: 250    cagaatgctttggagcagttggcgtccattgatctcattgagctgagcaaggaggctaga 309
              ||||||||||||||||||||||| ||||||||||||||||||||  |||||||||| |||
Sbjct: 185164 cagaatgctttggagcagttggcatccattgatctcattgagctatgcaaggaggccaga 185223

                                                                          
Query: 310    attgagcactgccgtgcaactagggacttgagtagctgcggccgctatgtgcaacatgtg 369
              ||||||| ||||||||||||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 185224 attgagcgctgccgtgcaactagagacttgagtagctgtggccgctatgtgcatcatgtg 185283

                                                                          
Query: 370    ctcaactcatgtgggcatgcctcgttatgtgctgagtgtagccagagatgtgatgtctgc 429
              || ||||||||||| |||||||| ||||||||||| || ||||| ||||| || ||||||
Sbjct: 185284 cttaactcatgtggccatgcctcattatgtgctgaatgcagccaaagatgcgacgtctgc 185343

                                
Query: 430    cc-atttgcagaagtcca 446
              || |||||||| ||||||
Sbjct: 185344 ccaatttgcaggagtcca 185361
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>gb|AF123535.1| Zea mays alcohol dehydrogenase 1 (adh1) gene, adh1-F allele, complete cds
          Length = 160480

 Score =  236 bits (119), Expect = 5e-59
 Identities = 167/183 (91%)
 Strand = Plus / Plus

                                                                          
Query: 250    cagaatgctttggagcagttggcgtccattgatctcattgagctgagcaaggaggctaga 309
              |||||||| |||||||||||||| |||||||||||||| |||||  |||||||||| |||
Sbjct: 112693 cagaatgcgttggagcagttggcatccattgatctcatcgagctatgcaaggaggccaga 112752

                                                                          
Query: 310    attgagcactgccgtgcaactagggacttgagtagctgcggccgctatgtgcaacatgtg 369
              ||||||| ||||||||||||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 112753 attgagcgctgccgtgcaactagagacttgagtagctgtggccgctatgtgcaccatgtg 112812

                                                                          
Query: 370    ctcaactcatgtgggcatgcctcgttatgtgctgagtgtagccagagatgtgatgtctgc 429
              || ||||||||||| |||||||| |||||||||||||| ||||| |||||||| ||||||
Sbjct: 112813 cttaactcatgtggccatgcctcattatgtgctgagtgcagccaaagatgtgacgtctgc 112872

                 
Query: 430    cca 432
              |||
Sbjct: 112873 cca 112875
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>gb|AY691949.1| Zea mays alcohol dehydrogenase 1 (adh1A) gene, complete cds; Fourf
             copia_LTR and Huck gypsy_LTR retrotransposons, complete
             sequence; Opie2 copia_LTR retrotransposon Zeon gypsy_LTR
             and Opie1 copia_LTR retrotransposons, complete sequence;
             Ji copia_LTR retrotransposon, complete sequence; and
             unknown protein (adh1B), cyclin H-1 (adh1C), unknown
             protein (adh1D), hypothetical protein (adh1E), and unknown
             protein (adh1F) genes, complete cds
          Length = 126039

 Score =  236 bits (119), Expect = 5e-59
 Identities = 167/183 (91%)
 Strand = Plus / Plus

                                                                         
Query: 250   cagaatgctttggagcagttggcgtccattgatctcattgagctgagcaaggaggctaga 309
             |||||||| |||||||||||||| |||||||||||||| |||||  |||||||||| |||
Sbjct: 96024 cagaatgcgttggagcagttggcatccattgatctcatcgagctatgcaaggaggccaga 96083

                                                                         
Query: 310   attgagcactgccgtgcaactagggacttgagtagctgcggccgctatgtgcaacatgtg 369
             ||||||| ||||||||||||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 96084 attgagcgctgccgtgcaactagagacttgagtagctgtggccgctatgtgcaccatgtg 96143

                                                                         
Query: 370   ctcaactcatgtgggcatgcctcgttatgtgctgagtgtagccagagatgtgatgtctgc 429
             || ||||||||||| |||||||| |||||||||||||| ||||| |||||||| ||||||
Sbjct: 96144 cttaactcatgtggccatgcctcattatgtgctgagtgcagccaaagatgtgacgtctgc 96203

                
Query: 430   cca 432
             |||
Sbjct: 96204 cca 96206
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>gb|AF124045.1| Sorghum bicolor BAC clone 110K5, partial sequence
          Length = 78195

 Score =  204 bits (103), Expect = 2e-49
 Identities = 163/183 (89%)
 Strand = Plus / Plus

                                                                         
Query: 250   cagaatgctttggagcagttggcgtccattgatctcattgagctgagcaaggaggctaga 309
             ||||||||||||||||||||||| |||||||||||||| |||||  |||||||||| |||
Sbjct: 51854 cagaatgctttggagcagttggcatccattgatctcatcgagctatgcaaggaggccaga 51913

                                                                         
Query: 310   attgagcactgccgtgcaactagggacttgagtagctgcggccgctatgtgcaacatgtg 369
             |||||||  |||||||||||||| |||||||||||||| ||||||||||| |  ||||||
Sbjct: 51914 attgagcgttgccgtgcaactagagacttgagtagctgtggccgctatgttcgtcatgtg 51973

                                                                         
Query: 370   ctcaactcatgtgggcatgcctcgttatgtgctgagtgtagccagagatgtgatgtctgc 429
             || ||||||||||| |||||||| |||||||||||||| ||||| ||||| ||  |||||
Sbjct: 51974 cttaactcatgtggccatgcctcattatgtgctgagtgcagccaaagatgcgacatctgc 52033

                
Query: 430   cca 432
             |||
Sbjct: 52034 cca 52036
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>gb|DQ215136.1| Taeniopygia guttata clone 0061P0010G05 adenylate kinase 1 variant
          1-like mRNA, complete sequence
          Length = 848

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 40 cccgcaccggccgcaccgccgccgc 64
          |||||||||||| ||||||||||||
Sbjct: 46 cccgcaccggccccaccgccgccgc 22
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>gb|AF357202.1| Streptomyces nodosus amphotericin biosynthetic gene cluster, complete
             sequence
          Length = 113193

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 46    ccggccgcaccgccgccgcgc 66
             |||||||||||||||||||||
Sbjct: 81391 ccggccgcaccgccgccgcgc 81411
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>ref|XM_658398.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5886.2), mRNA
          Length = 2319

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 224 ctcccaagtacgacagcgccg 244
           |||||||||||||||||||||
Sbjct: 782 ctcccaagtacgacagcgccg 802
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>ref|XM_750366.1| Aspergillus fumigatus Af293 3-isopropylmalate dehydratase
           (Afu2g11260) partial mRNA
          Length = 2334

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 224 ctcccaagtacgacagcgccg 244
           |||||||||||||||||||||
Sbjct: 782 ctcccaagtacgacagcgccg 802
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>emb|AL021497.1|CEY51A2D Caenorhabditis elegans YAC Y51A2D, complete sequence
          Length = 139259

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 43    gcaccggccgcaccgccgccg 63
             |||||||||||||||||||||
Sbjct: 62535 gcaccggccgcaccgccgccg 62555
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 44      caccggccgcaccgccgccgc 64
               |||||||||||||||||||||
Sbjct: 1291901 caccggccgcaccgccgccgc 1291881
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>gb|AE012111.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 19 of
            460 of the complete genome
          Length = 11732

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 44   caccggccgcaccgccgccgc 64
            |||||||||||||||||||||
Sbjct: 1047 caccggccgcaccgccgccgc 1067
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 44     caccggccgcaccgccgccgc 64
              |||||||||||||||||||||
Sbjct: 199545 caccggccgcaccgccgccgc 199565
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>ref|NM_075224.3| Caenorhabditis elegans Y51A2D.7b (Y51A2D.7) mRNA, complete cds
          Length = 3184

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 43   gcaccggccgcaccgccgccg 63
            |||||||||||||||||||||
Sbjct: 1959 gcaccggccgcaccgccgccg 1979
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 40     cccgcaccggccgcaccgccgccgc 64
              ||||| |||||||||||||||||||
Sbjct: 187242 cccgccccggccgcaccgccgccgc 187218
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 57       gccgccgcgccactccctccccggctcct 85
                ||||||||||||||| |||||| ||||||
Sbjct: 16681871 gccgccgcgccactcactcccccgctcct 16681843



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 80      gctcctccacctccttcgcc 99
               ||||||||||||||||||||
Sbjct: 1589371 gctcctccacctccttcgcc 1589352
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>gb|AC009973.10| Homo sapiens BAC clone RP11-457P23 from 2, complete sequence
          Length = 202383

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 31     ccgcctccccccgcaccggcc 51
              |||||||||||||||||||||
Sbjct: 106468 ccgcctccccccgcaccggcc 106488
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>dbj|AP005308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0047B10
          Length = 158798

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 57    gccgccgcgccactccctccccggctcct 85
             ||||||||||||||| |||||| ||||||
Sbjct: 30565 gccgccgcgccactcactcccccgctcct 30537
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>dbj|AP005575.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1596_C06
          Length = 124721

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 57    gccgccgcgccactccctccccggctcct 85
             ||||||||||||||| |||||| ||||||
Sbjct: 90010 gccgccgcgccactcactcccccgctcct 89982
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>gb|AY106307.1| Zea mays PCO070813 mRNA sequence
          Length = 799

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 44  caccggccgcaccgccgccgc 64
           |||||||||||||||||||||
Sbjct: 299 caccggccgcaccgccgccgc 279
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>ref|NM_186997.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 354

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 49 gccgcaccgccgccgcgcca 68
          ||||||||||||||||||||
Sbjct: 40 gccgcaccgccgccgcgcca 21
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>gb|AY657636.1| Synthetic construct Peudomonas aeruginosa clone FLH041267.01F
           PA2614 gene, partial cds
          Length = 627

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 233 acgacagcgccgccgtccag 252
           ||||||||||||||||||||
Sbjct: 65  acgacagcgccgccgtccag 84
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>gb|AC118640.8| Mus musculus chromosome 15, clone RP24-112A20, complete sequence
          Length = 179510

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 69     ctccctccccggctcctccacctccttc 96
              |||||||||||| |||||||| ||||||
Sbjct: 119914 ctccctccccggatcctccacttccttc 119941
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>gb|AC159209.2| Mus musculus BAC clone RP23-100C6 from chromosome 13, complete sequence
          Length = 212761

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 40     cccgcaccggccgcaccgccgccgcgcc 67
              |||||| || ||||||||||||||||||
Sbjct: 158833 cccgcagcgcccgcaccgccgccgcgcc 158806
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 41      ccgcaccggccgcaccgccg 60
               ||||||||||||||||||||
Sbjct: 2938115 ccgcaccggccgcaccgccg 2938134
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>emb|CR352287.12| Zebrafish DNA sequence from clone DKEY-158P1 in linkage group 24,
             complete sequence
          Length = 153729

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 77    ccggctcctccacctccttcgccggggc 104
             ||||||||||| |||||||| |||||||
Sbjct: 30848 ccggctcctcctcctccttctccggggc 30875
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>gb|BC062123.1| Mus musculus chromodomain protein, Y chromosome-like, mRNA (cDNA
           clone MGC:69916 IMAGE:6826210), complete cds
          Length = 3596

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 40  cccgcaccggccgcaccgccgccgcgcc 67
           |||||| || ||||||||||||||||||
Sbjct: 235 cccgcagcgcccgcaccgccgccgcgcc 262
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>gb|AC141476.3| Mus musculus BAC clone RP24-170D4 from chromosome 13, complete sequence
          Length = 146228

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 40    cccgcaccggccgcaccgccgccgcgcc 67
             |||||| || ||||||||||||||||||
Sbjct: 64820 cccgcagcgcccgcaccgccgccgcgcc 64793
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>gb|AC162940.4| Mus musculus BAC clone RP23-95D3 from chromosome 13, complete sequence
          Length = 218228

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 40     cccgcaccggccgcaccgccgccgcgcc 67
              |||||| || ||||||||||||||||||
Sbjct: 183324 cccgcagcgcccgcaccgccgccgcgcc 183351
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>emb|AL158152.18| Human DNA sequence from clone RP11-2B6 on chromosome 9q22.2-31.1
             Contains a novel gene and a CpG island, complete sequence
          Length = 114517

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 400   gctgagtgtagccagagatg 419
             ||||||||||||||||||||
Sbjct: 21515 gctgagtgtagccagagatg 21534
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>gb|AF451983.1| Homo sapiens hepatoma-derived growth factor 4a (HDGF) mRNA,
           complete cds
          Length = 870

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 73  ctccccggctcctccacctc 92
           ||||||||||||||||||||
Sbjct: 639 ctccccggctcctccacctc 620
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>emb|AL139818.15| Human DNA sequence from clone RP11-311B18 on chromosome 10 Contains a
             novel gene, complete sequence
          Length = 103124

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 412   cagagatgtgatgtctgccc 431
             ||||||||||||||||||||
Sbjct: 64814 cagagatgtgatgtctgccc 64833
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>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29
          Length = 292100

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 40     cccgcaccggccgcaccgccgccg 63
              ||||||||||| ||||||||||||
Sbjct: 184063 cccgcaccggctgcaccgccgccg 184086
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>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29
          Length = 248550

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    cggccgcaccgccgccgcgc 66
             ||||||||||||||||||||
Sbjct: 64611 cggccgcaccgccgccgcgc 64630
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>emb|AL662807.8| Mouse DNA sequence from clone RP23-138O19 on chromosome 13 Contains the
             Hdgfrp1 gene for hepatoma-derived growth factor related
             protein 1 and a ribosomal protein 27A (Rpl27a) pseudogene,
             complete sequence
          Length = 188325

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    ctccccggctcctccacctc 92
             ||||||||||||||||||||
Sbjct: 99325 ctccccggctcctccacctc 99344
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>dbj|AK133357.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4932442B12 product:PWWP domain containing
           1, full insert sequence
          Length = 2001

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 73  ctccccggctcctccacctc 92
           ||||||||||||||||||||
Sbjct: 706 ctccccggctcctccacctc 687
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>dbj|AK133257.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
          library, clone:4932425C17 product:unclassifiable, full
          insert sequence
          Length = 3339

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 73 ctccccggctcctccacctc 92
          ||||||||||||||||||||
Sbjct: 72 ctccccggctcctccacctc 91
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>dbj|AK156509.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830027O21 product:chromodomain protein,
           Y chromosome-like, full insert sequence
          Length = 3487

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 40  cccgcaccggccgcaccgccgccgcgcc 67
           |||||| || ||||||||||||||||||
Sbjct: 147 cccgcagcgcccgcaccgccgccgcgcc 174
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>dbj|AK163913.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:C230048H13
           product:unclassifiable, full insert sequence
          Length = 2413

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 40  cccgcaccggccgcaccgccgccgcgcc 67
           |||||| || ||||||||||||||||||
Sbjct: 84  cccgcagcgcccgcaccgccgccgcgcc 111
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>emb|BX539345.7| Zebrafish DNA sequence from clone DKEY-120M4 in linkage group 9,
             complete sequence
          Length = 94606

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 172   ggtgctggagagggcttgcggatg 195
             ||||||||||||||| ||||||||
Sbjct: 48353 ggtgctggagagggcgtgcggatg 48330
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 49       gccgcaccgccgccgcgcca 68
                ||||||||||||||||||||
Sbjct: 23682492 gccgcaccgccgccgcgcca 23682511
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 71       ccctccccggctcctccacctcct 94
                ||||||||||||||||| ||||||
Sbjct: 23118516 ccctccccggctcctcctcctcct 23118539
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>gb|AC009203.5|AC009203 Drosophila melanogaster, chromosome 2L, region 36E-37C, BAC clone
              BACR07J05, complete sequence
          Length = 172061

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 51     cgcaccgccgccgcgccactccctcccc 78
              ||||||||| |||| |||||||||||||
Sbjct: 108304 cgcaccgcccccgcaccactccctcccc 108331
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>gb|AE004690.1| Pseudomonas aeruginosa PAO1, section 251 of 529 of the complete
            genome
          Length = 10325

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 233  acgacagcgccgccgtccag 252
            ||||||||||||||||||||
Sbjct: 1989 acgacagcgccgccgtccag 1970
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     cggccgcaccgccgccgcgc 66
              ||||||||||||||||||||
Sbjct: 275487 cggccgcaccgccgccgcgc 275506
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>gb|AF180109.1|AF180109 Mus musculus hepatoma-derived growth factor (Hrp1) mRNA, partial
           cds
          Length = 1856

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 73  ctccccggctcctccacctc 92
           ||||||||||||||||||||
Sbjct: 553 ctccccggctcctccacctc 534
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 44      caccggccgcaccgccgccg 63
               ||||||||||||||||||||
Sbjct: 2871127 caccggccgcaccgccgccg 2871146
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 44     caccggccgcaccgccgccg 63
              ||||||||||||||||||||
Sbjct: 445165 caccggccgcaccgccgccg 445184
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>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0417D05
          Length = 165752

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 71    ccctccccggctcctccacctcct 94
             ||||||||||||||||| ||||||
Sbjct: 69164 ccctccccggctcctcctcctcct 69187
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>dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1060_D03
          Length = 102178

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    gccgcaccgccgccgcgcca 68
             ||||||||||||||||||||
Sbjct: 27106 gccgcaccgccgccgcgcca 27125
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>dbj|AP005746.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0018I03
          Length = 145818

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 80     gctcctccacctccttcgcc 99
              ||||||||||||||||||||
Sbjct: 117615 gctcctccacctccttcgcc 117596
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>dbj|AK069376.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012K19, full
           insert sequence
          Length = 1230

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 71  ccctccccggctcctccacctcct 94
           ||||||||||||||||| ||||||
Sbjct: 197 ccctccccggctcctcctcctcct 220
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>dbj|AK061037.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B07, full
           insert sequence
          Length = 1241

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 71  ccctccccggctcctccacctcct 94
           ||||||||||||||||| ||||||
Sbjct: 196 ccctccccggctcctcctcctcct 219
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>emb|CR388184.33| Zebrafish DNA sequence from clone CH211-261O3 in linkage group 8,
             complete sequence
          Length = 180216

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 77    ccggctcctccacctccttcgccggggc 104
             ||||||||||| |||||||| |||||||
Sbjct: 58514 ccggctcctcctcctccttctccggggc 58487
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>gb|AE003660.2| Drosophila melanogaster chromosome 2L, section 69 of 83 of the complete
              sequence
          Length = 232737

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 51     cgcaccgccgccgcgccactccctcccc 78
              ||||||||| |||| |||||||||||||
Sbjct: 134064 cgcaccgcccccgcaccactccctcccc 134091
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>gb|BC108388.1| Mus musculus hepatoma derived growth factor-like 1, mRNA (cDNA
           clone MGC:118278 IMAGE:30920044), complete cds
          Length = 2046

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 73  ctccccggctcctccacctc 92
           ||||||||||||||||||||
Sbjct: 653 ctccccggctcctccacctc 634
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>gb|L22864.1|STMWHIB12X Streptomyces aureofaciens whiB operon, complete sequence
          Length = 4615

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 41  ccgcaccggccgcaccgccgccgc 64
           ||||||||||||||||||| ||||
Sbjct: 514 ccgcaccggccgcaccgcccccgc 537
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>ref|NM_008232.1| Mus musculus hepatoma derived growth factor-like 1 (Hdgfl1), mRNA
          Length = 1333

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 73  ctccccggctcctccacctc 92
           ||||||||||||||||||||
Sbjct: 657 ctccccggctcctccacctc 638
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>gb|L11646.1|STMWHIBX Streptomyces aureofaciens transcription-like factor (whiB) gene,
           complete cds
          Length = 810

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 41  ccgcaccggccgcaccgccgccgc 64
           ||||||||||||||||||| ||||
Sbjct: 514 ccgcaccggccgcaccgcccccgc 537
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>dbj|D63663.1| Mus musculus mRNA for hepatoma-derived growth factor, complete cds,
           strain:RAIB/c
          Length = 1333

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 73  ctccccggctcctccacctc 92
           ||||||||||||||||||||
Sbjct: 657 ctccccggctcctccacctc 638


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,753,317
Number of Sequences: 3902068
Number of extensions: 3753317
Number of successful extensions: 75019
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74010
Number of HSP's gapped (non-prelim): 1008
length of query: 463
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 441
effective length of database: 17,147,199,772
effective search space: 7561915099452
effective search space used: 7561915099452
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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