Clone Name | bastl25f05 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | PATL2_ARATH (Q56ZI2) Patellin-2 | 32 | 0.97 | 2 | DUS15_HUMAN (Q9H1R2) Dual specificity protein phosphatase 15 (EC... | 30 | 2.8 | 3 | CBPE_HUMAN (P16870) Carboxypeptidase E precursor (EC 3.4.17.10) ... | 30 | 3.7 | 4 | AMOT_HUMAN (Q4VCS5) Angiomotin | 29 | 4.8 | 5 | FIBP_ADE02 (P03275) Fiber protein (pIV) | 29 | 4.8 | 6 | MUC1_YEAST (P08640) Mucin-like protein 1 precursor | 29 | 6.3 | 7 | PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM ... | 28 | 8.2 |
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>PATL2_ARATH (Q56ZI2) Patellin-2| Length = 683 Score = 31.6 bits (70), Expect = 0.97 Identities = 24/93 (25%), Positives = 35/93 (37%) Frame = -3 Query: 283 EVAPVAPLTACTGAVEVAPVAPLTARTGALEXXXXXXXXXXXXXXVHRKEKEEG*RVATV 104 E P AP+ A T E+ P AP+T T E KE+E+ V T Sbjct: 198 ETKPAAPVVAETKKEEILPAAPVTTETKVEEKVVPVETTPAAPVTTETKEEEKAAPVTTE 257 Query: 103 EDDAGRGSGAPAGLELHVLPAAATHTQLERKTK 5 + + + E A TQ++R +K Sbjct: 258 TKEEEKAAPGETKKE----EKATASTQVKRASK 286
>DUS15_HUMAN (Q9H1R2) Dual specificity protein phosphatase 15 (EC 3.1.3.48) (EC| 3.1.3.16) Length = 295 Score = 30.0 bits (66), Expect = 2.8 Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 2/40 (5%) Frame = +1 Query: 19 LAACVWRLQA--IREARGRPARHCRGQRRLRQSPLVTPPP 132 LAA V L A +REA GR A+ CR R L+ PPP Sbjct: 166 LAARVALLSAALVREATGRTAQRCRLSPRAAAERLLGPPP 205
>CBPE_HUMAN (P16870) Carboxypeptidase E precursor (EC 3.4.17.10) (CPE)| (Carboxypeptidase H) (CPH) (Enkephalin convertase) (Prohormone-processing carboxypeptidase) Length = 476 Score = 29.6 bits (65), Expect = 3.7 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = +1 Query: 16 SLAACVWRLQAIREARGRPARHCRGQRRLRQ 108 +LAAC W L A + G PA R +RRL+Q Sbjct: 15 ALAACGWLLGAEAQEPGAPAAGMRRRRRLQQ 45
>AMOT_HUMAN (Q4VCS5) Angiomotin| Length = 1084 Score = 29.3 bits (64), Expect = 4.8 Identities = 20/81 (24%), Positives = 23/81 (28%) Frame = -3 Query: 436 TCTVEVAAVAQVASRTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEVAPVAPLT 257 T T+ AA VA+ A VAP Sbjct: 904 TTTMVAAAPVAVAAAAAPAAAAAPSPATAAATAAAVSPAAAGQIPAAASVASAAAVAPSA 963 Query: 256 ACTGAVEVAPVAPLTARTGAL 194 A AV+VAP AP AL Sbjct: 964 AAAAAVQVAPAAPAPVPAPAL 984
>FIBP_ADE02 (P03275) Fiber protein (pIV)| Length = 582 Score = 29.3 bits (64), Expect = 4.8 Identities = 14/25 (56%), Positives = 17/25 (68%) Frame = -3 Query: 268 APLTACTGAVEVAPVAPLTARTGAL 194 APLT +GA+ VA APL +GAL Sbjct: 103 APLTITSGALTVATTAPLIVTSGAL 127
>MUC1_YEAST (P08640) Mucin-like protein 1 precursor| Length = 1367 Score = 28.9 bits (63), Expect = 6.3 Identities = 13/43 (30%), Positives = 18/43 (41%) Frame = +3 Query: 75 APLPRPASSSTVATRHPSSFSFRXXXXXXXXXXXXXXXXSRAP 203 AP+P P+SSS + + PSS F S+ P Sbjct: 864 APVPTPSSSSNITSSAPSSIPFSSTTESFSTGTTVTPSSSKYP 906
>PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) (P145) Length = 1229 Score = 28.5 bits (62), Expect = 8.2 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 10/37 (27%) Frame = -3 Query: 115 VATVEDDAGRGSGAPA----------GLELHVLPAAA 35 +A+V D GRG G PA GL L+++PAAA Sbjct: 17 IASVRDGRGRGCGGPAGAALLGLSLVGLLLYLVPAAA 53 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,980,727 Number of Sequences: 219361 Number of extensions: 390274 Number of successful extensions: 1825 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1716 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1814 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)