ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl25f02 |
|---|---|
| Clone Library Name | barley_pub |
>CMTA5_ARATH (O23463) Calmodulin-binding transcription activator 5| (Signal-responsive protein 6) (Ethylene-induced calmodulin-binding protein f) (EICBP.f) Length = 923 Score = 173 bits (439), Expect(2) = 2e-43 Identities = 78/123 (63%), Positives = 98/123 (79%) Frame = +2 Query: 86 AGRERDPLLRSEIHGFITYADLNFEKLKAEAASRWFRPNEIYAVLANHERFKVHAQPIDK 265 AG + L+ SEIHGF T DL+ + + EA SRW RPNEI+A+L NH+ F ++ +P++ Sbjct: 2 AGVDSGKLIGSEIHGFHTLQDLDIQTMLDEAYSRWLRPNEIHALLCNHKFFTINVKPVNL 61 Query: 266 PVSGTIVLYDRKVVRNFRKDGHNWKKKKDGKTVQEAHEKLKIGNEERVHVYYARGEDNPN 445 P SGTIVL+DRK++RNFRKDGHNWKKKKDGKT++EAHE LK+GNEER+HVYYA GED P Sbjct: 62 PKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTIKEAHEHLKVGNEERIHVYYAHGEDTPT 121 Query: 446 FFR 454 F R Sbjct: 122 FVR 124 Score = 21.6 bits (44), Expect(2) = 2e-43 Identities = 7/11 (63%), Positives = 9/11 (81%) Frame = +1 Query: 445 FL*RCYWLLTR 477 F+ RCYWLL + Sbjct: 122 FVRRCYWLLDK 132
>CMTA6_ARATH (Q9LSP8) Calmodulin-binding transcription activator 6| (Signal-responsive protein 3) (Ethylene-induced calmodulin-binding protein e) (EICBP.e) (Ethylene-induced calmodulin-binding protein 5) (EICBP5) Length = 838 Score = 142 bits (357), Expect(2) = 5e-34 Identities = 68/116 (58%), Positives = 82/116 (70%) Frame = +2 Query: 107 LLRSEIHGFITYADLNFEKLKAEAASRWFRPNEIYAVLANHERFKVHAQPIDKPVSGTIV 286 L+ SEIHGF T DL+ + + EA SRW RPNEI+A+L G I+ Sbjct: 9 LIGSEIHGFHTLQDLDVQTMLEEAKSRWLRPNEIHAILC-----------------GRII 51 Query: 287 LYDRKVVRNFRKDGHNWKKKKDGKTVQEAHEKLKIGNEERVHVYYARGEDNPNFFR 454 L+DRK++RNFRKDGHNWKKKKDG+TV+EAHE LK+GNEER+HVYYA GEDN F R Sbjct: 52 LFDRKMLRNFRKDGHNWKKKKDGRTVKEAHEHLKVGNEERIHVYYAHGEDNTTFVR 107 Score = 21.6 bits (44), Expect(2) = 5e-34 Identities = 7/11 (63%), Positives = 9/11 (81%) Frame = +1 Query: 445 FL*RCYWLLTR 477 F+ RCYWLL + Sbjct: 105 FVRRCYWLLDK 115
>CMTA2_ARATH (Q6NPP4) Calmodulin-binding transcription activator 2| (Signal-responsive protein 4) (Ethylene-induced calmodulin-binding protein c) (EICBP.c) (AtER66) Length = 1050 Score = 134 bits (338), Expect = 1e-31 Identities = 59/102 (57%), Positives = 81/102 (79%) Frame = +2 Query: 149 LNFEKLKAEAASRWFRPNEIYAVLANHERFKVHAQPIDKPVSGTIVLYDRKVVRNFRKDG 328 L+ ++L +EA RW RP EI +L NH++F + ++P ++P SG++ L+DRKV+R FRKDG Sbjct: 13 LDIKQLLSEAQHRWLRPAEICEILRNHQKFHIASEPPNRPPSGSLFLFDRKVLRYFRKDG 72 Query: 329 HNWKKKKDGKTVQEAHEKLKIGNEERVHVYYARGEDNPNFFR 454 HNW+KKKDGKTV+EAHEKLK+G+ + +H YYA GEDN NF R Sbjct: 73 HNWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEDNENFQR 114
>CMTA3_ARATH (Q8GSA7) Calmodulin-binding transcription activator 3| (Signal-responsive protein 1) (Ethylene-induced calmodulin-binding protein a) (EICBP.a) (Ethylene-induced calmodulin-binding protein 1) (EICBP1) Length = 1032 Score = 128 bits (321), Expect = 9e-30 Identities = 57/113 (50%), Positives = 81/113 (71%) Frame = +2 Query: 116 SEIHGFITYADLNFEKLKAEAASRWFRPNEIYAVLANHERFKVHAQPIDKPVSGTIVLYD 295 +E F +L+ ++ +EA RW RP EI +L N++RF++ +P P SG++ ++D Sbjct: 2 AEARRFSPVHELDVGQILSEARHRWLRPPEICEILQNYQRFQISTEPPTTPSSGSVFMFD 61 Query: 296 RKVVRNFRKDGHNWKKKKDGKTVQEAHEKLKIGNEERVHVYYARGEDNPNFFR 454 RKV+R FRKDGHNW+KKKDGKTV+EAHE+LK G+ + +H YYA G+DN NF R Sbjct: 62 RKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGQDNENFQR 114
>CMTA1_ARATH (Q9FY74) Calmodulin-binding transcription activator 1| (Signal-responsive protein 2) (Ethylene-induced calmodulin-binding protein b) (EICBP.b) Length = 1007 Score = 127 bits (319), Expect = 2e-29 Identities = 56/102 (54%), Positives = 77/102 (75%) Frame = +2 Query: 149 LNFEKLKAEAASRWFRPNEIYAVLANHERFKVHAQPIDKPVSGTIVLYDRKVVRNFRKDG 328 L+ E+L +EA RW RP EI +L N+ +F + ++ +P SG++ L+DRKV+R FRKDG Sbjct: 16 LDMEQLLSEAQHRWLRPTEICEILQNYHKFHIASESPTRPASGSLFLFDRKVLRYFRKDG 75 Query: 329 HNWKKKKDGKTVQEAHEKLKIGNEERVHVYYARGEDNPNFFR 454 HNW+KKKDGKT++EAHEKLK+G+ + +H YYA GE N NF R Sbjct: 76 HNWRKKKDGKTIREAHEKLKVGSIDVLHCYYAHGEANENFQR 117
>CMTA4_ARATH (Q9FYG2) Calmodulin-binding transcription activator 4| (Signal-responsive protein 5) (Ethylene-induced calmodulin-binding protein d) (EICBP.d) (Ethylene-induced calmodulin-binding protein 4) (EICBP4) (AtFIN21) Length = 1016 Score = 106 bits (265), Expect = 3e-23 Identities = 44/97 (45%), Positives = 68/97 (70%) Frame = +2 Query: 164 LKAEAASRWFRPNEIYAVLANHERFKVHAQPIDKPVSGTIVLYDRKVVRNFRKDGHNWKK 343 L EA SRW +P E+ +L NHE + +P SG+++L++++V++ FRKDGH W++ Sbjct: 41 LYQEAHSRWLKPPEVLFILQNHESLTLTNTAPQRPTSGSLLLFNKRVLKFFRKDGHQWRR 100 Query: 344 KKDGKTVQEAHEKLKIGNEERVHVYYARGEDNPNFFR 454 K+DG+ + EAHE+LK+GN E ++ YYA GE +P F R Sbjct: 101 KRDGRAIAEAHERLKVGNAEALNCYYAHGEQDPTFRR 137
>CMTA1_HUMAN (Q9Y6Y1) Calmodulin-binding transcription activator 1| Length = 1673 Score = 68.6 bits (166), Expect = 8e-12 Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 2/92 (2%) Frame = +2 Query: 185 RWFRPNEIYAVLANHERFK--VHAQPIDKPVSGTIVLYDRKVVRNFRKDGHNWKKKKDGK 358 RW EI A L E+ + + P +P +G+++LY+RK V+ +RKDG+ WKK+KDGK Sbjct: 73 RWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVK-YRKDGYCWKKRKDGK 131 Query: 359 TVQEAHEKLKIGNEERVHVYYARGEDNPNFFR 454 T +E H KLK+ E ++ Y P F R Sbjct: 132 TTREDHMKLKVQGVECLYGCYVHSSIIPTFHR 163
>CMTA2_HUMAN (O94983) Calmodulin-binding transcription activator 2| Length = 1202 Score = 67.8 bits (164), Expect = 1e-11 Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 2/92 (2%) Frame = +2 Query: 185 RWFRPNEIYAVLANHERFK--VHAQPIDKPVSGTIVLYDRKVVRNFRKDGHNWKKKKDGK 358 RW EI + L E+ + P +P +G+I+LY+RK V+ +RKDG+ WKK+KDGK Sbjct: 40 RWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVK-YRKDGYLWKKRKDGK 98 Query: 359 TVQEAHEKLKIGNEERVHVYYARGEDNPNFFR 454 T +E H KLK+ E ++ Y P F R Sbjct: 99 TTREDHMKLKVQGMECLYGCYVHSSIVPTFHR 130
>CMTA2_MOUSE (Q80Y50) Calmodulin-binding transcription activator 2| Length = 1208 Score = 63.5 bits (153), Expect = 3e-10 Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 2/77 (2%) Frame = +2 Query: 185 RWFRPNEIYAVLANHERFK--VHAQPIDKPVSGTIVLYDRKVVRNFRKDGHNWKKKKDGK 358 RW EI + L E+ + P +P +G+I+LY+RK V+ +RKDG+ WKK+KDGK Sbjct: 40 RWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVK-YRKDGYLWKKRKDGK 98 Query: 359 TVQEAHEKLKIGNEERV 409 T +E H KLK+ E V Sbjct: 99 TTREDHMKLKVQGMEPV 115
>IRK1_HUMAN (P48048) ATP-sensitive inward rectifier potassium channel 1| (Potassium channel, inwardly rectifying subfamily J member 1) (ATP-regulated potassium channel ROM-K) (Kir1.1) Length = 391 Score = 31.2 bits (69), Expect = 1.5 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = +2 Query: 314 FRKDGHNWKKKKDGKTVQEAHEKLKIGNEERVHVYYARGEDNPNF 448 +R D HN+ K + V+ H + + NE+ V RG DNPNF Sbjct: 337 YRVDFHNFSKTVE---VETPHCAMCLYNEKDVRARMKRGYDNPNF 378
>HSF3_CHICK (P38531) Heat shock factor protein 3 (HSF 3) (Heat shock| transcription factor 3) (HSTF 3) (HSF 3C) (HSTF 3C) Length = 467 Score = 31.2 bits (69), Expect = 1.5 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Frame = +2 Query: 32 NRPTGKVEXXXXXXMEGTAGRERDPLL-RSEIHGFITYADLNFEKLKAEAASRWF 193 N P V E +G + DPLL R EI F+ D + E+L+A + + + Sbjct: 333 NAPEDPVSVIDSILNENNSGNQNDPLLDREEIQDFLNCIDASLEELQAMLSGKQY 387
>ALGG_PSEFL (P59828) Poly(beta-D-mannuronate) C5 epimerase precursor (EC| 5.1.3.-) Length = 529 Score = 30.0 bits (66), Expect = 3.3 Identities = 17/58 (29%), Positives = 30/58 (51%) Frame = +2 Query: 227 HERFKVHAQPIDKPVSGTIVLYDRKVVRNFRKDGHNWKKKKDGKTVQEAHEKLKIGNE 400 ++ F + + D +SG ++ DR V NF D ++ DG T+ E+ + L GN+ Sbjct: 341 NDSFIFNNRSYDNKLSGLVL--DRNSVNNFVADNEFYRNHTDGITLYESGDNLLWGNK 396
>PLCL4_HUMAN (O75038) 1-phosphatidylinositol-4,5-bisphosphate| phosphodiesterase-like 4 (EC 3.1.4.11) (Phosphoinositide phospholipase C-like 4) (Phospholipase C-like 4) (Fragment) Length = 1182 Score = 29.6 bits (65), Expect = 4.4 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%) Frame = +3 Query: 3 LHSPACAA*PIDRPGKWKQQPRR--LWRERPGGRGTRS 110 L +P C P PG+ ++ P+ WR+ PGG G+ S Sbjct: 1089 LGAPCCGLDPHAIPGRSREAPKGPGAWRQGPGGSGSMS 1126
>HIP_MYTED (P83425) Heavy metal binding protein HIP| Length = 213 Score = 29.6 bits (65), Expect = 4.4 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%) Frame = -2 Query: 431 HLEHNRHE-PSLHYQSLIFHALLGQF--CHPSFSSNYGHPSESSG 306 H EHN+HE +LH + H + F H +FS+ HP E+ G Sbjct: 55 HTEHNKHEIDALHLEIKQLHEEVEYFKSHHVAFSAELTHPIENLG 99
>SCN7A_HUMAN (Q01118) Sodium channel protein type 7 alpha subunit (Sodium channel| protein type VII alpha subunit) (Putative voltage-gated sodium channel alpha subunit Nax) (Sodium channel protein, cardiac and skeletal muscle alpha-subunit) Length = 1682 Score = 29.3 bits (64), Expect = 5.7 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 5/53 (9%) Frame = -3 Query: 442 WIILTSSIID-----MNPLFITNL*FFMRFLDSFAILLFLPIMAILPKVPDNF 299 WI + +S ID + P F N+ + F++ +FLP+ ++ + DNF Sbjct: 1144 WITIMNSAIDSVAVNIQPHFEVNIYMYCYFINFIIFGVFLPLSMLITVIIDNF 1196
>CX045_HUMAN (Q9H5U8) Protein CXorf45| Length = 459 Score = 28.9 bits (63), Expect = 7.5 Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 5/52 (9%) Frame = -2 Query: 431 HLEHNRHEPSLHYQSLIFHALLGQFCHPSFSS-----NYGHPSESSGQLYDH 291 H H H+P +HY + + + HP S YG P SS + H Sbjct: 18 HSMHYGHDPPMHYSQTAGNVMSNEHFHPQHPSPRQGRGYGMPRNSSRFINRH 69
>IRK1_MOUSE (O88335) ATP-sensitive inward rectifier potassium channel 1| (Potassium channel, inwardly rectifying subfamily J member 1) (ATP-regulated potassium channel ROM-K) (Kir1.1) Length = 372 Score = 28.9 bits (63), Expect = 7.5 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = +2 Query: 314 FRKDGHNWKKKKDGKTVQEAHEKLKIGNEERVHVYYARGEDNPNF 448 +R D HN+ K + V+ H + + NE+ RG DNPNF Sbjct: 318 YRVDFHNFGKTVE---VETPHCAMCLYNEKDARARMKRGYDNPNF 359
>SAT3_ARATH (Q39218) Serine acetyltransferase 3, mitochondrial precursor (EC| 2.3.1.30) (AtSAT-3) (SAT-m) (AtSERAT2;2) Length = 376 Score = 28.9 bits (63), Expect = 7.5 Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 10/113 (8%) Frame = +2 Query: 86 AGRERDPLLRSEIHGFITYADLNFEKLKAEAASRWFRPNEIYAVLANH---ERFKVHAQP 256 A +ERDP S +H F+ + + A W + +I A+L + E F V P Sbjct: 188 AVKERDPACISYVHCFLHFKGFLACQAHRIAHELWTQDRKILALLIQNRVSEAFAVDFHP 247 Query: 257 IDKPVSG-------TIVLYDRKVVRNFRKDGHNWKKKKDGKTVQEAHEKLKIG 394 K +G IV+ + VV N HN GK + H K+ G Sbjct: 248 GAKIGTGILLDHATAIVIGETAVVGNNVSILHNVTLGGTGKQCGDRHPKIGDG 300
>IRK1_RAT (P35560) ATP-sensitive inward rectifier potassium channel 1| (Potassium channel, inwardly rectifying subfamily J member 1) (ATP-regulated potassium channel ROM-K) (KAB-1) (Kir1.1) Length = 391 Score = 28.9 bits (63), Expect = 7.5 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = +2 Query: 314 FRKDGHNWKKKKDGKTVQEAHEKLKIGNEERVHVYYARGEDNPNF 448 +R D HN+ K + V+ H + + NE+ RG DNPNF Sbjct: 337 YRVDFHNFGKTVE---VETPHCAMCLYNEKDARARMKRGYDNPNF 378
>TRMU_MYCPE (Q8CXQ3) Probable tRNA| (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) Length = 370 Score = 28.5 bits (62), Expect = 9.7 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = +2 Query: 308 RNFRKDGHNWKKKKDGKTVQEAHEKLKIGNEERVHVY 418 RNF+ HN+ KK GK + K ++G E +H Y Sbjct: 213 RNFKNFLHNYIDKKPGKIIDIDTSK-EVGTHEGIHFY 248
>IMDH_SHIFL (P0ADG9) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 488 Score = 28.5 bits (62), Expect = 9.7 Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 9/116 (7%) Frame = +2 Query: 116 SEIHGFITYADLNFEKLKAEAASRWFRPNE-IYAVLANHERFKVHAQPIDKPVSGTIVLY 292 +E+ G IT D+ F + S + P E + V R V A+ +K V +V+ Sbjct: 128 NELVGIITGRDVRFVTDLNQPVSVYMTPKERLVTVREGEAREVVLAKMHEKRVEKALVVD 187 Query: 293 DRK------VVRNFRKDGH--NWKKKKDGKTVQEAHEKLKIGNEERVHVYYARGED 436 D V++F+K N K + G+ A GNEERV A G D Sbjct: 188 DEFHLIGMITVKDFQKAERKPNACKDEQGRLRVGAAVGAGAGNEERVDALVAAGVD 243
>IMDH_ECOLI (P0ADG7) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 488 Score = 28.5 bits (62), Expect = 9.7 Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 9/116 (7%) Frame = +2 Query: 116 SEIHGFITYADLNFEKLKAEAASRWFRPNE-IYAVLANHERFKVHAQPIDKPVSGTIVLY 292 +E+ G IT D+ F + S + P E + V R V A+ +K V +V+ Sbjct: 128 NELVGIITGRDVRFVTDLNQPVSVYMTPKERLVTVREGEAREVVLAKMHEKRVEKALVVD 187 Query: 293 DRK------VVRNFRKDGH--NWKKKKDGKTVQEAHEKLKIGNEERVHVYYARGED 436 D V++F+K N K + G+ A GNEERV A G D Sbjct: 188 DEFHLIGMITVKDFQKAERKPNACKDEQGRLRVGAAVGAGAGNEERVDALVAAGVD 243
>IMDH_ECO57 (P0ADG8) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 488 Score = 28.5 bits (62), Expect = 9.7 Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 9/116 (7%) Frame = +2 Query: 116 SEIHGFITYADLNFEKLKAEAASRWFRPNE-IYAVLANHERFKVHAQPIDKPVSGTIVLY 292 +E+ G IT D+ F + S + P E + V R V A+ +K V +V+ Sbjct: 128 NELVGIITGRDVRFVTDLNQPVSVYMTPKERLVTVREGEAREVVLAKMHEKRVEKALVVD 187 Query: 293 DRK------VVRNFRKDGH--NWKKKKDGKTVQEAHEKLKIGNEERVHVYYARGED 436 D V++F+K N K + G+ A GNEERV A G D Sbjct: 188 DEFHLIGMITVKDFQKAERKPNACKDEQGRLRVGAAVGAGAGNEERVDALVAAGVD 243 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,564,807 Number of Sequences: 219361 Number of extensions: 1354980 Number of successful extensions: 3650 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 3548 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3646 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3304846491 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
