Clone Name	bastl25e11
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AK068454.1| Oryza sativa (japonica cultivar-group) cDNA clon...	486	e-134
2	ref|NM_187618.1| Oryza sativa (japonica cultivar-group), predic...	404	e-109
3	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	155	1e-34
4	gb|AC104473.2| Oryza sativa (japonica cultivar-group) chromosome...	155	1e-34
5	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	155	1e-34
6	ref|XM_477026.1| Oryza sativa (japonica cultivar-group), mRNA	72	2e-09
7	dbj|AK100095.1| Oryza sativa (japonica cultivar-group) cDNA clon...	72	2e-09
8	ref|NM_119610.2| Arabidopsis thaliana clathrin binding AT4G34450...	70	7e-09
9	gb|AC146746.15| Medicago truncatula clone mth2-108p9, complete s...	52	0.002
10	gb|AC145897.3| Pan troglodytes BAC clone RP43-8K4 from 7, comple...	42	1.6
11	emb|CR940310.6| M.truncatula DNA sequence from clone MTH2-5D8 on...	42	1.6
12	emb|CR769775.11| Human DNA sequence from clone RP11-449H15 on ch...	42	1.6
13	emb|AL935212.11| Human DNA sequence from clone RP11-160N1 on chr...	42	1.6
14	emb|BX005037.5| Human DNA sequence from clone RP11-34H11 on chro...	42	1.6
15	emb|AL627230.15| Human DNA sequence from clone RP11-12A20 on chr...	42	1.6
16	emb|AL591926.8| Human DNA sequence from clone RP11-157L3 on chro...	42	1.6
17	emb|AL391987.15| Human DNA sequence from clone RP11-374M1 on chr...	42	1.6
18	emb|AL390198.17| Human DNA sequence from clone RP13-401N8 on chr...	42	1.6
19	emb|AL162731.33| Human DNA sequence from clone RP11-292F9 on chr...	42	1.6
20	emb|AL078587.18|HSDJ760C5 Human DNA sequence from clone RP4-760C...	42	1.6
21	gb|AC090894.10| Homo sapiens chromosome 17, clone RP11-744K17, c...	42	1.6
22	emb|AL161585.2|ATCHRIV81 Arabidopsis thaliana DNA chromosome 4, ...	42	1.6
23	emb|AL035521.1|ATF10M10 Arabidopsis thaliana DNA chromosome 4, B...	42	1.6
24	emb|AL023094.2|ATT4L20 Arabidopsis thaliana DNA chromosome 4, BA...	42	1.6
25	gb|AC129805.7| Homo sapiens 12 BAC RP11-125N22 (Roswell Park Can...	42	1.6
26	gb|AC020928.7| Homo sapiens chromosome 19 clone CTD-2162K18, com...	42	1.6
27	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	42	1.6
28	gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome	42	1.6
29	dbj|AP005259.3| Oryza sativa (japonica cultivar-group) genomic D...	42	1.6
30	gb|AC087575.11| Homo sapiens chromosome 17, clone RP11-305L6, co...	42	1.6
31	emb|AL627306.15| Human DNA sequence from clone RP11-81A9 on chro...	42	1.6
32	gb|AC166159.2| Mus musculus BAC clone RP24-129B16 from chromosom...	40	6.1
33	gb|AY234384.1|AY234384S1 Rubrivivax gelatinosus strain S1 5' reg...	40	6.1
34	ref|XM_598831.2| PREDICTED: Bos taurus similar to PR-domain zinc...	40	6.1
35	ref|XM_865806.1| PREDICTED: Bos taurus similar to PR-domain zinc...	40	6.1
36	ref|XM_867855.1| PREDICTED: Bos taurus similar to PR-domain zinc...	40	6.1
37	gb|AC131106.4| Mus musculus chromosome 15 clone RP23-301M20, com...	40	6.1
38	gb|AC104789.4| Homo sapiens BAC clone RP11-138B1 from 7, complet...	40	6.1
39	emb|AL354775.12| Human DNA sequence from clone RP11-223F20 on ch...	40	6.1
40	gb|AF007402.1|AH006794S09 Mus musculus lysosomal acid lipase gen...	40	6.1
41	emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4,...	40	6.1
42	gb|AC090651.3| Homo sapiens chromosome 15 clone RP11-344A16 map ...	40	6.1
43	gb|AC025916.5| Homo sapiens chromosome 15 clone CTD-2323M6 map 1...	40	6.1
44	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	40	6.1
45	gb|AF031110.1|AF031110 Mus musculus clone K127 candidate target ...	40	6.1
46	dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co...	40	6.1
47	gb|AE004775.1| Pseudomonas aeruginosa PAO1, section 336 of 529 o...	40	6.1
48	ref|XM_573525.1| PREDICTED: Rattus norvegicus similar to 9630058...	40	6.1
49	dbj|AB025605.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	40	6.1
50	gb|AY880027.1| Pseudomonas aeruginosa alginate biosynthesis prot...	40	6.1
51	gb|AC102249.16| Mus musculus chromosome 19, clone RP24-160D21, c...	40	6.1
52	emb|AL928641.14| Mouse DNA sequence from clone RP23-272N6 on chr...	40	6.1
53	gb|AC174770.1| Gasterosteus aculeatus clone VMRC28-84C03, comple...	40	6.1
54	emb|AL359760.10| Human DNA sequence from clone RP11-556K13 on ch...	40	6.1
55	emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4,...	40	6.1
56	gb|AC166064.4| Mus musculus BAC clone RP23-52K8 from chromosome ...	40	6.1
57	emb|AL591946.14| Mouse DNA sequence from clone RP23-290M7 on chr...	40	6.1
58	gb|M30880.1|MUSTCBYAJ Mouse T-cell receptor beta-chain V-region ...	40	6.1
59	gb|M37181.1|PSEALG76 P.aeruginosa alg76 gene, complete cds	40	6.1
60	dbj|AB001942.1| Mus musculus mRNA for TCR beta chain, partial cds	40	6.1
61	emb|AL669955.6| Mouse DNA sequence from clone RP23-188F1 on chro...	40	6.1

---

>dbj|AK068454.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155G01, full
           insert sequence
          Length = 3214

 Score =  486 bits (245), Expect = e-134
 Identities = 374/417 (89%)
 Strand = Plus / Plus

                                                                       
Query: 39  cgtcgcatgcctcgctccctcgccggcgacctcaccgacccggagatggcgcagccctac 98
           |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 136 cgtcgcatgcctcgctccctcgccggcgacctcaccgatccggagatggcgcagccgtac 195

                                                                       
Query: 99  atgaagaaggacgacgacgactccgacatcgagtactcaccatttttcgggattgagaag 158
           ||||||||||| |||||||||   ||| | |||||||| |||||||  ||||||||||||
Sbjct: 196 atgaagaaggatgacgacgacgaggacgttgagtactcgccattttatgggattgagaag 255

                                                                       
Query: 159 ggggctgttctgcaggaggcacgggctttccatgatccccagcttgatgccagaagatgc 218
           || || ||||||||||||||| |||||||||||||||| |||||||||||||| |  |||
Sbjct: 256 ggagccgttctgcaggaggcaagggctttccatgatccgcagcttgatgccaggaagtgc 315

                                                                       
Query: 219 tcgcaagttatcaccaagttattatatttaattaaccaaggagagtcctttacaaaggtt 278
           |||||||| ||||| ||| |||| |||||| | |||||||| ||| | || |||||||||
Sbjct: 316 tcgcaagtcatcactaagctattgtatttactcaaccaaggggagacattcacaaaggtt 375

                                                                       
Query: 279 gaggccacagaagtcttctttgcagttactaagttattccagtccaatgatgctggtctc 338
           |||||||||||||| ||||||||||| || ||| | ||||||||||| ||||||||||| 
Sbjct: 376 gaggccacagaagttttctttgcagtaacaaagctgttccagtccaaggatgctggtctt 435

                                                                       
Query: 339 aggaggctggtgtatttgatgatcaaagagctttctccatcatcagatgaggttttcata 398
           ||| ||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 436 aggcggctggtgtatttaatgatcaaagagctttcaccatcatcagatgaggttatcata 495

                                                                    
Query: 399 gtcacaagctcattgatgaaagatatgaacagtaagacagatatgtatcgtgccaat 455
           |||||||||||||| ||||||||||||||||| ||||| |||||||| |||||||||
Sbjct: 496 gtcacaagctcattaatgaaagatatgaacagcaagacggatatgtaccgtgccaat 552

---

>ref|NM_187618.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2481

 Score =  404 bits (204), Expect = e-109
 Identities = 330/372 (88%)
 Strand = Plus / Plus

                                                                       
Query: 84  atggcgcagccctacatgaagaaggacgacgacgactccgacatcgagtactcaccattt 143
           ||||||||||| |||||||||||||| |||||||||   ||| | |||||||| ||||||
Sbjct: 1   atggcgcagccgtacatgaagaaggatgacgacgacgaggacgttgagtactcgccattt 60

                                                                       
Query: 144 ttcgggattgagaagggggctgttctgcaggaggcacgggctttccatgatccccagctt 203
           |  |||||||||||||| || ||||||||||||||| |||||||||||||||| ||||||
Sbjct: 61  tatgggattgagaagggagccgttctgcaggaggcaagggctttccatgatccgcagctt 120

                                                                       
Query: 204 gatgccagaagatgctcgcaagttatcaccaagttattatatttaattaaccaaggagag 263
           |||||||| |  ||||||||||| ||||| ||| |||| |||||| | |||||||| |||
Sbjct: 121 gatgccaggaagtgctcgcaagtcatcactaagctattgtatttactcaaccaaggggag 180

                                                                       
Query: 264 tcctttacaaaggttgaggccacagaagtcttctttgcagttactaagttattccagtcc 323
            | || ||||||||||||||||||||||| ||||||||||| || ||| | |||||||||
Sbjct: 181 acattcacaaaggttgaggccacagaagttttctttgcagtaacaaagctgttccagtcc 240

                                                                       
Query: 324 aatgatgctggtctcaggaggctggtgtatttgatgatcaaagagctttctccatcatca 383
           || ||||||||||| ||| ||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 241 aaggatgctggtcttaggcggctggtgtatttaatgatcaaagagctttcaccatcatca 300

                                                                       
Query: 384 gatgaggttttcatagtcacaagctcattgatgaaagatatgaacagtaagacagatatg 443
           ||||||||| ||||||||||||||||||| ||||||||||||||||| ||||| ||||||
Sbjct: 301 gatgaggttatcatagtcacaagctcattaatgaaagatatgaacagcaagacggatatg 360

                       
Query: 444 tatcgtgccaat 455
           || |||||||||
Sbjct: 361 taccgtgccaat 372

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  155 bits (78), Expect = 1e-34
 Identities = 108/118 (91%)
 Strand = Plus / Plus

                                                                           
Query: 274     aggttgaggccacagaagtcttctttgcagttactaagttattccagtccaatgatgctg 333
               ||||||||||||||||||| ||||||||||| || ||| | ||||||||||| |||||||
Sbjct: 6646358 aggttgaggccacagaagttttctttgcagtaacaaagctgttccagtccaaggatgctg 6646417

                                                                         
Query: 334     gtctcaggaggctggtgtatttgatgatcaaagagctttctccatcatcagatgaggt 391
               |||| ||| ||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 6646418 gtcttaggcggctggtgtatttaatgatcaaagagctttcaccatcatcagatgaggt 6646475



 Score =  137 bits (69), Expect = 4e-29
 Identities = 78/81 (96%)
 Strand = Plus / Plus

                                                                           
Query: 39      cgtcgcatgcctcgctccctcgccggcgacctcaccgacccggagatggcgcagccctac 98
               |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 6644825 cgtcgcatgcctcgctccctcgccggcgacctcaccgatccggagatggcgcagccgtac 6644884

                                    
Query: 99      atgaagaaggacgacgacgac 119
               ||||||||||| |||||||||
Sbjct: 6644885 atgaagaaggatgacgacgac 6644905



 Score =  115 bits (58), Expect = 1e-22
 Identities = 88/98 (89%)
 Strand = Plus / Plus

                                                                           
Query: 129     gagtactcaccatttttcgggattgagaagggggctgttctgcaggaggcacgggctttc 188
               |||||||| |||||||  |||||||||||||| || ||||||||||||||| ||||||||
Sbjct: 6646007 gagtactcgccattttatgggattgagaagggagccgttctgcaggaggcaagggctttc 6646066

                                                     
Query: 189     catgatccccagcttgatgccagaagatgctcgcaagt 226
               |||||||| |||||||||||||| |  |||||||||||
Sbjct: 6646067 catgatccgcagcttgatgccaggaagtgctcgcaagt 6646104



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 63/68 (92%)
 Strand = Plus / Plus

                                                                           
Query: 388     aggttttcatagtcacaagctcattgatgaaagatatgaacagtaagacagatatgtatc 447
               ||||| ||||||||||||||||||| ||||||||||||||||| ||||| |||||||| |
Sbjct: 6646556 aggttatcatagtcacaagctcattaatgaaagatatgaacagcaagacggatatgtacc 6646615

                       
Query: 448     gtgccaat 455
               ||||||||
Sbjct: 6646616 gtgccaat 6646623

---

>gb|AC104473.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1626B05,
             complete sequence
          Length = 127946

 Score =  155 bits (78), Expect = 1e-34
 Identities = 108/118 (91%)
 Strand = Plus / Plus

                                                                         
Query: 274   aggttgaggccacagaagtcttctttgcagttactaagttattccagtccaatgatgctg 333
             ||||||||||||||||||| ||||||||||| || ||| | ||||||||||| |||||||
Sbjct: 31906 aggttgaggccacagaagttttctttgcagtaacaaagctgttccagtccaaggatgctg 31965

                                                                       
Query: 334   gtctcaggaggctggtgtatttgatgatcaaagagctttctccatcatcagatgaggt 391
             |||| ||| ||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 31966 gtcttaggcggctggtgtatttaatgatcaaagagctttcaccatcatcagatgaggt 32023



 Score =  137 bits (69), Expect = 4e-29
 Identities = 78/81 (96%)
 Strand = Plus / Plus

                                                                         
Query: 39    cgtcgcatgcctcgctccctcgccggcgacctcaccgacccggagatggcgcagccctac 98
             |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 30373 cgtcgcatgcctcgctccctcgccggcgacctcaccgatccggagatggcgcagccgtac 30432

                                  
Query: 99    atgaagaaggacgacgacgac 119
             ||||||||||| |||||||||
Sbjct: 30433 atgaagaaggatgacgacgac 30453



 Score =  115 bits (58), Expect = 1e-22
 Identities = 88/98 (89%)
 Strand = Plus / Plus

                                                                         
Query: 129   gagtactcaccatttttcgggattgagaagggggctgttctgcaggaggcacgggctttc 188
             |||||||| |||||||  |||||||||||||| || ||||||||||||||| ||||||||
Sbjct: 31555 gagtactcgccattttatgggattgagaagggagccgttctgcaggaggcaagggctttc 31614

                                                   
Query: 189   catgatccccagcttgatgccagaagatgctcgcaagt 226
             |||||||| |||||||||||||| |  |||||||||||
Sbjct: 31615 catgatccgcagcttgatgccaggaagtgctcgcaagt 31652



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 63/68 (92%)
 Strand = Plus / Plus

                                                                         
Query: 388   aggttttcatagtcacaagctcattgatgaaagatatgaacagtaagacagatatgtatc 447
             ||||| ||||||||||||||||||| ||||||||||||||||| ||||| |||||||| |
Sbjct: 32104 aggttatcatagtcacaagctcattaatgaaagatatgaacagcaagacggatatgtacc 32163

                     
Query: 448   gtgccaat 455
             ||||||||
Sbjct: 32164 gtgccaat 32171

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  155 bits (78), Expect = 1e-34
 Identities = 108/118 (91%)
 Strand = Plus / Plus

                                                                           
Query: 274     aggttgaggccacagaagtcttctttgcagttactaagttattccagtccaatgatgctg 333
               ||||||||||||||||||| ||||||||||| || ||| | ||||||||||| |||||||
Sbjct: 6645571 aggttgaggccacagaagttttctttgcagtaacaaagctgttccagtccaaggatgctg 6645630

                                                                         
Query: 334     gtctcaggaggctggtgtatttgatgatcaaagagctttctccatcatcagatgaggt 391
               |||| ||| ||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 6645631 gtcttaggcggctggtgtatttaatgatcaaagagctttcaccatcatcagatgaggt 6645688



 Score =  137 bits (69), Expect = 4e-29
 Identities = 78/81 (96%)
 Strand = Plus / Plus

                                                                           
Query: 39      cgtcgcatgcctcgctccctcgccggcgacctcaccgacccggagatggcgcagccctac 98
               |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 6644038 cgtcgcatgcctcgctccctcgccggcgacctcaccgatccggagatggcgcagccgtac 6644097

                                    
Query: 99      atgaagaaggacgacgacgac 119
               ||||||||||| |||||||||
Sbjct: 6644098 atgaagaaggatgacgacgac 6644118



 Score =  115 bits (58), Expect = 1e-22
 Identities = 88/98 (89%)
 Strand = Plus / Plus

                                                                           
Query: 129     gagtactcaccatttttcgggattgagaagggggctgttctgcaggaggcacgggctttc 188
               |||||||| |||||||  |||||||||||||| || ||||||||||||||| ||||||||
Sbjct: 6645220 gagtactcgccattttatgggattgagaagggagccgttctgcaggaggcaagggctttc 6645279

                                                     
Query: 189     catgatccccagcttgatgccagaagatgctcgcaagt 226
               |||||||| |||||||||||||| |  |||||||||||
Sbjct: 6645280 catgatccgcagcttgatgccaggaagtgctcgcaagt 6645317



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 63/68 (92%)
 Strand = Plus / Plus

                                                                           
Query: 388     aggttttcatagtcacaagctcattgatgaaagatatgaacagtaagacagatatgtatc 447
               ||||| ||||||||||||||||||| ||||||||||||||||| ||||| |||||||| |
Sbjct: 6645769 aggttatcatagtcacaagctcattaatgaaagatatgaacagcaagacggatatgtacc 6645828

                       
Query: 448     gtgccaat 455
               ||||||||
Sbjct: 6645829 gtgccaat 6645836

---

>ref|XM_477026.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3193

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 141/176 (80%)
 Strand = Plus / Plus

                                                                       
Query: 273 aaggttgaggccacagaagtcttctttgcagttactaagttattccagtccaatgatgct 332
           ||||| ||||||||||| ||||| |||||    || ||||| || || ||||| ||||| 
Sbjct: 425 aaggtggaggccacagaggtcttttttgcgacgaccaagttgtttcaatccaaggatgca 484

                                                                       
Query: 333 ggtctcaggaggctggtgtatttgatgatcaaagagctttctccatcatcagatgaggtt 392
           || || |||||  |||||||  | |||||||| || || || |||||| |||||||||||
Sbjct: 485 ggccttaggagaatggtgtacctcatgatcaaggaactctccccatcagcagatgaggtt 544

                                                                   
Query: 393 ttcatagtcacaagctcattgatgaaagatatgaacagtaagacagatatgtatcg 448
            |||| || || ||||| |||||||| || ||||| || ||||| |||||||||||
Sbjct: 545 atcatcgtgaccagctcgttgatgaaggacatgaatagcaagactgatatgtatcg 600

---

>dbj|AK100095.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004B12, full
           insert sequence
          Length = 3193

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 141/176 (80%)
 Strand = Plus / Plus

                                                                       
Query: 273 aaggttgaggccacagaagtcttctttgcagttactaagttattccagtccaatgatgct 332
           ||||| ||||||||||| ||||| |||||    || ||||| || || ||||| ||||| 
Sbjct: 425 aaggtggaggccacagaggtcttttttgcgacgaccaagttgtttcaatccaaggatgca 484

                                                                       
Query: 333 ggtctcaggaggctggtgtatttgatgatcaaagagctttctccatcatcagatgaggtt 392
           || || |||||  |||||||  | |||||||| || || || |||||| |||||||||||
Sbjct: 485 ggccttaggagaatggtgtacctcatgatcaaggaactctccccatcagcagatgaggtt 544

                                                                   
Query: 393 ttcatagtcacaagctcattgatgaaagatatgaacagtaagacagatatgtatcg 448
            |||| || || ||||| |||||||| || ||||| || ||||| |||||||||||
Sbjct: 545 atcatcgtgaccagctcgttgatgaaggacatgaatagcaagactgatatgtatcg 600

---

>ref|NM_119610.2| Arabidopsis thaliana clathrin binding AT4G34450 mRNA, complete cds
          Length = 2969

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 158/199 (79%)
 Strand = Plus / Plus

                                                                       
Query: 250 ttaaccaaggagagtcctttacaaaggttgaggccacagaagtcttctttgcagttacta 309
           |||||||||| ||||| || || |||||||| || || ||||| |||||| ||||||| |
Sbjct: 252 ttaaccaaggggagtcattcaccaaggttgaagcaacggaagttttcttttcagttacaa 311

                                                                       
Query: 310 agttattccagtccaatgatgctggtctcaggaggctggtgtatttgatgatcaaagagc 369
           || | || || || || ||  | ||| | |||||  |||| || ||||| || || ||| 
Sbjct: 312 agctttttcaatcaaaagacacgggtttgaggagaatggtctacttgatcattaaggagt 371

                                                                       
Query: 370 tttctccatcatcagatgaggttttcatagtcacaagctcattgatgaaagatatgaaca 429
           | ||||||||||| ||||||||| |||| || ||||||||  ||||||| |||||||| |
Sbjct: 372 tatctccatcatctgatgaggttatcatcgtaacaagctctctgatgaaggatatgaata 431

                              
Query: 430 gtaagacagatatgtatcg 448
           |||| |  |||||||||||
Sbjct: 432 gtaaaattgatatgtatcg 450

---

>gb|AC146746.15| Medicago truncatula clone mth2-108p9, complete sequence
          Length = 95118

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 71/86 (82%)
 Strand = Plus / Plus

                                                                         
Query: 132   tactcaccatttttcgggattgagaagggggctgttctgcaggaggcacgggctttccat 191
             ||||| || ||||| |||||||| |||||||||||||| || ||||| |||| |||  ||
Sbjct: 24662 tactccccttttttggggattgaaaagggggctgttcttcaagaggcccgggtttttaat 24721

                                       
Query: 192   gatccccagcttgatgccagaagatg 217
             ||||| || || ||||| || |||||
Sbjct: 24722 gatccacaactagatgctaggagatg 24747



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                              
Query: 274   aggttgaggccacagaagtcttctttgcagttactaagttattccagtc 322
             ||||||| ||||||||||| |||||| | ||||| ||| | ||||||||
Sbjct: 25167 aggttgaagccacagaagttttcttttctgttaccaagcttttccagtc 25215

---

>gb|AC145897.3| Pan troglodytes BAC clone RP43-8K4 from 7, complete sequence
          Length = 153704

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 277   ttgaggccacagaagtcttct 297
             |||||||||||||||||||||
Sbjct: 29610 ttgaggccacagaagtcttct 29590

---

>emb|CR940310.6| M.truncatula DNA sequence from clone MTH2-5D8 on chromosome 3, complete
              sequence
          Length = 121689

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 282    gccacagaagtcttctttgcagttactaagttattccagtc 322
              ||||||||||| |||||||| || |||||| | ||||||||
Sbjct: 119220 gccacagaagttttctttgctgtcactaagcttttccagtc 119260

---

>emb|CR769775.11| Human DNA sequence from clone RP11-449H15 on chromosome 9 Contains a
            novel gene, complete sequence
          Length = 169430

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 277  ttgaggccacagaagtcttct 297
            |||||||||||||||||||||
Sbjct: 6982 ttgaggccacagaagtcttct 6962

---

>emb|AL935212.11| Human DNA sequence from clone RP11-160N1 on chromosome 9 Contains eight
             novel pseudogenes, two novel genes and three CpG islands,
             complete sequence
          Length = 181647

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 277   ttgaggccacagaagtcttct 297
             |||||||||||||||||||||
Sbjct: 56609 ttgaggccacagaagtcttct 56629

---

>emb|BX005037.5| Human DNA sequence from clone RP11-34H11 on chromosome 9 Contains two CpG
              islands, complete sequence
          Length = 173181

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 277    ttgaggccacagaagtcttct 297
              |||||||||||||||||||||
Sbjct: 165581 ttgaggccacagaagtcttct 165561

---

>emb|AL627230.15| Human DNA sequence from clone RP11-12A20 on chromosome 9 Contains six
            novel pseudogenes, the FAM27B gene for family with
            sequence similarity 27, member B, a pseudogene similar to
            part of ribosomal protein L10 (RPL10) and four CpG
            islands, complete sequence
          Length = 194246

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 277  ttgaggccacagaagtcttct 297
            |||||||||||||||||||||
Sbjct: 8137 ttgaggccacagaagtcttct 8157

---

>emb|AL591926.8| Human DNA sequence from clone RP11-157L3 on chromosome 9 Contains
            five novel pseudogenes, a pseudogene similar to part of
            ribosomal protein L10 (RPL10) and two CpG islands,
            complete sequence
          Length = 182366

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 277  ttgaggccacagaagtcttct 297
            |||||||||||||||||||||
Sbjct: 7611 ttgaggccacagaagtcttct 7631

---

>emb|AL391987.15| Human DNA sequence from clone RP11-374M1 on chromosome 9 Contains the
             FAM27C gene for family with sequence similarity 27, member
             C, three novel genes, five novel pseudogenes and six CpG
             islands, complete sequence
          Length = 202081

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 277   ttgaggccacagaagtcttct 297
             |||||||||||||||||||||
Sbjct: 72620 ttgaggccacagaagtcttct 72640

---

>emb|AL390198.17| Human DNA sequence from clone RP13-401N8 on chromosome 20 Contains three
              novel genes, a vomeronasal organ phermone receptor family
              pseudogene, a novel zinc-finger pseudogene and nine CpG
              islands, complete sequence
          Length = 167717

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 277    ttgaggccacagaagtcttct 297
              |||||||||||||||||||||
Sbjct: 121896 ttgaggccacagaagtcttct 121876

---

>emb|AL162731.33| Human DNA sequence from clone RP11-292F9 on chromosome 9 Contains four
             novel genes, three novel pseudogenes and two CpG islands,
             complete sequence
          Length = 188062

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 277   ttgaggccacagaagtcttct 297
             |||||||||||||||||||||
Sbjct: 29025 ttgaggccacagaagtcttct 29045

---

>emb|AL078587.18|HSDJ760C5 Human DNA sequence from clone RP4-760C5 on chromosome 20 Contains an exon
              for a protein similar to  ABCC7 (ATP-binding cassette,
              sub-family C (CFTR/MRP),member 7), two novel genes and two
              CpG islands, complete sequence
          Length = 124489

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 277    ttgaggccacagaagtcttct 297
              |||||||||||||||||||||
Sbjct: 123679 ttgaggccacagaagtcttct 123699

---

>gb|AC090894.10| Homo sapiens chromosome 17, clone RP11-744K17, complete sequence
          Length = 150680

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 277    ttgaggccacagaagtcttct 297
              |||||||||||||||||||||
Sbjct: 140663 ttgaggccacagaagtcttct 140643

---

>emb|AL161585.2|ATCHRIV81 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 81
          Length = 195921

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                          
Query: 388    aggttttcatagtcacaagctcattgatgaaagatatgaacagtaagacagatatgtatc 447
              ||||| |||| || ||||||||  ||||||| |||||||| ||||| |  ||||||||||
Sbjct: 118377 aggttatcatcgtaacaagctctctgatgaaggatatgaatagtaaaattgatatgtatc 118436

               
Query: 448    g 448
              |
Sbjct: 118437 g 118437

---

>emb|AL035521.1|ATF10M10 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M10 (ESSA project)
          Length = 114367

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                          
Query: 388    aggttttcatagtcacaagctcattgatgaaagatatgaacagtaagacagatatgtatc 447
              ||||| |||| || ||||||||  ||||||| |||||||| ||||| |  ||||||||||
Sbjct: 109857 aggttatcatcgtaacaagctctctgatgaaggatatgaatagtaaaattgatatgtatc 109916

               
Query: 448    g 448
              |
Sbjct: 109917 g 109917

---

>emb|AL023094.2|ATT4L20 Arabidopsis thaliana DNA chromosome 4, BAC clone T4L20 (ESSA project)
          Length = 125502

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                        
Query: 388  aggttttcatagtcacaagctcattgatgaaagatatgaacagtaagacagatatgtatc 447
            ||||| |||| || ||||||||  ||||||| |||||||| ||||| |  ||||||||||
Sbjct: 8688 aggttatcatcgtaacaagctctctgatgaaggatatgaatagtaaaattgatatgtatc 8747

             
Query: 448  g 448
            |
Sbjct: 8748 g 8748

---

>gb|AC129805.7| Homo sapiens 12 BAC RP11-125N22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 165378

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 277    ttgaggccacagaagtcttct 297
              |||||||||||||||||||||
Sbjct: 106268 ttgaggccacagaagtcttct 106288

---

>gb|AC020928.7| Homo sapiens chromosome 19 clone CTD-2162K18, complete sequence
          Length = 109666

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 277   ttgaggccacagaagtcttct 297
             |||||||||||||||||||||
Sbjct: 29053 ttgaggccacagaagtcttct 29033

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                           
Query: 388     aggttttcatagtcacaagctcattgatgaaagatatgaacagtaagacagatatgtatc 447
               ||||| |||| || || ||||| |||||||| || ||||| || ||||| ||||||||||
Sbjct: 5485936 aggttatcatcgtgaccagctcgttgatgaaggacatgaatagcaagactgatatgtatc 5485995

                
Query: 448     g 448
               |
Sbjct: 5485996 g 5485996

---

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 65      cgacctcaccgacccggagatggcg 89
               |||||||||||| ||||||||||||
Sbjct: 2798426 cgacctcaccgatccggagatggcg 2798450



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 58     tcgccggcgacctcaccgacc 78
              |||||||||||||||||||||
Sbjct: 167698 tcgccggcgacctcaccgacc 167718

---

>dbj|AP005259.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0519E02
          Length = 139321

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                          
Query: 388    aggttttcatagtcacaagctcattgatgaaagatatgaacagtaagacagatatgtatc 447
              ||||| |||| || || ||||| |||||||| || ||||| || ||||| ||||||||||
Sbjct: 119917 aggttatcatcgtgaccagctcgttgatgaaggacatgaatagcaagactgatatgtatc 119976

               
Query: 448    g 448
              |
Sbjct: 119977 g 119977

---

>gb|AC087575.11| Homo sapiens chromosome 17, clone RP11-305L6, complete sequence
          Length = 198756

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 277   ttgaggccacagaagtcttct 297
             |||||||||||||||||||||
Sbjct: 47072 ttgaggccacagaagtcttct 47052

---

>emb|AL627306.15| Human DNA sequence from clone RP11-81A9 on chromosome 9, complete
             sequence
          Length = 51133

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 277   ttgaggccacagaagtcttct 297
             |||||||||||||||||||||
Sbjct: 44152 ttgaggccacagaagtcttct 44172

---

>gb|AC166159.2| Mus musculus BAC clone RP24-129B16 from chromosome 15, complete sequence
          Length = 216481

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 263    gtcctttacaaaggttgagg 282
              ||||||||||||||||||||
Sbjct: 158484 gtcctttacaaaggttgagg 158503

---

>gb|AY234384.1|AY234384S1 Rubrivivax gelatinosus strain S1 5' region photosynthesis gene
            cluster, partial sequence
          Length = 24637

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 62   cggcgacctcaccgacccgg 81
            ||||||||||||||||||||
Sbjct: 1930 cggcgacctcaccgacccgg 1949

---

>ref|XM_598831.2| PREDICTED: Bos taurus similar to PR-domain zinc finger protein 7
           (LOC520584), partial mRNA
          Length = 699

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 260 agagtcctttacaaaggttg 279
           ||||||||||||||||||||
Sbjct: 195 agagtcctttacaaaggttg 176

---

>ref|XM_865806.1| PREDICTED: Bos taurus similar to PR-domain zinc finger protein 7
           (LOC614338), partial mRNA
          Length = 928

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 260 agagtcctttacaaaggttg 279
           ||||||||||||||||||||
Sbjct: 228 agagtcctttacaaaggttg 209

---

>ref|XM_867855.1| PREDICTED: Bos taurus similar to PR-domain zinc finger protein 7
           (LOC615918), partial mRNA
          Length = 1050

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 260 agagtcctttacaaaggttg 279
           ||||||||||||||||||||
Sbjct: 183 agagtcctttacaaaggttg 164

---

>gb|AC131106.4| Mus musculus chromosome 15 clone RP23-301M20, complete sequence
          Length = 218875

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 263  gtcctttacaaaggttgagg 282
            ||||||||||||||||||||
Sbjct: 4660 gtcctttacaaaggttgagg 4679

---

>gb|AC104789.4| Homo sapiens BAC clone RP11-138B1 from 7, complete sequence
          Length = 142048

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 286   cagaagtcttctttgcagttacta 309
             |||||||||||||| |||||||||
Sbjct: 20248 cagaagtcttctttccagttacta 20271

---

>emb|AL354775.12| Human DNA sequence from clone RP11-223F20 on chromosome 13 Contains a
              novel heterogeneous nuclear ribonucleoprotein family A
              protein and a novel gene, complete sequence
          Length = 168897

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 402    acaagctcattgatgaaaga 421
              ||||||||||||||||||||
Sbjct: 106033 acaagctcattgatgaaaga 106052

---

>gb|AF007402.1|AH006794S09 Mus musculus lysosomal acid lipase gene, intron 6, 5' end
          Length = 387

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 9   cccacccgccaccccgctccacca 32
           ||||||| ||||||||||||||||
Sbjct: 136 cccaccccccaccccgctccacca 159

---

>emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0038O10,
              complete sequence
          Length = 141545

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     tcgccggcgacctcaccgac 77
              ||||||||||||||||||||
Sbjct: 137246 tcgccggcgacctcaccgac 137265

---

>gb|AC090651.3| Homo sapiens chromosome 15 clone RP11-344A16 map 15q21.3, complete
              sequence
          Length = 208230

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 157    agggggctgttctgcaggag 176
              ||||||||||||||||||||
Sbjct: 131061 agggggctgttctgcaggag 131042

---

>gb|AC025916.5| Homo sapiens chromosome 15 clone CTD-2323M6 map 15q21.3, complete
             sequence
          Length = 109403

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   agggggctgttctgcaggag 176
             ||||||||||||||||||||
Sbjct: 27285 agggggctgttctgcaggag 27266

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 58       tcgccggcgacctcaccgac 77
                ||||||||||||||||||||
Sbjct: 26360669 tcgccggcgacctcaccgac 26360688

---

>gb|AF031110.1|AF031110 Mus musculus clone K127 candidate target gene for EVI-1 zinc finger
           protein
          Length = 331

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 236 gttattatatttaattaacc 255
           ||||||||||||||||||||
Sbjct: 69  gttattatatttaattaacc 88

---

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 62      cggcgacctcaccgacccggagat 85
               |||| |||||||||||||||||||
Sbjct: 7262592 cggccacctcaccgacccggagat 7262615

---

>gb|AE004775.1| Pseudomonas aeruginosa PAO1, section 336 of 529 of the complete
            genome
          Length = 11407

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 110  cgacgacgactccgacatcg 129
            ||||||||||||||||||||
Sbjct: 3890 cgacgacgactccgacatcg 3909

---

>ref|XM_573525.1| PREDICTED: Rattus norvegicus similar to 9630058J23Rik protein
           (LOC498297), mRNA
          Length = 1325

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 106 aggacgacgacgactccgac 125
           ||||||||||||||||||||
Sbjct: 881 aggacgacgacgactccgac 900

---

>dbj|AB025605.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F5H8
          Length = 70098

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 414   atgaaagatatgaacagtaa 433
             ||||||||||||||||||||
Sbjct: 66867 atgaaagatatgaacagtaa 66886

---

>gb|AY880027.1| Pseudomonas aeruginosa alginate biosynthesis protein AlgE (algE)
            gene, partial cds
          Length = 1172

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 110  cgacgacgactccgacatcg 129
            ||||||||||||||||||||
Sbjct: 1050 cgacgacgactccgacatcg 1069

---

>gb|AC102249.16| Mus musculus chromosome 19, clone RP24-160D21, complete sequence
          Length = 212190

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 9      cccacccgccaccccgctccacca 32
              ||||||| ||||||||||||||||
Sbjct: 136094 cccaccccccaccccgctccacca 136071

---

>emb|AL928641.14| Mouse DNA sequence from clone RP23-272N6 on chromosome 2, complete
             sequence
          Length = 153467

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 424   tgaacagtaagacagatatg 443
             ||||||||||||||||||||
Sbjct: 82326 tgaacagtaagacagatatg 82345

---

>gb|AC174770.1| Gasterosteus aculeatus clone VMRC28-84C03, complete sequence
          Length = 124367

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 50     tcgctccctcgccggcgacc 69
              ||||||||||||||||||||
Sbjct: 108070 tcgctccctcgccggcgacc 108051

---

>emb|AL359760.10| Human DNA sequence from clone RP11-556K13 on chromosome 1 Contains a
             laminin receptor 1 (ribosomal protein SA, 67kDa) (LAMR1)
             pseudogene and the 3' end of the OLFM3 gene for
             olfactomedin 3, complete sequence
          Length = 79057

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 369   ctttctccatcatcagatga 388
             ||||||||||||||||||||
Sbjct: 31542 ctttctccatcatcagatga 31523

---

>emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074L08,
            complete sequence
          Length = 171551

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 58   tcgccggcgacctcaccgac 77
            ||||||||||||||||||||
Sbjct: 1302 tcgccggcgacctcaccgac 1321

---

>gb|AC166064.4| Mus musculus BAC clone RP23-52K8 from chromosome 17, complete sequence
          Length = 245671

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 278   tgaggccacagaagtcttct 297
             ||||||||||||||||||||
Sbjct: 10654 tgaggccacagaagtcttct 10635

---

>emb|AL591946.14| Mouse DNA sequence from clone RP23-290M7 on chromosome 15, complete
              sequence
          Length = 188892

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 166    ttctgcaggaggcacgggct 185
              ||||||||||||||||||||
Sbjct: 165986 ttctgcaggaggcacgggct 165967

---

>gb|M30880.1|MUSTCBYAJ Mouse T-cell receptor beta-chain V-region (V12-D1.1-J1.1-C0-C2)
           mRNA, partial cds
          Length = 281

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 ggccacagaagtcttctttg 300
           ||||||||||||||||||||
Sbjct: 155 ggccacagaagtcttctttg 174

---

>gb|M37181.1|PSEALG76 P.aeruginosa alg76 gene, complete cds
          Length = 2328

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 110  cgacgacgactccgacatcg 129
            ||||||||||||||||||||
Sbjct: 1579 cgacgacgactccgacatcg 1598

---

>dbj|AB001942.1| Mus musculus mRNA for TCR beta chain, partial cds
          Length = 42

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 ggccacagaagtcttctttg 300
           ||||||||||||||||||||
Sbjct: 21  ggccacagaagtcttctttg 40

---

>emb|AL669955.6| Mouse DNA sequence from clone RP23-188F1 on chromosome 4, complete
             sequence
          Length = 114881

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 296   ctttgcagttactaagttattcca 319
             ||||| ||||||||||||||||||
Sbjct: 35896 ctttgtagttactaagttattcca 35873


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,631,489
Number of Sequences: 3902068
Number of extensions: 4631489
Number of successful extensions: 94539
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94101
Number of HSP's gapped (non-prelim): 434
length of query: 455
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 433
effective length of database: 17,147,199,772
effective search space: 7424737501276
effective search space used: 7424737501276
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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