Clone Name | bastl25d11 |
---|---|
Clone Library Name | barley_pub |
>B3A2_RABIT (P48746) Anion exchange protein 2 (Non-erythroid band 3-like| protein) (AE2 anion exchanger) (Solute carrier family 4 member 2) (B3RP) Length = 1237 Score = 33.1 bits (74), Expect = 0.36 Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 2/98 (2%) Frame = +3 Query: 171 TPRELGFTPFRSPPPQEEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKSIH 350 TP+ G P R P GA EG+ E G++A + STP S+ + Sbjct: 98 TPQGPGRKPRRRPGASPTGATPTIEEGEEDEEEANEAEGARAPTEPSPASTPSSVQFFLQ 157 Query: 351 AQLDAQIPVNADLSQRKPPAKATMLPKRDPPP--LEGA 458 A+ ++R P+ T+LP ++ P EGA Sbjct: 158 EDEGAE-----RKAERTSPSPPTLLPHQEAAPWATEGA 190
>POLR_TYMVA (P20128) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1844 Score = 32.7 bits (73), Expect = 0.47 Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 4/97 (4%) Frame = +3 Query: 162 LPVTPRELGFTPFRS--PPPQEEGALQNS--SEGKIQAPELKPLAGSQAVPKTEGVSTPI 329 +P T L FTP S PP E +L + S + P + G+Q T TPI Sbjct: 567 IPRTTAFLPFTPTTSTAPPDHSEASLPPAFASTSVPRPPPVASSLGAQPPTTTAAPPTPI 626 Query: 330 SLVKSIHAQLDAQIPVNADLSQRKPPAKATMLPKRDP 440 + H D + + + PP +++ +P P Sbjct: 627 EPTQRAHQNSDLTLESSTPIEPPPPPIQSSDIPPSAP 663
>APA_MYCAV (Q48919) Alanine and proline-rich secreted protein apa precursor| (45/47 kDa antigen) (Fibronectin attachment protein) (FAP-A) Length = 381 Score = 32.0 bits (71), Expect = 0.80 Identities = 16/35 (45%), Positives = 20/35 (57%) Frame = +3 Query: 363 AQIPVNADLSQRKPPAKATMLPKRDPPPLEGALPN 467 A P A Q++PP + M+P R PPP GA PN Sbjct: 72 AGAPAPAPNGQQRPPRRRRMIPTRAPPP-AGAPPN 105
>VRP1_YEAST (P37370) Verprolin| Length = 817 Score = 32.0 bits (71), Expect = 0.80 Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 14/94 (14%) Frame = +3 Query: 207 PPPQEEGALQNSSEGKIQAPELKP-----LAGSQAVPKTEGVSTPI---------SLVKS 344 PPP A+ ++S ++A + P L + +VP + S P + Sbjct: 352 PPPPLPAAMSSASTNSVKATPVPPTLAPPLPNTTSVPPNKASSMPAPPPPPPPPPGAFST 411 Query: 345 IHAQLDAQIPVNADLSQRKPPAKATMLPKRDPPP 446 A + IP+ A L PP+ AT +P PPP Sbjct: 412 SSALSASSIPL-APLPPPPPPSVATSVPSAPPPP 444
>HRX_MOUSE (P55200) Zinc finger protein HRX (ALL-1) (Fragment)| Length = 3866 Score = 31.6 bits (70), Expect = 1.0 Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 14/97 (14%) Frame = +3 Query: 204 SPPPQEEGALQNSSEGKIQAPELKPL------AGSQA---VPKTEGVSTPIS-----LVK 341 +PPP+EE A + SS + P KP+ G+ A P+ + VS P S V Sbjct: 1142 APPPREEPAPKKSSS---EPPPRKPVEEKSEEGGAPAPAPAPEPKQVSAPASRKSSKQVS 1198 Query: 342 SIHAQLDAQIPVNADLSQRKPPAKATMLPKRDPPPLE 452 A + Q P A + P A + K+ PPP E Sbjct: 1199 QPAAVVPPQPPSTAPQKKEAPKAVPSEPKKKQPPPPE 1235
>AEX3_CAEEL (O02626) Regulator of presynaptic activity aex-3 (Aboc, expulsion| defective protein 3) Length = 1409 Score = 31.6 bits (70), Expect = 1.0 Identities = 35/98 (35%), Positives = 41/98 (41%), Gaps = 6/98 (6%) Frame = +3 Query: 165 PVTPRELGFTPFRSPPPQEEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKS 344 PV PRE P R+PPP GA EG P L P V T TP +LV + Sbjct: 967 PVPPREAPPIPKRNPPPL--GAPPKVPEGARAPPPLPP---RPKVKTTAVDETPQNLVPN 1021 Query: 345 IHAQLDAQIPVNADL-SQRKP---PAKATMLP--KRDP 440 + AD Q KP PA T LP K++P Sbjct: 1022 NQPAQPSSPSFLADADEQTKPLLKPAPPTTLPVGKQEP 1059 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = +3 Query: 402 PPAKATMLPKRDPPPLEGALP 464 PP +A +PKR+PPPL GA P Sbjct: 969 PPREAPPIPKRNPPPL-GAPP 988
>B3A2_HUMAN (P04920) Anion exchange protein 2 (Non-erythroid band 3-like| protein) (AE2 anion exchanger) (Solute carrier family 4 member 2) (BND3L) Length = 1241 Score = 31.6 bits (70), Expect = 1.0 Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 1/93 (1%) Frame = +3 Query: 171 TPRELGFTPFRSPPPQEEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKSIH 350 TP+ G P R P G EG+ E G++A+ + VSTP S+ Sbjct: 98 TPQGPGRKPRRRPGASPTGETPTIEEGEEDEDEASEAEGARALTQPSPVSTPSSV----- 152 Query: 351 AQLDAQIPVNAD-LSQRKPPAKATMLPKRDPPP 446 Q Q +AD ++R P+ LP ++ P Sbjct: 153 -QFFLQEDDSADRKAERTSPSSPAPLPHQEATP 184
>TEGU_EBV (P03186) Large tegument protein| Length = 3149 Score = 31.2 bits (69), Expect = 1.4 Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 5/96 (5%) Frame = +3 Query: 195 PFRSPPPQEEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKSIHAQLDAQIP 374 P + P P + A N KI P + A P T +S P + + + A P Sbjct: 499 PLQIPIPLPQAAPSNP---KIPLTTPSPSPTAAAAPTTTTLSPPPTQQQPPQSAAPAPSP 555 Query: 375 VNADLSQRKP-----PAKATMLPKRDPPPLEGALPN 467 + L Q++P PA + +LP++ PPP P+ Sbjct: 556 L---LPQQQPTPSAAPAPSPLLPQQQPPPSAARAPS 588
>RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein| Length = 2480 Score = 30.0 bits (66), Expect = 3.1 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 12/50 (24%) Frame = +3 Query: 213 PQEEGALQNSSEGKIQAPELK------------PLAGSQAVPKTEGVSTP 326 P+ EG Q SEG I+APE + P A +A P+ EGV TP Sbjct: 2263 PEAEGEAQPESEG-IEAPEAEGEAQPELEGVEAPEAEEEAQPEPEGVETP 2311
>SYNJ1_RAT (Q62910) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1574 Score = 30.0 bits (66), Expect = 3.1 Identities = 32/100 (32%), Positives = 44/100 (44%) Frame = +3 Query: 165 PVTPRELGFTPFRSPPPQEEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKS 344 P + LG +P SP Q+ + + AP L P+ S+A +T G P+S S Sbjct: 1032 PSSSSGLGTSPSSSP---RTSPCQSPTAPEYSAPSL-PIRPSRAPSRTPG---PLS---S 1081 Query: 345 IHAQLDAQIPVNADLSQRKPPAKATMLPKRDPPPLEGALP 464 A +D Q + SQ T+ PKR PPP A P Sbjct: 1082 QGAPVDTQPAAQKESSQ-------TIEPKRPPPPRPVAPP 1114
>EP400_HUMAN (Q96L91) E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa| SWI2/SNF2-related protein) (Domino homolog) (hDomino) (CAG repeat protein 32) (Trinucleotide repeat-containing gene 12 protein) Length = 3160 Score = 29.6 bits (65), Expect = 4.0 Identities = 20/83 (24%), Positives = 35/83 (42%) Frame = +3 Query: 216 QEEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKSIHAQLDAQIPVNADLSQ 395 Q++ Q ++ ++Q P+++ A S A K G TP L+K +L +Q Sbjct: 2779 QQQQQQQTTTTSQVQVPQIQGQAQSPAQIKAVGKLTPEHLIKMQKQKLQMPPQPPPPQAQ 2838 Query: 396 RKPPAKATMLPKRDPPPLEGALP 464 PP A + + P + P Sbjct: 2839 SAPPQPAAQVQVQTSQPPQQQSP 2861
>TAF1C_HUMAN (Q15572) TATA box-binding protein-associated factor RNA polymerase I| subunit C (TATA box-binding protein-associated factor 1C) (TBP-associated factor 1C) (TBP-associated factor RNA polymerase I 110 kDa) (TAFI110) Length = 869 Score = 29.6 bits (65), Expect = 4.0 Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 11/112 (9%) Frame = +3 Query: 150 LARRLPVTPRELGFTPFRSPPPQEEGALQNSSEGKI-------QAPELKPLAGSQAVP-- 302 +AR + R+LG P PPP E L++ ++ A + G + P Sbjct: 686 MARGQLLLQRDLGSLPAAEPPPAPESGLEDKLSERLGEAWAGRGAAWWERQQGRTSEPGR 745 Query: 303 --KTEGVSTPISLVKSIHAQLDAQIPVNADLSQRKPPAKATMLPKRDPPPLE 452 + T +S S+ +D ++ S PPA A LP PP E Sbjct: 746 QTRRPKRRTQLSSSFSLSGHVDPSEDTSSPHSPEWPPADALPLPPTTPPSQE 797
>PSC_DROME (P35820) Polycomb group protein Psc (Protein posterior sex combs)| Length = 1601 Score = 29.6 bits (65), Expect = 4.0 Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 6/107 (5%) Frame = +3 Query: 147 DLARRLPVTPRELGFTPFRSP------PPQEEGALQNSSEGKIQAPELKPLAGSQAVPKT 308 +LA +LP +GF P ++P PP ++ N+ Q+ + K + G Q+ P Sbjct: 1311 ELAPKLPTLAPFVGFNPLQNPAAGKKVPPSKKS--PNAGAAAHQSGQQKLVNGGQSQPAQ 1368 Query: 309 EGVSTPISLVKSIHAQLDAQIPVNADLSQRKPPAKATMLPKRDPPPL 449 + S P AQ + Q + PP + K P P+ Sbjct: 1369 QKTSPP--------AQKNQQQVKKVSKNPTPPPPSLPAVGKMMPHPV 1407
>Y046_UREPA (Q9PR99) Hypothetical protein UU046| Length = 791 Score = 29.3 bits (64), Expect = 5.2 Identities = 24/91 (26%), Positives = 36/91 (39%) Frame = +3 Query: 195 PFRSPPPQEEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKSIHAQLDAQIP 374 P +PP +EE + + PE+KP + PK + + P V++ P Sbjct: 93 PIPTPPKKEELKKPEIKPEEPKKPEIKPEPIPK--PKPQPIPQPTPPVETK--------P 142 Query: 375 VNADLSQRKPPAKATMLPKRDPPPLEGALPN 467 L PP K P+ DP P +PN Sbjct: 143 KEELLPPSPPPPKEEPKPEPDPQPQPQQIPN 173
>Y044_UREPA (Q9PRA1) Hypothetical protein UU044| Length = 782 Score = 29.3 bits (64), Expect = 5.2 Identities = 23/91 (25%), Positives = 36/91 (39%) Frame = +3 Query: 195 PFRSPPPQEEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKSIHAQLDAQIP 374 P +PP +EE + + + PE+KP PK E + P +++ P Sbjct: 93 PIPTPPKKEELKKPDIKPEEPKKPEIKP------EPKPEPIPQPAPPIET--------KP 138 Query: 375 VNADLSQRKPPAKATMLPKRDPPPLEGALPN 467 L PP K P+ +P P +PN Sbjct: 139 KEELLPPNPPPPKEEPKPEPNPQPQPQQVPN 169
>SWR1_GIBZE (Q4IAK7) Helicase SWR1 (EC 3.6.1.-)| Length = 1691 Score = 29.3 bits (64), Expect = 5.2 Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 7/95 (7%) Frame = +3 Query: 180 ELGFTPFRSPPPQEEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKSIHAQL 359 E+ P P E GAL+ S++ ++ E P A +G+S + V+ +Q Sbjct: 662 EMSLIQMPDPEPHESGALEKSTKEAVEEKEQIPAAMQDVAAGQDGLSNTDNNVQEPASQ- 720 Query: 360 DAQIPVNAD-------LSQRKPPAKATMLPKRDPP 443 D + + + L+ KP + AT P +PP Sbjct: 721 DNDVAMTGNDPEEPSALTFEKPHSPATE-PATNPP 754
>TMPSD_MOUSE (Q5U405) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic| serine protease) (Membrane-type mosaic serine protease) Length = 543 Score = 28.9 bits (63), Expect = 6.8 Identities = 17/76 (22%), Positives = 36/76 (47%) Frame = +3 Query: 192 TPFRSPPPQEEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKSIHAQLDAQI 371 +P R+PPPQ A + + +AP + +G + ++ ++ + V + A + Sbjct: 51 SPARAPPPQASPARASPA----RAPPSRSSSGRSSSARSASTTSSPTRVYLVRATPVGAV 106 Query: 372 PVNADLSQRKPPAKAT 419 P+ A ++ P +AT Sbjct: 107 PIRASPARSAPATRAT 122
>SF3A1_MOUSE (Q8K4Z5) Splicing factor 3 subunit 1 (SF3a120)| Length = 791 Score = 28.9 bits (63), Expect = 6.8 Identities = 27/102 (26%), Positives = 37/102 (36%) Frame = +3 Query: 162 LPVTPRELGFTPFRSPPPQEEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVK 341 +PV PR + R PP G++ I AP + + A P P +V Sbjct: 592 VPVMPRPPMASVVRLPP----GSVIAPMPPIIHAPRINVVPMPPAAPPIMAPRPPPMIVP 647 Query: 342 SIHAQLDAQIPVNADLSQRKPPAKATMLPKRDPPPLEGALPN 467 + PV PA A M P PPP+E P+ Sbjct: 648 TAFVPAPPVAPV---------PAPAPMPPVHPPPPMEDEPPS 680
>RUSC1_MOUSE (Q8BG26) RUN and SH3 domain-containing protein 1| Length = 893 Score = 28.9 bits (63), Expect = 6.8 Identities = 19/63 (30%), Positives = 29/63 (46%) Frame = +3 Query: 258 QAPELKPLAGSQAVPKTEGVSTPISLVKSIHAQLDAQIPVNADLSQRKPPAKATMLPKRD 437 + P L GS A P+ ++ K + ++ AQ P + R PPA ++P R Sbjct: 343 ELPPTGSLGGSLAPPRE------VTTFKELRSRSRAQPP---PVPPRDPPAGWALVPPRP 393 Query: 438 PPP 446 PPP Sbjct: 394 PPP 396
>SYNJ1_MOUSE (Q8CHC4) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1574 Score = 28.9 bits (63), Expect = 6.8 Identities = 30/100 (30%), Positives = 42/100 (42%) Frame = +3 Query: 165 PVTPRELGFTPFRSPPPQEEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKS 344 P + LG +P SP Q+ + + AP L P+ S+A +T G + S Sbjct: 1032 PSSSSGLGTSPSSSP---RTSPCQSPTVPEYSAPSL-PIRPSRAPSRTPGPPS------S 1081 Query: 345 IHAQLDAQIPVNADLSQRKPPAKATMLPKRDPPPLEGALP 464 + +D Q D SQ T+ PKR PPP A P Sbjct: 1082 QGSPVDTQPAAQKDSSQ-------TLEPKRPPPPRPVAPP 1114
>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1| (Ser/Arg-related nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160) Length = 904 Score = 28.9 bits (63), Expect = 6.8 Identities = 22/104 (21%), Positives = 38/104 (36%) Frame = +3 Query: 156 RRLPVTPRELGFTPFRSPPPQEEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISL 335 +R +PR SPPP GA + + +P +P+ P+ P + Sbjct: 680 KRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPE------PKKI 733 Query: 336 VKSIHAQLDAQIPVNADLSQRKPPAKATMLPKRDPPPLEGALPN 467 K+ + V++ S P A P P P++ P+ Sbjct: 734 KKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPS 777
>SMO_MOUSE (P56726) Smoothened homolog precursor (SMO)| Length = 793 Score = 28.9 bits (63), Expect = 6.8 Identities = 17/46 (36%), Positives = 26/46 (56%) Frame = +3 Query: 150 LARRLPVTPRELGFTPFRSPPPQEEGALQNSSEGKIQAPELKPLAG 287 +ARR + P+++ TP +P P EE A E +I +PEL+ G Sbjct: 630 VARRGAILPQDVSVTPVATPVPPEEQANMWLVEAEI-SPELEKRLG 674
>RCOR2_XENLA (Q6NRZ0) REST corepressor 2| Length = 503 Score = 28.9 bits (63), Expect = 6.8 Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 8/95 (8%) Frame = +3 Query: 204 SPPPQEEGALQNSSEGKIQAPELKP--------LAGSQAVPKTEGVSTPISLVKSIHAQL 359 SPPP + N + G Q P + + SQ P + +SL + L Sbjct: 393 SPPPASTD-MSNKTSGSSQTPNEEDDEVQITSVSSSSQPAPPAAAAAASLSLPPPL---L 448 Query: 360 DAQIPVNADLSQRKPPAKATMLPKRDPPPLEGALP 464 IP L ++ PP + L + PPPL P Sbjct: 449 RPAIPCAPTLHRQPPPLQPGRLLQPRPPPLVRPAP 483
>MSH5_YEAST (Q12175) MutS protein homolog 5| Length = 901 Score = 28.5 bits (62), Expect = 8.9 Identities = 12/16 (75%), Positives = 12/16 (75%) Frame = -1 Query: 326 RCADALGFWNSLRSGK 279 RC DA GF N LRSGK Sbjct: 337 RCPDAFGFINQLRSGK 352
>H1_ASCIM (Q9UV33) Histone H1| Length = 213 Score = 28.5 bits (62), Expect = 8.9 Identities = 22/89 (24%), Positives = 32/89 (35%), Gaps = 4/89 (4%) Frame = +3 Query: 210 PPQEEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKSIHAQLDAQIPVNA-- 383 P G ++ + + K A KP A A PK + + K A A Sbjct: 86 PKGPSGTVKLAKKEKAAAAPKKPAAKKAAAPKKDAAPKKAAAPKKAAAPKSAAAKKKLLD 145 Query: 384 --DLSQRKPPAKATMLPKRDPPPLEGALP 464 + +KP AK PK+ P+E P Sbjct: 146 AKKAAAKKPAAKKAAAPKKVAAPVEKPAP 174
>RDRP_PRV (Q3KSM3) RNA-directed RNA polymerase (EC 2.7.7.48) (RdRp) (RNA| replicase) Length = 1014 Score = 28.5 bits (62), Expect = 8.9 Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 10/92 (10%) Frame = +3 Query: 210 PPQEEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKSIH-----AQLDAQIP 374 P ++E A++ + ++ E + +A ++AV K + + + + A++D Q+ Sbjct: 852 PQKDEAAIRAAMAAVLEVDEAQLIAQNEAVLKVNSLDQFPVVFDTYYDHKQLAEVDGQL- 910 Query: 375 VNADL-----SQRKPPAKATMLPKRDPPPLEG 455 V DL +R+P +P PPP G Sbjct: 911 VGTDLHIKEEDERQPETSIDSVPSTGPPPSNG 942
>MAP1A_HUMAN (P78559) Microtubule-associated protein 1A (MAP 1A)| (Proliferation-related protein p80) [Contains: MAP1 light chain LC2] Length = 2805 Score = 28.5 bits (62), Expect = 8.9 Identities = 27/93 (29%), Positives = 34/93 (36%), Gaps = 8/93 (8%) Frame = +3 Query: 210 PPQEEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKSI-HAQLD-------A 365 PP+EE L S I P P Q VP G +PI K + H + + A Sbjct: 1781 PPEEEDKLTRSPFEIISPPASPPEMVGQRVPSAPGQESPIPDPKLMPHMKNEPTTPSWLA 1840 Query: 366 QIPVNADLSQRKPPAKATMLPKRDPPPLEGALP 464 IP + PPA + P P E P Sbjct: 1841 DIPPWVPKDRPLPPAPLSPAPGPPTPAPESHTP 1873
>SMO_HUMAN (Q99835) Smoothened homolog precursor (SMO) (Gx protein)| Length = 787 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/46 (36%), Positives = 26/46 (56%) Frame = +3 Query: 150 LARRLPVTPRELGFTPFRSPPPQEEGALQNSSEGKIQAPELKPLAG 287 +ARR + P+++ TP +P P EE A E +I +PEL+ G Sbjct: 626 VARRGAILPQDISVTPVATPVPPEEQANLWLVEAEI-SPELQKRLG 670
>PEXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precursor (PELP)| Length = 426 Score = 28.5 bits (62), Expect = 8.9 Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 5/96 (5%) Frame = +3 Query: 192 TPFRSPPPQEEGALQNSSEGKIQAPELKPLAGSQA-----VPKTEGVSTPISLVKSIHAQ 356 +P + PPP S Q P +P +A +P V+ P + S Sbjct: 192 SPAKQPPPPPPPVKAPSPSPATQPPTKQPPPPPRAKKSPLLPPPPPVAYPPVMTPSPSPA 251 Query: 357 LDAQIPVNADLSQRKPPAKATMLPKRDPPPLEGALP 464 A+ P+ A PPA ++P+R PP+ LP Sbjct: 252 --AEPPIIAPFPS--PPANPPLIPRRPAPPVVKPLP 283 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,838,521 Number of Sequences: 219361 Number of extensions: 1108305 Number of successful extensions: 3997 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 3733 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3988 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)