ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl25d03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_185137.1| Oryza sativa (japonica cultivar-group), mRNA 262 9e-67
2dbj|AK067902.1| Oryza sativa (japonica cultivar-group) cDNA clon... 262 9e-67
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 133 6e-28
4gb|AC091247.4| Oryza sativa chromosome 3 BAC OJ1111_B11 genomic ... 133 6e-28
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 133 6e-28
6ref|NM_111744.3| Arabidopsis thaliana DEX1 (DEFECTIVE IN EXINE F... 66 1e-07
7gb|AF257187.1|AF257187 Arabidopsis thaliana defective in exine f... 66 1e-07
8gb|BT005785.1| Arabidopsis thaliana clone RAFL15-34-O06 (R50099)... 66 1e-07
9emb|BX824633.1|CNS0A7UY Arabidopsis thaliana Full-length cDNA Co... 60 7e-06
10ref|XM_474423.1| Oryza sativa (japonica cultivar-group), predic... 48 0.025
11emb|AL606686.3|OSJN00084 Oryza sativa genomic DNA, chromosome 4,... 48 0.025
12dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.025
13emb|AL732347.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 48 0.025
14gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 48 0.025
15emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4,... 48 0.025
16emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete ... 46 0.10
17emb|BX640429.1| Bordetella parapertussis strain 12822, complete ... 46 0.10
18gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 46 0.10
19gb|U50602.1|HSU50602 Human Promoter Capture subclone s3-1 44 0.40
20gb|U29488.2| Caenorhabditis elegans cosmid C56C10, complete sequ... 42 1.6
21gb|AC167718.4| Culex pipiens quinquefasciatus, clone Culex pipie... 42 1.6
22ref|NM_193639.1| Oryza sativa (japonica cultivar-group), predic... 42 1.6
23gb|AC118630.8| Mus musculus chromosome 14, clone RP24-92O1, comp... 42 1.6
24gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 1.6
25gb|AC124524.3| Mus musculus BAC clone RP23-402C9 from chromosome... 42 1.6
26gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 42 1.6
27gb|AC167662.6| Culex pipiens quinquefasciatus, clone Culex pipie... 42 1.6
28emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.6
29ref|NM_062939.2| Caenorhabditis elegans DNaJ domain (prokaryotic... 42 1.6
30dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
31gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.6
32dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 42 1.6
33dbj|AP002908.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
34dbj|AP003310.5| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
35gb|AC152987.1| Mus musculus 6 BAC RP23-133N21 (Roswell Park Canc... 40 6.2
36ref|XM_470162.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.2
37ref|XM_477322.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.2
38gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 6.2
39gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 6.2
40gb|BC055100.1| Mus musculus WD repeat and SOCS box-containing 2,... 40 6.2
41gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 6.2
42ref|NM_021539.3| Mus musculus WD repeat and SOCS box-containing ... 40 6.2
43ref|XM_980776.1| PREDICTED: Mus musculus hypothetical protein LO... 40 6.2
44gb|AC110234.11| Mus musculus chromosome 5, clone RP23-76J15, com... 40 6.2
45emb|Z35639.1|CED2045 Caenorhabditis elegans Cosmid D2045, comple... 40 6.2
46gb|AC113299.14| Mus musculus chromosome 5, clone RP23-429P17, co... 40 6.2
47gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genom... 40 6.2
48emb|BX883045.1| Rattus norvegicus chromosome 20, major histocomp... 40 6.2
49emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.2
50emb|BX640424.1| Bordetella parapertussis strain 12822, complete ... 40 6.2
51emb|BX640413.1| Bordetella pertussis strain Tohama I, complete g... 40 6.2
52emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.2
53emb|AJ421477.1|MDI421477 Methylobacterium dichloromethanicum mtd... 40 6.2
54gb|AC092733.18| Homo sapiens chromosome 11, clone RP11-193F22, c... 40 6.2
55gb|AE005983.1| Caulobacter crescentus CB15 section 309 of 359 of... 40 6.2
56gb|AC063949.21| Homo sapiens 12 BAC RP11-693J15 (Roswell Park Ca... 40 6.2
57gb|AC103891.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
58dbj|AK157999.1| Mus musculus adult inner ear cDNA, RIKEN full-le... 40 6.2
59dbj|AK080976.1| Mus musculus 4 days neonate thymus cDNA, RIKEN f... 40 6.2
60ref|NM_001026060.1| Caenorhabditis elegans human ATX (ataxin) re... 40 6.2
61ref|NM_001026059.1| Caenorhabditis elegans human ATX (ataxin) re... 40 6.2
62gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 6.2
63dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
64dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
65dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
66gb|AC158165.1| Mus musculus BAC clone RP23-462M21 from chromosom... 40 6.2
67gb|AY211023.1| Streptomyces violaceoruber strain SANK95570 plasm... 40 6.2
68emb|BX933173.1| Gallus gallus finished cDNA, clone ChEST848h23 40 6.2
69dbj|AP006267.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
70dbj|AP004693.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
71dbj|AP004098.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
72dbj|AP004047.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
73dbj|AP006447.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
74dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
75dbj|AK101289.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
76gb|AY739305.1| Zea mays thiol oxidoreductase (TEL1) mRNA, comple... 40 6.2
77gb|AY571963.1| Caenorhabditis elegans ATX-2 (atx-2) mRNA, comple... 40 6.2
78gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 6.2
79gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 6.2 
>ref|NM_185137.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2834

 Score =  262 bits (132), Expect = 9e-67
 Identities = 183/200 (91%)
 Strand = Plus / Plus

                                                                       
Query: 262 aacaagttccgccagcgcgaggccagcgacgacatgctcggctacccccaccttgatgaa 321
           ||||||||||| ||||||||||||| |||||||||||| || ||||||||||||||||||
Sbjct: 85  aacaagttccggcagcgcgaggccaccgacgacatgcttggatacccccaccttgatgaa 144

                                                                       
Query: 322 gatgcattgttgagtaccaagtgtccaaaacacgtggagctgagatggcagaccgaagtt 381
           ||||| || ||||  ||||||||||||||||| || ||||||||||||||||| ||||||
Sbjct: 145 gatgctttattgaagaccaagtgtccaaaacatgtagagctgagatggcagactgaagtt 204

                                                                       
Query: 382 agttccagcatttatgcaagtccactgattgctgatatcaacagtgatggaaagctggaa 441
           ||||||||||||||||||| |||  |||| |||||||||||||| ||||||||| |||||
Sbjct: 205 agttccagcatttatgcaactccgttgatcgctgatatcaacagcgatggaaagttggaa 264

                               
Query: 442 gtagtggtgccatcatttgt 461
           ||||||||||||||||||||
Sbjct: 265 gtagtggtgccatcatttgt 284
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>dbj|AK067902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121O19, full
           insert sequence
          Length = 3031

 Score =  262 bits (132), Expect = 9e-67
 Identities = 183/200 (91%)
 Strand = Plus / Plus

                                                                       
Query: 262 aacaagttccgccagcgcgaggccagcgacgacatgctcggctacccccaccttgatgaa 321
           ||||||||||| ||||||||||||| |||||||||||| || ||||||||||||||||||
Sbjct: 234 aacaagttccggcagcgcgaggccaccgacgacatgcttggatacccccaccttgatgaa 293

                                                                       
Query: 322 gatgcattgttgagtaccaagtgtccaaaacacgtggagctgagatggcagaccgaagtt 381
           ||||| || ||||  ||||||||||||||||| || ||||||||||||||||| ||||||
Sbjct: 294 gatgctttattgaagaccaagtgtccaaaacatgtagagctgagatggcagactgaagtt 353

                                                                       
Query: 382 agttccagcatttatgcaagtccactgattgctgatatcaacagtgatggaaagctggaa 441
           ||||||||||||||||||| |||  |||| |||||||||||||| ||||||||| |||||
Sbjct: 354 agttccagcatttatgcaactccgttgatcgctgatatcaacagcgatggaaagttggaa 413

                               
Query: 442 gtagtggtgccatcatttgt 461
           ||||||||||||||||||||
Sbjct: 414 gtagtggtgccatcatttgt 433



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 175 cagatgcgtcccctcctcgccctcgc 200
           ||||||||||||||||||||| ||||
Sbjct: 147 cagatgcgtcccctcctcgccttcgc 172
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  133 bits (67), Expect = 6e-28
 Identities = 100/111 (90%)
 Strand = Plus / Plus

                                                                            
Query: 315      tgatgaagatgcattgttgagtaccaagtgtccaaaacacgtggagctgagatggcagac 374
                |||||||||||| || ||||  ||||||||||||||||| || |||||||||||||||||
Sbjct: 34378006 tgatgaagatgctttattgaagaccaagtgtccaaaacatgtagagctgagatggcagac 34378065

                                                                   
Query: 375      cgaagttagttccagcatttatgcaagtccactgattgctgatatcaacag 425
                 ||||||||||||||||||||||||| |||  |||| ||||||||||||||
Sbjct: 34378066 tgaagttagttccagcatttatgcaactccgttgatcgctgatatcaacag 34378116



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                     
Query: 262      aacaagttccgccagcgcgaggccagcgacgacatgctcggctacccccacct 314
                ||||||||||| ||||||||||||| |||||||||||| || |||||||||||
Sbjct: 34376355 aacaagttccggcagcgcgaggccaccgacgacatgcttggatacccccacct 34376407



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                                   
Query: 427      gatggaaagctggaagtagtggtgccatcatttgt 461
                ||||||||| |||||||||||||||||||||||||
Sbjct: 34378526 gatggaaagttggaagtagtggtgccatcatttgt 34378560



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 175      cagatgcgtcccctcctcgccctcgc 200
                ||||||||||||||||||||| ||||
Sbjct: 34376268 cagatgcgtcccctcctcgccttcgc 34376293



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 217      gcggcgggcgcggccgccgcgggggagg 244
                ||||||||||  ||||||||||||||||
Sbjct: 34655373 gcggcgggcggtgccgccgcgggggagg 34655346



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 79      gctcgcccgctcgcccgccg 98
               ||||||||||||||||||||
Sbjct: 7035407 gctcgcccgctcgcccgccg 7035426
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>gb|AC091247.4| Oryza sativa chromosome 3 BAC OJ1111_B11 genomic sequence, complete
             sequence
          Length = 115393

 Score =  133 bits (67), Expect = 6e-28
 Identities = 100/111 (90%)
 Strand = Plus / Minus

                                                                         
Query: 315   tgatgaagatgcattgttgagtaccaagtgtccaaaacacgtggagctgagatggcagac 374
             |||||||||||| || ||||  ||||||||||||||||| || |||||||||||||||||
Sbjct: 71688 tgatgaagatgctttattgaagaccaagtgtccaaaacatgtagagctgagatggcagac 71629

                                                                
Query: 375   cgaagttagttccagcatttatgcaagtccactgattgctgatatcaacag 425
              ||||||||||||||||||||||||| |||  |||| ||||||||||||||
Sbjct: 71628 tgaagttagttccagcatttatgcaactccgttgatcgctgatatcaacag 71578



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                  
Query: 262   aacaagttccgccagcgcgaggccagcgacgacatgctcggctacccccacct 314
             ||||||||||| ||||||||||||| |||||||||||| || |||||||||||
Sbjct: 73339 aacaagttccggcagcgcgaggccaccgacgacatgcttggatacccccacct 73287



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                
Query: 427   gatggaaagctggaagtagtggtgccatcatttgt 461
             ||||||||| |||||||||||||||||||||||||
Sbjct: 71168 gatggaaagttggaagtagtggtgccatcatttgt 71134



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 175   cagatgcgtcccctcctcgccctcgc 200
             ||||||||||||||||||||| ||||
Sbjct: 73426 cagatgcgtcccctcctcgccttcgc 73401
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  133 bits (67), Expect = 6e-28
 Identities = 100/111 (90%)
 Strand = Plus / Plus

                                                                            
Query: 315      tgatgaagatgcattgttgagtaccaagtgtccaaaacacgtggagctgagatggcagac 374
                |||||||||||| || ||||  ||||||||||||||||| || |||||||||||||||||
Sbjct: 34468478 tgatgaagatgctttattgaagaccaagtgtccaaaacatgtagagctgagatggcagac 34468537

                                                                   
Query: 375      cgaagttagttccagcatttatgcaagtccactgattgctgatatcaacag 425
                 ||||||||||||||||||||||||| |||  |||| ||||||||||||||
Sbjct: 34468538 tgaagttagttccagcatttatgcaactccgttgatcgctgatatcaacag 34468588



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                     
Query: 262      aacaagttccgccagcgcgaggccagcgacgacatgctcggctacccccacct 314
                ||||||||||| ||||||||||||| |||||||||||| || |||||||||||
Sbjct: 34466827 aacaagttccggcagcgcgaggccaccgacgacatgcttggatacccccacct 34466879



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                                   
Query: 427      gatggaaagctggaagtagtggtgccatcatttgt 461
                ||||||||| |||||||||||||||||||||||||
Sbjct: 34468998 gatggaaagttggaagtagtggtgccatcatttgt 34469032



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 175      cagatgcgtcccctcctcgccctcgc 200
                ||||||||||||||||||||| ||||
Sbjct: 34466740 cagatgcgtcccctcctcgccttcgc 34466765



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 217      gcggcgggcgcggccgccgcgggggagg 244
                ||||||||||  ||||||||||||||||
Sbjct: 34745445 gcggcgggcggtgccgccgcgggggagg 34745418



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 79      gctcgcccgctcgcccgccg 98
               ||||||||||||||||||||
Sbjct: 7033302 gctcgcccgctcgcccgccg 7033321
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>ref|NM_111744.3| Arabidopsis thaliana DEX1 (DEFECTIVE IN EXINE FORMATION 1)
           AT3G09090 (DEX1) mRNA, complete cds
          Length = 3722

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 111/137 (81%)
 Strand = Plus / Plus

                                                                       
Query: 301 ggctacccccaccttgatgaagatgcattgttgagtaccaagtgtccaaaacacgtggag 360
           ||||||||| |  ||||||||||||| || |||| |||  |||| || ||| |  |||||
Sbjct: 367 ggctaccccgatattgatgaagatgctttattgaatactcagtgcccgaaaaaattggag 426

                                                                       
Query: 361 ctgagatggcagaccgaagttagttccagcatttatgcaagtccactgattgctgatatc 420
           ||| ||||||| || ||||| | ||| ||| ||||||| |  ||  ||||||||||||| 
Sbjct: 427 ctgcgatggcaaactgaagtcacttctagcgtttatgctacacccttgattgctgatatt 486

                            
Query: 421 aacagtgatggaaagct 437
           |||||||||||||||||
Sbjct: 487 aacagtgatggaaagct 503
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>gb|AF257187.1|AF257187 Arabidopsis thaliana defective in exine formation (DEX1) mRNA,
           complete cds
          Length = 3112

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 111/137 (81%)
 Strand = Plus / Plus

                                                                       
Query: 301 ggctacccccaccttgatgaagatgcattgttgagtaccaagtgtccaaaacacgtggag 360
           ||||||||| |  ||||||||||||| || |||| |||  |||| || ||| |  |||||
Sbjct: 367 ggctaccccgatattgatgaagatgctttattgaatactcagtgcccgaaaaaattggag 426

                                                                       
Query: 361 ctgagatggcagaccgaagttagttccagcatttatgcaagtccactgattgctgatatc 420
           ||| ||||||| || ||||| | ||| ||| ||||||| |  ||  ||||||||||||| 
Sbjct: 427 ctgcgatggcaaactgaagtcacttctagcgtttatgctacacccttgattgctgatatt 486

                            
Query: 421 aacagtgatggaaagct 437
           |||||||||||||||||
Sbjct: 487 aacagtgatggaaagct 503
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>gb|BT005785.1| Arabidopsis thaliana clone RAFL15-34-O06 (R50099) unknown protein
           (At3g09090) mRNA, partial cds
          Length = 2893

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 111/137 (81%)
 Strand = Plus / Plus

                                                                       
Query: 301 ggctacccccaccttgatgaagatgcattgttgagtaccaagtgtccaaaacacgtggag 360
           ||||||||| |  ||||||||||||| || |||| |||  |||| || ||| |  |||||
Sbjct: 102 ggctaccccgatattgatgaagatgctttattgaatactcagtgcccgaaaaaattggag 161

                                                                       
Query: 361 ctgagatggcagaccgaagttagttccagcatttatgcaagtccactgattgctgatatc 420
           ||| ||||||| || ||||| | ||| ||| ||||||| |  ||  ||||||||||||| 
Sbjct: 162 ctgcgatggcaaactgaagtcacttctagcgtttatgctacacccttgattgctgatatt 221

                            
Query: 421 aacagtgatggaaagct 437
           |||||||||||||||||
Sbjct: 222 aacagtgatggaaagct 238
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>emb|BX824633.1|CNS0A7UY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH61ZA03 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2946

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 69/82 (84%)
 Strand = Plus / Plus

                                                                       
Query: 356 tggagctgagatggcagaccgaagttagttccagcatttatgcaagtccactgattgctg 415
           |||||||| ||||||| || ||||| | ||| ||| ||||||| |  ||  |||||||||
Sbjct: 296 tggagctgcgatggcaaactgaagtcacttctagcgtttatgctacacccttgattgctg 355

                                 
Query: 416 atatcaacagtgatggaaagct 437
           |||| |||||||||||||||||
Sbjct: 356 atattaacagtgatggaaagct 377
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>ref|XM_474423.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1650

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 211 cttctcgcggcgggcgcggccgccgcgg 238
           |||||||||||||| |||||||||||||
Sbjct: 937 cttctcgcggcgggagcggccgccgcgg 910
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>emb|AL606686.3|OSJN00084 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070M12,
            complete sequence
          Length = 144670

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 211  cttctcgcggcgggcgcggccgccgcgg 238
            |||||||||||||| |||||||||||||
Sbjct: 3833 cttctcgcggcgggagcggccgccgcgg 3860
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 211      cttctcgcggcgggcgcggccgccgcgg 238
                |||||||||||||| |||||||||||||
Sbjct: 35067330 cttctcgcggcgggagcggccgccgcgg 35067357
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>emb|AL732347.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0723C07, complete
             sequence
          Length = 112897

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 211   cttctcgcggcgggcgcggccgccgcgg 238
             |||||||||||||| |||||||||||||
Sbjct: 22063 cttctcgcggcgggagcggccgccgcgg 22090
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 216     cgcggcgggcgcggccgccgcggg 239
               ||||||||||||||||||||||||
Sbjct: 2462257 cgcggcgggcgcggccgccgcggg 2462280



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 215    tcgcggcgggcgcggccgccgc 236
              ||||||||||||||||||||||
Sbjct: 419868 tcgcggcgggcgcggccgccgc 419847



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 216    cgcggcgggcgcggccgccgcg 237
              ||||||||||||||||||||||
Sbjct: 406425 cgcggcgggcgcggccgccgcg 406446



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 217     gcggcgggcgcggccgccgc 236
               ||||||||||||||||||||
Sbjct: 2501000 gcggcgggcgcggccgccgc 2500981
to top
>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09,
              complete sequence
          Length = 145391

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 211    cttctcgcggcgggcgcggccgccgcgg 238
              |||||||||||||| |||||||||||||
Sbjct: 126377 cttctcgcggcgggagcggccgccgcgg 126404
to top
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16
          Length = 348624

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 216    cgcggcgggcgcggccgccgcgg 238
              |||||||||||||||||||||||
Sbjct: 283955 cgcggcgggcgcggccgccgcgg 283933
to top
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14
          Length = 344321

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 216    cgcggcgggcgcggccgccgcgg 238
              |||||||||||||||||||||||
Sbjct: 229443 cgcggcgggcgcggccgccgcgg 229421
to top
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 266    agttccgccagcgcgaggccagc 288
              |||||||||||||||||||||||
Sbjct: 398860 agttccgccagcgcgaggccagc 398838
to top
>gb|U50602.1|HSU50602 Human Promoter Capture subclone s3-1
          Length = 367

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 217 gcggcgggcgcggccgccgcgg 238
           ||||||||||||||||||||||
Sbjct: 275 gcggcgggcgcggccgccgcgg 296
to top
>gb|U29488.2| Caenorhabditis elegans cosmid C56C10, complete sequence
          Length = 35166

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 345   tccaaaacacgtggagctgag 365
             |||||||||||||||||||||
Sbjct: 20715 tccaaaacacgtggagctgag 20695
to top
>gb|AC167718.4| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940130D9, complete sequence
          Length = 117683

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 218   cggcgggcgcggccgccgcgg 238
             |||||||||||||||||||||
Sbjct: 63318 cggcgggcgcggccgccgcgg 63298
to top
>ref|NM_193639.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2070

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 216 cgcggcgggcgcggccgccgcgggggagg 244
           ||||||||||||||| | |||||||||||
Sbjct: 69  cgcggcgggcgcggcgggcgcgggggagg 97
to top
>gb|AC118630.8| Mus musculus chromosome 14, clone RP24-92O1, complete sequence
          Length = 212974

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 395   atgcaagtccactgattgctg 415
             |||||||||||||||||||||
Sbjct: 19670 atgcaagtccactgattgctg 19690
to top
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 217     gcggcgggcgcggccgccgcg 237
               |||||||||||||||||||||
Sbjct: 2455167 gcggcgggcgcggccgccgcg 2455187



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 221     cgggcgcggccgccgcgggg 240
               ||||||||||||||||||||
Sbjct: 2737913 cgggcgcggccgccgcgggg 2737932
to top
>gb|AC124524.3| Mus musculus BAC clone RP23-402C9 from chromosome 14, complete sequence
          Length = 213751

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 395    atgcaagtccactgattgctg 415
              |||||||||||||||||||||
Sbjct: 168578 atgcaagtccactgattgctg 168598
to top
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 215    tcgcggcgggcgcggccgccgcggg 239
              |||||||||| ||||||||||||||
Sbjct: 679150 tcgcggcgggtgcggccgccgcggg 679174
to top
>gb|AC167662.6| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940141D9, complete sequence
          Length = 117679

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 218   cggcgggcgcggccgccgcgg 238
             |||||||||||||||||||||
Sbjct: 54363 cggcgggcgcggccgccgcgg 54383
to top
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 217    gcggcgggcgcggccgccgcg 237
              |||||||||||||||||||||
Sbjct: 635148 gcggcgggcgcggccgccgcg 635168



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 221    cgggcgcggccgccgcgggg 240
              ||||||||||||||||||||
Sbjct: 918403 cgggcgcggccgccgcgggg 918422
to top
>ref|NM_062939.2| Caenorhabditis elegans DNaJ domain (prokaryotic heat shock protein)
            family member (dnj-8) (dnj-8) mRNA, complete cds
          Length = 2750

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 345  tccaaaacacgtggagctgag 365
            |||||||||||||||||||||
Sbjct: 2190 tccaaaacacgtggagctgag 2210
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 216      cgcggcgggcgcggccgccgcgggggagg 244
                ||||||||||||||| | |||||||||||
Sbjct: 22337520 cgcggcgggcgcggcgggcgcgggggagg 22337492
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 82      cgcccgctcgcccgccgggccgaga 106
               |||||||||||||| ||||||||||
Sbjct: 4739168 cgcccgctcgcccggcgggccgaga 4739192



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 224     gcgcggccgccgcgggggagg 244
               |||||||||||||||||||||
Sbjct: 4339446 gcgcggccgccgcgggggagg 4339426



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 220    gcgggcgcggccgccgcgggggagg 244
              |||||||||| ||||||||||||||
Sbjct: 605673 gcgggcgcgggcgccgcgggggagg 605697



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 216     cgcggcgggcgcggccgccgcggg 239
               |||||||||||||| |||||||||
Sbjct: 2086931 cgcggcgggcgcgggcgccgcggg 2086954



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 82      cgcccgctcgcccgccgggc 101
               ||||||||||||||||||||
Sbjct: 1661056 cgcccgctcgcccgccgggc 1661075
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 184    cccctcctcgccctcgccgtg 204
              |||||||||||||||||||||
Sbjct: 987395 cccctcctcgccctcgccgtg 987375



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     cgctcgcccgccgggccgag 105
              ||||||||||||||||||||
Sbjct: 630334 cgctcgcccgccgggccgag 630353
to top
>dbj|AP002908.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0013G02
          Length = 163419

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 216   cgcggcgggcgcggccgccgcgggggagg 244
             ||||||||||||||| | |||||||||||
Sbjct: 34790 cgcggcgggcgcggcgggcgcgggggagg 34762
to top
>dbj|AP003310.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0022F12
          Length = 137716

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 216    cgcggcgggcgcggccgccgcgggggagg 244
              ||||||||||||||| | |||||||||||
Sbjct: 119999 cgcggcgggcgcggcgggcgcgggggagg 119971
to top
>gb|AC152987.1| Mus musculus 6 BAC RP23-133N21 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 196532

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    gctcgcccgctcgcccgccg 98
             ||||||||||||||||||||
Sbjct: 68967 gctcgcccgctcgcccgccg 68986
to top
>ref|XM_470162.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 608

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 217 gcggcgggcgcggccgccgcgggggagg 244
           ||||||||||  ||||||||||||||||
Sbjct: 52  gcggcgggcggtgccgccgcgggggagg 79
to top
>ref|XM_477322.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 816

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 79  gctcgcccgctcgcccgccg 98
           ||||||||||||||||||||
Sbjct: 370 gctcgcccgctcgcccgccg 351
to top
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 216     cgcggcgggcgcggccgccgcggg 239
               ||||||||||||||| ||||||||
Sbjct: 1454671 cgcggcgggcgcggctgccgcggg 1454648
to top
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 214     ctcgcggcgggcgcggccgccgcggggg 241
               ||||||||||||||  ||||||||||||
Sbjct: 1085555 ctcgcggcgggcgcttccgccgcggggg 1085582
to top
>gb|BC055100.1| Mus musculus WD repeat and SOCS box-containing 2, mRNA (cDNA clone
           MGC:58219 IMAGE:6589250), complete cds
          Length = 2439

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 217 gcggcgggcgcggccgccgcgggg 240
           ||||||||||||||||| ||||||
Sbjct: 62  gcggcgggcgcggccgcggcgggg 85
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 216     cgcggcgggcgcggccgccgcggg 239
               ||||||||||||||| ||||||||
Sbjct: 2680819 cgcggcgggcgcggctgccgcggg 2680796
to top
>ref|NM_021539.3| Mus musculus WD repeat and SOCS box-containing 2 (Wsb2), mRNA
          Length = 2439

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 217 gcggcgggcgcggccgccgcgggg 240
           ||||||||||||||||| ||||||
Sbjct: 62  gcggcgggcgcggccgcggcgggg 85
to top
>ref|XM_980776.1| PREDICTED: Mus musculus hypothetical protein LOC665995 (LOC665995),
           mRNA
          Length = 545

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 79  gctcgcccgctcgcccgccg 98
           ||||||||||||||||||||
Sbjct: 351 gctcgcccgctcgcccgccg 332
to top
>gb|AC110234.11| Mus musculus chromosome 5, clone RP23-76J15, complete sequence
          Length = 235276

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 217   gcggcgggcgcggccgccgcgggg 240
             ||||||||||||||||| ||||||
Sbjct: 16948 gcggcgggcgcggccgcggcgggg 16925
to top
>emb|Z35639.1|CED2045 Caenorhabditis elegans Cosmid D2045, complete sequence
          Length = 37249

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    tcctccgagtccgtcctcct 47
             ||||||||||||||||||||
Sbjct: 11272 tcctccgagtccgtcctcct 11253
to top
>gb|AC113299.14| Mus musculus chromosome 5, clone RP23-429P17, complete sequence
          Length = 214124

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 217   gcggcgggcgcggccgccgcgggg 240
             ||||||||||||||||| ||||||
Sbjct: 17693 gcggcgggcgcggccgcggcgggg 17716
to top
>gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genomic sequence, complete
              sequence
          Length = 164236

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 217    gcggcgggcgcggccgccgcgggggagg 244
              ||||||||||  ||||||||||||||||
Sbjct: 113090 gcggcgggcggtgccgccgcgggggagg 113063
to top
>emb|BX883045.1| Rattus norvegicus chromosome 20, major histocompatibility complex,
              assembled from 40 BACs, strain Brown Norway (BN/ssNHsd),
              RT1n haplotype; segment 4/11
          Length = 346406

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 152    ggacccctaggctcctctgg 171
              ||||||||||||||||||||
Sbjct: 115940 ggacccctaggctcctctgg 115921
to top
>emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete genome; segment 2/16
          Length = 347786

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 216    cgcggcgggcgcggccgccg 235
              ||||||||||||||||||||
Sbjct: 214349 cgcggcgggcgcggccgccg 214368
to top
>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment 2/14
          Length = 349146

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 216    cgcggcgggcgcggccgccg 235
              ||||||||||||||||||||
Sbjct: 212556 cgcggcgggcgcggccgccg 212575
to top
>emb|BX640413.1| Bordetella pertussis strain Tohama I, complete genome; segment 3/12
          Length = 349028

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 216    cgcggcgggcgcggccgccg 235
              ||||||||||||||||||||
Sbjct: 227083 cgcggcgggcgcggccgccg 227064
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 216     cgcggcgggcgcggccgccgcggg 239
               ||||||||||||||| ||||||||
Sbjct: 1702652 cgcggcgggcgcggctgccgcggg 1702675
to top
>emb|AJ421477.1|MDI421477 Methylobacterium dichloromethanicum mtdB gene, mchA gene, fae gene
            for Hypothetical protein, fae gene and ORF1-5, strain DM4
            (DSM6343)
          Length = 7038

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 120  tcgccgccgcctcgtcgcgaccgc 143
            ||||||||||||||||||| ||||
Sbjct: 1592 tcgccgccgcctcgtcgcggccgc 1569
to top
>gb|AC092733.18| Homo sapiens chromosome 11, clone RP11-193F22, complete sequence
          Length = 195538

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 182    gtcccctcctcgccctcgcc 201
              ||||||||||||||||||||
Sbjct: 152085 gtcccctcctcgccctcgcc 152066
to top
>gb|AE005983.1| Caulobacter crescentus CB15 section 309 of 359 of the complete genome
          Length = 13041

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   ggcgggcgcggccgccgcgg 238
             ||||||||||||||||||||
Sbjct: 12292 ggcgggcgcggccgccgcgg 12273
to top
>gb|AC063949.21| Homo sapiens 12 BAC RP11-693J15 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 172984

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   tgaagatgcattgttgagta 337
             ||||||||||||||||||||
Sbjct: 65252 tgaagatgcattgttgagta 65271
to top
>gb|AC103891.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1175C11,
             complete sequence
          Length = 123620

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    gctcgcccgctcgcccgccg 98
             ||||||||||||||||||||
Sbjct: 46958 gctcgcccgctcgcccgccg 46939
to top
>dbj|AK157999.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched
           library, clone:F930015G07 product:WD repeat and SOCS
           box-containing 2, full insert sequence
          Length = 1565

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 217 gcggcgggcgcggccgccgcgggg 240
           ||||||||||||||||| ||||||
Sbjct: 21  gcggcgggcgcggccgcggcgggg 44
to top
>dbj|AK080976.1| Mus musculus 4 days neonate thymus cDNA, RIKEN full-length enriched
           library, clone:B630006D22 product:WSB-2 protein, full
           insert sequence
          Length = 3358

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 217 gcggcgggcgcggccgccgcgggg 240
           ||||||||||||||||| ||||||
Sbjct: 63  gcggcgggcgcggccgcggcgggg 86
to top
>ref|NM_001026060.1| Caenorhabditis elegans human ATX (ataxin) related family member
           (atx-2) (atx-2) mRNA, complete cds
          Length = 3612

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 28  tcctccgagtccgtcctcct 47
           ||||||||||||||||||||
Sbjct: 490 tcctccgagtccgtcctcct 471
to top
>ref|NM_001026059.1| Caenorhabditis elegans human ATX (ataxin) related family member
           (atx-2) (atx-2) mRNA, complete cds
          Length = 3612

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 28  tcctccgagtccgtcctcct 47
           ||||||||||||||||||||
Sbjct: 490 tcctccgagtccgtcctcct 471
to top
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 221     cgggcgcggccgccgcgggg 240
               ||||||||||||||||||||
Sbjct: 1210871 cgggcgcggccgccgcgggg 1210852
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 184      cccctcctcgccctcgccgt 203
                ||||||||||||||||||||
Sbjct: 23078799 cccctcctcgccctcgccgt 23078818
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 79      gctcgcccgctcgcccgccg 98
               ||||||||||||||||||||
Sbjct: 9443786 gctcgcccgctcgcccgccg 9443767
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 77       cggctcgcccgctcgcccgc 96
                ||||||||||||||||||||
Sbjct: 29774461 cggctcgcccgctcgcccgc 29774442
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>gb|AC158165.1| Mus musculus BAC clone RP23-462M21 from chromosome 6, complete sequence
          Length = 179032

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 378    agttagttccagcatttatg 397
              ||||||||||||||||||||
Sbjct: 107958 agttagttccagcatttatg 107939
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>gb|AY211023.1| Streptomyces violaceoruber strain SANK95570 plasmid pSV2, complete
             sequence
          Length = 96742

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 214   ctcgcggcgggcgcggccgc 233
             ||||||||||||||||||||
Sbjct: 50914 ctcgcggcgggcgcggccgc 50933
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>emb|BX933173.1| Gallus gallus finished cDNA, clone ChEST848h23
          Length = 1124

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 75 cccggctcgcccgctcgcccgccg 98
          |||||||||||||| |||||||||
Sbjct: 5  cccggctcgcccgcccgcccgccg 28
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>dbj|AP006267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0004F07
          Length = 135890

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     gctcgcccgctcgcccgccg 98
              ||||||||||||||||||||
Sbjct: 114654 gctcgcccgctcgcccgccg 114635
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>dbj|AP004693.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0461F06
          Length = 147891

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 184  cccctcctcgccctcgccgt 203
            ||||||||||||||||||||
Sbjct: 1898 cccctcctcgccctcgccgt 1917
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>dbj|AP004098.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ2056_H01
          Length = 123428

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    cggctcgcccgctcgcccgc 96
             ||||||||||||||||||||
Sbjct: 30806 cggctcgcccgctcgcccgc 30787
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>dbj|AP004047.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1191_G08
          Length = 172832

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     cggctcgcccgctcgcccgc 96
              ||||||||||||||||||||
Sbjct: 143440 cggctcgcccgctcgcccgc 143421
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>dbj|AP006447.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1100H02
          Length = 128773

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    gctcgcccgctcgcccgccg 98
             ||||||||||||||||||||
Sbjct: 25772 gctcgcccgctcgcccgccg 25753
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>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0470B03
          Length = 163371

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 184    cccctcctcgccctcgccgt 203
              ||||||||||||||||||||
Sbjct: 138527 cccctcctcgccctcgccgt 138546
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>dbj|AK101289.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033G01, full
           insert sequence
          Length = 685

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 217 gcggcgggcgcggccgccgcgggggagg 244
           ||||||||||  ||||||||||||||||
Sbjct: 129 gcggcgggcggtgccgccgcgggggagg 156
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>gb|AY739305.1| Zea mays thiol oxidoreductase (TEL1) mRNA, complete cds
          Length = 2018

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 180 gcgtcccctcctcgccctcgccgt 203
           ||||| ||||||||||||||||||
Sbjct: 187 gcgtctcctcctcgccctcgccgt 210
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>gb|AY571963.1| Caenorhabditis elegans ATX-2 (atx-2) mRNA, complete cds
          Length = 3634

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 28  tcctccgagtccgtcctcct 47
           ||||||||||||||||||||
Sbjct: 512 tcctccgagtccgtcctcct 493
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 216     cgcggcgggcgcggccgccgcggg 239
               ||||||||||||||||| ||||||
Sbjct: 2012419 cgcggcgggcgcggccggcgcggg 2012442
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     cgctcgcccgccgggccgag 105
              ||||||||||||||||||||
Sbjct: 292495 cgctcgcccgccgggccgag 292514


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,628,067
Number of Sequences: 3902068
Number of extensions: 3628067
Number of successful extensions: 96202
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91473
Number of HSP's gapped (non-prelim): 4722
length of query: 461
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 439
effective length of database: 17,147,199,772
effective search space: 7527620699908
effective search space used: 7527620699908
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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