ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bastl25c03 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Z11889.1|MITTARRNG T.aestivum mitochondrion rrn26 gene for rRNA large subunit (26S) Length = 7242 Score = 825 bits (416), Expect = 0.0 Identities = 430/435 (98%) Strand = Plus / Plus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2826 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 2885 Query: 64 gagatatgaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 123 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2886 gagagatttttctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 2945 Query: 124 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2946 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 3005 Query: 184 aaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttca 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3006 aaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttca 3065 Query: 244 tcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3066 tcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacca 3125 Query: 304 gcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3126 gcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagt 3185 Query: 364 cagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggngtggggcgcg 423 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 3186 cagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcg 3245 Query: 424 cagtgaactggtttt 438 ||||||||||||||| Sbjct: 3246 cagtgaactggtttt 3260
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 825 bits (416), Expect = 0.0 Identities = 430/435 (98%) Strand = Plus / Minus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 374681 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 374622 Query: 64 gagatatgaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 123 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 374621 gagagatttttctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 374562 Query: 124 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 374561 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 374502 Query: 184 aaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttca 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 374501 aaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttca 374442 Query: 244 tcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 374441 tcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacca 374382 Query: 304 gcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 374381 gcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagt 374322 Query: 364 cagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggngtggggcgcg 423 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 374321 cagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcg 374262 Query: 424 cagtgaactggtttt 438 ||||||||||||||| Sbjct: 374261 cagtgaactggtttt 374247 Score = 825 bits (416), Expect = 0.0 Identities = 430/435 (98%) Strand = Plus / Minus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262943 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 262884 Query: 64 gagatatgaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 123 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262883 gagagatttttctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 262824 Query: 124 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262823 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 262764 Query: 184 aaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttca 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262763 aaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttca 262704 Query: 244 tcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262703 tcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacca 262644 Query: 304 gcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262643 gcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagt 262584 Query: 364 cagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggngtggggcgcg 423 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 262583 cagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcg 262524 Query: 424 cagtgaactggtttt 438 ||||||||||||||| Sbjct: 262523 cagtgaactggtttt 262509 Score = 785 bits (396), Expect = 0.0 Identities = 410/415 (98%) Strand = Plus / Minus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 171046 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 170987 Query: 64 gagatatgaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 123 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170986 gagagatttttctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 170927 Query: 124 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170926 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 170867 Query: 184 aaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttca 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170866 aaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttca 170807 Query: 244 tcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170806 tcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacca 170747 Query: 304 gcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170746 gcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagt 170687 Query: 364 cagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggngtggg 418 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 170686 cagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggggtggg 170632
>gb|M37274.1|WHTMT26SRR Wheat mitochondrial 26S rRNA gene, complete cds Length = 4103 Score = 825 bits (416), Expect = 0.0 Identities = 430/435 (98%) Strand = Plus / Plus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 491 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 550 Query: 64 gagatatgaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 123 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 551 gagagatttttctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 610 Query: 124 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 611 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 670 Query: 184 aaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttca 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 671 aaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttca 730 Query: 244 tcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 731 tcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacca 790 Query: 304 gcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 791 gcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagt 850 Query: 364 cagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggngtggggcgcg 423 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 851 cagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcg 910 Query: 424 cagtgaactggtttt 438 ||||||||||||||| Sbjct: 911 cagtgaactggtttt 925
>gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-11 mitochondrion, complete genome Length = 491515 Score = 751 bits (379), Expect = 0.0 Identities = 423/436 (97%), Gaps = 4/436 (0%) Strand = Plus / Plus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462207 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 462266 Query: 64 gagatat-gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 122 |||| | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462267 gagagagagcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 462326 Query: 123 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462327 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 462386 Query: 183 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462387 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 462446 Query: 243 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462447 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 462506 Query: 303 agcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaag 362 |||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 462507 agcaagcagcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaag 462563 Query: 363 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggngtggggcgc 422 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 462564 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgc 462623 Query: 423 gcagtgaactggtttt 438 |||||||||||||||| Sbjct: 462624 gcagtgaactggtttt 462639 Score = 751 bits (379), Expect = 0.0 Identities = 423/436 (97%), Gaps = 4/436 (0%) Strand = Plus / Plus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381094 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 381153 Query: 64 gagatat-gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 122 |||| | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381154 gagagagagcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 381213 Query: 123 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381214 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 381273 Query: 183 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381274 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 381333 Query: 243 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381334 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 381393 Query: 303 agcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaag 362 |||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 381394 agcaagcagcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaag 381450 Query: 363 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggngtggggcgc 422 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 381451 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgc 381510 Query: 423 gcagtgaactggtttt 438 |||||||||||||||| Sbjct: 381511 gcagtgaactggtttt 381526 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Minus Query: 13 atgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggaga 67 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236839 atgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggaga 236785
>gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA64S mitochondrion, complete genome Length = 490673 Score = 751 bits (379), Expect = 0.0 Identities = 423/436 (97%), Gaps = 4/436 (0%) Strand = Plus / Plus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461365 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 461424 Query: 64 gagatat-gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 122 |||| | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461425 gagagagagcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 461484 Query: 123 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461485 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 461544 Query: 183 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461545 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 461604 Query: 243 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461605 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 461664 Query: 303 agcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaag 362 |||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 461665 agcaagcagcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaag 461721 Query: 363 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggngtggggcgc 422 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 461722 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgc 461781 Query: 423 gcagtgaactggtttt 438 |||||||||||||||| Sbjct: 461782 gcagtgaactggtttt 461797 Score = 751 bits (379), Expect = 0.0 Identities = 423/436 (97%), Gaps = 4/436 (0%) Strand = Plus / Plus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380267 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 380326 Query: 64 gagatat-gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 122 |||| | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380327 gagagagagcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 380386 Query: 123 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380387 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 380446 Query: 183 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380447 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 380506 Query: 243 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380507 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 380566 Query: 303 agcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaag 362 |||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 380567 agcaagcagcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaag 380623 Query: 363 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggngtggggcgc 422 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 380624 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgc 380683 Query: 423 gcagtgaactggtttt 438 |||||||||||||||| Sbjct: 380684 gcagtgaactggtttt 380699 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Minus Query: 13 atgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggaga 67 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236012 atgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggaga 235958
>gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare mitochondrion, complete genome Length = 490669 Score = 751 bits (379), Expect = 0.0 Identities = 423/436 (97%), Gaps = 4/436 (0%) Strand = Plus / Plus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461361 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 461420 Query: 64 gagatat-gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 122 |||| | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461421 gagagagagcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 461480 Query: 123 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461481 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 461540 Query: 183 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461541 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 461600 Query: 243 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461601 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 461660 Query: 303 agcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaag 362 |||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 461661 agcaagcagcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaag 461717 Query: 363 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggngtggggcgc 422 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 461718 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgc 461777 Query: 423 gcagtgaactggtttt 438 |||||||||||||||| Sbjct: 461778 gcagtgaactggtttt 461793 Score = 751 bits (379), Expect = 0.0 Identities = 423/436 (97%), Gaps = 4/436 (0%) Strand = Plus / Plus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380263 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 380322 Query: 64 gagatat-gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 122 |||| | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380323 gagagagagcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 380382 Query: 123 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380383 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 380442 Query: 183 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380443 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 380502 Query: 243 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380503 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 380562 Query: 303 agcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaag 362 |||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 380563 agcaagcagcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaag 380619 Query: 363 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggngtggggcgc 422 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 380620 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgc 380679 Query: 423 gcagtgaactggtttt 438 |||||||||||||||| Sbjct: 380680 gcagtgaactggtttt 380695 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Minus Query: 13 atgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggaga 67 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236009 atgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggaga 235955
>dbj|AK119622.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-H07, full insert sequence Length = 2258 Score = 751 bits (379), Expect = 0.0 Identities = 423/436 (97%), Gaps = 4/436 (0%) Strand = Plus / Plus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 66 Query: 64 gagatat-gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 122 |||| | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67 gagagagagcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 126 Query: 123 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 186 Query: 183 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 246 Query: 243 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 306 Query: 303 agcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaag 362 |||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 307 agcaagcagcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaag 363 Query: 363 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggngtggggcgc 422 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 364 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgc 423 Query: 423 gcagtgaactggtttt 438 |||||||||||||||| Sbjct: 424 gcagtgaactggtttt 439
>dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete genome Length = 490520 Score = 751 bits (379), Expect = 0.0 Identities = 423/436 (97%), Gaps = 4/436 (0%) Strand = Plus / Plus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461212 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 461271 Query: 64 gagatat-gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 122 |||| | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461272 gagagagagcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 461331 Query: 123 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461332 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 461391 Query: 183 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461392 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 461451 Query: 243 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461452 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 461511 Query: 303 agcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaag 362 |||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 461512 agcaagcagcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaag 461568 Query: 363 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggngtggggcgc 422 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 461569 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgc 461628 Query: 423 gcagtgaactggtttt 438 |||||||||||||||| Sbjct: 461629 gcagtgaactggtttt 461644 Score = 751 bits (379), Expect = 0.0 Identities = 423/436 (97%), Gaps = 4/436 (0%) Strand = Plus / Plus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380125 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 380184 Query: 64 gagatat-gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 122 |||| | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380185 gagagagagcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 380244 Query: 123 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380245 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 380304 Query: 183 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380305 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 380364 Query: 243 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380365 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 380424 Query: 303 agcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaag 362 |||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 380425 agcaagcagcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaag 380481 Query: 363 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggngtggggcgc 422 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 380482 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgc 380541 Query: 423 gcagtgaactggtttt 438 |||||||||||||||| Sbjct: 380542 gcagtgaactggtttt 380557 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Minus Query: 13 atgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggaga 67 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 235888 atgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggaga 235834
>dbj|AK108762.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-G07, full insert sequence Length = 1619 Score = 749 bits (378), Expect = 0.0 Identities = 422/435 (97%), Gaps = 4/435 (0%) Strand = Plus / Plus Query: 5 ttggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatgggg 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatgggg 60 Query: 65 agatat-gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 123 ||| | | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agagagagcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 120 Query: 124 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 180 Query: 184 aaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttca 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttca 240 Query: 244 tcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacca 300 Query: 304 gcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagt 363 ||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 301 gcaagcagcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaagt 357 Query: 364 cagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggngtggggcgcg 423 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 358 cagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcg 417 Query: 424 cagtgaactggtttt 438 ||||||||||||||| Sbjct: 418 cagtgaactggtttt 432
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 735 bits (371), Expect = 0.0 Identities = 421/436 (96%), Gaps = 4/436 (0%) Strand = Plus / Plus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33538002 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 33538061 Query: 64 gagatat-gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 122 |||| | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33538062 gagagagagcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 33538121 Query: 123 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33538122 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 33538181 Query: 183 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 242 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 33538182 gaaggaaaatcaaccgagaccccgttagtagcagcgagcgagagcggaacaagggttttc 33538241 Query: 243 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33538242 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 33538301 Query: 303 agcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaag 362 |||||||||||||||||| | |||||||||| ||||||||||||||||||||||| Sbjct: 33538302 agcaagcagcaagcgtag---gctgtgttgccgtagtgcgccctacggagttgtacaaag 33538358 Query: 363 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggngtggggcgc 422 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 33538359 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgc 33538418 Query: 423 gcagtgaactggtttt 438 |||||||||||||||| Sbjct: 33538419 gcagtgaactggtttt 33538434 Score = 640 bits (323), Expect = 0.0 Identities = 354/364 (97%), Gaps = 3/364 (0%) Strand = Plus / Plus Query: 75 ctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgct 134 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33499442 ctgtgatcattggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgct 33499501 Query: 135 ctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatca 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33499502 ctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatca 33499561 Query: 195 accgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaagaaat 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33499562 accgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaagaaat 33499621 Query: 255 ccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaa 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33499622 ccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaa 33499681 Query: 315 gcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaaccgtt 374 |||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33499682 gcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaagtcagcaaccgtt 33499738 Query: 375 ttggggcgcaagcataggcaacacaggactgatgacggngtggggcgcgcagtgaactgg 434 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 33499739 ttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtgaactgg 33499798 Query: 435 tttt 438 |||| Sbjct: 33499799 tttt 33499802 Score = 97.6 bits (49), Expect = 3e-17 Identities = 52/53 (98%) Strand = Plus / Plus Query: 119 gtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctg 171 ||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 34366158 gtggctagtctgcgctctttggacttttcaaacttagcgaactaaaacatctg 34366210
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 735 bits (371), Expect = 0.0 Identities = 421/436 (96%), Gaps = 4/436 (0%) Strand = Plus / Plus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83199 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 83258 Query: 64 gagatat-gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 122 |||| | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83259 gagagagagcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 83318 Query: 123 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83319 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 83378 Query: 183 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 242 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 83379 gaaggaaaatcaaccgagaccccgttagtagcagcgagcgagagcggaacaagggttttc 83438 Query: 243 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83439 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 83498 Query: 303 agcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaag 362 |||||||||||||||||| | |||||||||| ||||||||||||||||||||||| Sbjct: 83499 agcaagcagcaagcgtag---gctgtgttgccgtagtgcgccctacggagttgtacaaag 83555 Query: 363 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggngtggggcgc 422 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 83556 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggggtggggcgc 83615 Query: 423 gcagtgaactggtttt 438 |||||||||||||||| Sbjct: 83616 gcagtgaactggtttt 83631 Score = 640 bits (323), Expect = 0.0 Identities = 354/364 (97%), Gaps = 3/364 (0%) Strand = Plus / Plus Query: 75 ctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgct 134 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44639 ctgtgatcattggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgct 44698 Query: 135 ctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatca 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44699 ctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatca 44758 Query: 195 accgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaagaaat 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44759 accgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaagaaat 44818 Query: 255 ccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaa 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44819 ccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaa 44878 Query: 315 gcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaaccgtt 374 |||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44879 gcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaagtcagcaaccgtt 44935 Query: 375 ttggggcgcaagcataggcaacacaggactgatgacggngtggggcgcgcagtgaactgg 434 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 44936 ttggggcgcaagcataggcaacacaggactgatgacggggtggggcgcgcagtgaactgg 44995 Query: 435 tttt 438 |||| Sbjct: 44996 tttt 44999
>gb|AC074105.3| Oryza sativa chromosome 10 clone OSJNBa0030B02, complete sequence Length = 146836 Score = 704 bits (355), Expect = 0.0 Identities = 417/436 (95%), Gaps = 4/436 (0%) Strand = Plus / Minus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 64019 attggatggatgcccgggcatttagaaggaaggacgctttcagaggtgaaaggccatggg 63960 Query: 64 gagatat-gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 122 |||| | | ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63959 gagagagagcatccgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 63900 Query: 123 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 182 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 63899 ctagtctgcgctctttggacttttcaaacttagcgaactaaaacatctgagtagctaaag 63840 Query: 183 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63839 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 63780 Query: 243 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 302 ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 63779 atcaaaagaaatccggagcagtttcattcgatttgttgtggattggatgatggaaaaact 63720 Query: 303 agcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaag 362 |||||||||||||||||| | | |||||||||||||||||||||||||||||||||| Sbjct: 63719 agcaagcagcaagcgtag---gctatgttgccgtagcgcgccctacggagttgtacaaag 63663 Query: 363 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggngtggggcgc 422 ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 63662 tcagcaaccattttggggcgcaagcataggcaacacaggactgatgacggggtggggcgc 63603 Query: 423 gcagtgaactggtttt 438 |||||||||||||||| Sbjct: 63602 gcagtgaactggtttt 63587
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 704 bits (355), Expect = 0.0 Identities = 417/436 (95%), Gaps = 4/436 (0%) Strand = Plus / Minus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 2737243 attggatggatgcccgggcatttagaaggaaggacgctttcagaggtgaaaggccatggg 2737184 Query: 64 gagatat-gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 122 |||| | | ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2737183 gagagagagcatccgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 2737124 Query: 123 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 182 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2737123 ctagtctgcgctctttggacttttcaaacttagcgaactaaaacatctgagtagctaaag 2737064 Query: 183 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2737063 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 2737004 Query: 243 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 302 ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2737003 atcaaaagaaatccggagcagtttcattcgatttgttgtggattggatgatggaaaaact 2736944 Query: 303 agcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaag 362 |||||||||||||||||| | | |||||||||||||||||||||||||||||||||| Sbjct: 2736943 agcaagcagcaagcgtag---gctatgttgccgtagcgcgccctacggagttgtacaaag 2736887 Query: 363 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggngtggggcgc 422 ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2736886 tcagcaaccattttggggcgcaagcataggcaacacaggactgatgacggggtggggcgc 2736827 Query: 423 gcagtgaactggtttt 438 |||||||||||||||| Sbjct: 2736826 gcagtgaactggtttt 2736811
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 704 bits (355), Expect = 0.0 Identities = 417/436 (95%), Gaps = 4/436 (0%) Strand = Plus / Minus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 2737194 attggatggatgcccgggcatttagaaggaaggacgctttcagaggtgaaaggccatggg 2737135 Query: 64 gagatat-gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 122 |||| | | ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2737134 gagagagagcatccgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 2737075 Query: 123 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 182 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2737074 ctagtctgcgctctttggacttttcaaacttagcgaactaaaacatctgagtagctaaag 2737015 Query: 183 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2737014 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 2736955 Query: 243 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 302 ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2736954 atcaaaagaaatccggagcagtttcattcgatttgttgtggattggatgatggaaaaact 2736895 Query: 303 agcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaag 362 |||||||||||||||||| | | |||||||||||||||||||||||||||||||||| Sbjct: 2736894 agcaagcagcaagcgtag---gctatgttgccgtagcgcgccctacggagttgtacaaag 2736838 Query: 363 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggngtggggcgc 422 ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2736837 tcagcaaccattttggggcgcaagcataggcaacacaggactgatgacggggtggggcgc 2736778 Query: 423 gcagtgaactggtttt 438 |||||||||||||||| Sbjct: 2736777 gcagtgaactggtttt 2736762
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 654 bits (330), Expect = 0.0 Identities = 410/436 (94%), Gaps = 17/436 (3%) Strand = Plus / Plus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400241 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 400300 Query: 64 gagatat-gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 122 |||| | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400301 gagagagagcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 400360 Query: 123 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400361 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 400420 Query: 183 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400421 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 400480 Query: 243 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400481 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 400540 Query: 303 agcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaag 362 |||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 400541 agcaagcagcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaag 400597 Query: 363 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggngtggggcgc 422 |||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 400598 tcagca------ttggggcgcaagcataggcaacacag-------gacggggtggggcgc 400644 Query: 423 gcagtgaactggtttt 438 |||||||||||||||| Sbjct: 400645 gcagtgaactggtttt 400660
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 654 bits (330), Expect = 0.0 Identities = 410/436 (94%), Gaps = 17/436 (3%) Strand = Plus / Minus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284178 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 284119 Query: 64 gagatat-gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 122 |||| | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284118 gagagagagcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 284059 Query: 123 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284058 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 283999 Query: 183 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 283998 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 283939 Query: 243 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 283938 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 283879 Query: 303 agcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaag 362 |||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 283878 agcaagcagcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaag 283822 Query: 363 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggngtggggcgc 422 |||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 283821 tcagca------ttggggcgcaagcataggcaacacag-------gacggggtggggcgc 283775 Query: 423 gcagtgaactggtttt 438 |||||||||||||||| Sbjct: 283774 gcagtgaactggtttt 283759 Score = 654 bits (330), Expect = 0.0 Identities = 410/436 (94%), Gaps = 17/436 (3%) Strand = Plus / Minus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 155486 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 155427 Query: 64 gagatat-gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 122 |||| | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 155426 gagagagagcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 155367 Query: 123 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 155366 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 155307 Query: 183 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 155306 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 155247 Query: 243 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 155246 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 155187 Query: 303 agcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaag 362 |||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 155186 agcaagcagcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaag 155130 Query: 363 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggngtggggcgc 422 |||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 155129 tcagca------ttggggcgcaagcataggcaacacag-------gacggggtggggcgc 155083 Query: 423 gcagtgaactggtttt 438 |||||||||||||||| Sbjct: 155082 gcagtgaactggtttt 155067
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 654 bits (330), Expect = 0.0 Identities = 410/436 (94%), Gaps = 17/436 (3%) Strand = Plus / Plus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 292875 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 292934 Query: 64 gagatat-gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 122 |||| | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 292935 gagagagagcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 292994 Query: 123 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 292995 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 293054 Query: 183 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 293055 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 293114 Query: 243 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 293115 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 293174 Query: 303 agcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaag 362 |||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 293175 agcaagcagcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaag 293231 Query: 363 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggngtggggcgc 422 |||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 293232 tcagca------ttggggcgcaagcataggcaacacag-------gacggggtggggcgc 293278 Query: 423 gcagtgaactggtttt 438 |||||||||||||||| Sbjct: 293279 gcagtgaactggtttt 293294
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 654 bits (330), Expect = 0.0 Identities = 410/436 (94%), Gaps = 17/436 (3%) Strand = Plus / Plus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265710 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 265769 Query: 64 gagatat-gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 122 |||| | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265770 gagagagagcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 265829 Query: 123 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265830 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 265889 Query: 183 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265890 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 265949 Query: 243 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265950 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 266009 Query: 303 agcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaag 362 |||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 266010 agcaagcagcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaag 266066 Query: 363 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggngtggggcgc 422 |||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 266067 tcagca------ttggggcgcaagcataggcaacacag-------gacggggtggggcgc 266113 Query: 423 gcagtgaactggtttt 438 |||||||||||||||| Sbjct: 266114 gcagtgaactggtttt 266129
>gb|K01868.1|MZEMTRG26 Maize mitochondrial 26S rRNA gene and flanks Length = 5218 Score = 638 bits (322), Expect = e-180 Identities = 409/436 (93%), Gaps = 18/436 (4%) Strand = Plus / Plus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 514 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 573 Query: 64 gagatat-gaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 122 |||| | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 gagagagagcgtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtgg 633 Query: 123 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 634 ctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaag 693 Query: 183 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 694 gaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttc 753 Query: 243 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 atcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacc 813 Query: 303 agcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaag 362 |||||||||||||||||| | |||||||||||||| ||||||||||||||||||| Sbjct: 814 agcaagcagcaagcgtag---gctgtgttgccgtagcgcg-cctacggagttgtacaaag 869 Query: 363 tcagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggngtggggcgc 422 |||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 870 tcagca------ttggggcgcaagcataggcaacacag-------gacggggtggggcgc 916 Query: 423 gcagtgaactggtttt 438 |||||||||||||||| Sbjct: 917 gcagtgaactggtttt 932
>gb|BT016713.1| Zea mays clone Contig546 mRNA sequence Length = 1257 Score = 595 bits (300), Expect = e-167 Identities = 380/406 (93%), Gaps = 17/406 (4%) Strand = Plus / Plus Query: 34 aggacgctttcagaggcgaaaggccatggggagatat-gaatctgtgatccatggatctc 92 |||||||||||||||||||||||||||||||||| | | ||||||||||||||||||| Sbjct: 9 aggacgctttcagaggcgaaaggccatggggagagagagcgtctgtgatccatggatctc 68 Query: 93 cgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaact 152 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69 cgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaact 128 Query: 153 tagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagta 212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 tagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagta 188 Query: 213 gcggcgagcgagagcggaacaagggttttcatcaaaagaaatccgaagcggtttcattcg 272 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 gcggcgagcgagagcggaacaagggttttcatcaaaagaaatccgaagcggtttcattcg 248 Query: 273 atttgttgtggattggatgatggaaaaaccagcaagcagcaagcgtagttagaaaagttg 332 |||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 249 atttgttgtggattggatgatggaaaaaccagcaagcagcaagcgtag---gctgtgttg 305 Query: 333 ccgtagcgcgccctacggagttgtacaaagtcagcaaccgttttggggcgcaagcatagg 392 |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 306 ccgtagcgcgccctacggagttgtacaaagtcagca------ttggggcgcaagcatagg 359 Query: 393 caacacaggactgatgacggngtggggcgcgcagtgaactggtttt 438 |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 360 caacacag-------gacggggtggggcgcgcagtgaactggtttt 398
>gb|DQ008806.1| Dioscorea sp. Qiu 94044 large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3174 Score = 547 bits (276), Expect = e-152 Identities = 364/391 (93%), Gaps = 7/391 (1%) Strand = Plus / Plus Query: 49 gcgaaaggccatggggagatat-gaatctgtgatccatggatctccgatcgggaaaccgt 107 ||||||||||||||||||| | | |||||||||||||||||||||||||||||||||| Sbjct: 1 gcgaaaggccatggggagagagagcgtctgtgatccatggatctccgatcgggaaaccgt 60 Query: 108 atccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaaca 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 atccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaaca 120 Query: 168 tctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagc 227 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tcttagtagctaaaggaaagaaaatcaaccgagaccccgttagtagcggcgagcgagagc 180 Query: 228 ggaacaagggttttcatcaaaagaaatccgaagcggtttcattcgatttgttgtggattg 287 ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 181 ggaacaagggtttgaatcaaaagaaatccgaagcgctttcattcgatttgttgtggattg 240 Query: 288 gatgatggaaaaaccagcaagcagcaagcgtagttagaaaagttgccgtagcgcgcccta 347 ||||||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 241 gatgatggaaaaaccagcaagcagcaagcgtag---gctgtgttgccgtagcgcgcccgg 297 Query: 348 cggagttgtacaaagtcagcaaccgttttggggcgcaagcataggcaacacaggactgat 407 || ||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct: 298 atgacttgtacaaagtcagcaaccgttttggggcgcaagcgtaggcaacacaggac---t 354 Query: 408 gacggngtggggcgcgcagtgaactggtttt 438 ||||| ||||||||||||||||||||||||| Sbjct: 355 gacggggtggggcgcgcagtgaactggtttt 385
>gb|DQ008807.1| Asparagus officinalis large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3153 Score = 543 bits (274), Expect = e-151 Identities = 371/401 (92%), Gaps = 7/401 (1%) Strand = Plus / Plus Query: 39 gctttcagaggcgaaaggccatggggagatat-gaatctgtgatccatggatctccgatc 97 ||||||||||||||||||||||||||||| | | |||||||||||||||||||||||| Sbjct: 13 gctttcagaggcgaaaggccatggggagagagagcgtctgtgatccatggatctccgatc 72 Query: 98 gggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcg 157 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73 gggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcg 132 Query: 158 aactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggc 217 |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 133 aactgaaacatctgagtagctaaaggaaggaaaatcaaaagagaaaccgttagtagcggc 192 Query: 218 gagcgagagcggaacaagggttttcatcaaaagaaatccgaagcggtttcattcgatttg 277 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 193 gagcgagagcggaacaagggtttgaatcaaaagaaatccgaagcggtttcattcgatttg 252 Query: 278 ttgtggattggatgatggaaaaaccagcaagcagcaagcgtagttagaaaagttgccgta 337 ||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct: 253 ttgtggattggatgatggaaaaaccagcaagcagcaagcgtag---gctgtgttgccgta 309 Query: 338 gcgcgccctacggagttgtacaaagtcagcaaccgttttggggcgcaagcataggcaaca 397 |||||||| || ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 310 gcgcgcccggatgacttgtacaaagtcagcaaccgttttggggcgcaagcgtaggcaaca 369 Query: 398 caggactgatgacggngtggggcgcgcagtgaactggtttt 438 ||| || | |||| ||||||||||||||||||||||||| Sbjct: 370 cagtac---ttacggggtggggcgcgcagtgaactggtttt 407
>gb|DQ008808.1| Croomia pauciflora large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3360 Score = 527 bits (266), Expect = e-147 Identities = 379/413 (91%), Gaps = 8/413 (1%) Strand = Plus / Plus Query: 27 agaaggaaggacgctttcagaggcgaaaggccatggggagatat-gaatctgtgatccat 85 ||||||| ||||||||||||||||||||||||||||||||| | | |||||||||||| Sbjct: 1 agaaggatggacgctttcagaggcgaaaggccatggggagagagagcgtctgtgatccat 60 Query: 86 ggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttt 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttt 120 Query: 146 tcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagacccc 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagacccc 180 Query: 206 gttagtagcggcgagcgagagcggaacaagggttttcatcaaaagaaatccgaagcggtt 265 ||||||||||||||||||||||||||||| |||||| ||| |||| ||||||||| Sbjct: 181 gttagtagcggcgagcgagagcggaacaa-ggttttaatcttttgaaaggagaagcggtt 239 Query: 266 tcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcgtagttaga 325 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 240 tcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcgtag---gc 296 Query: 326 aaagttgccgtagcgcgccctacggagttgtacaaagtcagcaaccgttttggggcgcaa 385 ||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 297 tgtgttgccgtagcgcgcccggatgacttgtacaaagtcagcaaccgttttggggcgcaa 356 Query: 386 gcataggcaacacaggactgatgacggngtggggcgcgcagtgaactggtttt 438 || |||||||||||| || | |||| ||||||||||||||||||||||||| Sbjct: 357 gcgtaggcaacacagtac---ttacggggtggggcgcgcagtgaactggtttt 406
>gb|DQ008814.1| Spathiphyllum wallisii large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3166 Score = 486 bits (245), Expect = e-134 Identities = 355/388 (91%), Gaps = 8/388 (2%) Strand = Plus / Plus Query: 47 aggcgaaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaaccg 106 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2 aggcgaaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaaaccg 60 Query: 107 tatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaac 166 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tatccaggctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaac 120 Query: 167 atctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagag 226 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 121 atctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgagag 180 Query: 227 cggaacaagggttttcatcaaaagaaa-tccgaagcggtttcattcgatttgttgtggat 285 |||| |||||| || |||| ||| | || ||||||||||||||||||||||||| Sbjct: 181 cggattgggggtttgaataaaaacaaagtgcgttccggtttcattcgatttgttgtggat 240 Query: 286 tggatgatggaaaaaccagcaagcagcaagcgtagttagaaaagttgccgtagcgcgccc 345 ||||||||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 241 tggatgatggaaaaaccagcaagcagcaagcgtag---gctgtgttgccgtagcgcgccc 297 Query: 346 tacggagttgtacaaagtcagcaaccgttttggggcgcaagcataggcaacacaggactg 405 ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 298 tactgagttgtacaaagtcagcaaccgttttggggcgcaagcgtaggcaacacaggac-- 355 Query: 406 atgacggngtggggcgcgcagtgaactg 433 | |||| |||||||||||||||||||| Sbjct: 356 -ttacggggtggggcgcgcagtgaactg 382
>dbj|D17777.1|RICMTT8613 Oryza sativa mitochondrial gene for 26S ribosomal RNA, partial sequence Length = 314 Score = 486 bits (245), Expect = e-134 Identities = 293/307 (95%), Gaps = 5/307 (1%) Strand = Plus / Plus Query: 106 gtatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaa 165 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 3 gtatccaagctccgtggctagtctgcgctctttgg-cttttcaancttagcgaactgaaa 61 Query: 166 catctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgaga 225 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 62 catctgagtagctaaaggaaggaaaatcaaccganaccccgttagtagcggcgagcgaga 121 Query: 226 gcggaacaagggttttcatcaaaagaaatccgaagcggtttcattcgatttgttgtggat 285 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 gcggnacaagggttttcatcaaaagaaatccgaagcggtttcattcgatttgttgtggat 181 Query: 286 tggatgatggaaaaaccagcaagcagcaagcgtagttagaaaagttgccgtagcgcgccc 345 ||||||||||||||||||||||||||||||||||| | |||||||||||| | || Sbjct: 182 tggatgatggaaaaaccagcaagcagcaagcgtag---gctgtgttgccgtagcgng-cc 237 Query: 346 tacggagttgtacaaagtcagcaaccgttttggggcgcaagcataggcaacacaggactg 405 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 238 tacggagttgtacaaagtcagcaaccgttttggggtgcaagcataggcaacacaggactg 297 Query: 406 atgacgg 412 ||||||| Sbjct: 298 atgacgg 304
>gb|DQ008813.1| Orontium aquaticum large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3203 Score = 472 bits (238), Expect = e-130 Identities = 332/361 (91%), Gaps = 7/361 (1%) Strand = Plus / Plus Query: 74 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 77 Query: 134 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 78 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatc 137 Query: 194 aaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaagaaa 253 ||||||||||||||||||||||||||||||||||||| |||||| || |||| ||| Sbjct: 138 aaccgagaccccgttagtagcggcgagcgagagcggattgggggtttgaataaaaacaaa 197 Query: 254 -tccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagc 312 | || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198 gtgcgttccggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagc 257 Query: 313 aagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaaccg 372 |||||||| | |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 258 aagcgtag---gctgtgttgccgtagcgcgccctactgagttgtacaaagtcagcaaccg 314 Query: 373 ttttggggcgcaagcataggcaacacaggactgatgacggngtggggcgcgcagtgaact 432 ||||||||||||||| |||||||||||| || | |||| ||||||||||||||||||| Sbjct: 315 ttttggggcgcaagcgtaggcaacacagtac---ttacggggtggggcgcgcagtgaact 371 Query: 433 g 433 | Sbjct: 372 g 372
>dbj|AK105631.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-D06, full insert sequence Length = 1388 Score = 424 bits (214), Expect = e-115 Identities = 242/251 (96%), Gaps = 3/251 (1%) Strand = Plus / Plus Query: 188 aaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaa 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 aaaatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaa 61 Query: 248 aagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaa 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 aagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaaccagcaa 121 Query: 308 gcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagc 367 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 122 gcagcaagcgtag---gctgtgttgccgtagcgcgccctacggagttgtacaaagtcagc 178 Query: 368 aaccgttttggggcgcaagcataggcaacacaggactgatgacggngtggggcgcgcagt 427 ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 179 aaccgttttggggcgcaagcataggcaacacaggactgatgacggggcggggcgcgcagt 238 Query: 428 gaactggtttt 438 ||||||||||| Sbjct: 239 gaactggtttt 249
>gb|DQ008772.1| Cinnamomum camphora large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3629 Score = 402 bits (203), Expect = e-109 Identities = 222/227 (97%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 81 Query: 64 gagatatgaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 123 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82 gagataccg-tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 140 Query: 124 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 200 Query: 184 aaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 230 |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 aagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 247 Score = 97.6 bits (49), Expect = 3e-17 Identities = 49/49 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagca 310 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 306 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagca 354
>dbj|BA000009.3| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete sequence Length = 368801 Score = 402 bits (203), Expect = e-109 Identities = 222/227 (97%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 347966 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 348025 Query: 64 gagatatgaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 123 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348026 gagataccg-tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 348084 Query: 124 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348085 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 348144 Query: 184 aaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 230 |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 348145 aagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 348191 Score = 402 bits (203), Expect = e-109 Identities = 222/227 (97%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 211993 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 212052 Query: 64 gagatatgaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 123 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212053 gagataccg-tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 212111 Query: 124 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212112 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 212171 Query: 184 aaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 230 |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 212172 aagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 212218 Score = 402 bits (203), Expect = e-109 Identities = 222/227 (97%), Gaps = 1/227 (0%) Strand = Plus / Minus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129212 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 129153 Query: 64 gagatatgaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 123 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129152 gagataccg-tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 129094 Query: 124 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129093 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 129034 Query: 184 aaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 230 |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 129033 aagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 128987 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 309 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348258 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 348305 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 309 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 212285 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 212332 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Minus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 309 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128920 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 128873 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 16 cccgggcattgagaaggaaggacgctttcagag 48 ||||||||||||||||||||||||||||||||| Sbjct: 85508 cccgggcattgagaaggaaggacgctttcagag 85540
>dbj|BA000024.1| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete sequence Length = 501020 Score = 402 bits (203), Expect = e-109 Identities = 222/227 (97%), Gaps = 1/227 (0%) Strand = Plus / Minus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 497357 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 497298 Query: 64 gagatatgaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 123 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 497297 gagataccg-tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 497239 Query: 124 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 497238 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 497179 Query: 184 aaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 230 |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 497178 aagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 497132 Score = 402 bits (203), Expect = e-109 Identities = 222/227 (97%), Gaps = 1/227 (0%) Strand = Plus / Minus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 323847 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 323788 Query: 64 gagatatgaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 123 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 323787 gagataccg-tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 323729 Query: 124 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 323728 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 323669 Query: 184 aaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 230 |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 323668 aagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 323622 Score = 402 bits (203), Expect = e-109 Identities = 222/227 (97%), Gaps = 1/227 (0%) Strand = Plus / Minus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131331 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 131272 Query: 64 gagatatgaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 123 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131271 gagataccg-tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 131213 Query: 124 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131212 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 131153 Query: 184 aaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 230 |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 131152 aagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 131106 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Minus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 309 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 497065 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 497018 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Minus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 309 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 323555 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 323508 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Minus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 309 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131039 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 130992 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 16 cccgggcattgagaaggaaggacgctttcagag 48 ||||||||||||||||||||||||||||||||| Sbjct: 269486 cccgggcattgagaaggaaggacgctttcagag 269454 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 16 cccgggcattgagaaggaaggacgctttcagag 48 ||||||||||||||||||||||||||||||||| Sbjct: 76970 cccgggcattgagaaggaaggacgctttcagag 76938
>gb|AF290292.1|AF290292 Cucumis sativus clone R36R mitochondrial genomic sequence Length = 700 Score = 394 bits (199), Expect = e-107 Identities = 221/227 (97%), Gaps = 1/227 (0%) Strand = Plus / Minus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 435 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 376 Query: 64 gagatatgaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 123 |||| | | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 375 gagagaa-agtctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 317 Query: 124 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 183 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 316 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatcttagtagctaaagg 257 Query: 184 aaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 230 |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 aagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 210
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 394 bits (199), Expect = e-107 Identities = 221/227 (97%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 417626 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 417685 Query: 64 gagatatgaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 123 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 417686 gagataccg-tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 417744 Query: 124 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 183 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 417745 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatcttagtagctaaagg 417804 Query: 184 aaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 230 |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 417805 aagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 417851 Score = 394 bits (199), Expect = e-107 Identities = 221/227 (97%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 66876 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 66935 Query: 64 gagatatgaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 123 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 66936 gagataccg-tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 66994 Query: 124 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 183 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 66995 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatcttagtagctaaagg 67054 Query: 184 aaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 230 |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 67055 aagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 67101 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 309 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 417920 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 417967 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 309 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67170 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 67217
>emb|X02559.1|MIOBRN26 Oenothera berteriana mitochondrial gene for 26S ribosomal RNA Length = 3672 Score = 394 bits (199), Expect = e-107 Identities = 221/227 (97%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 232 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 291 Query: 64 gagatatgaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 123 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 292 gagataccg-tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 350 Query: 124 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 410 Query: 184 aaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 230 |||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 411 aagggaaatcaaccgagactccgttagtagcggcgagcgagagcgga 457 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 309 ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 559 ggtttcattcgatttgttgtggattggatgatggataaaccagcaagc 606
>gb|L34218.1|POTRGTRRN Solanum tubersum mitochondrial 26S ribosomal RNA (rrn26) gene Length = 541 Score = 387 bits (195), Expect = e-104 Identities = 221/227 (97%), Gaps = 2/227 (0%) Strand = Plus / Plus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 285 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 344 Query: 64 gagatatgaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 123 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 345 gagataccg-tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 403 Query: 124 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 183 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 404 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatcttagtagctaaagg 463 Query: 184 aaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 230 |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 464 aagg-aaatcaaccgagaccccgttagtagcggcgagcgagagcgga 509
>gb|DQ008792.1| Saururus cernuus large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3662 Score = 387 bits (195), Expect = e-104 Identities = 220/227 (96%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 76 Query: 64 gagatatgaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 123 |||||| |||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 77 gagataccg-tctgtgatccatggatctccgatcgggaaaccgtatccaagcagcgtggc 135 Query: 124 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 195 Query: 184 aaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 230 |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 aagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 242 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 297 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 351
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 379 bits (191), Expect = e-102 Identities = 219/227 (96%), Gaps = 1/227 (0%) Strand = Plus / Minus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12081 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 12022 Query: 64 gagatatgaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 123 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12021 gagataccg-tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 11963 Query: 124 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 183 |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 11962 tagtctgcgctctttggactttgaaaacttagcgaactgaaacatctaagtagctaaagg 11903 Query: 184 aaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 230 |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 11902 aagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 11856 Score = 79.8 bits (40), Expect = 7e-12 Identities = 46/48 (95%) Strand = Plus / Minus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 309 ||||||||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 11792 ggtttcattcgatttattgtggattggatgatggaaaaaccagaaagc 11745 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 gtgatccatggatctccgatc 97 ||||||||||||||||||||| Sbjct: 38160 gtgatccatggatctccgatc 38140
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 379 bits (191), Expect = e-102 Identities = 219/227 (96%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119877 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 119936 Query: 64 gagatatgaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 123 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119937 gagataccg-tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 119995 Query: 124 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 183 |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 119996 tagtctgcgctctttggactttgaaaacttagcgaactgaaacatctaagtagctaaagg 120055 Query: 184 aaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 230 |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 120056 aagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 120102 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 309 ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 120166 ggtttcattcgatttcttgtggattggatgatggaaaaaccagcaagc 120213
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 379 bits (191), Expect = e-102 Identities = 219/227 (96%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 41495 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 41554 Query: 64 gagatatgaatctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 123 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 41555 gagataccg-tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggc 41613 Query: 124 tagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaagg 183 |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 41614 tagtctgcgctctttggactttgaaaacttagcgaactgaaacatctaagtagctaaagg 41673 Query: 184 aaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 230 |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 41674 aagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 41720 Score = 87.7 bits (44), Expect = 3e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 309 ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 41784 ggtttcattcgatttcttgtggattggatgatggaaaaaccagcaagc 41831
>gb|DQ008743.1| Buxus sempervirens large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3113 Score = 349 bits (176), Expect = 5e-93 Identities = 198/204 (97%), Gaps = 1/204 (0%) Strand = Plus / Plus Query: 27 agaaggaaggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatg 86 ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1 agaaggatggacgctttcagaggcgaaaggccatggggagataccg-tctgtgatccatg 59 Query: 87 gatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggactttt 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 gatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggactttt 119 Query: 147 caaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccg 206 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 120 caaacttagcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccg 179 Query: 207 ttagtagcggcgagcgagagcgga 230 |||||||||||||||||||||||| Sbjct: 180 ttagtagcggcgagcgagagcgga 203 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 309 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 348
>gb|DQ008777.1| Doryphora sassafras large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3353 Score = 345 bits (174), Expect = 7e-92 Identities = 196/202 (97%), Gaps = 1/202 (0%) Strand = Plus / Plus Query: 29 aaggaaggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatgga 88 ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaggatggacgctttcagaggcgaaaggccatggggagataccg-tctgtgatccatgga 59 Query: 89 tctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttca 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 tctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttca 119 Query: 149 aacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgtt 208 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 120 aacttagcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgtt 179 Query: 209 agtagcggcgagcgagagcgga 230 |||||||||||||||||||||| Sbjct: 180 agtagcggcgagcgagagcgga 201 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 309 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 270 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 317
>gb|DQ008773.1| Laurus nobilis large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3419 Score = 343 bits (173), Expect = 3e-91 Identities = 195/201 (97%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 30 aggaaggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatggat 89 |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1 aggatggacgctttcagaggcgaaaggccatggggagataccg-tctgtgatccatggat 59 Query: 90 ctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaa 149 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 ctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaa 119 Query: 150 acttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgtta 209 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 120 acttagcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgtta 179 Query: 210 gtagcggcgagcgagagcgga 230 ||||||||||||||||||||| Sbjct: 180 gtagcggcgagcgagagcgga 200 Score = 97.6 bits (49), Expect = 3e-17 Identities = 49/49 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagca 310 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 259 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagca 307
>gb|DQ008774.1| Cryptocarya meissneriana large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3504 Score = 341 bits (172), Expect = 1e-90 Identities = 191/196 (97%), Gaps = 1/196 (0%) Strand = Plus / Plus Query: 35 ggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatggatctccg 94 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1 ggacgctttcagaggcgaaaggccatggggagataccg-tctgtgatccatggatctccg 59 Query: 95 atcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaactta 154 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 atcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaactta 119 Query: 155 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 214 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 120 gcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagc 179 Query: 215 ggcgagcgagagcgga 230 |||||||||||||||| Sbjct: 180 ggcgagcgagagcgga 195 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 264 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 318
>gb|DQ008770.1| Gyrocarpus americanus large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3487 Score = 341 bits (172), Expect = 1e-90 Identities = 191/196 (97%), Gaps = 1/196 (0%) Strand = Plus / Plus Query: 35 ggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatggatctccg 94 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 2 ggacgctttcagaggcgaaaggccatggggagataccg-tctgtgatccatggatctccg 60 Query: 95 atcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaactta 154 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 atcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaactta 120 Query: 155 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 214 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 121 gcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagc 180 Query: 215 ggcgagcgagagcgga 230 |||||||||||||||| Sbjct: 181 ggcgagcgagagcgga 196 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 319
>gb|DQ008755.1| Podophyllum peltatum large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3164 Score = 341 bits (172), Expect = 1e-90 Identities = 191/196 (97%), Gaps = 1/196 (0%) Strand = Plus / Plus Query: 35 ggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatggatctccg 94 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1 ggacgctttcagaggcgaaaggccatggggagataccg-tctgtgatccatggatctccg 59 Query: 95 atcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaactta 154 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 atcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaactta 119 Query: 155 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 214 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 120 gcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagc 179 Query: 215 ggcgagcgagagcgga 230 |||||||||||||||| Sbjct: 180 ggcgagcgagagcgga 195 Score = 101 bits (51), Expect = 2e-18 Identities = 54/55 (98%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 316 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 265 ggtttcattcgatctgttgtggattggatgatggaaaaaccagcaagcagcaagc 319
>gb|DQ008754.1| Mahonia bealei large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3500 Score = 341 bits (172), Expect = 1e-90 Identities = 191/196 (97%), Gaps = 1/196 (0%) Strand = Plus / Plus Query: 35 ggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatggatctccg 94 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 3 ggacgctttcagaggcgaaaggccatggggagataccg-tctgtgatccatggatctccg 61 Query: 95 atcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaactta 154 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 atcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaactta 121 Query: 155 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 214 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 122 gcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagc 181 Query: 215 ggcgagcgagagcgga 230 |||||||||||||||| Sbjct: 182 ggcgagcgagagcgga 197 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 267 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 321
>gb|DQ008796.1| Aristolochia macrophylla large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3132 Score = 337 bits (170), Expect = 2e-89 Identities = 195/202 (96%), Gaps = 1/202 (0%) Strand = Plus / Plus Query: 29 aaggaaggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatgga 88 ||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 1 aaggatggacgctttcagaggcgaaaggccatggggagagaccg-tctgtgatccatgga 59 Query: 89 tctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttca 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 tctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttca 119 Query: 149 aacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgtt 208 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 120 aacttagcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgtt 179 Query: 209 agtagcggcgagcgagagcgga 230 |||||||||||||||||||||| Sbjct: 180 agtagcggcgagcgagagcgga 201 Score = 95.6 bits (48), Expect = 1e-16 Identities = 54/56 (96%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 317 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329 ggtttcattctttttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 384
>gb|DQ008828.1| Nymphaea sp. Qiu 91029 large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3388 Score = 333 bits (168), Expect = 3e-88 Identities = 190/196 (96%), Gaps = 1/196 (0%) Strand = Plus / Plus Query: 35 ggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatggatctccg 94 |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 3 ggacgctttctgaggcgaaaggccatggggagataccg-tctgtgatccatggatctccg 61 Query: 95 atcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaactta 154 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 atcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaactta 121 Query: 155 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 214 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 122 gcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagc 181 Query: 215 ggcgagcgagagcgga 230 |||||||||||||||| Sbjct: 182 ggcgagcgagagcgga 197 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaacc 302 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 557 ggtttcattcgatttgttgtggattggatgatggaaaaacc 597
>gb|DQ008769.1| Hedycarya arborea large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3451 Score = 333 bits (168), Expect = 3e-88 Identities = 190/196 (96%), Gaps = 1/196 (0%) Strand = Plus / Plus Query: 35 ggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatggatctccg 94 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5 ggacgctttcagaggcgaaaggccatggggagataccg-tctgtgatccatggatctccg 63 Query: 95 atcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaactta 154 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 64 atcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttaaaactta 123 Query: 155 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 214 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 124 gcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagc 183 Query: 215 ggcgagcgagagcgga 230 |||||||||||||||| Sbjct: 184 ggcgagcgagagcgga 199 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 322
>gb|DQ008788.1| Galbulimima belgraveana large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3224 Score = 327 bits (165), Expect = 2e-86 Identities = 197/205 (96%), Gaps = 2/205 (0%) Strand = Plus / Plus Query: 27 agaaggaaggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatg 86 ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1 agaaggatggacgctttcagaggcgaaaggccatggggagataccg-tctgtgatccatg 59 Query: 87 gatctccgatcgggaaaccgtatccaa-gctccgtggctagtctgcgctctttggacttt 145 ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 60 gatctccgatcgggaaaccgtatccgacgctccgtggctagtctgcgctctttggacttt 119 Query: 146 tcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagacccc 205 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 120 tcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagacccc 179 Query: 206 gttagtagcggcgagcgagagcgga 230 ||||||||||||||||||||||||| Sbjct: 180 gttagtagcggcgagcgagagcgga 204 Score = 87.7 bits (44), Expect = 3e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagc 305 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265 ggtttcattcgatttgttgtggattggatgatggaaaaaccagc 308
>gb|DQ008819.1| Chloranthus multistachys large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3339 Score = 325 bits (164), Expect = 7e-86 Identities = 195/204 (95%), Gaps = 1/204 (0%) Strand = Plus / Plus Query: 27 agaaggaaggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatg 86 ||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 1 agaaggatggacgcttgaagaggcgaaaggccatggggagataccg-tctgtgatccatg 59 Query: 87 gatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggactttt 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 gatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggactttt 119 Query: 147 caaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccg 206 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 120 caaacttagcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccg 179 Query: 207 ttagtagcggcgagcgagagcgga 230 | |||||||||||||||||||||| Sbjct: 180 tgagtagcggcgagcgagagcgga 203 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 309 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 272 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 319
>gb|DQ008746.1| Trochodendron aralioides large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3180 Score = 325 bits (164), Expect = 7e-86 Identities = 183/188 (97%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 43 tcagaggcgaaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaa 102 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 7 tcagaggcgaaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaa 65 Query: 103 accgtatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactg 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 66 accgtatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactg 125 Query: 163 aaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcg 222 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 126 aaacatctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcg 185 Query: 223 agagcgga 230 |||||||| Sbjct: 186 agagcgga 193 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 309 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 309
>gb|DQ008809.1| Carludovica palmata large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3171 Score = 323 bits (163), Expect = 3e-85 Identities = 163/163 (100%) Strand = Plus / Plus Query: 74 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 84 Query: 134 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatc 144 Query: 194 aaccgagaccccgttagtagcggcgagcgagagcggaacaagg 236 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145 aaccgagaccccgttagtagcggcgagcgagagcggaacaagg 187 Score = 230 bits (116), Expect = 3e-57 Identities = 176/195 (90%), Gaps = 6/195 (3%) Strand = Plus / Plus Query: 244 tcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 tcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaacca 260 Query: 304 gcaagcagcaagcgtagttagaaaagttgccgtagcgcgccctacggagttgtacaaagt 363 ||||||||||||||||| | ||||||||||||||||| || ||||||||||| Sbjct: 261 gcaagcagcaagcgtag---gctgtgttgccgtagcgcgcccggatgacttgtacaaagt 317 Query: 364 cagcaaccgttttggggcgcaagcataggcaacacaggactgatgacggngtggggcgcg 423 |||||||||||||||||||||||| |||||||||||| || | |||| |||||||||| Sbjct: 318 cagcaaccgttttggggcgcaagcgtaggcaacacagtac---ttacggggtggggcgcg 374 Query: 424 cagtgaactggtttt 438 ||||||||||||||| Sbjct: 375 cagtgaactggtttt 389
>gb|DQ008742.1| Pachysandra procumbens large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3132 Score = 323 bits (163), Expect = 3e-85 Identities = 182/187 (97%), Gaps = 1/187 (0%) Strand = Plus / Plus Query: 44 cagaggcgaaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaa 103 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1 cagaggcgaaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaaa 59 Query: 104 ccgtatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactga 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 ccgtatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactga 119 Query: 164 aacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcga 223 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 120 aacatctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcga 179 Query: 224 gagcgga 230 ||||||| Sbjct: 180 gagcgga 186 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 309 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 290 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 337
>gb|DQ008798.1| Lactoris fernandeziana large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3351 Score = 321 bits (162), Expect = 1e-84 Identities = 193/202 (95%), Gaps = 1/202 (0%) Strand = Plus / Plus Query: 29 aaggaaggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatgga 88 ||||| |||||||||| |||||||||||||||||||||| | ||||||||||||||| Sbjct: 1 aaggatggacgctttctgaggcgaaaggccatggggagagaccg-tctgtgatccatgga 59 Query: 89 tctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttca 148 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 tctccgatcggtaaaccgtatccaagctccgtggctagtctgcgctctttggacttttca 119 Query: 149 aacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgtt 208 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 120 aacttagcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgtt 179 Query: 209 agtagcggcgagcgagagcgga 230 |||||||||||||||||||||| Sbjct: 180 agtagcggcgagcgagagcgga 201 Score = 93.7 bits (47), Expect = 5e-16 Identities = 50/51 (98%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagc 312 |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 270 ggtttcattcgatttgttatggattggatgatggaaaaaccagcaagcagc 320
>gb|DQ008784.1| Cananga odorata large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3537 Score = 321 bits (162), Expect = 1e-84 Identities = 194/202 (96%), Gaps = 2/202 (0%) Strand = Plus / Plus Query: 30 aggaaggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatggat 89 |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1 aggatggacgctttcagaggcgaaaggccatggggagataccg-tctgtgatccatggat 59 Query: 90 ctccgatcgggaaaccgtatccaa-gctccgtggctagtctgcgctctttggacttttca 148 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 60 ctccgatcgggaaaccgtatccgacgctccgtggctagtctgcgctctttggacttttca 119 Query: 149 aacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgtt 208 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 120 aacttagcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgtt 179 Query: 209 agtagcggcgagcgagagcgga 230 |||||||||||||||||||||| Sbjct: 180 agtagcggcgagcgagagcgga 201 Score = 87.7 bits (44), Expect = 3e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagc 305 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 270 ggtttcattcgatttgttgtggattggatgatggaaaaaccagc 313
>gb|DQ008783.1| Annona muricata large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3404 Score = 321 bits (162), Expect = 1e-84 Identities = 194/202 (96%), Gaps = 2/202 (0%) Strand = Plus / Plus Query: 30 aggaaggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatggat 89 |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1 aggatggacgctttcagaggcgaaaggccatggggagataccg-tctgtgatccatggat 59 Query: 90 ctccgatcgggaaaccgtatccaa-gctccgtggctagtctgcgctctttggacttttca 148 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 60 ctccgatcgggaaaccgtatccgacgctccgtggctagtctgcgctctttggacttttca 119 Query: 149 aacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgtt 208 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 120 aacttagcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgtt 179 Query: 209 agtagcggcgagcgagagcgga 230 |||||||||||||||||||||| Sbjct: 180 agtagcggcgagcgagagcgga 201 Score = 87.7 bits (44), Expect = 3e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagc 305 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 263 ggtttcattcgatttgttgtggattggatgatggaaaaaccagc 306
>gb|DQ008766.1| Ceratophyllum demersum large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3548 Score = 321 bits (162), Expect = 1e-84 Identities = 193/202 (95%), Gaps = 1/202 (0%) Strand = Plus / Plus Query: 29 aaggaaggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatgga 88 ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaggatggacgctttcagaggcgaaaggccatggggagataccg-tctgtgatccatgga 59 Query: 89 tctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttca 148 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 60 tctccgatcgggaaaccgtatccaagcggagtggctagtctgcgctctttggacttttca 119 Query: 149 aacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgtt 208 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 120 aacttagcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgtt 179 Query: 209 agtagcggcgagcgagagcgga 230 |||||||||||||||||||||| Sbjct: 180 agtagcggcgagcgagagcgga 201 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 282 ggattggatgatggaaaaaccagcaagcagcaag 315 ||||||||||||||||||||| |||||||||||| Sbjct: 378 ggattggatgatggaaaaacctgcaagcagcaag 411
>gb|DQ008815.1| Pleea tenuifolia large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3186 Score = 317 bits (160), Expect = 2e-83 Identities = 179/184 (97%), Gaps = 1/184 (0%) Strand = Plus / Plus Query: 47 aggcgaaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaaccg 106 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1 aggcgaaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaaaccg 59 Query: 107 tatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaac 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 tatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaac 119 Query: 167 atctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagag 226 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 120 atctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgagag 179 Query: 227 cgga 230 |||| Sbjct: 180 cgga 183 Score = 218 bits (110), Expect = 1e-53 Identities = 158/173 (91%), Gaps = 6/173 (3%) Strand = Plus / Plus Query: 261 cggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcgtag 320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 cggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcgtag 281 Query: 321 ttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaaccgttttgggg 380 | |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 282 gctgt---gttgccgtagcgcgccctactgagttgtacaaagtcagcaaccgttttgggg 338 Query: 381 cgcaagcataggcaacacaggactgatgacggngtggggcgcgcagtgaactg 433 ||||||| |||||||||||| || | |||| |||||||||||||||||||| Sbjct: 339 cgcaagcgtaggcaacacagtac---ttacggggtggggcgcgcagtgaactg 388
>gb|DQ008761.1| Akebia quinata large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3422 Score = 317 bits (160), Expect = 2e-83 Identities = 179/184 (97%), Gaps = 1/184 (0%) Strand = Plus / Plus Query: 47 aggcgaaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaaccg 106 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1 aggcgaaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaaaccg 59 Query: 107 tatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaac 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 tatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaac 119 Query: 167 atctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagag 226 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 120 atctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgagag 179 Query: 227 cgga 230 |||| Sbjct: 180 cgga 183 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 309 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 253 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 300
>gb|DQ008752.1| Platanus occidentalis large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3351 Score = 317 bits (160), Expect = 2e-83 Identities = 179/184 (97%), Gaps = 1/184 (0%) Strand = Plus / Plus Query: 47 aggcgaaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaaccg 106 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2 aggcgaaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaaaccg 60 Query: 107 tatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaac 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaac 120 Query: 167 atctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagag 226 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 121 atctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgagag 180 Query: 227 cgga 230 |||| Sbjct: 181 cgga 184 Score = 111 bits (56), Expect = 2e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 302
>gb|DQ008789.1| Myristica fragrans large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3651 Score = 315 bits (159), Expect = 7e-83 Identities = 188/195 (96%), Gaps = 2/195 (1%) Strand = Plus / Plus Query: 37 acgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatggatctccgat 96 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 acgctttcagaggcgaaaggccatggggagataccg-tctgtgatccatggatctccgat 59 Query: 97 cgggaaaccgtatccaa-gctccgtggctagtctgcgctctttggacttttcaaacttag 155 ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 cgggaaaccgtatccgacgctccgtggctagtctgcgctctttggacttttcaaacttag 119 Query: 156 cgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcg 215 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 120 cgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcg 179 Query: 216 gcgagcgagagcgga 230 ||||||||||||||| Sbjct: 180 gcgagcgagagcgga 194 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 309 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 263 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 310
>gb|DQ008786.1| Liriodendron chinense large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3474 Score = 311 bits (157), Expect = 1e-81 Identities = 189/197 (95%), Gaps = 2/197 (1%) Strand = Plus / Plus Query: 35 ggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatggatctccg 94 ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 2 ggacgctttcagaggcgaaaggccatggggagagaccg-tctgtgatccatggatctccg 60 Query: 95 atcgggaaaccgtatccaa-gctccgtggctagtctgcgctctttggacttttcaaactt 153 ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 61 atcgggaaaccgtatccgacgctccgtggctagtctgcgctctttggacttttcaaactt 120 Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 121 agcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgttagtag 180 Query: 214 cggcgagcgagagcgga 230 ||||||||||||||||| Sbjct: 181 cggcgagcgagagcgga 197 Score = 87.7 bits (44), Expect = 3e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagc 305 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 266 ggtttcattcgatttgttgtggattggatgatggaaaaaccagc 309
>gb|DQ008757.1| Xanthorhiza simplicissima large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3433 Score = 311 bits (157), Expect = 1e-81 Identities = 179/185 (96%), Gaps = 1/185 (0%) Strand = Plus / Plus Query: 46 gaggcgaaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaacc 105 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1 gaggcgaaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaaacc 59 Query: 106 gtatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaa 165 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 60 gtatccaagctccgtggctagtctgcgctctttggactttttaaacttagcgaactgaaa 119 Query: 166 catctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgaga 225 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 120 catctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgaga 179 Query: 226 gcgga 230 ||||| Sbjct: 180 gcgga 184 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 311 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 365
>gb|DQ008745.1| Tetracentron sinense large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3158 Score = 311 bits (157), Expect = 1e-81 Identities = 176/181 (97%), Gaps = 1/181 (0%) Strand = Plus / Plus Query: 50 cgaaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaaccgtat 109 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1 cgaaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaaaccgtat 59 Query: 110 ccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacatc 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 ccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacatc 119 Query: 170 tgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgg 229 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 tgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgg 179 Query: 230 a 230 | Sbjct: 180 a 180 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 309 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 296
>gb|DQ008744.1| Didymeles perrieri large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3161 Score = 311 bits (157), Expect = 1e-81 Identities = 176/181 (97%), Gaps = 1/181 (0%) Strand = Plus / Plus Query: 50 cgaaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaaccgtat 109 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1 cgaaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaaaccgtat 59 Query: 110 ccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacatc 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 ccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacatc 119 Query: 170 tgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgg 229 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 tgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgg 179 Query: 230 a 230 | Sbjct: 180 a 180 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 309 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 330 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 377
>gb|DQ008775.1| Atherosperma moschatum large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3333 Score = 307 bits (155), Expect = 2e-80 Identities = 174/179 (97%), Gaps = 1/179 (0%) Strand = Plus / Plus Query: 52 aaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaaccgtatcc 111 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1 aaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaaaccgtatcc 59 Query: 112 aagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctg 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 aagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctg 119 Query: 172 agtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 230 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 agtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 178 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 301
>gb|DQ008760.1| Lardizabala biternata large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3423 Score = 307 bits (155), Expect = 2e-80 Identities = 174/179 (97%), Gaps = 1/179 (0%) Strand = Plus / Plus Query: 52 aaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaaccgtatcc 111 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1 aaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaaaccgtatcc 59 Query: 112 aagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctg 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 aagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctg 119 Query: 172 agtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 230 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 agtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 178 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 309 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 309
>gb|DQ008756.1| Ranunculus sp. Qiu 95-024 large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3371 Score = 307 bits (155), Expect = 2e-80 Identities = 174/179 (97%), Gaps = 1/179 (0%) Strand = Plus / Plus Query: 52 aaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaaccgtatcc 111 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1 aaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaaaccgtatcc 59 Query: 112 aagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctg 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 aagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctg 119 Query: 172 agtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 230 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 agtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 178 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 317 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 371
>gb|DQ008804.1| Canella winterana large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3188 Score = 303 bits (153), Expect = 3e-79 Identities = 156/157 (99%) Strand = Plus / Plus Query: 74 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 68 Query: 134 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 69 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatc 128 Query: 194 aaccgagaccccgttagtagcggcgagcgagagcgga 230 ||||||||||||||||||||||||||||||||||||| Sbjct: 129 aaccgagaccccgttagtagcggcgagcgagagcgga 165 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 278
>gb|DQ008803.1| Takhtajania perrieri large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3692 Score = 303 bits (153), Expect = 3e-79 Identities = 156/157 (99%) Strand = Plus / Plus Query: 74 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 87 Query: 134 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 88 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatc 147 Query: 194 aaccgagaccccgttagtagcggcgagcgagagcgga 230 ||||||||||||||||||||||||||||||||||||| Sbjct: 148 aaccgagaccccgttagtagcggcgagcgagagcgga 184 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 301
>gb|DQ008763.1| Euptelea polyandra large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3374 Score = 303 bits (153), Expect = 3e-79 Identities = 156/157 (99%) Strand = Plus / Plus Query: 74 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 73 Query: 134 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 74 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatc 133 Query: 194 aaccgagaccccgttagtagcggcgagcgagagcgga 230 ||||||||||||||||||||||||||||||||||||| Sbjct: 134 aaccgagaccccgttagtagcggcgagcgagagcgga 170 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 239 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 293
>gb|DQ008759.1| Cocculus trilobus large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3399 Score = 303 bits (153), Expect = 3e-79 Identities = 156/157 (99%) Strand = Plus / Plus Query: 74 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 71 Query: 134 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 72 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatc 131 Query: 194 aaccgagaccccgttagtagcggcgagcgagagcgga 230 ||||||||||||||||||||||||||||||||||||| Sbjct: 132 aaccgagaccccgttagtagcggcgagcgagagcgga 168 Score = 101 bits (51), Expect = 2e-18 Identities = 51/51 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagc 312 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 286 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagc 336
>gb|DQ008753.1| Nelumbo nucifera large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3363 Score = 303 bits (153), Expect = 3e-79 Identities = 156/157 (99%) Strand = Plus / Plus Query: 74 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 73 Query: 134 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 74 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatc 133 Query: 194 aaccgagaccccgttagtagcggcgagcgagagcgga 230 ||||||||||||||||||||||||||||||||||||| Sbjct: 134 aaccgagaccccgttagtagcggcgagcgagagcgga 170 Score = 111 bits (56), Expect = 2e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 233 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 288
>gb|DQ008751.1| Grevillea robusta large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3805 Score = 303 bits (153), Expect = 3e-79 Identities = 156/157 (99%) Strand = Plus / Plus Query: 74 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 71 Query: 134 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 72 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatc 131 Query: 194 aaccgagaccccgttagtagcggcgagcgagagcgga 230 ||||||||||||||||||||||||||||||||||||| Sbjct: 132 aaccgagaccccgttagtagcggcgagcgagagcgga 168 Score = 111 bits (56), Expect = 2e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 325 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 380
>gb|DQ008750.1| Persoonia katerae large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3782 Score = 303 bits (153), Expect = 3e-79 Identities = 156/157 (99%) Strand = Plus / Plus Query: 74 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 63 Query: 134 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 64 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatc 123 Query: 194 aaccgagaccccgttagtagcggcgagcgagagcgga 230 ||||||||||||||||||||||||||||||||||||| Sbjct: 124 aaccgagaccccgttagtagcggcgagcgagagcgga 160 Score = 111 bits (56), Expect = 2e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 359
>gb|DQ008747.1| Sabia sp. Qiu 91025 large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3596 Score = 303 bits (153), Expect = 3e-79 Identities = 156/157 (99%) Strand = Plus / Plus Query: 74 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 78 Query: 134 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 79 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatc 138 Query: 194 aaccgagaccccgttagtagcggcgagcgagagcgga 230 ||||||||||||||||||||||||||||||||||||| Sbjct: 139 aaccgagaccccgttagtagcggcgagcgagagcgga 175 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 298
>gb|DQ008765.1| Sanguinaria canadensis large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3316 Score = 301 bits (152), Expect = 1e-78 Identities = 174/180 (96%), Gaps = 1/180 (0%) Strand = Plus / Plus Query: 51 gaaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaaccgtatc 110 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaaaccgtatc 59 Query: 111 caagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacatct 170 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 60 caagctccgtggctagtctgcgctctttggacttttaaaacttagcgaactgaaacatct 119 Query: 171 gagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 230 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 gagtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 179 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 309 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 295
>gb|DQ008820.1| Sarcandra chloranthoides large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3783 Score = 295 bits (149), Expect = 6e-77 Identities = 155/157 (98%) Strand = Plus / Plus Query: 74 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 69 Query: 134 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 70 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatc 129 Query: 194 aaccgagaccccgttagtagcggcgagcgagagcgga 230 |||||||||||||| |||||||||||||||||||||| Sbjct: 130 aaccgagaccccgtgagtagcggcgagcgagagcgga 166 Score = 101 bits (51), Expect = 2e-18 Identities = 54/55 (98%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 316 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 235 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagctgcaagc 289
>gb|DQ008749.1| Petrophile canescens large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3733 Score = 295 bits (149), Expect = 6e-77 Identities = 155/157 (98%) Strand = Plus / Plus Query: 74 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 73 Query: 134 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatc 193 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 74 tctttggacttttaaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatc 133 Query: 194 aaccgagaccccgttagtagcggcgagcgagagcgga 230 ||||||||||||||||||||||||||||||||||||| Sbjct: 134 aaccgagaccccgttagtagcggcgagcgagagcgga 170 Score = 111 bits (56), Expect = 2e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 437
>gb|DQ008805.1| Cinnamodendron ekmanii large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3037 Score = 293 bits (148), Expect = 2e-76 Identities = 151/152 (99%) Strand = Plus / Plus Query: 79 gatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctcttt 138 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctcttt 60 Query: 139 ggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccg 198 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 61 ggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatcaaccg 120 Query: 199 agaccccgttagtagcggcgagcgagagcgga 230 |||||||||||||||||||||||||||||||| Sbjct: 121 agaccccgttagtagcggcgagcgagagcgga 152 Score = 69.9 bits (35), Expect = 7e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 282 ggattggatgatggaaaaaccagcaagcagcaagc 316 ||||||||||||||||||||||||||||||||||| Sbjct: 226 ggattggatgatggaaaaaccagcaagcagcaagc 260
>gb|DQ008764.1| Dicentra sp. Qiu 95026 large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3297 Score = 293 bits (148), Expect = 2e-76 Identities = 154/156 (98%) Strand = Plus / Plus Query: 75 ctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgct 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgct 60 Query: 135 ctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatca 194 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 61 ctttggacttttaaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatca 120 Query: 195 accgagaccccgttagtagcggcgagcgagagcgga 230 |||||||||||||||||||||||||||||||||||| Sbjct: 121 accgagaccccgttagtagcggcgagcgagagcgga 156 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 309 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 296
>gb|DQ008758.1| Cissampelos pareira large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3375 Score = 287 bits (145), Expect = 2e-74 Identities = 154/157 (98%) Strand = Plus / Plus Query: 74 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9 tctgtgatccatggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgc 68 Query: 134 tctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatc 193 |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 69 tctttggactttgaaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatc 128 Query: 194 aaccgagaccccgttagtagcggcgagcgagagcgga 230 ||||||||||||||||||||||||||||||||||||| Sbjct: 129 aaccgagaccccgttagtagcggcgagcgagagcgga 165 Score = 101 bits (51), Expect = 2e-18 Identities = 51/51 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagc 312 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 283 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagc 333
>gb|DQ008810.1| Potamogeton berchtoldii large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 2954 Score = 285 bits (144), Expect = 6e-74 Identities = 175/184 (95%), Gaps = 1/184 (0%) Strand = Plus / Plus Query: 47 aggcgaaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaaccg 106 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1 aggcgaaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaaaccg 59 Query: 107 tatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaac 166 ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 tatccaagctccgtgtcccgtctgcgctctttggacttttcaaacttagcgaactgaaac 119 Query: 167 atctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagag 226 ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 120 atctgagtagctaaaggaagggaaatcaaccgagaccccgtgagtagcggcgagcgagag 179 Query: 227 cgga 230 |||| Sbjct: 180 cgga 183 Score = 97.6 bits (49), Expect = 3e-17 Identities = 49/49 (100%) Strand = Plus / Plus Query: 261 cggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 309 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 202 cggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 250 Score = 54.0 bits (27), Expect = 4e-04 Identities = 84/102 (82%), Gaps = 6/102 (5%) Strand = Plus / Plus Query: 332 gccgtagcgcgccctacggagttgtacaaagtcagcaaccgttttggggcgcaagcatag 391 |||||||||||||| || ||||||||||||||||||| |||||||||||| | | Sbjct: 274 gccgtagcgcgcccggatgacttgtacaaagtcagcaacc----tggggcgcaagcgtgg 329 Query: 392 gcaacacaggactgatgacggngtggggcgcgcagtgaactg 433 || |||||| || | |||| |||||||||||||||||||| Sbjct: 330 gccacacagtacg--tcacggggtggggcgcgcagtgaactg 369
>gb|DQ008785.1| Eupomatia bennettii large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3304 Score = 281 bits (142), Expect = 9e-73 Identities = 155/158 (98%), Gaps = 1/158 (0%) Strand = Plus / Plus Query: 74 tctgtgatccatggatctccgatcgggaaaccgtatccaa-gctccgtggctagtctgcg 132 |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 2 tctgtgatccatggatctccgatcgggaaaccgtatccgacgctccgtggctagtctgcg 61 Query: 133 ctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaat 192 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 62 ctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaat 121 Query: 193 caaccgagaccccgttagtagcggcgagcgagagcgga 230 |||||||||||||||||||||||||||||||||||||| Sbjct: 122 caaccgagaccccgttagtagcggcgagcgagagcgga 159 Score = 87.7 bits (44), Expect = 3e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagc 305 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 ggtttcattcgatttgttgtggattggatgatggaaaaaccagc 263
>gb|DQ008741.1| Magnolia tripetala large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3462 Score = 281 bits (142), Expect = 9e-73 Identities = 155/158 (98%), Gaps = 1/158 (0%) Strand = Plus / Plus Query: 74 tctgtgatccatggatctccgatcgggaaaccgtatccaa-gctccgtggctagtctgcg 132 |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 1 tctgtgatccatggatctccgatcgggaaaccgtatccgacgctccgtggctagtctgcg 60 Query: 133 ctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaat 192 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 61 ctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaat 120 Query: 193 caaccgagaccccgttagtagcggcgagcgagagcgga 230 |||||||||||||||||||||||||||||||||||||| Sbjct: 121 caaccgagaccccgttagtagcggcgagcgagagcgga 158 Score = 87.7 bits (44), Expect = 3e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagc 305 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 227 ggtttcattcgatttgttgtggattggatgatggaaaaaccagc 270
>dbj|AK063521.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-H08, full insert sequence Length = 2553 Score = 274 bits (138), Expect = 2e-70 Identities = 163/171 (95%), Gaps = 3/171 (1%) Strand = Plus / Plus Query: 268 attcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcgtagttagaaa 327 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1 attcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcgtaggctgt-- 58 Query: 328 agttgccgtagcgcgccctacggagttgtacaaagtcagcaaccgttttggggcgcaagc 387 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 59 -gttgccgtagcgcgccctacggagttgtacaaagtcagcaaccgttttggggcgcaagc 117 Query: 388 ataggcaacacaggactgatgacggngtggggcgcgcagtgaactggtttt 438 ||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 118 ataggcaacacaggactgatgacggggtggggcgcgcagtgaactggtttt 168
>dbj|AK064285.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-G10, full insert sequence Length = 2011 Score = 264 bits (133), Expect = 2e-67 Identities = 158/166 (95%), Gaps = 3/166 (1%) Strand = Plus / Plus Query: 273 atttgttgtggattggatgatggaaaaaccagcaagcagcaagcgtagttagaaaagttg 332 |||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 1 atttgttgtggattggatgatggaaaaaccagcaagcagcaagcgtaggctgt---gttg 57 Query: 333 ccgtagcgcgccctacggagttgtacaaagtcagcaaccgttttggggcgcaagcatagg 392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58 ccgtagcgcgccctacggagttgtacaaagtcagcaaccgttttggggcgcaagcatagg 117 Query: 393 caacacaggactgatgacggngtggggcgcgcagtgaactggtttt 438 |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 118 caacacaggactgatgacggggtggggcgcgcagtgaactggtttt 163
>gb|DQ008787.1| Degeneria vitiensis large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3368 Score = 262 bits (132), Expect = 9e-67 Identities = 145/148 (97%), Gaps = 1/148 (0%) Strand = Plus / Plus Query: 84 atggatctccgatcgggaaaccgtatccaa-gctccgtggctagtctgcgctctttggac 142 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 1 atggatctccgatcgggaaaccgtatccgacgctccgtggctagtctgcgctctttggac 60 Query: 143 ttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagac 202 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 61 ttttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagac 120 Query: 203 cccgttagtagcggcgagcgagagcgga 230 |||||||||||||||||||||||||||| Sbjct: 121 cccgttagtagcggcgagcgagagcgga 148 Score = 87.7 bits (44), Expect = 3e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagc 305 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 ggtttcattcgatttgttgtggattggatgatggaaaaaccagc 260
>gb|DQ008781.1| Chimonanthus praecox large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3531 Score = 260 bits (131), Expect = 3e-66 Identities = 134/135 (99%) Strand = Plus / Plus Query: 96 tcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaacttag 155 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaacttag 60 Query: 156 cgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcg 215 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 61 cgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcg 120 Query: 216 gcgagcgagagcgga 230 ||||||||||||||| Sbjct: 121 gcgagcgagagcgga 135 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 254
>gb|DQ008812.1| Alisma plantago-aquatica large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 2838 Score = 254 bits (128), Expect = 2e-64 Identities = 168/180 (93%), Gaps = 1/180 (0%) Strand = Plus / Plus Query: 51 gaaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaaccgtatc 110 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaaaccgtatc 59 Query: 111 caagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacatct 170 ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 caagctccgtgtcccgtctgcgctctttggacttttcaaacttagcgaactgaaacatct 119 Query: 171 gagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 230 ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 120 ccgtagctaaaggaagggaaatcaaccgagaccccgtccgtagcggcgagcgagagcgga 179 Score = 89.7 bits (45), Expect = 7e-15 Identities = 45/45 (100%) Strand = Plus / Plus Query: 261 cggtttcattcgatttgttgtggattggatgatggaaaaaccagc 305 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 cggtttcattcgatttgttgtggattggatgatggaaaaaccagc 253 Score = 54.0 bits (27), Expect = 4e-04 Identities = 43/48 (89%), Gaps = 4/48 (8%) Strand = Plus / Plus Query: 353 ttgtacaaagtcagcaaccgttttggggcgcaagcataggcaacacag 400 ||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 303 ttgtacaaagtcagcaacc----tggggcgcaagcgtaggcaacacag 346
>gb|DQ008802.1| Tasmannia insipida large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3698 Score = 250 bits (126), Expect = 3e-63 Identities = 129/130 (99%) Strand = Plus / Plus Query: 101 aaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaac 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaac 60 Query: 161 tgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgag 220 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 61 tgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgag 120 Query: 221 cgagagcgga 230 |||||||||| Sbjct: 121 cgagagcgga 130 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 247
>gb|DQ008838.1| Ginkgo biloba large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 2815 Score = 242 bits (122), Expect = 8e-61 Identities = 168/182 (92%), Gaps = 1/182 (0%) Strand = Plus / Plus Query: 49 gcgaaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaaccgta 108 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1 gcgaaaggccatggggagataccg-tctgtgatccatggatctccgatcgggaaaccgta 59 Query: 109 tccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacat 168 |||||||||||||||||||| |||| | ||||||||| ||||||||||||||||||||| Sbjct: 60 tccaagctccgtggctagtccgcgccccttggactttcaaaacttagcgaactgaaacat 119 Query: 169 ctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcg 228 || |||||||| ||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 120 ctaagtagctagaggaaggggaatcaaccgagaccccgttagtagcggcgagcgaaagcg 179 Query: 229 ga 230 || Sbjct: 180 ga 181
>gb|DQ008811.1| Triglochin maritimum large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 2937 Score = 240 bits (121), Expect = 3e-60 Identities = 136/141 (96%) Strand = Plus / Plus Query: 90 ctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttttcaa 149 |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 1 ctccgatcgggaaaccgtatccaagctccgtgtcccgtctgcgctctttggacttttcaa 60 Query: 150 acttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgtta 209 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct: 61 acttagcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgtga 120 Query: 210 gtagcggcgagcgagagcgga 230 ||||||||||||||||||||| Sbjct: 121 gtagcggcgagcgagagcgga 141 Score = 97.6 bits (49), Expect = 3e-17 Identities = 49/49 (100%) Strand = Plus / Plus Query: 261 cggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 309 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 166 cggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagc 214 Score = 89.7 bits (45), Expect = 7e-15 Identities = 89/103 (86%), Gaps = 2/103 (1%) Strand = Plus / Plus Query: 332 gccgtagcgcgccctacggagttgtacaaagtcagcaaccgttttggggcgcaagcatag 391 |||||||||||||| || ||||||||||| ||||||||||||||||||||||| ||| Sbjct: 238 gccgtagcgcgcccggatgacttgtacaaagtaagcaaccgttttggggcgcaagcgtag 297 Query: 392 gcaacacaggactgatgacggngtggggcgcgcagtgaactgg 434 || |||||| || | |||| ||||||||||||||||||||| Sbjct: 298 gccacacagtac--gtcacggggtggggcgcgcagtgaactgg 338
>gb|DQ008801.1| Drimys winteri large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3734 Score = 234 bits (118), Expect = 2e-58 Identities = 121/122 (99%) Strand = Plus / Plus Query: 109 tccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacat 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tccaagctccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacat 60 Query: 169 ctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcg 228 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgagagcg 120 Query: 229 ga 230 || Sbjct: 121 ga 122 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 239
>gb|DQ008816.1| Tofieldia calyculata large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3092 Score = 218 bits (110), Expect = 1e-53 Identities = 158/173 (91%), Gaps = 6/173 (3%) Strand = Plus / Plus Query: 261 cggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcgtag 320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104 cggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcgtag 163 Query: 321 ttagaaaagttgccgtagcgcgccctacggagttgtacaaagtcagcaaccgttttgggg 380 | |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 164 gctgt---gttgccgtagcgcgccctactgagttgtacaaagtcagcaaccgttttgggg 220 Query: 381 cgcaagcataggcaacacaggactgatgacggngtggggcgcgcagtgaactg 433 ||||||| |||||||||||| || | |||| |||||||||||||||||||| Sbjct: 221 cgcaagcgtaggcaacacagtac---ttacggggtggggcgcgcagtgaactg 270 Score = 113 bits (57), Expect = 5e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 170 tgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgg 229 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgg 60 Query: 230 a 230 | Sbjct: 61 a 61
>gb|DQ008829.1| Nuphar sp. Qiu M114 large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3157 Score = 204 bits (103), Expect = 2e-49 Identities = 113/115 (98%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 116 tccgtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagta 175 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1 tccgtggctagtctgcgctctttg-acttttcaaacttagcgaactgaaacatctgagta 59 Query: 176 gctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 230 |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 gctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 114 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaacc 302 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ggtttcattcgatttgttgtggattggatgatggaaaaacc 401
>gb|DQ008831.1| Cabomba sp. Qiu 97027 large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3222 Score = 192 bits (97), Expect = 7e-46 Identities = 103/105 (98%) Strand = Plus / Plus Query: 126 gtctgcgctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaa 185 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 95 gtctgcgctctttggactttgcaaacttagcgaactgaaacatctgagtagctaaaggaa 154 Query: 186 ggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 230 || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 155 gggaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 199 Score = 121 bits (61), Expect = 2e-24 Identities = 77/81 (95%), Gaps = 1/81 (1%) Strand = Plus / Plus Query: 35 ggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatggatctccg 94 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5 ggacgctttcagaggcgaaaggccatggggagataccg-tctgtgatccatggatctccg 63 Query: 95 atcgggaaaccgtatccaagc 115 ||||||||||||||||||||| Sbjct: 64 atcgggaaaccgtatccaagc 84 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaacc 302 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 545 ggtttcattcgatttgttgtggattggatgatggaaaaacc 585
>emb|BX000345.4|CNS08CDB Oryza sativa chromosome 12, . BAC OSJNBb0111J10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128678 Score = 190 bits (96), Expect = 3e-45 Identities = 121/127 (95%), Gaps = 3/127 (2%) Strand = Plus / Plus Query: 132 gctctttggacttttcaaacttagcgaactgaaacatctgagtagcta--aaggaaggaa 189 ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 47533 gctctttggacttttcaaacttagcgaactgaaacat-tgagtagctagaaaggaaggaa 47591 Query: 190 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 249 |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 47592 aatcaaccgagagcccgttagtagcggcaagcgagagcggaacaagggtttttatcaaaa 47651 Query: 250 gaaatcc 256 ||||||| Sbjct: 47652 gaaatcc 47658
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 190 bits (96), Expect = 3e-45 Identities = 121/127 (95%), Gaps = 3/127 (2%) Strand = Plus / Minus Query: 132 gctctttggacttttcaaacttagcgaactgaaacatctgagtagcta--aaggaaggaa 189 ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 6210081 gctctttggacttttcaaacttagcgaactgaaacat-tgagtagctagaaaggaaggaa 6210023 Query: 190 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 249 |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 6210022 aatcaaccgagagcccgttagtagcggcaagcgagagcggaacaagggtttttatcaaaa 6209963 Query: 250 gaaatcc 256 ||||||| Sbjct: 6209962 gaaatcc 6209956 Score = 155 bits (78), Expect = 1e-34 Identities = 115/126 (91%), Gaps = 1/126 (0%) Strand = Plus / Plus Query: 132 gctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaa 191 |||||||| |||||||||||||||||||||| ||||| |||| |||||||||||||||| Sbjct: 6492577 gctctttgaacttttcaaacttagcgaactggaacatatgaggtgctaaaggaaggaaaa 6492636 Query: 192 tcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaaga 251 |||||||||| ||||| |||| |||||||||||| ||||| |||||||||||||||||| Sbjct: 6492637 tcaaccgaga-cccgtcagtaacggcgagcgagaacggaatgagggttttcatcaaaaga 6492695 Query: 252 aatccg 257 |||||| Sbjct: 6492696 aatccg 6492701 Score = 147 bits (74), Expect = 4e-32 Identities = 74/74 (100%) Strand = Plus / Minus Query: 242 catcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13457810 catcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaac 13457751 Query: 302 cagcaagcagcaag 315 |||||||||||||| Sbjct: 13457750 cagcaagcagcaag 13457737
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 190 bits (96), Expect = 3e-45 Identities = 121/127 (95%), Gaps = 3/127 (2%) Strand = Plus / Minus Query: 132 gctctttggacttttcaaacttagcgaactgaaacatctgagtagcta--aaggaaggaa 189 ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 6209956 gctctttggacttttcaaacttagcgaactgaaacat-tgagtagctagaaaggaaggaa 6209898 Query: 190 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 249 |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 6209897 aatcaaccgagagcccgttagtagcggcaagcgagagcggaacaagggtttttatcaaaa 6209838 Query: 250 gaaatcc 256 ||||||| Sbjct: 6209837 gaaatcc 6209831 Score = 155 bits (78), Expect = 1e-34 Identities = 115/126 (91%), Gaps = 1/126 (0%) Strand = Plus / Plus Query: 132 gctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaa 191 |||||||| |||||||||||||||||||||| ||||| |||| |||||||||||||||| Sbjct: 6492452 gctctttgaacttttcaaacttagcgaactggaacatatgaggtgctaaaggaaggaaaa 6492511 Query: 192 tcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaaga 251 |||||||||| ||||| |||| |||||||||||| ||||| |||||||||||||||||| Sbjct: 6492512 tcaaccgaga-cccgtcagtaacggcgagcgagaacggaatgagggttttcatcaaaaga 6492570 Query: 252 aatccg 257 |||||| Sbjct: 6492571 aatccg 6492576 Score = 147 bits (74), Expect = 4e-32 Identities = 74/74 (100%) Strand = Plus / Minus Query: 242 catcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13412084 catcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaac 13412025 Query: 302 cagcaagcagcaag 315 |||||||||||||| Sbjct: 13412024 cagcaagcagcaag 13412011
>emb|BX664712.3|CNS09SC2 Oryza sativa chromosome 12, . BAC B1373G08 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131531 Score = 190 bits (96), Expect = 3e-45 Identities = 121/127 (95%), Gaps = 3/127 (2%) Strand = Plus / Minus Query: 132 gctctttggacttttcaaacttagcgaactgaaacatctgagtagcta--aaggaaggaa 189 ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 107063 gctctttggacttttcaaacttagcgaactgaaacat-tgagtagctagaaaggaaggaa 107005 Query: 190 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 249 |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 107004 aatcaaccgagagcccgttagtagcggcaagcgagagcggaacaagggtttttatcaaaa 106945 Query: 250 gaaatcc 256 ||||||| Sbjct: 106944 gaaatcc 106938
>emb|AL831805.4|CNS08CAI Oryza sativa chromosome 12, . BAC OSJNBa0085J02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 166508 Score = 190 bits (96), Expect = 3e-45 Identities = 121/127 (95%), Gaps = 3/127 (2%) Strand = Plus / Plus Query: 132 gctctttggacttttcaaacttagcgaactgaaacatctgagtagcta--aaggaaggaa 189 ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 129191 gctctttggacttttcaaacttagcgaactgaaacat-tgagtagctagaaaggaaggaa 129249 Query: 190 aatcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaa 249 |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 129250 aatcaaccgagagcccgttagtagcggcaagcgagagcggaacaagggtttttatcaaaa 129309 Query: 250 gaaatcc 256 ||||||| Sbjct: 129310 gaaatcc 129316
>gb|DQ008840.1| Cycas revoluta large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 2745 Score = 186 bits (94), Expect = 4e-44 Identities = 133/146 (91%) Strand = Plus / Plus Query: 85 tggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggactt 144 |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 1 tggatctccgatcgggaaaccgtatccaagctccgtggctagtccgcgctccttggactc 60 Query: 145 ttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccc 204 | ||||||||||| ||||||||| |||||||| ||||||| ||||||||||||||| Sbjct: 61 tcaggacttagcgaaccgaaacatctaagtagctagaggaaggggaatcaaccgagaccc 120 Query: 205 cgttagtagcggcgagcgagagcgga 230 ||||||||||||||||||| |||||| Sbjct: 121 cgttagtagcggcgagcgaaagcgga 146 Score = 56.0 bits (28), Expect = 1e-04 Identities = 38/40 (95%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 265 ttcattcgatttgttgt-ggattggatgatggaaaaacca 303 |||||||||||||||| |||||||||||||||||||||| Sbjct: 225 ttcattcgatttgttggcggattggatgatggaaaaacca 264
>gb|DQ008839.1| Zamia integrifolia large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 2779 Score = 180 bits (91), Expect = 3e-42 Identities = 178/205 (86%), Gaps = 9/205 (4%) Strand = Plus / Plus Query: 26 gagaaggaaggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccat 85 |||||||| ||||||| ||| ||||||||||||||||||||||| |||||||||||| Sbjct: 1 gagaaggatggacgctctcaaaggcgaaaggccatggggagataccg-tctgtgatccat 59 Query: 86 ggatctccgatcgggaaaccgtatccaagctccgtggctagtctgcgctctttggacttt 145 ||||||||||||||||||||||||||||||| |||||| ||||| ||||||| | Sbjct: 60 ggatctccgatcgggaaaccgtatccaagct----ggctag----cgctccttggactct 111 Query: 146 tcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagacccc 205 ||||||||||| ||||||||| |||||||| ||||||| |||||||||||||||| Sbjct: 112 caggacttagcgaaccgaaacatctaagtagctagaggaaggggaatcaaccgagacccc 171 Query: 206 gttagtagcggcgagcgagagcgga 230 |||||||||||||||||| |||||| Sbjct: 172 gttagtagcggcgagcgaaagcgga 196 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 278 ttgtggattggatgatggaaaaacca 303 ||||| |||||||||||||||||||| Sbjct: 290 ttgtgaattggatgatggaaaaacca 315
>gb|DQ008830.1| Brasenia schreberi large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3136 Score = 176 bits (89), Expect = 4e-41 Identities = 107/112 (95%), Gaps = 2/112 (1%) Strand = Plus / Plus Query: 121 ggctagtctgcgctctttggacttttc--aaacttagcgaactgaaacatctgagtagct 178 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1 ggctagtctgcgctctttggactttgagaaaacttagcgaactgaaacatctgagtagct 60 Query: 179 aaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 230 ||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 112 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gattggatgatggaaaaacc 302 |||||||||||||||||||| Sbjct: 350 gattggatgatggaaaaacc 369
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 165 bits (83), Expect = 1e-37 Identities = 89/91 (97%) Strand = Plus / Plus Query: 230 aacaagggttttcatcaaaagaaatccgaagcggtttcattcgatttgttgtggattgga 289 |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 31048153 aacaagagttttcatcaaaagaaatccgaagcagtttcattcgatttgttgtggattgga 31048212 Query: 290 tgatggaaaaaccagcaagcagcaagcgtag 320 ||||||||||||||||||||||||||||||| Sbjct: 31048213 tgatggaaaaaccagcaagcagcaagcgtag 31048243 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 80 atccatggatctccgatcgggaaaccgta 108 |||||||||||||||||| ||||| |||| Sbjct: 542381 atccatggatctccgatcaggaaagcgta 542409
>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01 genomic sequence, complete sequence Length = 168759 Score = 165 bits (83), Expect = 1e-37 Identities = 89/91 (97%) Strand = Plus / Minus Query: 230 aacaagggttttcatcaaaagaaatccgaagcggtttcattcgatttgttgtggattgga 289 |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 47911 aacaagagttttcatcaaaagaaatccgaagcagtttcattcgatttgttgtggattgga 47852 Query: 290 tgatggaaaaaccagcaagcagcaagcgtag 320 ||||||||||||||||||||||||||||||| Sbjct: 47851 tgatggaaaaaccagcaagcagcaagcgtag 47821
>gb|DQ008799.1| Asarum canadense large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3403 Score = 165 bits (83), Expect = 1e-37 Identities = 92/95 (96%) Strand = Plus / Plus Query: 136 tttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaa 195 |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 59 tttggactttgaaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatcaa 118 Query: 196 ccgagaccccgttagtagcggcgagcgagagcgga 230 ||||||||||||||||||||||||||||||||||| Sbjct: 119 ccgagaccccgttagtagcggcgagcgagagcgga 153 Score = 101 bits (51), Expect = 2e-18 Identities = 51/51 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagc 312 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagc 281 Score = 54.0 bits (27), Expect = 4e-04 Identities = 37/39 (94%), Gaps = 1/39 (2%) Strand = Plus / Plus Query: 88 atctccgatcgggaaaccgtatccaagctccgtggctag 126 ||||||||||||||| ||| ||||||||||||||||||| Sbjct: 1 atctccgatcgggaacccg-atccaagctccgtggctag 38
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 165 bits (83), Expect = 1e-37 Identities = 89/91 (97%) Strand = Plus / Plus Query: 230 aacaagggttttcatcaaaagaaatccgaagcggtttcattcgatttgttgtggattgga 289 |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 31138676 aacaagagttttcatcaaaagaaatccgaagcagtttcattcgatttgttgtggattgga 31138735 Query: 290 tgatggaaaaaccagcaagcagcaagcgtag 320 ||||||||||||||||||||||||||||||| Sbjct: 31138736 tgatggaaaaaccagcaagcagcaagcgtag 31138766 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 80 atccatggatctccgatcgggaaaccgta 108 |||||||||||||||||| ||||| |||| Sbjct: 542379 atccatggatctccgatcaggaaagcgta 542407
>gb|DQ008824.1| Schisandra sphenanthera large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3658 Score = 163 bits (82), Expect = 6e-37 Identities = 85/86 (98%) Strand = Plus / Plus Query: 145 ttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccc 204 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1 ttcaaacttagcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccc 60 Query: 205 cgttagtagcggcgagcgagagcgga 230 |||||||||||||||||||||||||| Sbjct: 61 cgttagtagcggcgagcgagagcgga 86 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaacc 302 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 ggtttcattcgatttgttgtggattggatgatggaaaaacc 614
>emb|AL954156.3|CNS08CCU Oryza sativa chromosome 12, . BAC OSJNBa0096K13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 138508 Score = 155 bits (78), Expect = 1e-34 Identities = 115/126 (91%), Gaps = 1/126 (0%) Strand = Plus / Plus Query: 132 gctctttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaa 191 |||||||| |||||||||||||||||||||| ||||| |||| |||||||||||||||| Sbjct: 45717 gctctttgaacttttcaaacttagcgaactggaacatatgaggtgctaaaggaaggaaaa 45776 Query: 192 tcaaccgagaccccgttagtagcggcgagcgagagcggaacaagggttttcatcaaaaga 251 |||||||||| ||||| |||| |||||||||||| ||||| |||||||||||||||||| Sbjct: 45777 tcaaccgaga-cccgtcagtaacggcgagcgagaacggaatgagggttttcatcaaaaga 45835 Query: 252 aatccg 257 |||||| Sbjct: 45836 aatccg 45841
>gb|DQ008797.1| Thottea tomentosa large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 2949 Score = 151 bits (76), Expect = 2e-33 Identities = 79/80 (98%) Strand = Plus / Plus Query: 151 cttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttag 210 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1 cttagcgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgttag 60 Query: 211 tagcggcgagcgagagcgga 230 |||||||||||||||||||| Sbjct: 61 tagcggcgagcgagagcgga 80 Score = 95.6 bits (48), Expect = 1e-16 Identities = 54/56 (96%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 317 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 ggtttcattctttttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 263
>gb|DQ008762.1| Sargentodoxa cuneata large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 2843 Score = 147 bits (74), Expect = 4e-32 Identities = 80/82 (97%) Strand = Plus / Plus Query: 149 aacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgtt 208 |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1 aacttagcgaaccgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgtt 60 Query: 209 agtagcggcgagcgagagcgga 230 |||||||||||||||||||||| Sbjct: 61 agtagcggcgagcgagagcgga 82 Score = 111 bits (56), Expect = 2e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 236
>emb|AL731758.4|CNS08C87 Oryza sativa chromosome 12, . BAC OSJNBa0029K06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 154442 Score = 147 bits (74), Expect = 4e-32 Identities = 74/74 (100%) Strand = Plus / Plus Query: 242 catcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaac 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127429 catcaaaagaaatccgaagcggtttcattcgatttgttgtggattggatgatggaaaaac 127488 Query: 302 cagcaagcagcaag 315 |||||||||||||| Sbjct: 127489 cagcaagcagcaag 127502
>gb|DQ008791.1| Anemopsis californica large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3326 Score = 141 bits (71), Expect = 2e-30 Identities = 74/75 (98%) Strand = Plus / Plus Query: 156 cgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcg 215 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 cgaactgaaacatctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcg 60 Query: 216 gcgagcgagagcgga 230 ||||||||||||||| Sbjct: 61 gcgagcgagagcgga 75 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 192
>dbj|AB251495.1| Physcomitrella patens mitochondrial DNA, complete genome Length = 105340 Score = 139 bits (70), Expect = 9e-30 Identities = 88/94 (93%) Strand = Plus / Plus Query: 137 ttggacttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaac 196 |||||||||| ||||||||||||||||||||||| |||||||||||||| | |||||||| Sbjct: 34726 ttggacttttaaaacttagcgaactgaaacatctaagtagctaaaggaaaggaaatcaac 34785 Query: 197 cgagaccccgttagtagcggcgagcgagagcgga 230 |||||| |||||||||||||||||||| |||||| Sbjct: 34786 cgagactccgttagtagcggcgagcgaaagcgga 34819 Score = 121 bits (61), Expect = 2e-24 Identities = 98/109 (89%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 7 ggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggggag 66 ||||| ||||| |||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 34587 ggatgaatgcctaggcattgagaaggaaggacgctttcaagggcgaaacgccatggggag 34646 Query: 67 atatgaatctgtgatccatggatctccgatcgggaaaccgtatccaagc 115 ||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 34647 ata-ccgtctgtgatccatggatctccaatcgggaaaccgtatccaagc 34694
>gb|M68929.1|MPOMTCG Marchantia polymorpha mitochondrion, complete genome Length = 186609 Score = 135 bits (68), Expect = 1e-28 Identities = 102/112 (91%), Gaps = 1/112 (0%) Strand = Plus / Minus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||| |||||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 150353 attggatggatgcctaggcattgagaaggatggacgctttcaaaggcgaaacgccatggg 150294 Query: 64 gagatatgaatctgtgatccatggatctccgatcgggaaaccgtatccaagc 115 ||||||| |||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 150293 gagatat-cgtctgtgatccatgggtctccaatcgggaaaccgtatccaagc 150243 Score = 117 bits (59), Expect = 3e-23 Identities = 71/75 (94%) Strand = Plus / Minus Query: 149 aacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgtt 208 |||||||||||||||||||||| |||||||||||||| | |||||||||||||| ||||| Sbjct: 150198 aacttagcgaactgaaacatctaagtagctaaaggaaaggaaatcaaccgagactccgtt 150139 Query: 209 agtagcggcgagcga 223 ||||||||||||||| Sbjct: 150138 agtagcggcgagcga 150124 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 265 ttcattcgatttgttgtggattggatgatggaaaaacca 303 |||||||||||||||| | |||| ||||||||||||||| Sbjct: 150105 ttcattcgatttgttgagaattgaatgatggaaaaacca 150067
>gb|DQ008818.1| Acorus gramineus large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 2523 Score = 135 bits (68), Expect = 1e-28 Identities = 83/88 (94%) Strand = Plus / Plus Query: 143 ttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagac 202 ||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 92 ttttctaacttagcgaactgaaacatctaagtagctaaaggaagggaaatcaaccgagac 151 Query: 203 cccgttagtagcggcgagcgagagcgga 230 |||| |||||||||||||||||||||| Sbjct: 152 tccgtgagtagcggcgagcgagagcgga 179 Score = 91.7 bits (46), Expect = 2e-15 Identities = 74/82 (90%), Gaps = 1/82 (1%) Strand = Plus / Plus Query: 29 aaggaaggacgctttcagaggcgaaaggccatggggagatatgaatctgtgatccatgga 88 ||||| ||||||||||| ||||||||||||||||| |||| | ||||||||||||||| Sbjct: 1 aaggatggacgctttcataggcgaaaggccatgggtagatctcg-tctgtgatccatgga 59 Query: 89 tctccgatcgggaaaccgtatc 110 ||||| |||||||||||||||| Sbjct: 60 tctcctatcgggaaaccgtatc 81
>gb|DQ008817.1| Acorus calamus large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 2485 Score = 135 bits (68), Expect = 1e-28 Identities = 83/88 (94%) Strand = Plus / Plus Query: 143 ttttcaaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagac 202 ||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 78 ttttctaacttagcgaactgaaacatctaagtagctaaaggaagggaaatcaaccgagac 137 Query: 203 cccgttagtagcggcgagcgagagcgga 230 |||| |||||||||||||||||||||| Sbjct: 138 tccgtgagtagcggcgagcgagagcgga 165 Score = 71.9 bits (36), Expect = 2e-09 Identities = 58/64 (90%), Gaps = 1/64 (1%) Strand = Plus / Plus Query: 47 aggcgaaaggccatggggagatatgaatctgtgatccatggatctccgatcgggaaaccg 106 ||||||||||||||||| |||| | |||||||||||||||||||| |||||||||||| Sbjct: 5 aggcgaaaggccatgggtagatctcg-tctgtgatccatggatctcctatcgggaaaccg 63 Query: 107 tatc 110 |||| Sbjct: 64 tatc 67
>gb|DQ008779.1| Siparuna decipiens large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 2316 Score = 127 bits (64), Expect = 3e-26 Identities = 67/68 (98%) Strand = Plus / Plus Query: 163 aaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcg 222 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1 aaacatctgagtagctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcg 60 Query: 223 agagcgga 230 |||||||| Sbjct: 61 agagcgga 68 Score = 111 bits (56), Expect = 2e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagcg 192
>gb|AC146940.19| Medicago truncatula clone mth2-132l6, complete sequence Length = 125567 Score = 119 bits (60), Expect = 8e-24 Identities = 60/60 (100%) Strand = Plus / Minus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25127 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 25068
>gb|AC138017.15| Medicago truncatula clone mth2-6i3, complete sequence Length = 129585 Score = 119 bits (60), Expect = 8e-24 Identities = 60/60 (100%) Strand = Plus / Plus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100388 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaaggccatggg 100447
>gb|DQ008793.1| Houttuynia cordata large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3212 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 134
>gb|DQ008782.1| Idiospermum australiense large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3325 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 157 Score = 83.8 bits (42), Expect = 4e-13 Identities = 42/42 (100%) Strand = Plus / Plus Query: 189 aaatcaaccgagaccccgttagtagcggcgagcgagagcgga 230 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aaatcaaccgagaccccgttagtagcggcgagcgagagcgga 42
>gb|DQ008780.1| Calycanthus floridus large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3357 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 105
>gb|DQ008776.1| Daphnandra micrantha large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 2644 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 129
>gb|DQ008768.1| Peumus boldus large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 1491 Score = 109 bits (55), Expect = 8e-21 Identities = 55/55 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 316 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 127
>gb|DQ008833.1| Gnetum gnemon large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 4055 Score = 105 bits (53), Expect = 1e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 ||||||||||||||||| |||||||| ||||| | |||||||||||||||||||||||| Sbjct: 1 agcgaactgaaacatctaagtagctagaggaacggcaatcaaccgagaccccgttagtag 60 Query: 214 cggcgagcgagagcgga 230 |||||||||| |||||| Sbjct: 61 cggcgagcgaaagcgga 77
>gb|DQ008767.1| Ceratophyllum submersum large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3375 Score = 103 bits (52), Expect = 5e-19 Identities = 55/56 (98%) Strand = Plus / Plus Query: 175 agctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 230 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agctaaaggaagggaaatcaaccgagaccccgttagtagcggcgagcgagagcgga 56 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 282 ggattggatgatggaaaaaccagcaagcagcaag 315 ||||||||||||||||||||| |||||||||||| Sbjct: 300 ggattggatgatggaaaaacctgcaagcagcaag 333
>gb|AY267353.1| Chara vulgaris mitochondrion, complete genome Length = 67737 Score = 99.6 bits (50), Expect = 7e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 150 acttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgtta 209 ||||||||||||||||||||| |||||||||||||| | | |||||||||||| |||||| Sbjct: 305 acttagcgaactgaaacatctaagtagctaaaggaaagcacatcaaccgagactccgtta 364 Query: 210 gtagcggcgagcga 223 |||| ||||||||| Sbjct: 365 gtagtggcgagcga 378 Score = 48.1 bits (24), Expect = 0.024 Identities = 86/104 (82%), Gaps = 2/104 (1%) Strand = Plus / Plus Query: 4 attggatggatgcccgggcattgagaaggaa-ggacgctttcagaggcgaaaggccatgg 62 ||||| |||||||| ||||||||||| ||| |||||| | | |||||||| ||||||| Sbjct: 191 attgggtggatgccttggcattgagaaagaaaggacgcaatgaaaggcgaaacgccatgg 250 Query: 63 ggagatatgaatctgtgatccatggatctccgatcgggaaaccg 106 ||||| | ||| |||||||||||| ||| |||||||||||| Sbjct: 251 ggaga-agctctctttgatccatggatttcctatcgggaaaccg 293
>gb|AF494279.1| Chaetosphaeridium globosum mitochondrial DNA, complete genome Length = 56574 Score = 99.6 bits (50), Expect = 7e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 150 acttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgtta 209 ||||||||||||||||||||| |||||||||||||| | ||||||| |||||| |||||| Sbjct: 1029 acttagcgaactgaaacatctaagtagctaaaggaaaggaaatcaaacgagactccgtta 1088 Query: 210 gtagcggcgagcga 223 |||| ||||||||| Sbjct: 1089 gtagtggcgagcga 1102
>gb|DQ008837.1| Podocarpus macrophyllus large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3014 Score = 99.6 bits (50), Expect = 7e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||||||| ||||| | ||||||||||||||||||||||||||| Sbjct: 1 gaactgaaacatctaagtagctagaggaaagggaatcaaccgagaccccgttagtagcgg 60 Query: 217 cgagcgagagcgga 230 ||||||| |||||| Sbjct: 61 cgagcgaaagcgga 74
>gb|AF110138.1|AF110138 Nephroselmis olivacea mitochondrion, complete genome Length = 45223 Score = 99.6 bits (50), Expect = 7e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 149 aacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgtt 208 ||||| |||||||||||||||| |||||| ||||||| | |||||||||||||| ||||| Sbjct: 184 aactttgcgaactgaaacatctaagtagcaaaaggaaaggaaatcaaccgagactccgtt 243 Query: 209 agtagcggcgagcgagagcgga 230 ||||| ||||||||| |||||| Sbjct: 244 agtagtggcgagcgaaagcgga 265
>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0468B07 Length = 169071 Score = 97.6 bits (49), Expect = 3e-17 Identities = 52/53 (98%) Strand = Plus / Plus Query: 119 gtggctagtctgcgctctttggacttttcaaacttagcgaactgaaacatctg 171 ||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 48502 gtggctagtctgcgctctttggacttttcaaacttagcgaactaaaacatctg 48554
>gb|AF497445.1| Gossypium hirsutum clone D1A01 unknown chloroplast sequence Length = 477 Score = 93.7 bits (47), Expect = 5e-16 Identities = 51/53 (96%) Strand = Plus / Plus Query: 4 attggatggatgcccgggcattgagaaggaaggacgctttcagaggcgaaagg 56 |||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 403 attggatggatgcccgggcattganaaggaaggacgctntcagaggcgaaagg 455
>gb|DQ008795.1| Piper betle large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3159 Score = 93.7 bits (47), Expect = 5e-16 Identities = 54/55 (98%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 263 gtttcattcgattt-gttgtggattggatgatggaaaaaccagcaagcagcaagc 316 |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 245 gtttcattcgattttgttgtggattggatgatggaaaaaccagcaagcagcaagc 299
>gb|DQ008771.1| Hernandia ovigera large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 2503 Score = 93.7 bits (47), Expect = 5e-16 Identities = 54/55 (98%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 316 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 28 ggtttcattcgatttgttgtggattggatgatgg-aaaaccagcaagcagcaagc 81
>gb|DQ008834.1| Welwitschia mirabilis large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3363 Score = 89.7 bits (45), Expect = 7e-15 Identities = 69/77 (89%) Strand = Plus / Plus Query: 155 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 214 ||||||||||||||| ||||||| ||||||| |||||||||||||||||| |||||| Sbjct: 1 gcgaactgaaacatcgttgtagctagaggaagggcaatcaaccgagaccccgtgagtagc 60 Query: 215 ggcgagcgagagcggaa 231 ||||||||| ||||||| Sbjct: 61 ggcgagcgaaagcggaa 77
>gb|DQ008821.1| Ascarina rubricaulis large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 1631 Score = 89.7 bits (45), Expect = 7e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagca 310 ||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 58 ggtttcattcgatttcttgtggattggatgatggaaaaaccagcaagca 106
>gb|DQ008822.1| Hedyosmum arborescens large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 2891 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaaccagcaagcagcaagc 316 |||||||||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 27 ggtttcattctatttcttgtggattggatgatggaaaaaccagcaagctgcaagc 81
>gb|DQ008832.1| Amborella trichopoda large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3368 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaacc 302 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 283 ggtttcattcgatttgttgtggattggatgatggaaaaacc 323
>gb|DQ008826.1| Trimenia moorei large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3041 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaacc 302 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ggtttcattcgatttgttgtggattggatgatggaaaaacc 756 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 206 gttagtagcggcgagcgagagcgga 230 |||| |||||||||||||||||||| Sbjct: 1 gttattagcggcgagcgagagcgga 25
>gb|DQ008825.1| Illicium floridanum large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3025 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaacc 302 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 266 ggtttcattcgatttgttgtggattggatgatggaaaaacc 306
>gb|DQ008823.1| Kadsura japonica large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3585 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaaaacc 302 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 504 ggtttcattcgatttgttgtggattggatgatggaaaaacc 544
>gb|AF295546.1| Malawimonas jakobiformis mitochondrial DNA, complete genome Length = 47328 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 148 aaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgaga 201 |||||||| |||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 25790 aaacttagtgaactgaaacatctaagtagctaaaggaataaaaatcaaccgaga 25737 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 148 aaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgaga 201 |||||||| |||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 221 aaacttagtgaactgaaacatctaagtagctaaaggaataaaaatcaaccgaga 274
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 73.8 bits (37), Expect = 4e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 155 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 214 |||||||||||||||| |||||| ||||| | |||||||||||||| |||||||||| Sbjct: 3809743 gcgaactgaaacatctaagtagccggaggaaaggaaatcaaccgagactccgttagtagt 3809684 Query: 215 ggcgagcga 223 ||||||||| Sbjct: 3809683 ggcgagcga 3809675 Score = 73.8 bits (37), Expect = 4e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 155 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 214 |||||||||||||||| |||||| ||||| | |||||||||||||| |||||||||| Sbjct: 2734695 gcgaactgaaacatctaagtagccggaggaaaggaaatcaaccgagactccgttagtagt 2734636 Query: 215 ggcgagcga 223 ||||||||| Sbjct: 2734635 ggcgagcga 2734627 Score = 73.8 bits (37), Expect = 4e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 155 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 214 |||||||||||||||| |||||| ||||| | |||||||||||||| |||||||||| Sbjct: 913826 gcgaactgaaacatctaagtagccggaggaaaggaaatcaaccgagactccgttagtagt 913885 Query: 215 ggcgagcga 223 ||||||||| Sbjct: 913886 ggcgagcga 913894 Score = 73.8 bits (37), Expect = 4e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 155 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 214 |||||||||||||||| |||||| ||||| | |||||||||||||| |||||||||| Sbjct: 194959 gcgaactgaaacatctaagtagccggaggaaaggaaatcaaccgagactccgttagtagt 195018 Query: 215 ggcgagcga 223 ||||||||| Sbjct: 195019 ggcgagcga 195027
>emb|X87290.1|RR23S170S R.rubrum 23S rRNA gene Length = 2759 Score = 73.8 bits (37), Expect = 4e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 155 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 214 |||||||||||||||| |||||| ||||| | |||||||||||||| |||||||||| Sbjct: 191 gcgaactgaaacatctaagtagccggaggaaaggaaatcaaccgagactccgttagtagt 250 Query: 215 ggcgagcga 223 ||||||||| Sbjct: 251 ggcgagcga 259
>gb|DQ313043.1| Uncultured bacterium clone 3P9C 23S ribosomal RNA gene, partial sequence Length = 732 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| || |||||| | | |||||||||||| |||||||||| || Sbjct: 22 gaactgaaacatcttagtacctgaaggaaaggacatcaaccgagactccgttagtagtgg 81 Query: 217 cgagcga 223 ||||||| Sbjct: 82 cgagcga 88
>gb|DQ312907.1| Uncultured bacterium clone 3L5F 23S ribosomal RNA gene, partial sequence Length = 317 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| || |||||| | | |||||||||||| |||||||||| || Sbjct: 71 gaactgaaacatcttagtacctgaaggaaaggacatcaaccgagactccgttagtagtgg 130 Query: 217 cgagcga 223 ||||||| Sbjct: 131 cgagcga 137
>gb|DQ312820.1| Uncultured bacterium clone 3I2E 23S ribosomal RNA gene, partial sequence Length = 406 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||||| ||||| | | |||||||||||| ||||||||||||| Sbjct: 159 gaactgaaacatctaagtagccggaggaaaggacatcaaccgagactccgttagtagcgg 218 Query: 217 cgagcga 223 ||||||| Sbjct: 219 cgagcga 225
>gb|DQ312816.1| Uncultured bacterium clone 3I1B 23S ribosomal RNA gene, partial sequence Length = 317 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| || |||||| | | |||||||||||| |||||||||| || Sbjct: 71 gaactgaaacatcttagtacctgaaggaaaggacatcaaccgagactccgttagtagtgg 130 Query: 217 cgagcga 223 ||||||| Sbjct: 131 cgagcga 137
>gb|DQ312540.1| Uncultured bacterium clone 3A7F 23S ribosomal RNA gene, partial sequence Length = 305 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| || |||||| | | |||||||||||| |||||||||| || Sbjct: 70 gaactgaaacatcttagtacctgaaggaaaggacatcaaccgagactccgttagtagtgg 129 Query: 217 cgagcga 223 ||||||| Sbjct: 130 cgagcga 136
>gb|AY309486.1| Unknown marine alpha proteobacterium JP66.1 23S ribosomal RNA gene, partial sequence Length = 2536 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| | | ||||| | | |||||||||||| ||||||||||||| Sbjct: 199 gaactgaaacatctaagtacccataggaaaggacatcaaccgagactccgttagtagcgg 258 Query: 217 cgagcga 223 ||||||| Sbjct: 259 cgagcga 265
>emb|AJ879829.1| Uncultured organism 23S rRNA gene, clone LP4-147 Length = 446 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| || ||||| | |||||||||||||| |||| |||||||| Sbjct: 117 gaactgaaacatctcagtacctgcaggaaaggaaatcaaccgagactccgtcagtagcgg 176 Query: 217 cgagcga 223 ||||||| Sbjct: 177 cgagcga 183
>gb|AY033325.1| Uncultured alpha proteobacteria MB13F01 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3663 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 153 tagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagta 212 |||||||||||||||||| |||| ||| ||||| | | ||||||||| || |||| |||| Sbjct: 2065 tagcgaactgaaacatctaagtaactagaggaaaggatatcaaccgatactccgtaagta 2124 Query: 213 gcggcgagcgagagcgga 230 | ||||||||| |||||| Sbjct: 2125 gtggcgagcgaaagcgga 2142
>gb|AF410947.1| Bartonella weissi 23S ribosomal RNA gene, partial sequence Length = 2449 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| || ||||||| | ||||| |||||| |||||||||| || Sbjct: 114 gaactgaaacatctaagtacctgtaggaagggacatcaaacgagactccgttagtagtgg 173 Query: 217 cgagcgagagcgga 230 ||||||| |||||| Sbjct: 174 cgagcgaaagcgga 187
>gb|AY458646.2| Uncultured bacterium 578 clone EBAC080-L31E09 genomic sequence Length = 78078 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 147 caaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccg 206 ||||| ||| |||||||||||||| |||| ||| ||||| ||||||||||||| || Sbjct: 70791 caaacctagggaactgaaacatctaagtacctagaggaaaagaaatcaaccgagattccc 70732 Query: 207 ttagtagcggcgagcga 223 ||||||||||||||||| Sbjct: 70731 ttagtagcggcgagcga 70715
>emb|AM085146.1| Magnetospirillum gryphiswaldense magnetosome island Length = 130000 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 155 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 214 |||||||||||||||| |||||| ||||| | | |||||||||||| |||||||||| Sbjct: 6662 gcgaactgaaacatctaagtagcccgaggaaaggacatcaaccgagactccgttagtagt 6721 Query: 215 ggcgagcga 223 ||||||||| Sbjct: 6722 ggcgagcga 6730
>gb|AE016828.2| Coxiella burnetii RSA 493, complete genome Length = 1995281 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| | | ||||| ||||||||||||| |||| |||||||| Sbjct: 167761 gaactgaaacatctaagtacccagaggaaaagaaatcaaccgagattccgtcagtagcgg 167820 Query: 217 cgagcgagagcggaaca 233 ||||||| ||||||||| Sbjct: 167821 cgagcgaaagcggaaca 167837
>gb|DQ313103.1| Uncultured bacterium clone 3S12H 23S ribosomal RNA gene, partial sequence Length = 824 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 ||||||||||||||||| ||||||| ||||| | | ||||||||| || |||| ||||| Sbjct: 20 agcgaactgaaacatctaagtagctggaggaaaggatatcaaccgatactccgtaagtag 79 Query: 214 cggcgagcgagagcgga 230 ||||||||| |||||| Sbjct: 80 tggcgagcgaaagcgga 96
>gb|DQ313086.1| Uncultured bacterium clone 3R4A 23S ribosomal RNA gene, partial sequence Length = 689 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 ||||||||||||||||| ||||||| ||||| | | ||||||||| || |||| ||||| Sbjct: 20 agcgaactgaaacatctaagtagctggaggaaaggatatcaaccgatactccgtaagtag 79 Query: 214 cggcgagcgagagcgga 230 ||||||||| |||||| Sbjct: 80 tggcgagcgaaagcgga 96
>gb|DQ313024.1| Uncultured bacterium clone 3P2A 23S ribosomal RNA gene, partial sequence Length = 777 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 ||||||||||||||||| ||||||| ||||| | | ||||||||| || |||| ||||| Sbjct: 20 agcgaactgaaacatctaagtagctggaggaaaggatatcaaccgatactccgtaagtag 79 Query: 214 cggcgagcgagagcgga 230 ||||||||| |||||| Sbjct: 80 tggcgagcgaaagcgga 96
>gb|DQ312929.1| Uncultured bacterium clone 3M12D 23S ribosomal RNA gene, partial sequence Length = 717 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 155 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 214 |||||||||||||||| |||||| ||||| | | |||||||||||| |||||||||| Sbjct: 20 gcgaactgaaacatctaagtagccggaggaaaggacatcaaccgagactccgttagtagt 79 Query: 215 ggcgagcga 223 ||||||||| Sbjct: 80 ggcgagcga 88
>gb|DQ312910.1| Uncultured bacterium clone 3L7B 23S ribosomal RNA gene, partial sequence Length = 768 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 ||||||||||||||||| ||||||| ||||| | | ||||||||| || |||| ||||| Sbjct: 11 agcgaactgaaacatctaagtagctggaggaaaggatatcaaccgatactccgtaagtag 70 Query: 214 cggcgagcgagagcgga 230 ||||||||| |||||| Sbjct: 71 tggcgagcgaaagcgga 87
>gb|DQ312904.1| Uncultured bacterium clone 3L2H 23S ribosomal RNA gene, partial sequence Length = 717 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 ||||||||||||||||| ||||||| ||||| | | ||||||||| || |||| ||||| Sbjct: 20 agcgaactgaaacatctaagtagctggaggaaaggatatcaaccgatactccgtaagtag 79 Query: 214 cggcgagcgagagcgga 230 ||||||||| |||||| Sbjct: 80 tggcgagcgaaagcgga 96
>gb|DQ312815.1| Uncultured bacterium clone 3I12G 23S ribosomal RNA gene, partial sequence Length = 692 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 ||||||||||||||||| ||||||| ||||| | | ||||||||| || |||| ||||| Sbjct: 11 agcgaactgaaacatctaagtagctggaggaaaggatatcaaccgatactccgtaagtag 70 Query: 214 cggcgagcgagagcgga 230 ||||||||| |||||| Sbjct: 71 tggcgagcgaaagcgga 87
>gb|DQ312654.1| Uncultured bacterium clone 3D12E 23S ribosomal RNA gene, partial sequence Length = 282 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 ||||||||||||||||| ||||||| ||||| | | ||||||||| || |||| ||||| Sbjct: 67 agcgaactgaaacatctaagtagctggaggaaaggatatcaaccgatactccgtaagtag 126 Query: 214 cggcgagcgagagcgga 230 ||||||||| |||||| Sbjct: 127 tggcgagcgaaagcgga 143
>gb|DQ312652.1| Uncultured bacterium clone 3D12A 23S ribosomal RNA gene, partial sequence Length = 777 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 ||||||||||||||||| ||||||| ||||| | | ||||||||| || |||| ||||| Sbjct: 20 agcgaactgaaacatctaagtagctggaggaaaggatatcaaccgatactccgtaagtag 79 Query: 214 cggcgagcgagagcgga 230 ||||||||| |||||| Sbjct: 80 tggcgagcgaaagcgga 96
>gb|DQ312619.1| Uncultured bacterium clone 3C3B 23S ribosomal RNA gene, partial sequence Length = 693 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 ||||||||||||||||| ||||||| ||||| | | ||||||||| || |||| ||||| Sbjct: 21 agcgaactgaaacatctaagtagctggaggaaaggatatcaaccgatactccgtaagtag 80 Query: 214 cggcgagcgagagcgga 230 ||||||||| |||||| Sbjct: 81 tggcgagcgaaagcgga 97
>gb|DQ312617.1| Uncultured bacterium clone 3C2H 23S ribosomal RNA gene, partial sequence Length = 320 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 ||||||||||||||||| ||||||| ||||| | | ||||||||| || |||| ||||| Sbjct: 67 agcgaactgaaacatctaagtagctggaggaaaggatatcaaccgatactccgtaagtag 126 Query: 214 cggcgagcgagagcgga 230 ||||||||| |||||| Sbjct: 127 tggcgagcgaaagcgga 143
>gb|DQ312598.1| Uncultured bacterium clone 3B9C 23S ribosomal RNA gene, partial sequence Length = 608 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 ||||||||||||||||| ||||||| ||||| | | ||||||||| || |||| ||||| Sbjct: 21 agcgaactgaaacatctaagtagctggaggaaaggatatcaaccgatactccgtaagtag 80 Query: 214 cggcgagcgagagcgga 230 ||||||||| |||||| Sbjct: 81 tggcgagcgaaagcgga 97
>gb|DQ312581.1| Uncultured bacterium clone 3B5H 23S ribosomal RNA gene, partial sequence Length = 701 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 ||||||||||||||||| ||||||| ||||| | | ||||||||| || |||| ||||| Sbjct: 21 agcgaactgaaacatctaagtagctggaggaaaggatatcaaccgatactccgtaagtag 80 Query: 214 cggcgagcgagagcgga 230 ||||||||| |||||| Sbjct: 81 tggcgagcgaaagcgga 97
>gb|DQ312534.1| Uncultured bacterium clone 3A3H 23S ribosomal RNA gene, partial sequence Length = 307 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 ||||||||||||||||| ||||||| ||||| | | ||||||||| || |||| ||||| Sbjct: 68 agcgaactgaaacatctaagtagctggaggaaaggatatcaaccgatactccgtaagtag 127 Query: 214 cggcgagcgagagcgga 230 ||||||||| |||||| Sbjct: 128 tggcgagcgaaagcgga 144
>gb|DQ008827.1| Austrobaileya scandens large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3968 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 262 ggtttcattcgatttgttgtggattggatgatggaaa 298 |||||||||||||||||||| |||||||||||||||| Sbjct: 550 ggtttcattcgatttgttgttgattggatgatggaaa 586
>gb|AY744396.1| Uncultured proteobacterium RedeBAC7D11 contig 0, complete sequence Length = 61985 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| || ||||| ||||||||||||| | ||||||||||| Sbjct: 45396 gaactgaaacatctaagtaactgcaggaaaagaaatcaaccgagattctgttagtagcgg 45337 Query: 217 cgagcgagagcggaaca 233 ||||||| ||||||||| Sbjct: 45336 cgagcgaaagcggaaca 45320
>emb|BX897700.1| Bartonella quintana str. Toulouse, complete genome Length = 1581384 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| || ||||| | | |||||||||||| |||||||||| || Sbjct: 1294582 gaactgaaacatctaagtacctgtaggaaaggacatcaaccgagactccgttagtagtgg 1294523 Query: 217 cgagcga 223 ||||||| Sbjct: 1294522 cgagcga 1294516 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| || ||||| | | |||||||||||| |||||||||| || Sbjct: 1175868 gaactgaaacatctaagtacctgtaggaaaggacatcaaccgagactccgttagtagtgg 1175809 Query: 217 cgagcga 223 ||||||| Sbjct: 1175808 cgagcga 1175802
>gb|DQ414689.1| Caedibacter caryophilus 23S ribosomal RNA gene, partial sequence Length = 2949 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| ||||||| ||||| | |||||||||||| |||||||||| || Sbjct: 2 gaactgaaacatctaagtagctcgaggaaaagacatcaaccgagactccgttagtagtgg 61 Query: 217 cgagcga 223 ||||||| Sbjct: 62 cgagcga 68
>gb|DQ313094.1| Uncultured bacterium clone 3R7H 23S ribosomal RNA gene, partial sequence Length = 829 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| | | ||||| | | |||||||||||| |||||||||| || Sbjct: 23 gaactgaaacatctaagtacccagaggaaaggacatcaaccgagactccgttagtagtgg 82 Query: 217 cgagcga 223 ||||||| Sbjct: 83 cgagcga 89
>gb|DQ312828.1| Uncultured bacterium clone 3I7D 23S ribosomal RNA gene, partial sequence Length = 760 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| | | ||||| | | |||||||||||| |||||||||| || Sbjct: 23 gaactgaaacatctaagtacccagaggaaaggacatcaaccgagactccgttagtagtgg 82 Query: 217 cgagcga 223 ||||||| Sbjct: 83 cgagcga 89
>gb|DQ312810.1| Uncultured bacterium clone 3I10A 23S ribosomal RNA gene, partial sequence Length = 313 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| | | ||||| | | |||||||||||| |||||||||| || Sbjct: 69 gaactgaaacatctaagtacccagaggaaaggacatcaaccgagactccgttagtagtgg 128 Query: 217 cgagcga 223 ||||||| Sbjct: 129 cgagcga 135
>gb|DQ312651.1| Uncultured bacterium clone 3D11H 23S ribosomal RNA gene, partial sequence Length = 746 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| | | ||||| | | |||||||||||| |||||||||| || Sbjct: 23 gaactgaaacatctaagtacccagaggaaaggacatcaaccgagactccgttagtagtgg 82 Query: 217 cgagcga 223 ||||||| Sbjct: 83 cgagcga 89
>gb|DQ312628.1| Uncultured bacterium clone 3C5E 23S ribosomal RNA gene, partial sequence Length = 279 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| | | ||||| | | |||||||||||| |||||||||| || Sbjct: 68 gaactgaaacatctaagtacccagaggaaaggacatcaaccgagactccgttagtagtgg 127 Query: 217 cgagcga 223 ||||||| Sbjct: 128 cgagcga 134
>gb|AF208483.1|AF208483 Agrobacterium rubi 23S ribosomal RNA gene, partial sequence Length = 2373 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| || |||||| | | |||||||||||| |||| ||||| || Sbjct: 153 gaactgaaacatctaagtacctgaaggaaaggacatcaaccgagactccgtaagtagtgg 212 Query: 217 cgagcga 223 ||||||| Sbjct: 213 cgagcga 219
>gb|U02970.1|PWU02970 Prototheca wickerhamii 263-11 complete mitochondrial DNA Length = 55328 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 161 tgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgag 220 |||||||||| |||| ||| ||||| |||||||||||||| |||||||||| || ||| Sbjct: 49048 tgaaacatcttagtaactagaggaatagaaatcaaccgagactccgttagtagtggtgag 49107 Query: 221 cgagagcggaa 231 ||| ||||||| Sbjct: 49108 cgaaagcggaa 49118
>gb|AY484593.1| Bartonella quintana 23S ribosomal RNA gene, partial sequence Length = 2450 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| || ||||| | | |||||||||||| |||||||||| || Sbjct: 116 gaactgaaacatctaagtacctgtaggaaaggacatcaaccgagactccgttagtagtgg 175 Query: 217 cgagcga 223 ||||||| Sbjct: 176 cgagcga 182
>gb|L39095.1|BAORG23S Bartonella bacilliformis 23S ribosomal RNA (23S rRNA) gene Length = 2821 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| || ||||| | | |||||||||||| |||||||||| || Sbjct: 244 gaactgaaacatctaagtacctgtaggaaaggacatcaaccgagactccgttagtagtgg 303 Query: 217 cgagcga 223 ||||||| Sbjct: 304 cgagcga 310
>emb|X68722.1|PWMLSURRN P.wickerhamii mitochondrial gene for large ribosomal RNA Length = 4059 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 161 tgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcggcgag 220 |||||||||| |||| ||| ||||| |||||||||||||| |||||||||| || ||| Sbjct: 321 tgaaacatcttagtaactagaggaatagaaatcaaccgagactccgttagtagtggtgag 380 Query: 221 cgagagcggaa 231 ||| ||||||| Sbjct: 381 cgaaagcggaa 391
>emb|X76084.1|CHNERRNA N.eucaryotum chloroplast 16S rRNA, tRNA-Ile, tRNA-Ala and 23S rRNA genes Length = 5431 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 148 aaacttagcgaactgaaacatctgagtagctaaaggaag 186 |||||||| |||||||||||||| ||||||||||||||| Sbjct: 2175 aaacttagtgaactgaaacatcttagtagctaaaggaag 2213
>gb|AE017197.1| Rickettsia typhi str. Wilmington complete genome Length = 1111496 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 256409 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 256468 Query: 214 cggcgagcga 223 | ||||||| Sbjct: 256469 tgacgagcga 256478
>gb|AE008594.1| Rickettsia conorii str. Malish 7, section 26 of 114 of the complete genome Length = 10545 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 980 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 1039 Query: 214 cggcgagcga 223 | ||||||| Sbjct: 1040 tgacgagcga 1049
>gb|AY033298.1| Uncultured alpha proteobacterium MB11B03 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3604 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 2000 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 2059 Query: 214 cggcgagcga 223 | ||||||| Sbjct: 2060 tgacgagcga 2069
>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome Length = 1485148 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 341867 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 341926 Query: 214 cggcgagcga 223 | ||||||| Sbjct: 341927 tgacgagcga 341936
>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome Length = 1522076 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 418394 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 418453 Query: 214 cggcgagcga 223 | ||||||| Sbjct: 418454 tgacgagcga 418463
>emb|Z49077.2|RPFMTGN Rickettsia prowazekii fmt gene for L-methionyl-tRNA-fMet N-formyltransferase and 23S rRNA gene Length = 4466 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 1784 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 1843 Query: 214 cggcgagcga 223 | ||||||| Sbjct: 1844 tgacgagcga 1853
>emb|Y13122.2|RCY13122 Rickettsia conorii fmt gene (partial) and 23S rRNA gene Length = 3935 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 1260 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 1319 Query: 214 cggcgagcga 223 | ||||||| Sbjct: 1320 tgacgagcga 1329
>emb|BX897699.1| Bartonella henselae strain Houston-1, complete genome Length = 1931047 Score = 60.0 bits (30), Expect = 6e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| || ||||| | | ||||| |||||| |||||||||| || Sbjct: 1581640 gaactgaaacatctaagtacctgtaggaaaggacatcaaacgagactccgttagtagtgg 1581581 Query: 217 cgagcgagagcgga 230 ||||||| |||||| Sbjct: 1581580 cgagcgaaagcgga 1581567 Score = 60.0 bits (30), Expect = 6e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| || ||||| | | ||||| |||||| |||||||||| || Sbjct: 1411631 gaactgaaacatctaagtacctgtaggaaaggacatcaaacgagactccgttagtagtgg 1411572 Query: 217 cgagcgagagcgga 230 ||||||| |||||| Sbjct: 1411571 cgagcgaaagcgga 1411558
>emb|AJ235270.1|RPXX01 Rickettsia prowazekii strain Madrid E, complete genome; segment 1/4 Length = 282610 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 258036 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 258095 Query: 214 cggcgagcga 223 | ||||||| Sbjct: 258096 tgacgagcga 258105
>gb|DQ312977.1| Uncultured bacterium clone 3N7C 23S ribosomal RNA gene, partial sequence Length = 751 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 6 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 65 Query: 214 cggcgagcga 223 | ||||||| Sbjct: 66 tgacgagcga 75
>gb|DQ312785.1| Uncultured bacterium clone 3H2F 23S ribosomal RNA gene, partial sequence Length = 788 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 6 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 65 Query: 214 cggcgagcga 223 | ||||||| Sbjct: 66 tgacgagcga 75
>gb|DQ312614.1| Uncultured bacterium clone 3C2C 23S ribosomal RNA gene, partial sequence Length = 309 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 53 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 112 Query: 214 cggcgagcga 223 | ||||||| Sbjct: 113 tgacgagcga 122
>gb|AF410943.1| Bartonella henselae 23S ribosomal RNA gene, partial sequence Length = 2448 Score = 60.0 bits (30), Expect = 6e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| || ||||| | | ||||| |||||| |||||||||| || Sbjct: 113 gaactgaaacatctaagtacctgtaggaaaggacatcaaacgagactccgttagtagtgg 172 Query: 217 cgagcgagagcgga 230 ||||||| |||||| Sbjct: 173 cgagcgaaagcgga 186
>emb|AJ133712.1|RCA133712 Rickettsia canada 23S rRNA gene, partial Length = 2719 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 141 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 200 Query: 214 cggcgagcga 223 | ||||||| Sbjct: 201 tgacgagcga 210
>emb|AJ133711.1|RAU133711 Rickettsia australis 23S rRNA gene, partial Length = 2718 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 141 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 200 Query: 214 cggcgagcga 223 | ||||||| Sbjct: 201 tgacgagcga 210
>emb|Y13133.2|RTY13133 Rickettsia typhi fmt gene (partial) and 23S rRNA gene Length = 3816 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 1138 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 1197 Query: 214 cggcgagcga 223 | ||||||| Sbjct: 1198 tgacgagcga 1207
>emb|Y13129.2|RAY13129 Rickettsia akari fmt gene (partial) and 23S rRNA gene Length = 3939 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 1263 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 1322 Query: 214 cggcgagcga 223 | ||||||| Sbjct: 1323 tgacgagcga 1332
>emb|Y13128.2|RRY13128 Rickettsia rhipicephali fmt gene (partial) and 23S rRNA gene Length = 3927 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 1252 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 1311 Query: 214 cggcgagcga 223 | ||||||| Sbjct: 1312 tgacgagcga 1321
>emb|Y13127.2|RMY13127 Rickettsia montana fmt gene (partial) and 23S rRNA gene Length = 3929 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 1252 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 1311 Query: 214 cggcgagcga 223 | ||||||| Sbjct: 1312 tgacgagcga 1321
>emb|Y13125.2|RRY13125 Rickettsia rickettsii fmt gene (partial) and 23S rRNA gene Length = 3968 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 1293 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 1352 Query: 214 cggcgagcga 223 | ||||||| Sbjct: 1353 tgacgagcga 1362
>emb|Y13124.2|RSY13124 Rickettsia sibirica fmt gene (partial) and 23S rRNA gene Length = 3938 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 1261 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 1320 Query: 214 cggcgagcga 223 | ||||||| Sbjct: 1321 tgacgagcga 1330
>emb|Y13123.2|RPY13123 Rickettsia parkeri fmt gene (partial) and 23S rRNA gene Length = 3939 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 1264 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 1323 Query: 214 cggcgagcga 223 | ||||||| Sbjct: 1324 tgacgagcga 1333
>gb|U11022.1|RRU11022 Rickettsia rickettsii 23S rRNA and 5S rRNA genes, partial sequence, and 23S-5S internal transcribed spacer Length = 3069 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 122 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 181 Query: 214 cggcgagcga 223 | ||||||| Sbjct: 182 tgacgagcga 191
>gb|U11018.1|RPU11018 Rickettsia prowazekii 23S rRNA and 5S rRNA genes, partial sequence, and 23S-5S internal transcribed spacer Length = 3056 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 122 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 181 Query: 214 cggcgagcga 223 | ||||||| Sbjct: 182 tgacgagcga 191
>gb|U11015.1|RBU11015 Rickettsia bellii 23S rRNA and 5S rRNA genes, partial sequence, and 23S-5S internal transcribed spacer Length = 3092 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 |||||||||||| |||| ||||||| ||||| | | |||||||||||| |||||||||| Sbjct: 122 agcgaactgaaatatctaagtagctggaggaaaggacatcaaccgagactccgttagtag 181 Query: 214 cggcgagcga 223 | ||||||| Sbjct: 182 tgacgagcga 191
>gb|AF279106.2| Uncultured marine gamma proteobacterium EBAC31A08 BAC sequence Length = 128758 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 147 caaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccg 206 ||||| ||| |||||||||||||| |||| ||| ||||| |||||||| |||| ||| Sbjct: 99620 caaacctagggaactgaaacatctaagtacctagaggaaaagaaatcaacagagattccg 99679 Query: 207 ttagtagcggcgagcga 223 |||||||||||||||| Sbjct: 99680 gtagtagcggcgagcga 99696
>gb|AY458644.1| Uncultured bacterium 562 clone EBAC000-45B06 genomic sequence Length = 61185 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 147 caaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccg 206 ||||| ||| |||||||||||||| |||| ||| ||||| |||||||| |||| ||| Sbjct: 81 caaacctagggaactgaaacatctaagtacctagaggaaaagaaatcaacagagattccg 140 Query: 207 ttagtagcggcgagcga 223 |||||||||||||||| Sbjct: 141 gtagtagcggcgagcga 157
>gb|AY372454.1| Uncultured marine gamma proteobacterium EB000-45B06 fosmid clone Length = 61173 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 147 caaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccg 206 ||||| ||| |||||||||||||| |||| ||| ||||| |||||||| |||| ||| Sbjct: 81 caaacctagggaactgaaacatctaagtacctagaggaaaagaaatcaacagagattccg 140 Query: 207 ttagtagcggcgagcga 223 |||||||||||||||| Sbjct: 141 gtagtagcggcgagcga 157
>gb|AY596241.1| Helicobacter aurati strain ATCC BBA-1 23S ribosomal RNA gene, partial sequence Length = 2711 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 147 caaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccg 206 ||||| ||||||| |||||||||| |||||||| ||||| ||||||| ||||| | Sbjct: 120 caaacctagcgaagtgaaacatctcagtagctagaggaaaagaaatcaaacgagattctc 179 Query: 207 ttagtagcggcgagcga 223 ||||||||||||||||| Sbjct: 180 ttagtagcggcgagcga 196
>gb|AF437291.1| Saccharomyces castellii strain NRRL Y-12630 mitochondrion, complete genome Length = 25753 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 149 aacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgaga 201 ||||||| |||||||||||||| |||| ||||||||| ||||||||||||| Sbjct: 20544 aacttagtgaactgaaacatctaagtaactaaaggaatataaatcaaccgaga 20596
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 155 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 214 |||||||||||||||| |||||| ||||| | | |||||||||||| ||| |||||| Sbjct: 1829342 gcgaactgaaacatctaagtagcccgaggaaaggacatcaaccgagactccgctagtagt 1829401 Query: 215 ggcgagcga 223 ||||||||| Sbjct: 1829402 ggcgagcga 1829410 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 155 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 214 |||||||||||||||| |||||| ||||| | | |||||||||||| ||| |||||| Sbjct: 967116 gcgaactgaaacatctaagtagcccgaggaaaggacatcaaccgagactccgctagtagt 967175 Query: 215 ggcgagcga 223 ||||||||| Sbjct: 967176 ggcgagcga 967184
>gb|L42847.1|MIQCPRGOL Micromonas pusilla large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2558 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 149 aacttagcgaactgaaacatctgagtagctaaaggaa 185 ||||||| |||||||||||||| |||||||||||||| Sbjct: 148 aacttagtgaactgaaacatcttagtagctaaaggaa 184
>gb|AF208509.1|AF208509 Bradyrhizobium japonicum strain USDA 129 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 2759 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 147 caaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccg 206 ||||| ||| |||||||||||||| |||| || ||||| | | |||||| ||||| ||| Sbjct: 2574 caaacctagggaactgaaacatctaagtacctggaggaaaggacatcaacagagactccg 2633 Query: 207 ttagtagcggcgagcga 223 ||||||| ||||||||| Sbjct: 2634 ttagtagtggcgagcga 2650
>gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster, complete genome Length = 1267782 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 147 caaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccg 206 ||||||| | ||||||||| |||| |||||| ||||||| ||||||||||||| | | Sbjct: 182596 caaacttggtgaactgaaatatctaagtagccaaaggaaaagaaatcaaccgagattctg 182655 Query: 207 ttagtagcggcgagcgagagcggaa 231 ||||||| | ||||||| ||||||| Sbjct: 182656 ttagtagtgacgagcgaaagcggaa 182680
>gb|DQ313053.1| Uncultured bacterium clone 3Q12G 23S ribosomal RNA gene, partial sequence Length = 332 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 ||||||||||||||||| ||||||| ||||| ||||||||||||| ||| ||||| Sbjct: 69 agcgaactgaaacatctaagtagctcgaggaaaagaaatcaaccgagattccggaagtag 128 Query: 214 cggcgagcgagagcggaaca 233 ||||||||| | ||||||| Sbjct: 129 tggcgagcgaaaccggaaca 148
>gb|DQ312872.1| Uncultured bacterium clone 3K12G 23S ribosomal RNA gene, partial sequence Length = 722 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 ||||||||||||||||| ||||||| ||||| ||||||||||||| ||| ||||| Sbjct: 22 agcgaactgaaacatctaagtagctcgaggaaaagaaatcaaccgagattccggaagtag 81 Query: 214 cggcgagcgagagcggaaca 233 ||||||||| | ||||||| Sbjct: 82 tggcgagcgaaaccggaaca 101
>gb|DQ312842.1| Uncultured bacterium clone 3J12G 23S ribosomal RNA gene, partial sequence Length = 332 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 ||||||||||||||||| ||||||| ||||| ||||||||||||| ||| ||||| Sbjct: 69 agcgaactgaaacatctaagtagctcgaggaaaagaaatcaaccgagattccggaagtag 128 Query: 214 cggcgagcgagagcggaaca 233 ||||||||| | ||||||| Sbjct: 129 tggcgagcgaaaccggaaca 148
>gb|DQ312687.1| Uncultured bacterium clone 3E11G 23S ribosomal RNA gene, partial sequence Length = 307 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 155 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagc 214 |||||||||||||||| |||||| ||||| | | ||||||||| || |||| ||||| Sbjct: 68 gcgaactgaaacatctaagtagccggaggaaaggatatcaaccgatactccgtaagtagt 127 Query: 215 ggcgagcgagagcgga 230 ||||||||| |||||| Sbjct: 128 ggcgagcgaaagcgga 143
>gb|DQ312635.1| Uncultured bacterium clone 3C7A 23S ribosomal RNA gene, partial sequence Length = 331 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 154 agcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtag 213 ||||||||||||||||| ||||||| ||||| ||||||||||||| ||| ||||| Sbjct: 67 agcgaactgaaacatctaagtagctcgaggaaaagaaatcaaccgagattccggaagtag 126 Query: 214 cggcgagcgagagcggaaca 233 ||||||||| | ||||||| Sbjct: 127 tggcgagcgaaaccggaaca 146
>gb|AY826693.1| Bradyrhizobium sp. EAA4.8 23S ribosomal RNA gene, partial sequence Length = 468 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| || ||||| | | ||||| |||||| |||||||||| || Sbjct: 216 gaactgaaacatctaagtacctggaggaaaggacatcaatcgagactccgttagtagtgg 275 Query: 217 cgagcga 223 ||||||| Sbjct: 276 cgagcga 282
>gb|AY826692.1| Bradyrhizobium sp. EDC3.5 23S ribosomal RNA gene, partial sequence Length = 468 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| || ||||| | | ||||| |||||| |||||||||| || Sbjct: 216 gaactgaaacatctaagtacctggaggaaaggacatcaatcgagactccgttagtagtgg 275 Query: 217 cgagcga 223 ||||||| Sbjct: 276 cgagcga 282
>gb|AY826691.1| Bradyrhizobium sp. ERFr4.13TC1 23S ribosomal RNA gene, partial sequence Length = 495 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| || ||||| | | |||||| ||||| |||||||||| || Sbjct: 243 gaactgaaacatctaagtacctggaggaaaggacatcaacagagactccgttagtagtgg 302 Query: 217 cgagcga 223 ||||||| Sbjct: 303 cgagcga 309
>gb|AY826690.1| Bradyrhizobium sp. EDC3.6 23S ribosomal RNA gene, partial sequence Length = 495 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| || ||||| | | |||||| ||||| |||||||||| || Sbjct: 243 gaactgaaacatctaagtacctggaggaaaggacatcaacagagactccgttagtagtgg 302 Query: 217 cgagcga 223 ||||||| Sbjct: 303 cgagcga 309
>gb|AY826689.1| Bradyrhizobium sp. ERFr1.7CK2 23S ribosomal RNA gene, partial sequence Length = 495 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| || ||||| | | |||||| ||||| |||||||||| || Sbjct: 243 gaactgaaacatctaagtacctggaggaaaggacatcaacagagactccgttagtagtgg 302 Query: 217 cgagcga 223 ||||||| Sbjct: 303 cgagcga 309
>gb|AY826688.1| Bradyrhizobium sp. EDC2.8 23S ribosomal RNA gene, partial sequence Length = 495 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| || ||||| | | |||||| ||||| |||||||||| || Sbjct: 243 gaactgaaacatctaagtacctggaggaaaggacatcaacagagactccgttagtagtgg 302 Query: 217 cgagcga 223 ||||||| Sbjct: 303 cgagcga 309
>gb|AE009348.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 118 of 187 of the complete sequence Length = 10029 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| || ||||| | | |||||||||||| |||| ||||| || Sbjct: 3610 gaactgaaacatctaagtacctgcaggaaaggacatcaaccgagactccgtaagtagtgg 3669 Query: 217 cgagcga 223 ||||||| Sbjct: 3670 cgagcga 3676
>gb|AE009325.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 95 of 187 of the complete sequence Length = 11704 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| || ||||| | | |||||||||||| |||| ||||| || Sbjct: 1324 gaactgaaacatctaagtacctgcaggaaaggacatcaaccgagactccgtaagtagtgg 1383 Query: 217 cgagcga 223 ||||||| Sbjct: 1384 cgagcga 1390
>gb|AE009200.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 226 of 256 of the complete sequence Length = 10654 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| || ||||| | | |||||||||||| |||| ||||| || Sbjct: 10540 gaactgaaacatctaagtacctgcaggaaaggacatcaaccgagactccgtaagtagtgg 10481 Query: 217 cgagcga 223 ||||||| Sbjct: 10480 cgagcga 10474
>gb|AE008980.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 6 of 256 of the complete sequence Length = 10029 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| || ||||| | | |||||||||||| |||| ||||| || Sbjct: 3382 gaactgaaacatctaagtacctgcaggaaaggacatcaaccgagactccgtaagtagtgg 3441 Query: 217 cgagcga 223 ||||||| Sbjct: 3442 cgagcga 3448
>gb|AE008290.2| Agrobacterium tumefaciens str. C58 linear chromosome, section 94 of 187 of the complete sequence Length = 13627 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| || ||||| | | |||||||||||| |||| ||||| || Sbjct: 2336 gaactgaaacatctaagtacctgcaggaaaggacatcaaccgagactccgtaagtagtgg 2277 Query: 217 cgagcga 223 ||||||| Sbjct: 2276 cgagcga 2270
>gb|AE008265.2| Agrobacterium tumefaciens str. C58 linear chromosome, section 69 of 187 of the complete sequence Length = 11527 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| || ||||| | | |||||||||||| |||| ||||| || Sbjct: 8507 gaactgaaacatctaagtacctgcaggaaaggacatcaaccgagactccgtaagtagtgg 8448 Query: 217 cgagcga 223 ||||||| Sbjct: 8447 cgagcga 8441
>gb|AY033311.1| Uncultured gamma proteobacterium MB11G09 16S ribosomal RNA and 23S ribosomal RNA genes, partial sequence Length = 3597 Score = 54.0 bits (27), Expect = 4e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 147 caaacttagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccg 206 ||||| ||| |||||||||||||| |||| ||| ||||| ||||||| |||| ||| Sbjct: 1874 caaacctagggaactgaaacatctaagtacctagaggaaaagaaatcaattgagattccg 1933 Query: 207 ttagtagcggcgagcgagagcggaaca 233 |||||||||||||||| | ||||||| Sbjct: 1934 gtagtagcggcgagcgaaaccggaaca 1960
>gb|AY286123.1| Cyanidioschyzon merolae DBV201 chloroplast, complete genome Length = 149705 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 147 caaacttagcgaactgaaacatctgagtagctaaaggaa 185 ||||| |||||||||||||||||| |||||||| ||||| Sbjct: 45901 caaacctagcgaactgaaacatcttagtagctagaggaa 45863
>gb|AY458630.1| Uncultured bacterium 106 clone EBAC750-01B07 genomic sequence Length = 43887 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 157 gaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagtagcgg 216 |||||||||||||| |||| | ||||||| ||||||||||||| | | ||||||||| Sbjct: 24311 gaactgaaacatctcagtacccaaaggaatagaaatcaaccgagattctgctagtagcgg 24252 Query: 217 cgagcga 223 ||||||| Sbjct: 24251 cgagcga 24245
>emb|X65487.1|PS23SRRN P.shigelloides gene for 23S rRNA Length = 2761 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 189 aaatcaaccgagaccccgttagtagcggcgagcga 223 ||||||||||||| |||||||||||||||||||| Sbjct: 220 aaatcaaccgagattccgttagtagcggcgagcga 254
>gb|DQ150561.1| Herbaspirillum huttiense strain 266 23S ribosomal RNA gene, partial sequence Length = 2426 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 155 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgaga 201 |||||||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 11 gcgaactgaaacatctaagtagctacaggaaaagaaatcaaccgaga 57
>gb|DQ150560.1| Herbaspirillum putei strain 7-2 23S ribosomal RNA gene, partial sequence Length = 2398 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 155 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgaga 201 |||||||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 20 gcgaactgaaacatctaagtagctacaggaaaagaaatcaaccgaga 66
>gb|DQ150559.1| Herbaspirillum rubrisubalbicans strain LMG2286 23S ribosomal RNA gene, partial sequence Length = 2436 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 155 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgaga 201 |||||||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 21 gcgaactgaaacatctaagtagctacaggaaaagaaatcaaccgaga 67
>gb|DQ150558.1| Herbaspirillum frisingense strain GSF30 23S ribosomal RNA gene, partial sequence Length = 2436 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 155 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgaga 201 |||||||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 21 gcgaactgaaacatctaagtagctacaggaaaagaaatcaaccgaga 67
>gb|DQ150556.1| Herbaspirillum seropedicae strain Z67 23S ribosomal RNA gene, partial sequence Length = 2480 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 155 gcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgaga 201 |||||||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 44 gcgaactgaaacatctaagtagctacaggaaaagaaatcaaccgaga 90
>gb|AY596265.1| Helicobacter mastomyrinus strain MIT 97-5577 23S ribosomal RNA gene, partial sequence Length = 2713 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 153 tagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagta 212 ||||||| |||||||||| |||||||| ||||| |||||||| |||| | |||||| Sbjct: 127 tagcgaagtgaaacatctcagtagctagaggaaaagaaatcaacagagattctcttagta 186 Query: 213 gcggcgagcga 223 ||||||||||| Sbjct: 187 gcggcgagcga 197
>gb|AY596263.1| Helicobacter sp. MIT 99-5504 23S ribosomal RNA gene, partial sequence Length = 2714 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 153 tagcgaactgaaacatctgagtagctaaaggaaggaaaatcaaccgagaccccgttagta 212 ||||||| |||||||||| |||||||| ||||| ||||||| ||||| || ||||| Sbjct: 126 tagcgaagtgaaacatctcagtagctagaggaaaagaaatcaaacgagattcccctagta 185 Query: 213 gcggcgagcga 223 ||||||||||| Sbjct: 186 gcggcgagcga 196 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,418,827 Number of Sequences: 3902068 Number of extensions: 3418827 Number of successful extensions: 65576 Number of sequences better than 10.0: 937 Number of HSP's better than 10.0 without gapping: 905 Number of HSP's successfully gapped in prelim test: 38 Number of HSP's that attempted gapping in prelim test: 62845 Number of HSP's gapped (non-prelim): 2692 length of query: 438 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 416 effective length of database: 17,147,199,772 effective search space: 7133235105152 effective search space used: 7133235105152 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
