>MK08_RAT (P49185) Mitogen-activated protein kinase 8 (EC 2.7.11.24)|
           (Stress-activated protein kinase JNK1) (c-Jun N-terminal
           kinase 1) (SAPK gamma) (p54 gamma)
          Length = 411

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +3

Query: 276 YLDGFNLMAHNLSSGAENLYKKLYSTIPSNMECHPKYISYS 398
           Y+D +N +   L +      KKL  T+ + +E  PKY  YS
Sbjct: 230 YIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYS 270

>MK08_HUMAN (P45983) Mitogen-activated protein kinase 8 (EC 2.7.11.24)|
           (Stress-activated protein kinase JNK1) (c-Jun N-terminal
           kinase 1) (JNK-46)
          Length = 427

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +3

Query: 276 YLDGFNLMAHNLSSGAENLYKKLYSTIPSNMECHPKYISYS 398
           Y+D +N +   L +      KKL  T+ + +E  PKY  YS
Sbjct: 230 YIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYS 270

>MK08_MOUSE (Q91Y86) Mitogen-activated protein kinase 8 (EC 2.7.11.24)|
           (Stress-activated protein kinase JNK1) (c-Jun N-terminal
           kinase 1)
          Length = 384

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +3

Query: 276 YLDGFNLMAHNLSSGAENLYKKLYSTIPSNMECHPKYISYS 398
           Y+D +N +   L +      KKL  T+ + +E  PKY  YS
Sbjct: 230 YIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYS 270

>YH10_YEAST (P38893) Hypothetical 37.9 kDa protein in TWT1-FLO5 intergenic|
           region
          Length = 341

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = +3

Query: 153 LVTISDPSNLLRDIPVCQPFHLELNFFNQENRVVQYP-VRAFYLDGFNLMAHNLSSGAEN 329
           ++TI D   L   I       L+L   N E+ V+ YP +  +  DG+N +   +   A  
Sbjct: 12  VITIGDAKKLQATISELGATLLDLKV-NNESIVLGYPDIHGYISDGYNYIGATVGRYANR 70

Query: 330 LYKKLYS 350
           +YK ++S
Sbjct: 71  IYKGMFS 77

>IVD_CAEEL (P34275) Probable isovaleryl-CoA dehydrogenase (EC 1.3.99.10) (IVD)|
          Length = 408

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 381 WGGIPYLRES*SKASYRDFRLQMIGYG 301
           WGG  YL ++    ++RDFR+  IG G
Sbjct: 361 WGGAGYLNDNGISRAFRDFRIFSIGAG 387

>EX5C_BUCAI (P57528) Exodeoxyribonuclease V gamma chain (EC 3.1.11.5)|
          Length = 1070

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = +3

Query: 276 YLDGFNLMAHNLSSGAENLYKKLYSTIPSNMECHPK--YISY 395
           YLD FNL+      G  NLY+K       ++ C  K  YISY
Sbjct: 644 YLDNFNLLKKYPLIGDINLYQKYSYLFVQSLSCAEKYFYISY 685

>AKH_HAEIN (P44505) Bifunctional aspartokinase/homoserine dehydrogenase|
           (AK-HD) [Includes: Aspartokinase (EC 2.7.2.4);
           Homoserine dehydrogenase (EC 1.1.1.3)]
          Length = 815

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = -2

Query: 239 LVEEVQLQMEWLTNRNISQKVARI*NSNK 153
           L+E+V+ Q E+L  +N+  +V  I NSN+
Sbjct: 480 LIEQVKRQKEYLAKKNVEIRVCAIANSNR 508

>CRIM1_MOUSE (Q9JLL0) Cysteine-rich motor neuron 1 protein precursor (CRIM-1)|
           (Fragment)
          Length = 1028

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +3

Query: 102 SHFMEGHAKSGPISRLPLVTISDPSNLLRDIPVCQPFHLEL 224
           S  +EG+A  G    LP   + DP+  LR   VCQP +L +
Sbjct: 182 SILIEGYAPPGECCPLPSRCVCDPAGCLR--KVCQPGYLNI 220

>MK08_XENLA (Q8QHK8) Mitogen-activated protein kinase 8 (EC 2.7.11.24)|
           (Stress-activated protein kinase JNK1)
          Length = 426

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +3

Query: 276 YLDGFNLMAHNLSSGAENLYKKLYSTIPSNMECHPKYISYS 398
           ++D +N +   L +      KKL  T+ + +E  PKY  YS
Sbjct: 230 HIDQWNKVIEQLGTPCTEFMKKLQPTVRTYVENRPKYAGYS 270


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,381,174
Number of Sequences: 219361
Number of extensions: 1226822
Number of successful extensions: 2976
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2975
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)