>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  297 bits (150), Expect = 2e-77
 Identities = 239/269 (88%)
 Strand = Plus / Plus

                                                                            
Query: 224      tggatgttactcaaatactcttgagtgcgcaatctgctgatggctcgattagaaagcatg 283
                ||||| |||||||| | ||||||||||| |||||| |||||||| ||| ||| |||| ||
Sbjct: 23437818 tggatattactcaagttctcttgagtgcacaatctcctgatggcgcgactaggaagcttg 23437877

                                                                            
Query: 284      ctgaagaaagcctcaagcagtttcaggagcaaaacctcccaggttttttgctctccctct 343
                ||||||||||||| |||||||| ||||||||||||||||||||||| ||| |||||||||
Sbjct: 23437878 ctgaagaaagccttaagcagttccaggagcaaaacctcccaggtttcttgttctccctct 23437937

                                                                            
Query: 344      caagtgagttggccaacaacgagaaacctgaggagagccgcaggttggctggtttgatcc 403
                ||| ||||||||||||  | |||||||||||||| ||||| ||||||||||| ||||| |
Sbjct: 23437938 caaatgagttggccaatgaggagaaacctgaggaaagccggaggttggctggcttgattc 23437997

                                                                            
Query: 404      tcaagaatgcgctggacgcanaggagcagcacaggaagaatgaacttttccagagatggc 463
                |||||||||| ||||| ||  |||||||||||||||||||||| ||||||||||||||||
Sbjct: 23437998 tcaagaatgcactggatgccaaggagcagcacaggaagaatgagcttttccagagatggc 23438057

                                             
Query: 464      tggcactggatgctggtgtcaaggcacag 492
                ||||||| |||| ||| || |||||||||
Sbjct: 23438058 tggcactagatgttggcgttaaggcacag 23438086

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  297 bits (150), Expect = 2e-77
 Identities = 239/269 (88%)
 Strand = Plus / Plus

                                                                            
Query: 224      tggatgttactcaaatactcttgagtgcgcaatctgctgatggctcgattagaaagcatg 283
                ||||| |||||||| | ||||||||||| |||||| |||||||| ||| ||| |||| ||
Sbjct: 23366009 tggatattactcaagttctcttgagtgcacaatctcctgatggcgcgactaggaagcttg 23366068

                                                                            
Query: 284      ctgaagaaagcctcaagcagtttcaggagcaaaacctcccaggttttttgctctccctct 343
                ||||||||||||| |||||||| ||||||||||||||||||||||| ||| |||||||||
Sbjct: 23366069 ctgaagaaagccttaagcagttccaggagcaaaacctcccaggtttcttgttctccctct 23366128

                                                                            
Query: 344      caagtgagttggccaacaacgagaaacctgaggagagccgcaggttggctggtttgatcc 403
                ||| ||||||||||||  | |||||||||||||| ||||| ||||||||||| ||||| |
Sbjct: 23366129 caaatgagttggccaatgaggagaaacctgaggaaagccggaggttggctggcttgattc 23366188

                                                                            
Query: 404      tcaagaatgcgctggacgcanaggagcagcacaggaagaatgaacttttccagagatggc 463
                |||||||||| ||||| ||  |||||||||||||||||||||| ||||||||||||||||
Sbjct: 23366189 tcaagaatgcactggatgccaaggagcagcacaggaagaatgagcttttccagagatggc 23366248

                                             
Query: 464      tggcactggatgctggtgtcaaggcacag 492
                ||||||| |||| ||| || |||||||||
Sbjct: 23366249 tggcactagatgttggcgttaaggcacag 23366277

>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 162261

 Score =  297 bits (150), Expect = 2e-77
 Identities = 239/269 (88%)
 Strand = Plus / Minus

                                                                         
Query: 224   tggatgttactcaaatactcttgagtgcgcaatctgctgatggctcgattagaaagcatg 283
             ||||| |||||||| | ||||||||||| |||||| |||||||| ||| ||| |||| ||
Sbjct: 64341 tggatattactcaagttctcttgagtgcacaatctcctgatggcgcgactaggaagcttg 64282

                                                                         
Query: 284   ctgaagaaagcctcaagcagtttcaggagcaaaacctcccaggttttttgctctccctct 343
             ||||||||||||| |||||||| ||||||||||||||||||||||| ||| |||||||||
Sbjct: 64281 ctgaagaaagccttaagcagttccaggagcaaaacctcccaggtttcttgttctccctct 64222

                                                                         
Query: 344   caagtgagttggccaacaacgagaaacctgaggagagccgcaggttggctggtttgatcc 403
             ||| ||||||||||||  | |||||||||||||| ||||| ||||||||||| ||||| |
Sbjct: 64221 caaatgagttggccaatgaggagaaacctgaggaaagccggaggttggctggcttgattc 64162

                                                                         
Query: 404   tcaagaatgcgctggacgcanaggagcagcacaggaagaatgaacttttccagagatggc 463
             |||||||||| ||||| ||  |||||||||||||||||||||| ||||||||||||||||
Sbjct: 64161 tcaagaatgcactggatgccaaggagcagcacaggaagaatgagcttttccagagatggc 64102

                                          
Query: 464   tggcactggatgctggtgtcaaggcacag 492
             ||||||| |||| ||| || |||||||||
Sbjct: 64101 tggcactagatgttggcgttaaggcacag 64073

>dbj|AB011271.1| Oryza sativa (japonica cultivar-group) mRNA for importin-beta2,
           partial cds
          Length = 3676

 Score =  297 bits (150), Expect = 2e-77
 Identities = 239/269 (88%)
 Strand = Plus / Plus

                                                                       
Query: 224 tggatgttactcaaatactcttgagtgcgcaatctgctgatggctcgattagaaagcatg 283
           ||||| |||||||| | ||||||||||| |||||| |||||||| ||| ||| |||| ||
Sbjct: 103 tggatattactcaagttctcttgagtgcacaatctcctgatggcgcgactaggaagcttg 162

                                                                       
Query: 284 ctgaagaaagcctcaagcagtttcaggagcaaaacctcccaggttttttgctctccctct 343
           ||||||||||||| |||||||| ||||||||||||||||||||||| ||| |||||||||
Sbjct: 163 ctgaagaaagccttaagcagttccaggagcaaaacctcccaggtttcttgttctccctct 222

                                                                       
Query: 344 caagtgagttggccaacaacgagaaacctgaggagagccgcaggttggctggtttgatcc 403
           ||| ||||||||||||  | |||||||||||||| ||||| ||||||||||| ||||| |
Sbjct: 223 caaatgagttggccaatgaggagaaacctgaggaaagccggaggttggctggcttgattc 282

                                                                       
Query: 404 tcaagaatgcgctggacgcanaggagcagcacaggaagaatgaacttttccagagatggc 463
           |||||||||| ||||| ||  |||||||||||||||||||||| ||||||||||||||||
Sbjct: 283 tcaagaatgcactggatgccaaggagcagcacaggaagaatgagcttttccagagatggc 342

                                        
Query: 464 tggcactggatgctggtgtcaaggcacag 492
           ||||||| |||| ||| || |||||||||
Sbjct: 343 tggcactagatgttggcgttaaggcacag 371

>ref|NM_124727.2| Arabidopsis thaliana protein transporter AT5G53480 mRNA, complete
           cds
          Length = 3811

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 277 aagcatgctgaagaaagcctcaagcagtttcaggagcaaaacct 320
           ||||| || |||||||| || |||||||||||||||||||||||
Sbjct: 186 aagcacgcggaagaaagtcttaagcagtttcaggagcaaaacct 229

>dbj|AK117217.1| Arabidopsis thaliana At5g53480 mRNA for putative importin beta,
           complete cds, clone: RAFL16-76-N11
          Length = 3810

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 277 aagcatgctgaagaaagcctcaagcagtttcaggagcaaaacct 320
           ||||| || |||||||| || |||||||||||||||||||||||
Sbjct: 186 aagcacgcggaagaaagtcttaagcagtttcaggagcaaaacct 229

>dbj|AB015476.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNC6
          Length = 82952

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 277 aagcatgctgaagaaagcctcaagcagtttcaggagcaaaacct 320
           ||||| || |||||||| || |||||||||||||||||||||||
Sbjct: 309 aagcacgcggaagaaagtcttaagcagtttcaggagcaaaacct 352

>gb|AC138737.10| Mus musculus chromosome 5, clone RP23-307F20, complete sequence
          Length = 216064

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 257   ctgctgatggctcgattagaaagcatgctg 286
             |||||| ||||||| |||||||||||||||
Sbjct: 59807 ctgctgttggctcgtttagaaagcatgctg 59836

>gb|AY789925.1| Pseudomonas sp. MG87 16S ribosomal RNA gene, partial sequence
          Length = 1289

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 442 aatgaacttttccagagatgg 462
           |||||||||||||||||||||
Sbjct: 909 aatgaacttttccagagatgg 929

>emb|AL669817.7| Mouse DNA sequence from clone RP23-295J8 on chromosome 11, complete
             sequence
          Length = 120663

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 427   gagcagcacaggaagaatgaa 447
             |||||||||||||||||||||
Sbjct: 62756 gagcagcacaggaagaatgaa 62776

>gb|AC129777.4| Mus musculus BAC clone RP23-281H23 from 8, complete sequence
          Length = 228174

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 318    cctcccaggttttttgctctc 338
              |||||||||||||||||||||
Sbjct: 134292 cctcccaggttttttgctctc 134312

>ref|XM_514934.1| PREDICTED: Pan troglodytes similar to Periodic tryptophan protein 2
            homolog (LOC458597), mRNA
          Length = 4521

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 469  ctggatgctggtgtcaaggcacag 492
            |||||||| |||||||||||||||
Sbjct: 2190 ctggatgccggtgtcaaggcacag 2167

>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 25     ccgccgtcgccgaatcgcgg 44
              ||||||||||||||||||||
Sbjct: 909969 ccgccgtcgccgaatcgcgg 909950

>gb|U80840.1| Caenorhabditis elegans cosmid F08D12, complete sequence
          Length = 33268

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 326  gttttttgctctccctctca 345
            ||||||||||||||||||||
Sbjct: 4591 gttttttgctctccctctca 4572

>gb|AY523976.1|AY523972S5 Azospirillum brasilense plasmid 90 MDa, partial sequence
          Length = 32896

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 46    gctcccgcgccgcccaatcg 65
             ||||||||||||||||||||
Sbjct: 10651 gctcccgcgccgcccaatcg 10670

>gb|AC126265.3| Mus musculus BAC clone RP23-383O12 from chromosome 16, complete
             sequence
          Length = 186172

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 194   agcagccagcaagaagagtc 213
             ||||||||||||||||||||
Sbjct: 56970 agcagccagcaagaagagtc 56989

>gb|AC102429.11| Mus musculus chromosome 18, clone RP24-93K11, complete sequence
          Length = 216331

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 186   cccatctcagcagccagcaagaag 209
             ||||||||| ||||||||||||||
Sbjct: 30675 cccatctcatcagccagcaagaag 30652

>gb|CP000322.1| Nitrobacter hamburgensis X14 plasmid 3, complete sequence
          Length = 121408

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 291   aagcctcaagcagtttcaggagca 314
             ||||||||||||| ||||||||||
Sbjct: 99548 aagcctcaagcagcttcaggagca 99571



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 291   aagcctcaagcagtttcaggagca 314
             ||||||||||||| ||||||||||
Sbjct: 90152 aagcctcaagcagcttcaggagca 90175



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 291   aagcctcaagcagtttcaggagca 314
             ||||||||||||| ||||||||||
Sbjct: 52885 aagcctcaagcagcttcaggagca 52908

>gb|CP000320.1| Nitrobacter hamburgensis X14 plasmid 1, complete sequence
          Length = 294829

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 291    aagcctcaagcagtttcaggagca 314
              ||||||||||||| ||||||||||
Sbjct: 192812 aagcctcaagcagcttcaggagca 192835



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 291    aagcctcaagcagtttcaggagca 314
              ||||||||||||| ||||||||||
Sbjct: 181239 aagcctcaagcagcttcaggagca 181262

>ref|XM_505000.1| Yarrowia lipolytica CLIB122, YALI0F04642g predicted mRNA
          Length = 1014

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 44  gagctcccgcgccgcccaat 63
           ||||||||||||||||||||
Sbjct: 639 gagctcccgcgccgcccaat 620

>emb|AL357503.12| Human DNA sequence from clone RP5-899C14 on chromosome 20 Contains the 3'
              end of the C20orf101 gene, complete sequence
          Length = 133288

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 185    ccccatctcagcagccagca 204
              ||||||||||||||||||||
Sbjct: 103183 ccccatctcagcagccagca 103164

>emb|AL031229.2|HS15D7 Human DNA sequence from clone RP1-15D7 on chromosome 6p22.1-22.3
             Contains a 60S ribosomal protein L8 (RPL8) pseudogene,
             ESTs, STSs, GSS and two CpG islands, complete sequence
          Length = 61450

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 288   agaaagcctcaagcagtttc 307
             ||||||||||||||||||||
Sbjct: 48756 agaaagcctcaagcagtttc 48737

>gb|BC065682.1| Danio rerio transducin (beta)-like 2, mRNA (cDNA clone MGC:77216
            IMAGE:6962668), complete cds
          Length = 1739

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 280  catgctgaagaaagcctcaa 299
            ||||||||||||||||||||
Sbjct: 1530 catgctgaagaaagcctcaa 1549

>emb|BX324181.26| Zebrafish DNA sequence from clone CH211-203O8 in linkage group 4,
            complete sequence
          Length = 141840

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 449  ttttccagagatggctggca 468
            ||||||||||||||||||||
Sbjct: 2367 ttttccagagatggctggca 2386

>gb|AE006029.1| Caulobacter crescentus CB15 section 355 of 359 of the complete genome
          Length = 10213

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 51   cgcgccgcccaatcgcagggctcg 74
            |||||||||||||||| |||||||
Sbjct: 2845 cgcgccgcccaatcgctgggctcg 2868

>gb|AY050698.1| Homo sapiens clone WR16 immunoglobulin heavy chain variable region
           mRNA, partial cds
          Length = 354

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 305 ttcaggagcaaaacctccca 324
           ||||||||||||||||||||
Sbjct: 162 ttcaggagcaaaacctccca 143

>ref|XM_679073.1| PREDICTED: Danio rerio similar to Transducin (beta)-like 2
            (LOC556305), mRNA
          Length = 1475

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 280  catgctgaagaaagcctcaa 299
            ||||||||||||||||||||
Sbjct: 1299 catgctgaagaaagcctcaa 1318

>ref|NM_212767.1| Danio rerio transducin (beta)-like 2 (tbl2), mRNA
          Length = 1739

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 280  catgctgaagaaagcctcaa 299
            ||||||||||||||||||||
Sbjct: 1530 catgctgaagaaagcctcaa 1549

>emb|BX088525.4| Zebrafish DNA sequence from clone DKEYP-51F8 in linkage group 10,
              complete sequence
          Length = 212133

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 280    catgctgaagaaagcctcaa 299
              ||||||||||||||||||||
Sbjct: 206142 catgctgaagaaagcctcaa 206161

>emb|BX004868.9| Zebrafish DNA sequence from clone DKEY-209F8, complete sequence
          Length = 153986

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 449    ttttccagagatggctggca 468
              ||||||||||||||||||||
Sbjct: 123696 ttttccagagatggctggca 123715

>emb|CR385053.17| Zebrafish DNA sequence from clone DKEY-273G18 in linkage group 20,
             complete sequence
          Length = 163087

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 449   ttttccagagatggctggca 468
             ||||||||||||||||||||
Sbjct: 96863 ttttccagagatggctggca 96882

>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 44     gagctcccgcgccgcccaat 63
              ||||||||||||||||||||
Sbjct: 714124 gagctcccgcgccgcccaat 714105


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,186,484
Number of Sequences: 3902068
Number of extensions: 4186484
Number of successful extensions: 74843
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74707
Number of HSP's gapped (non-prelim): 136
length of query: 493
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 471
effective length of database: 17,147,199,772
effective search space: 8076331092612
effective search space used: 8076331092612
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)