>PEXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precursor (PELP)|
          Length = 426

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
 Frame = +1

Query: 79  TPSPSLRCSAAFFPTFASPPTVLRFAVPPLLPRRLA---VSP-PRIRIPAVASAL 231
           TPSPS          F SPP     A PPL+PRR A   V P P +  P + S L
Sbjct: 245 TPSPSPAAEPPIIAPFPSPP-----ANPPLIPRRPAPPVVKPLPPLGKPPIVSGL 294

>VNUA_PRVKA (P33485) Probable nuclear antigen|
          Length = 1733

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 20/49 (40%), Positives = 22/49 (44%)
 Frame = -3

Query: 227 AEATAGIRILGGDTASRRGRSGGTAKRRTVGGEAKVGKKAAEHRSDGDG 81
           A  +A  R  GG    R GR  G  +RR  G EA      AE   DGDG
Sbjct: 299 AGGSARRRRRGGGPPGRGGRRRGGKRRRAEGTEAAAAD--AEEEEDGDG 345

>CSPG2_MOUSE (Q62059) Versican core protein precursor (Large fibroblast|
            proteoglycan) (Chondroitin sulfate proteoglycan core
            protein 2) (PG-M)
          Length = 3358

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +1

Query: 76   ATPSPSLRCSAAFFPTFASPPTVL 147
            +TPSPS+  S++F PT  +P TVL
Sbjct: 1841 STPSPSVEISSSFEPTGLTPSTVL 1864

>CCPA_ACEXY (P37697) Cellulose-complementing protein|
          Length = 353

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 10/89 (11%)
 Frame = +1

Query: 10  DRSSTATG-----PRHRDSLMASTSY--CATPSPSLRCSAAFFPTFASPPTVLRFAVPP- 165
           DRS   TG      RH D     T+     TP+P +  +    P    PP ++    PP 
Sbjct: 42  DRSFDVTGVPEAVERHFDQAEHDTAVEEQVTPAPQIAVAPPPPPVVPDPPAIVTETAPPP 101

Query: 166 --LLPRRLAVSPPRIRIPAVASALESLVQ 246
             ++   +   PP   +PA     E+ VQ
Sbjct: 102 PVVVSAPVTYEPPAAAVPAEPPVQEAPVQ 130

>RCOR2_BRARE (Q6P116) REST corepressor 2|
          Length = 536

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 20/55 (36%), Positives = 25/55 (45%)
 Frame = +1

Query: 34  PRHRDSLMASTSYCATPSPSLRCSAAFFPTFASPPTVLRFAVPPLLPRRLAVSPP 198
           P H DS + S+   A+ + S   SA   P    PP +LR A P   P  L   PP
Sbjct: 423 PPHSDSPLPSSEGSASGNHS---SAQSSPPLTQPPPLLRPAPPSAPPSLLRQPPP 474

>HXA4_HUMAN (Q00056) Homeobox protein Hox-A4 (Hox-1D) (Hox-1.4)|
          Length = 320

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 18/49 (36%), Positives = 22/49 (44%)
 Frame = +1

Query: 82  PSPSLRCSAAFFPTFASPPTVLRFAVPPLLPRRLAVSPPRIRIPAVASA 228
           P+  L  S    P    PP +   AVPP  PRR   +P    +PA  SA
Sbjct: 126 PAHGLHASHVLQPQ--PPPPLQPRAVPPAAPRRCEAAPATPGVPAGGSA 172


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,480,326
Number of Sequences: 219361
Number of extensions: 545990
Number of successful extensions: 2238
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2235
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)