ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl25b08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NCL1_YEAST (P38205) Putative methyltransferase NCL1 (EC 2.1.1.-) 46 6e-05
2YLH4_SCHPO (Q9HGQ2) Hypothetical protein C17D4.04 in chromosome I 33 0.33
3PABS_STRGR (P32483) Para-aminobenzoate synthase (EC 6.3.5.8) (P-... 32 1.3
4ICP34_HHV1N (P37319) Infected cell protein ICP34.5 (Neurovirulen... 31 1.7
5ICP34_HHV1D (P37318) Infected cell protein ICP34.5 (Neurovirulen... 31 1.7
6ICP34_HHV1F (P08353) Infected cell protein ICP34.5 (Neurovirulen... 31 1.7
7RL1_HHV11 (O12396) Neurovirulence factor RL1 (Neurovirulence fac... 31 2.2
8BARH1_DROAN (P22544) Homeobox protein B-H1 (Homeobox BarH1 protein) 31 2.2
9CLC14_HUMAN (Q86T13) C-type lectin domain family 14 member A pre... 30 3.7
10EDS5_ARATH (Q945F0) Enhanced disease susceptibility 5 (Eds5) (Sa... 30 4.8
11NIFJ_ANASP (Q06879) Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) 29 6.3
12DYR1B_MOUSE (Q9Z188) Dual specificity tyrosine-phosphorylation-r... 29 6.3
13GCYA2_HUMAN (P33402) Guanylate cyclase soluble subunit alpha-2 (... 29 6.3
14CHEB3_PSEU2 (Q4ZQV7) Chemotaxis response regulator protein-gluta... 29 8.2

>NCL1_YEAST (P38205) Putative methyltransferase NCL1 (EC 2.1.1.-)|
          Length = 684

 Score = 45.8 bits (107), Expect = 6e-05
 Identities = 24/70 (34%), Positives = 33/70 (47%)
 Frame = +3

Query: 171 RENVWKDNPRRPPASAGEGGEGNGWQPFATENLAFEAYYKGQQIVPEEEWDAFMSMLRKP 350
           R+N  K N +   A      + N W     EN  +E YYK   + PE++W+ F    + P
Sbjct: 4   RKNFKKGNKKTFGARDDSRAQKN-WSELVKENEKWEKYYKTLALFPEDQWEEFKKTCQAP 62

Query: 351 LPAAFRINAS 380
           LP  FRI  S
Sbjct: 63  LPLTFRITGS 72



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>YLH4_SCHPO (Q9HGQ2) Hypothetical protein C17D4.04 in chromosome I|
          Length = 654

 Score = 33.5 bits (75), Expect = 0.33
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +3

Query: 264 NLAFEAYYKGQQIVPEEEWDAFMSMLRKPLPAAFRINAS 380
           N  FE YY+ Q++V E+++      L + LP  FRI AS
Sbjct: 12  NENFEKYYRLQKLVTEDDFILLKQKLTEQLPTTFRITAS 50



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>PABS_STRGR (P32483) Para-aminobenzoate synthase (EC 6.3.5.8) (P-aminobenzoic|
           acid synthase) (PABA synthase)
          Length = 723

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +1

Query: 199 GALPPP-PAKEARATAGSPSPRRTWPSRLTTR 291
           G LPPP PA+E +AT G+P   R     L TR
Sbjct: 204 GTLPPPAPARETKATTGTPRRLRVIAKSLPTR 235



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>ICP34_HHV1N (P37319) Infected cell protein ICP34.5 (Neurovirulence factor|
           ICP34.5)
          Length = 245

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +1

Query: 196 PGALPPPPAKEARATAGSPSPRRTWP 273
           P + PP PA EAR TA +P PR   P
Sbjct: 77  PDSPPPEPAPEARPTAAAPRPRSPPP 102



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>ICP34_HHV1D (P37318) Infected cell protein ICP34.5 (Neurovirulence factor|
           ICP34.5)
          Length = 252

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +1

Query: 196 PGALPPPPAKEARATAGSPSPRRTWP 273
           P + PP PA EAR TA +P PR   P
Sbjct: 84  PDSPPPEPAPEARPTAAAPRPRSPPP 109



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>ICP34_HHV1F (P08353) Infected cell protein ICP34.5 (Neurovirulence factor|
           ICP34.5)
          Length = 263

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +1

Query: 196 PGALPPPPAKEARATAGSPSPRRTWP 273
           P + PP PA EAR TA +P PR   P
Sbjct: 83  PDSPPPEPAPEARPTAAAPRPRSPPP 108



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>RL1_HHV11 (O12396) Neurovirulence factor RL1 (Neurovirulence factor ICP34.5)|
          Length = 248

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +1

Query: 196 PGALPPPPAKEARATAGSPSPR 261
           P + PP PA EAR TA +P PR
Sbjct: 83  PDSPPPEPAPEARPTAAAPRPR 104



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>BARH1_DROAN (P22544) Homeobox protein B-H1 (Homeobox BarH1 protein)|
          Length = 606

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +1

Query: 208 PPPPAKEARATAGSPSP 258
           PPPP+  A AT GSPSP
Sbjct: 518 PPPPSSAAAATGGSPSP 534



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>CLC14_HUMAN (Q86T13) C-type lectin domain family 14 member A precursor|
           (Epidermal growth factor receptor 5) (EGFR-5)
          Length = 490

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +1

Query: 217 PAKEARATAGSPSPRRTWPSRL 282
           P +   ATA SP P+RTWP R+
Sbjct: 302 PTRRPPATATSPVPQRTWPIRV 323



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>EDS5_ARATH (Q945F0) Enhanced disease susceptibility 5 (Eds5) (Salicylic acid|
           induction deficient 1) (Sid1)
          Length = 543

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -2

Query: 323 IPLFLRNNLLPLVVSLEGQVLRGEGLPAVA 234
           IP F+  + LP+ VSLEG +L G  L  V+
Sbjct: 445 IPFFMALSALPMTVSLEGTLLAGRDLKFVS 474



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>NIFJ_ANASP (Q06879) Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)|
          Length = 1199

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = -3

Query: 259 VAKGCQPLPSPPSPAEA--GGRLGLSFQTFSRSCLK 158
           V K   P+PSP SP     GGR GLS + F+ + +K
Sbjct: 353 VNKNNSPVPSPQSPVPKIIGGRYGLSSKEFTPAMVK 388



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>DYR1B_MOUSE (Q9Z188) Dual specificity tyrosine-phosphorylation-regulated kinase|
           1B (EC 2.7.12.1)
          Length = 589

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = -3

Query: 280 ASKARFSVAKGCQPLPSPPSPAEAGGRLGL 191
           AS  R  +  G  PLP P  PA  G RLGL
Sbjct: 549 ASALRTRMTGGRPPLPPPDDPATLGPRLGL 578



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>GCYA2_HUMAN (P33402) Guanylate cyclase soluble subunit alpha-2 (EC 4.6.1.2)|
           (GCS-alpha-2)
          Length = 732

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +1

Query: 196 PGALPPPPAKEARATAGSPSPRRTWPSRLTTRGSKLFLRK 315
           PG L P PA  A A A +P+P  +  +   T G++   R+
Sbjct: 43  PGPLEPSPAAAAAAAAPAPTPAASAAAAAATAGARRVQRR 82



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>CHEB3_PSEU2 (Q4ZQV7) Chemotaxis response regulator protein-glutamate|
           methylesterase 3 (EC 3.1.1.61)
          Length = 386

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 202 ALPPPPAKEARATAGSPSPRRTWPSRLTT 288
           A P P    +RA+A +P+P R  PSR  T
Sbjct: 147 AAPAPSTLSSRASAPAPAPARAVPSRTAT 175


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,655,072
Number of Sequences: 219361
Number of extensions: 1116363
Number of successful extensions: 5743
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5704
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3638905326
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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