Clone Name | bastl25b08 |
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Clone Library Name | barley_pub |
>NCL1_YEAST (P38205) Putative methyltransferase NCL1 (EC 2.1.1.-)| Length = 684 Score = 45.8 bits (107), Expect = 6e-05 Identities = 24/70 (34%), Positives = 33/70 (47%) Frame = +3 Query: 171 RENVWKDNPRRPPASAGEGGEGNGWQPFATENLAFEAYYKGQQIVPEEEWDAFMSMLRKP 350 R+N K N + A + N W EN +E YYK + PE++W+ F + P Sbjct: 4 RKNFKKGNKKTFGARDDSRAQKN-WSELVKENEKWEKYYKTLALFPEDQWEEFKKTCQAP 62 Query: 351 LPAAFRINAS 380 LP FRI S Sbjct: 63 LPLTFRITGS 72
>YLH4_SCHPO (Q9HGQ2) Hypothetical protein C17D4.04 in chromosome I| Length = 654 Score = 33.5 bits (75), Expect = 0.33 Identities = 16/39 (41%), Positives = 23/39 (58%) Frame = +3 Query: 264 NLAFEAYYKGQQIVPEEEWDAFMSMLRKPLPAAFRINAS 380 N FE YY+ Q++V E+++ L + LP FRI AS Sbjct: 12 NENFEKYYRLQKLVTEDDFILLKQKLTEQLPTTFRITAS 50
>PABS_STRGR (P32483) Para-aminobenzoate synthase (EC 6.3.5.8) (P-aminobenzoic| acid synthase) (PABA synthase) Length = 723 Score = 31.6 bits (70), Expect = 1.3 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = +1 Query: 199 GALPPP-PAKEARATAGSPSPRRTWPSRLTTR 291 G LPPP PA+E +AT G+P R L TR Sbjct: 204 GTLPPPAPARETKATTGTPRRLRVIAKSLPTR 235
>ICP34_HHV1N (P37319) Infected cell protein ICP34.5 (Neurovirulence factor| ICP34.5) Length = 245 Score = 31.2 bits (69), Expect = 1.7 Identities = 14/26 (53%), Positives = 16/26 (61%) Frame = +1 Query: 196 PGALPPPPAKEARATAGSPSPRRTWP 273 P + PP PA EAR TA +P PR P Sbjct: 77 PDSPPPEPAPEARPTAAAPRPRSPPP 102
>ICP34_HHV1D (P37318) Infected cell protein ICP34.5 (Neurovirulence factor| ICP34.5) Length = 252 Score = 31.2 bits (69), Expect = 1.7 Identities = 14/26 (53%), Positives = 16/26 (61%) Frame = +1 Query: 196 PGALPPPPAKEARATAGSPSPRRTWP 273 P + PP PA EAR TA +P PR P Sbjct: 84 PDSPPPEPAPEARPTAAAPRPRSPPP 109
>ICP34_HHV1F (P08353) Infected cell protein ICP34.5 (Neurovirulence factor| ICP34.5) Length = 263 Score = 31.2 bits (69), Expect = 1.7 Identities = 14/26 (53%), Positives = 16/26 (61%) Frame = +1 Query: 196 PGALPPPPAKEARATAGSPSPRRTWP 273 P + PP PA EAR TA +P PR P Sbjct: 83 PDSPPPEPAPEARPTAAAPRPRSPPP 108
>RL1_HHV11 (O12396) Neurovirulence factor RL1 (Neurovirulence factor ICP34.5)| Length = 248 Score = 30.8 bits (68), Expect = 2.2 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +1 Query: 196 PGALPPPPAKEARATAGSPSPR 261 P + PP PA EAR TA +P PR Sbjct: 83 PDSPPPEPAPEARPTAAAPRPR 104
>BARH1_DROAN (P22544) Homeobox protein B-H1 (Homeobox BarH1 protein)| Length = 606 Score = 30.8 bits (68), Expect = 2.2 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +1 Query: 208 PPPPAKEARATAGSPSP 258 PPPP+ A AT GSPSP Sbjct: 518 PPPPSSAAAATGGSPSP 534
>CLC14_HUMAN (Q86T13) C-type lectin domain family 14 member A precursor| (Epidermal growth factor receptor 5) (EGFR-5) Length = 490 Score = 30.0 bits (66), Expect = 3.7 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = +1 Query: 217 PAKEARATAGSPSPRRTWPSRL 282 P + ATA SP P+RTWP R+ Sbjct: 302 PTRRPPATATSPVPQRTWPIRV 323
>EDS5_ARATH (Q945F0) Enhanced disease susceptibility 5 (Eds5) (Salicylic acid| induction deficient 1) (Sid1) Length = 543 Score = 29.6 bits (65), Expect = 4.8 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = -2 Query: 323 IPLFLRNNLLPLVVSLEGQVLRGEGLPAVA 234 IP F+ + LP+ VSLEG +L G L V+ Sbjct: 445 IPFFMALSALPMTVSLEGTLLAGRDLKFVS 474
>NIFJ_ANASP (Q06879) Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)| Length = 1199 Score = 29.3 bits (64), Expect = 6.3 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%) Frame = -3 Query: 259 VAKGCQPLPSPPSPAEA--GGRLGLSFQTFSRSCLK 158 V K P+PSP SP GGR GLS + F+ + +K Sbjct: 353 VNKNNSPVPSPQSPVPKIIGGRYGLSSKEFTPAMVK 388
>DYR1B_MOUSE (Q9Z188) Dual specificity tyrosine-phosphorylation-regulated kinase| 1B (EC 2.7.12.1) Length = 589 Score = 29.3 bits (64), Expect = 6.3 Identities = 15/30 (50%), Positives = 16/30 (53%) Frame = -3 Query: 280 ASKARFSVAKGCQPLPSPPSPAEAGGRLGL 191 AS R + G PLP P PA G RLGL Sbjct: 549 ASALRTRMTGGRPPLPPPDDPATLGPRLGL 578
>GCYA2_HUMAN (P33402) Guanylate cyclase soluble subunit alpha-2 (EC 4.6.1.2)| (GCS-alpha-2) Length = 732 Score = 29.3 bits (64), Expect = 6.3 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = +1 Query: 196 PGALPPPPAKEARATAGSPSPRRTWPSRLTTRGSKLFLRK 315 PG L P PA A A A +P+P + + T G++ R+ Sbjct: 43 PGPLEPSPAAAAAAAAPAPTPAASAAAAAATAGARRVQRR 82
>CHEB3_PSEU2 (Q4ZQV7) Chemotaxis response regulator protein-glutamate| methylesterase 3 (EC 3.1.1.61) Length = 386 Score = 28.9 bits (63), Expect = 8.2 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +1 Query: 202 ALPPPPAKEARATAGSPSPRRTWPSRLTT 288 A P P +RA+A +P+P R PSR T Sbjct: 147 AAPAPSTLSSRASAPAPAPARAVPSRTAT 175 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,655,072 Number of Sequences: 219361 Number of extensions: 1116363 Number of successful extensions: 5743 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 4970 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5704 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3638905326 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)