ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl25b07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_467429.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3201 Score = 353 bits (178), Expect = 3e-94 Identities = 277/309 (89%), Gaps = 1/309 (0%) Strand = Plus / Plus Query: 167 gcggtggcgagcatcgacctgggctccgagtggctcaaggtcgcggccgtgcacctcgcg 226 ||||||||||||||||||||||| || |||||||||||||| || |||||||||||||| Sbjct: 235 gcggtggcgagcatcgacctggggtcggagtggctcaaggtggccgccgtgcacctcgcc 294 Query: 227 ccgggccgcgccccgatcgccgtcgccatcaacgagatgtccaagcgcaagtcccccgcg 286 || || |||| ||||||||| || ||||||||||||||||| |||||||||||||| ||| Sbjct: 295 cccggacgcgtcccgatcgcggtggccatcaacgagatgtcgaagcgcaagtccccggcg 354 Query: 287 ctcgccgcgctggccgacggcaaccgcctcgccggcgaggaggcggccggcatcaccgcg 346 ||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 355 ctcgccgcgctcgccgacggcaaccggctcgccggcgaggaggcgtccggcatcaccgcg 414 Query: 347 cgccacccggccaaggtcttctcccgcatgcgcgacctcctcgccaagcccttcccctac 406 ||||||||| ||||||| ||| ||||| ||| ||||||||||| ||||||||||||||| Sbjct: 415 cgccacccgtccaaggtgttcgcccgcgcgcgggacctcctcgcgaagcccttcccctac 474 Query: 407 gcgcgggccctcgccgactcgctcttcct-ccctacgacctcgtccaggacgcgcgcggc 465 | |||| || |||| || |||||||||| |||||||||||||||| |||||||||||| Sbjct: 475 gtgcggtccgtcgcggaggcgctcttcctcccctacgacctcgtccccgacgcgcgcggc 534 Query: 466 gccgncgcg 474 |||| |||| Sbjct: 535 gccgccgcg 543
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 353 bits (178), Expect = 3e-94 Identities = 277/309 (89%), Gaps = 1/309 (0%) Strand = Plus / Plus Query: 167 gcggtggcgagcatcgacctgggctccgagtggctcaaggtcgcggccgtgcacctcgcg 226 ||||||||||||||||||||||| || |||||||||||||| || |||||||||||||| Sbjct: 29470665 gcggtggcgagcatcgacctggggtcggagtggctcaaggtggccgccgtgcacctcgcc 29470724 Query: 227 ccgggccgcgccccgatcgccgtcgccatcaacgagatgtccaagcgcaagtcccccgcg 286 || || |||| ||||||||| || ||||||||||||||||| |||||||||||||| ||| Sbjct: 29470725 cccggacgcgtcccgatcgcggtggccatcaacgagatgtcgaagcgcaagtccccggcg 29470784 Query: 287 ctcgccgcgctggccgacggcaaccgcctcgccggcgaggaggcggccggcatcaccgcg 346 ||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 29470785 ctcgccgcgctcgccgacggcaaccggctcgccggcgaggaggcgtccggcatcaccgcg 29470844 Query: 347 cgccacccggccaaggtcttctcccgcatgcgcgacctcctcgccaagcccttcccctac 406 ||||||||| ||||||| ||| ||||| ||| ||||||||||| ||||||||||||||| Sbjct: 29470845 cgccacccgtccaaggtgttcgcccgcgcgcgggacctcctcgcgaagcccttcccctac 29470904 Query: 407 gcgcgggccctcgccgactcgctcttcct-ccctacgacctcgtccaggacgcgcgcggc 465 | |||| || |||| || |||||||||| |||||||||||||||| |||||||||||| Sbjct: 29470905 gtgcggtccgtcgcggaggcgctcttcctcccctacgacctcgtccccgacgcgcgcggc 29470964 Query: 466 gccgncgcg 474 |||| |||| Sbjct: 29470965 gccgccgcg 29470973
>dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1038_A06 Length = 147836 Score = 353 bits (178), Expect = 3e-94 Identities = 277/309 (89%), Gaps = 1/309 (0%) Strand = Plus / Plus Query: 167 gcggtggcgagcatcgacctgggctccgagtggctcaaggtcgcggccgtgcacctcgcg 226 ||||||||||||||||||||||| || |||||||||||||| || |||||||||||||| Sbjct: 65695 gcggtggcgagcatcgacctggggtcggagtggctcaaggtggccgccgtgcacctcgcc 65754 Query: 227 ccgggccgcgccccgatcgccgtcgccatcaacgagatgtccaagcgcaagtcccccgcg 286 || || |||| ||||||||| || ||||||||||||||||| |||||||||||||| ||| Sbjct: 65755 cccggacgcgtcccgatcgcggtggccatcaacgagatgtcgaagcgcaagtccccggcg 65814 Query: 287 ctcgccgcgctggccgacggcaaccgcctcgccggcgaggaggcggccggcatcaccgcg 346 ||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 65815 ctcgccgcgctcgccgacggcaaccggctcgccggcgaggaggcgtccggcatcaccgcg 65874 Query: 347 cgccacccggccaaggtcttctcccgcatgcgcgacctcctcgccaagcccttcccctac 406 ||||||||| ||||||| ||| ||||| ||| ||||||||||| ||||||||||||||| Sbjct: 65875 cgccacccgtccaaggtgttcgcccgcgcgcgggacctcctcgcgaagcccttcccctac 65934 Query: 407 gcgcgggccctcgccgactcgctcttcct-ccctacgacctcgtccaggacgcgcgcggc 465 | |||| || |||| || |||||||||| |||||||||||||||| |||||||||||| Sbjct: 65935 gtgcggtccgtcgcggaggcgctcttcctcccctacgacctcgtccccgacgcgcgcggc 65994 Query: 466 gccgncgcg 474 |||| |||| Sbjct: 65995 gccgccgcg 66003
>dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1311_H06 Length = 139868 Score = 353 bits (178), Expect = 3e-94 Identities = 277/309 (89%), Gaps = 1/309 (0%) Strand = Plus / Plus Query: 167 gcggtggcgagcatcgacctgggctccgagtggctcaaggtcgcggccgtgcacctcgcg 226 ||||||||||||||||||||||| || |||||||||||||| || |||||||||||||| Sbjct: 121537 gcggtggcgagcatcgacctggggtcggagtggctcaaggtggccgccgtgcacctcgcc 121596 Query: 227 ccgggccgcgccccgatcgccgtcgccatcaacgagatgtccaagcgcaagtcccccgcg 286 || || |||| ||||||||| || ||||||||||||||||| |||||||||||||| ||| Sbjct: 121597 cccggacgcgtcccgatcgcggtggccatcaacgagatgtcgaagcgcaagtccccggcg 121656 Query: 287 ctcgccgcgctggccgacggcaaccgcctcgccggcgaggaggcggccggcatcaccgcg 346 ||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 121657 ctcgccgcgctcgccgacggcaaccggctcgccggcgaggaggcgtccggcatcaccgcg 121716 Query: 347 cgccacccggccaaggtcttctcccgcatgcgcgacctcctcgccaagcccttcccctac 406 ||||||||| ||||||| ||| ||||| ||| ||||||||||| ||||||||||||||| Sbjct: 121717 cgccacccgtccaaggtgttcgcccgcgcgcgggacctcctcgcgaagcccttcccctac 121776 Query: 407 gcgcgggccctcgccgactcgctcttcct-ccctacgacctcgtccaggacgcgcgcggc 465 | |||| || |||| || |||||||||| |||||||||||||||| |||||||||||| Sbjct: 121777 gtgcggtccgtcgcggaggcgctcttcctcccctacgacctcgtccccgacgcgcgcggc 121836 Query: 466 gccgncgcg 474 |||| |||| Sbjct: 121837 gccgccgcg 121845
>dbj|AK100997.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146N12, full insert sequence Length = 3201 Score = 353 bits (178), Expect = 3e-94 Identities = 277/309 (89%), Gaps = 1/309 (0%) Strand = Plus / Plus Query: 167 gcggtggcgagcatcgacctgggctccgagtggctcaaggtcgcggccgtgcacctcgcg 226 ||||||||||||||||||||||| || |||||||||||||| || |||||||||||||| Sbjct: 235 gcggtggcgagcatcgacctggggtcggagtggctcaaggtggccgccgtgcacctcgcc 294 Query: 227 ccgggccgcgccccgatcgccgtcgccatcaacgagatgtccaagcgcaagtcccccgcg 286 || || |||| ||||||||| || ||||||||||||||||| |||||||||||||| ||| Sbjct: 295 cccggacgcgtcccgatcgcggtggccatcaacgagatgtcgaagcgcaagtccccggcg 354 Query: 287 ctcgccgcgctggccgacggcaaccgcctcgccggcgaggaggcggccggcatcaccgcg 346 ||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 355 ctcgccgcgctcgccgacggcaaccggctcgccggcgaggaggcgtccggcatcaccgcg 414 Query: 347 cgccacccggccaaggtcttctcccgcatgcgcgacctcctcgccaagcccttcccctac 406 ||||||||| ||||||| ||| ||||| ||| ||||||||||| ||||||||||||||| Sbjct: 415 cgccacccgtccaaggtgttcgcccgcgcgcgggacctcctcgcgaagcccttcccctac 474 Query: 407 gcgcgggccctcgccgactcgctcttcct-ccctacgacctcgtccaggacgcgcgcggc 465 | |||| || |||| || |||||||||| |||||||||||||||| |||||||||||| Sbjct: 475 gtgcggtccgtcgcggaggcgctcttcctcccctacgacctcgtccccgacgcgcgcggc 534 Query: 466 gccgncgcg 474 |||| |||| Sbjct: 535 gccgccgcg 543
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 124 cgccctcgtcgcggcggccgtggccg 149 |||||||||||||||||||||||||| Sbjct: 23156 cgccctcgtcgcggcggccgtggccg 23131
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 329 gcggccggcatcaccgcgcgcca 351 ||||||||||||||||||||||| Sbjct: 4951458 gcggccggcatcaccgcgcgcca 4951436
>gb|AE004715.1| Pseudomonas aeruginosa PAO1, section 276 of 529 of the complete genome Length = 10189 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 139 ggccgtggccgtgccgccggcgagcgccgcg 169 |||| |||||| ||||||||||||||||||| Sbjct: 8570 ggccatggccgcgccgccggcgagcgccgcg 8540
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 133 cgcggcggccgtggccgtgccgccggcgagcgccg 167 |||||||||||||||| |||||| ||| ||||||| Sbjct: 1961565 cgcggcggccgtggccctgccgctggccagcgccg 1961599
>ref|NM_188531.1| Oryza sativa (japonica cultivar-group), Ozsa8200 predicted mRNA Length = 1122 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 133 cgcggcggccgtggccgtgccgccgg 158 ||||||||| |||||||||||||||| Sbjct: 270 cgcggcggcggtggccgtgccgccgg 295
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 282 ccgcgctcgccgcgctggccgacggc 307 ||||||||||||||||| |||||||| Sbjct: 2884535 ccgcgctcgccgcgctgcccgacggc 2884560 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 cggcgagcgccgcggtggcg 175 |||||||||||||||||||| Sbjct: 3241233 cggcgagcgccgcggtggcg 3241214 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 148 cgtgccgccggcgagcgccgcggtggcg 175 |||||||| |||| |||||||||||||| Sbjct: 28102 cgtgccgctggcgggcgccgcggtggcg 28129
>ref|XM_472588.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1281 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 126 ccctcgtcgcggcggccgtggc 147 |||||||||||||||||||||| Sbjct: 712 ccctcgtcgcggcggccgtggc 691
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 343 cgcgcgccacccggccaaggtcttctcccgcatg 376 ||||||||| |||| |||||| |||||||||||| Sbjct: 1284686 cgcgcgccatccggacaaggtgttctcccgcatg 1284719 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 287 ctcgccgcgctggccgacggcaaccgcctcgccg 320 ||||||||||||||| |||||| |||||| |||| Sbjct: 351092 ctcgccgcgctggcccacggcatccgcctggccg 351059
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 288 tcgccgcgctggccgacggcaa 309 |||||||||||||||||||||| Sbjct: 4490242 tcgccgcgctggccgacggcaa 4490221
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 126 ccctcgtcgcggcggccgtggc 147 |||||||||||||||||||||| Sbjct: 21755213 ccctcgtcgcggcggccgtggc 21755192
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 133 cgcggcggccgtggccgtgccgccgg 158 ||||||||| |||||||||||||||| Sbjct: 6813360 cgcggcggcggtggccgtgccgccgg 6813385 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 120 tcctcgccctcgtcgcggcggccgt 144 |||||||||||| |||||||||||| Sbjct: 19055464 tcctcgccctcgccgcggcggccgt 19055488 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 cggcaaccgcctcgccggcg 323 |||||||||||||||||||| Sbjct: 7081663 cggcaaccgcctcgccggcg 7081682
>gb|AE004776.1| Pseudomonas aeruginosa PAO1, section 337 of 529 of the complete genome Length = 11673 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 282 ccgcgctcgccgcgctggccga 303 |||||||||||||||||||||| Sbjct: 5763 ccgcgctcgccgcgctggccga 5742
>gb|AF546141.1| Streptomyces ghanaensis UnbL (unbL), UnbV (unbV), UnbU (unbU), PksE (pksE), and TebC (tebC) genes, complete cds Length = 10371 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 444 cctcgtccaggacgcgcgcggcgccg 469 |||||||||||||| ||||||||||| Sbjct: 7443 cctcgtccaggacgggcgcggcgccg 7468
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 133 cgcggcggccgtggccgtgccgccgg 158 ||||||||| |||||||||||||||| Sbjct: 165512 cgcggcggcggtggccgtgccgccgg 165537
>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0417G05 Length = 147803 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 133 cgcggcggccgtggccgtgccgccgg 158 ||||||||| |||||||||||||||| Sbjct: 95421 cgcggcggcggtggccgtgccgccgg 95446
>dbj|AK121647.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058N21, full insert sequence Length = 1800 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 126 ccctcgtcgcggcggccgtggc 147 |||||||||||||||||||||| Sbjct: 1112 ccctcgtcgcggcggccgtggc 1091
>dbj|AK106517.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-B02, full insert sequence Length = 1817 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 133 cgcggcggccgtggccgtgccgccgg 158 ||||||||| |||||||||||||||| Sbjct: 642 cgcggcggcggtggccgtgccgccgg 667
>dbj|AK101054.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033015K21, full insert sequence Length = 1560 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 133 cgcggcggccgtggccgtgccgccgg 158 ||||||||| |||||||||||||||| Sbjct: 408 cgcggcggcggtggccgtgccgccgg 433
>emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006B20, complete sequence Length = 141915 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 126 ccctcgtcgcggcggccgtggc 147 |||||||||||||||||||||| Sbjct: 66830 ccctcgtcgcggcggccgtggc 66809
>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome Length = 4222334 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 gcggccgtggccgtgccgccg 157 ||||||||||||||||||||| Sbjct: 569278 gcggccgtggccgtgccgccg 569298
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 ccgcgctcgccgcgctggccg 302 ||||||||||||||||||||| Sbjct: 2943634 ccgcgctcgccgcgctggccg 2943614 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 gcgctcgccgcgctggccgac 304 ||||||||||||||||||||| Sbjct: 2856828 gcgctcgccgcgctggccgac 2856808
>ref|NM_193176.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1437 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 120 tcctcgccctcgtcgcggcggccgt 144 |||||||||||| |||||||||||| Sbjct: 44 tcctcgccctcgccgcggcggccgt 68
>gb|AE017356.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 14, complete sequence Length = 762694 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 gtggcgagcatcgacctgggc 190 ||||||||||||||||||||| Sbjct: 551153 gtggcgagcatcgacctgggc 551173
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0097K08 map C827S, complete sequence Length = 137870 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 309 accgcctcgccggcgaggaggcggc 333 ||||||||| ||||||||||||||| Sbjct: 43657 accgcctcggcggcgaggaggcggc 43681
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0026P08 map near C827S, complete sequence Length = 148676 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 309 accgcctcgccggcgaggaggcggc 333 ||||||||| ||||||||||||||| Sbjct: 52118 accgcctcggcggcgaggaggcggc 52094
>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome Length = 4222645 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 gcggccgtggccgtgccgccg 157 ||||||||||||||||||||| Sbjct: 569094 gcggccgtggccgtgccgccg 569114
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 ggaggcggccggcatcaccgc 345 ||||||||||||||||||||| Sbjct: 1624218 ggaggcggccggcatcaccgc 1624238 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 tgccgccggcgagcgccgcgg 170 ||||||||||||||||||||| Sbjct: 479867 tgccgccggcgagcgccgcgg 479847
>gb|DQ013294.1| Polyangium cellulosum strain So ce12 disorazole biosynthesis gene cluster, complete sequence Length = 84868 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 cccgcgctcgccgcgctggccgacg 305 |||||||||||||||||| |||||| Sbjct: 83527 cccgcgctcgccgcgctgcccgacg 83551
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 tcgccgcgctggccgacggca 308 ||||||||||||||||||||| Sbjct: 769362 tcgccgcgctggccgacggca 769382
>emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genome; segment 11/16 Length = 349635 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 tcgccgcgctggccgacggca 308 ||||||||||||||||||||| Sbjct: 199733 tcgccgcgctggccgacggca 199713
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 ggaggcggccggcatcaccgc 345 ||||||||||||||||||||| Sbjct: 2959550 ggaggcggccggcatcaccgc 2959570 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 tgccgccggcgagcgccgcgg 170 ||||||||||||||||||||| Sbjct: 1799257 tgccgccggcgagcgccgcgg 1799237
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 277 gtcccccgcgctcgccgcgctggcc 301 |||| |||||||||||||||||||| Sbjct: 58323 gtcctccgcgctcgccgcgctggcc 58299
>gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequence Length = 505334 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 304 cggcaaccgcctcgccggcga 324 ||||||||||||||||||||| Sbjct: 430241 cggcaaccgcctcgccggcga 430261
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 154 gccggcgagcgccgcggtggcgagc 178 |||||||||||||||| |||||||| Sbjct: 557157 gccggcgagcgccgcgatggcgagc 557181 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 tcgccgtcgccatcaacgag 262 |||||||||||||||||||| Sbjct: 2342704 tcgccgtcgccatcaacgag 2342723
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 tgccgccggcgagcgccgcgg 170 ||||||||||||||||||||| Sbjct: 984780 tgccgccggcgagcgccgcgg 984800
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 309 accgcctcgccggcgaggaggcggc 333 ||||||||| ||||||||||||||| Sbjct: 7138898 accgcctcggcggcgaggaggcggc 7138874
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 ctcctgctcctcgccctcgtc 133 ||||||||||||||||||||| Sbjct: 26574931 ctcctgctcctcgccctcgtc 26574911 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 gcggcggccgtggccgtgccgccg 157 |||||||||| ||||||||||||| Sbjct: 6965044 gcggcggccggggccgtgccgccg 6965021
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 123 tcgccctcgtcgcggcggccgtggc 147 |||||||||||||||||||| |||| Sbjct: 565159 tcgccctcgtcgcggcggccctggc 565183
>dbj|AP003350.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0702H08 Length = 166899 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 120 tcctcgccctcgtcgcggcggccgt 144 |||||||||||| |||||||||||| Sbjct: 20881 tcctcgccctcgccgcggcggccgt 20905
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 cgccctcgtcgcggcggccgt 144 ||||||||||||||||||||| Sbjct: 3862737 cgccctcgtcgcggcggccgt 3862717 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 gtcccccgcgctcgccgcgct 297 ||||||||||||||||||||| Sbjct: 2182727 gtcccccgcgctcgccgcgct 2182707 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 tgccgccggcgagcgccgcg 169 |||||||||||||||||||| Sbjct: 8742906 tgccgccggcgagcgccgcg 8742887 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 cggcgagcgccgcggtggcg 175 |||||||||||||||||||| Sbjct: 2682573 cggcgagcgccgcggtggcg 2682554
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 322 cgaggaggcggccggcatcac 342 ||||||||||||||||||||| Sbjct: 782531 cgaggaggcggccggcatcac 782511 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgcgctcgccgcgctggccg 302 |||||||||||||||||||| Sbjct: 4644587 cgcgctcgccgcgctggccg 4644568 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 gcctcgccggcgaggaggcg 331 |||||||||||||||||||| Sbjct: 3628239 gcctcgccggcgaggaggcg 3628220 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gcgctcgccgcgctggccga 303 |||||||||||||||||||| Sbjct: 3595630 gcgctcgccgcgctggccga 3595649 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 cacctcgcgccgggccgcgc 237 |||||||||||||||||||| Sbjct: 3037224 cacctcgcgccgggccgcgc 3037243
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 ccgcgctcgccgcgctggccg 302 ||||||||||||||||||||| Sbjct: 2355652 ccgcgctcgccgcgctggccg 2355632 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgcgctcgccgcgctggccg 302 |||||||||||||||||||| Sbjct: 2066856 cgcgctcgccgcgctggccg 2066837 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 gcggcggccgtggccgtgccgccg 157 ||||| |||||||||||||||||| Sbjct: 1803008 gcggccgccgtggccgtgccgccg 1802985
>dbj|AP003712.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0460H04 Length = 166490 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 ctcctgctcctcgccctcgtc 133 ||||||||||||||||||||| Sbjct: 108584 ctcctgctcctcgccctcgtc 108564
>dbj|AK109762.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-G11, full insert sequence Length = 1040 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 ctcctgctcctcgccctcgtc 133 ||||||||||||||||||||| Sbjct: 39 ctcctgctcctcgccctcgtc 59
>dbj|AK101002.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023147G07, full insert sequence Length = 1933 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 120 tcctcgccctcgtcgcggcggccgt 144 |||||||||||| |||||||||||| Sbjct: 120 tcctcgccctcgccgcggcggccgt 144
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 ggaggcggccggcatcaccgc 345 ||||||||||||||||||||| Sbjct: 2783868 ggaggcggccggcatcaccgc 2783888
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 146 gccgtgccgccggcgagcgccgcgg 170 ||||||||||| ||||||||||||| Sbjct: 3699970 gccgtgccgcccgcgagcgccgcgg 3699946 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 tcgtcgcggcggccgtggcc 148 |||||||||||||||||||| Sbjct: 3358835 tcgtcgcggcggccgtggcc 3358854
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 309 accgcctcgccggcgaggaggcggc 333 ||||||||| ||||||||||||||| Sbjct: 7204869 accgcctcggcggcgaggaggcggc 7204845
>emb|AJ874112.1| Polyangium cellulosum disA gene, disB gene, disC gene, disD gene, ORF1, ORF2, ORF3, ORF4, ORF5, ORF6, ORF7, ORF8, ORF9, ORF10, ORF11, ORF12, ORF13, ORF14, ORF15, ORF16, ORF17, ORF18 and ORF19 Length = 86080 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 cccgcgctcgccgcgctggccgacg 305 |||||||||||||||||| |||||| Sbjct: 83444 cccgcgctcgccgcgctgcccgacg 83468
>ref|XM_476056.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3354 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 cggcaaccgcctcgccggcg 323 |||||||||||||||||||| Sbjct: 2235 cggcaaccgcctcgccggcg 2254
>ref|NM_188585.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3408 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 cggcaaccgcctcgccggcg 323 |||||||||||||||||||| Sbjct: 837 cggcaaccgcctcgccggcg 856
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cgcgctcgccgcgctggccg 302 |||||||||||||||||||| Sbjct: 1146119 cgcgctcgccgcgctggccg 1146138
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 cctcgccctcgtcgcggcgg 140 |||||||||||||||||||| Sbjct: 2226303 cctcgccctcgtcgcggcgg 2226322
>ref|XM_481192.1| Oryza sativa (japonica cultivar-group), mRNA Length = 582 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcgcggcggccgtggccgtg 151 |||||||||||||||||||| Sbjct: 44 tcgcggcggccgtggccgtg 63
>ref|XM_479735.1| Oryza sativa (japonica cultivar-group), mRNA Length = 750 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 tcgccgcgctggccgacggcaacc 311 ||||||||||||||| |||||||| Sbjct: 101 tcgccgcgctggccgccggcaacc 124
>ref|NM_197567.1| Oryza sativa (japonica cultivar-group) putative chloroplast nucleoid DNA binding protein (OSJNBa0025B05.4), mRNA Length = 1218 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 cgccggcgaggaggcggccg 335 |||||||||||||||||||| Sbjct: 100 cgccggcgaggaggcggccg 81
>ref|XM_479336.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1614 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 133 cgcggcggccgtggccgtgccgccggcg 160 ||||||||||||||||||| || ||||| Sbjct: 39 cgcggcggccgtggccgtggcggcggcg 66
>ref|XM_477081.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3138 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 caaccgcctcgccggcgagg 326 |||||||||||||||||||| Sbjct: 1395 caaccgcctcgccggcgagg 1414
>gb|DQ149987.1| Streptomyces neyagawaensis concanamycin A biosynthetic gene cluster, complete sequence Length = 99892 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 gctcgccgcgctggccgacg 305 |||||||||||||||||||| Sbjct: 26177 gctcgccgcgctggccgacg 26196
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 282 ccgcgctcgccgcgctggccgacggcaa 309 ||||||||||||||| | |||||||||| Sbjct: 853115 ccgcgctcgccgcgccgcccgacggcaa 853088
>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10, complete sequence Length = 156772 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 cggcaaccgcctcgccggcg 323 |||||||||||||||||||| Sbjct: 42835 cggcaaccgcctcgccggcg 42854
>ref|XM_370324.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein (MG06821.4) partial mRNA Length = 1383 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 353 ccggccaaggtcttctcccgcatgcgcg 380 |||||||||| ||||| ||||||||||| Sbjct: 196 ccggccaaggccttcttccgcatgcgcg 223
>ref|XM_415543.1| PREDICTED: Gallus gallus similar to CDC26 subunit of anaphase promoting complex (LOC417269), mRNA Length = 931 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 317 gccggcgaggaggcggccggcatc 340 ||||||||||||||||| |||||| Sbjct: 286 gccggcgaggaggcggcgggcatc 309
>ref|NM_145952.2| Mus musculus TBC1D12: TBC1 domain family, member 12 (Tbc1d12), mRNA Length = 3961 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 cgtcgcggcggccgtggccg 149 |||||||||||||||||||| Sbjct: 69 cgtcgcggcggccgtggccg 88
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 282 ccgcgctcgccgcgctggccgacggcaa 309 ||||||||||||||| | |||||||||| Sbjct: 1869559 ccgcgctcgccgcgccgcccgacggcaa 1869532
>ref|NM_177454.2| Homo sapiens KIAA1946 (KIAA1946), mRNA Length = 3575 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 gcccgctcgctcgctccccc 98 |||||||||||||||||||| Sbjct: 31 gcccgctcgctcgctccccc 12
>gb|AC101775.10| Mus musculus chromosome 19, clone RP24-116B5, complete sequence Length = 167945 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 cgtcgcggcggccgtggccg 149 |||||||||||||||||||| Sbjct: 30055 cgtcgcggcggccgtggccg 30074
>ref|XM_001000978.1| PREDICTED: Mus musculus RIKEN cDNA D430039N05 gene (D430039N05Rik), mRNA Length = 5757 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 gcccgctcgctcgctccccc 98 |||||||||||||||||||| Sbjct: 250 gcccgctcgctcgctccccc 231
>ref|XM_922613.2| PREDICTED: Mus musculus similar to KIAA1946, transcript variant 2 (LOC634842), mRNA Length = 5674 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 gcccgctcgctcgctccccc 98 |||||||||||||||||||| Sbjct: 298 gcccgctcgctcgctccccc 279
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 cggcgagcgccgcggtggcg 175 |||||||||||||||||||| Sbjct: 2178243 cggcgagcgccgcggtggcg 2178224
>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome Length = 138390 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 ccgcgctcgccgcgctggccgacg 305 |||||||||||||||| ||||||| Sbjct: 54911 ccgcgctcgccgcgctcgccgacg 54934
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 gccgcgctggccgacggcaa 309 |||||||||||||||||||| Sbjct: 1113814 gccgcgctggccgacggcaa 1113833
>emb|Z78205.1|BHT1UL Bovine herpesvirus type 1 UL22-35 genes Length = 37000 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 ccgcgctcgccgcgctggccgacg 305 |||||||||||||||||| ||||| Sbjct: 22820 ccgcgctcgccgcgctgggcgacg 22843
>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome Length = 135301 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 ccgcgctcgccgcgctggccgacg 305 |||||||||||||||||| ||||| Sbjct: 53620 ccgcgctcgccgcgctgggcgacg 53643
>ref|XM_798078.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053505115.10) partial mRNA Length = 1683 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccacccggccaaggtcttct 368 |||||||||||||||||||| Sbjct: 811 ccacccggccaaggtcttct 792
>ref|XM_798889.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053505057.10) partial mRNA Length = 1683 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccacccggccaaggtcttct 368 |||||||||||||||||||| Sbjct: 811 ccacccggccaaggtcttct 792
>ref|XM_799469.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510837.30) partial mRNA Length = 1683 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ccacccggccaaggtcttct 368 |||||||||||||||||||| Sbjct: 811 ccacccggccaaggtcttct 792
>emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete chromosome; segment 3/12 Length = 300000 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 gccgccggcgagcgccgcgg 170 |||||||||||||||||||| Sbjct: 266584 gccgccggcgagcgccgcgg 266565
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cgcggcggccgtggccgtgc 152 |||||||||||||||||||| Sbjct: 724679 cgcggcggccgtggccgtgc 724660
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 aggcggccggcatcaccgcg 346 |||||||||||||||||||| Sbjct: 1478407 aggcggccggcatcaccgcg 1478426
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 156 cggcgagcgccgcggtggcgagca 179 ||||||||| |||||||||||||| Sbjct: 823583 cggcgagcggcgcggtggcgagca 823560
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16 Length = 348074 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgcgctcgccgcgctggccg 302 |||||||||||||||||||| Sbjct: 253039 cgcgctcgccgcgctggccg 253020
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16 Length = 348624 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 138 cggccgtggccgtgccgccggcgagcgccgcg 169 ||||||||||||||| || |||| |||||||| Sbjct: 90969 cggccgtggccgtgctgcaggcgcgcgccgcg 91000
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgcgctcgccgcgctggccg 302 |||||||||||||||||||| Sbjct: 197234 cgcgctcgccgcgctggccg 197215
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14 Length = 348866 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 138 cggccgtggccgtgccgccggcgagcgccgcg 169 ||||||||||||||| || |||| |||||||| Sbjct: 204004 cggccgtggccgtgctgcaggcgcgcgccgcg 204035
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12 Length = 349672 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cgcgctcgccgcgctggccg 302 |||||||||||||||||||| Sbjct: 213689 cgcgctcgccgcgctggccg 213708
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12 Length = 343243 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 138 cggccgtggccgtgccgccggcgagcgccgcg 169 ||||||||||||||| || |||| |||||||| Sbjct: 4535 cggccgtggccgtgctgcaggcgcgcgccgcg 4566
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 282 ccgcgctcgccgcgctggccgacggcaa 309 ||||||||||||||| | |||||||||| Sbjct: 2495364 ccgcgctcgccgcgccgcccgacggcaa 2495391
>gb|BC060872.1| Homo sapiens KIAA1946, mRNA (cDNA clone MGC:71825 IMAGE:30347998), complete cds Length = 3575 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 gcccgctcgctcgctccccc 98 |||||||||||||||||||| Sbjct: 31 gcccgctcgctcgctccccc 12
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 gcatcaccgcgcgccacccg 355 |||||||||||||||||||| Sbjct: 38394 gcatcaccgcgcgccacccg 38375
>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04, complete sequence Length = 136713 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 cggcaaccgcctcgccggcg 323 |||||||||||||||||||| Sbjct: 131050 cggcaaccgcctcgccggcg 131069
>gb|AC074196.14| Oryza sativa chromosome 10 BAC OSJNBa0040D23 genomic sequence, complete sequence Length = 134102 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 cgccggcgaggaggcggccg 335 |||||||||||||||||||| Sbjct: 133069 cgccggcgaggaggcggccg 133050
>gb|AC096782.6| Oryza sativa chromosome 10 BAC OSJNBa0025B05 genomic sequence, complete sequence Length = 14849 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 cgccggcgaggaggcggccg 335 |||||||||||||||||||| Sbjct: 11687 cgccggcgaggaggcggccg 11706
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 gccgcgctggccgacggcaa 309 |||||||||||||||||||| Sbjct: 3863632 gccgcgctggccgacggcaa 3863613
>gb|AE005848.1| Caulobacter crescentus CB15 section 174 of 359 of the complete genome Length = 12510 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gccctcgtcgcggcggccgt 144 |||||||||||||||||||| Sbjct: 432 gccctcgtcgcggcggccgt 451
>dbj|AK091423.1| Homo sapiens cDNA FLJ34104 fis, clone FCBBF3007860 Length = 3283 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 gcccgctcgctcgctccccc 98 |||||||||||||||||||| Sbjct: 31 gcccgctcgctcgctccccc 12
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 cctgctcctcgccctcgtcg 134 |||||||||||||||||||| Sbjct: 1010309 cctgctcctcgccctcgtcg 1010290
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 282 ccgcgctcgccgcgctggccgacggcaaccgc 313 ||||||||||||| | ||||||||||| |||| Sbjct: 653338 ccgcgctcgccgcacaggccgacggcacccgc 653307
>emb|BX934329.2| Gallus gallus finished cDNA, clone ChEST51j10 Length = 346 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 317 gccggcgaggaggcggccggcatc 340 ||||||||||||||||| |||||| Sbjct: 98 gccggcgaggaggcggcgggcatc 121
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 311 cgcctcgccggcgaggaggcggcc 334 |||| ||||||||||||||||||| Sbjct: 4002558 cgccgcgccggcgaggaggcggcc 4002535
>dbj|AK038899.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230073I09 product:NPD019 homolog [Homo sapiens], full insert sequence Length = 945 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 gcccgctcgctcgctccccc 98 |||||||||||||||||||| Sbjct: 34 gcccgctcgctcgctccccc 15
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 cgccggcgaggaggcggccg 335 |||||||||||||||||||| Sbjct: 20492921 cgccggcgaggaggcggccg 20492902
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcgcggcggccgtggccgtg 151 |||||||||||||||||||| Sbjct: 10501904 tcgcggcggccgtggccgtg 10501923 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 tcgccgcgctggccgacggcaacc 311 ||||||||||||||| |||||||| Sbjct: 551827 tcgccgcgctggccgccggcaacc 551804
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 133 cgcggcggccgtggccgtgccgccggcg 160 ||||||||||||||||||| || ||||| Sbjct: 26969900 cgcggcggccgtggccgtggcggcggcg 26969873 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 caaccgcctcgccggcgagg 326 |||||||||||||||||||| Sbjct: 5808456 caaccgcctcgccggcgagg 5808437
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 cggcaaccgcctcgccggcg 323 |||||||||||||||||||| Sbjct: 4156356 cggcaaccgcctcgccggcg 4156375
>gb|AC023162.41| Homo sapiens 3 BAC RP11-263I1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 95579 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 tctcccgtgctcccgccccg 20 |||||||||||||||||||| Sbjct: 33521 tctcccgtgctcccgccccg 33502
>gb|AC017101.10| Homo sapiens BAC clone RP11-556A11 from 2, complete sequence Length = 195635 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 gcccgctcgctcgctccccc 98 |||||||||||||||||||| Sbjct: 113070 gcccgctcgctcgctccccc 113051
>dbj|AK172979.1| Mus musculus mRNA for mKIAA0608 protein Length = 3947 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 cgtcgcggcggccgtggccg 149 |||||||||||||||||||| Sbjct: 69 cgtcgcggcggccgtggccg 88
>ref|XM_575160.1| PREDICTED: Rattus norvegicus similar to RIKEN cDNA D430039N05 gene (LOC499821), mRNA Length = 2649 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 gcccgctcgctcgctccccc 98 |||||||||||||||||||| Sbjct: 96 gcccgctcgctcgctccccc 77
>dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0452F10 Length = 145120 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 cggcaaccgcctcgccggcg 323 |||||||||||||||||||| Sbjct: 69243 cggcaaccgcctcgccggcg 69262
>dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1119_B04 Length = 151721 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 caaccgcctcgccggcgagg 326 |||||||||||||||||||| Sbjct: 115484 caaccgcctcgccggcgagg 115465
>dbj|AP003822.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1316_A04 Length = 87144 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 133 cgcggcggccgtggccgtgccgccggcg 160 ||||||||||||||||||| || ||||| Sbjct: 34378 cgcggcggccgtggccgtggcggcggcg 34351
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 ccggcgagcgccgcggtggc 174 |||||||||||||||||||| Sbjct: 481743 ccggcgagcgccgcggtggc 481724
>dbj|AP004785.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0061B07 Length = 124766 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 gcggcggccgtggccgtgccgccg 157 |||||||||| ||||||||||||| Sbjct: 24471 gcggcggccggggccgtgccgccg 24448
>dbj|AP005455.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0503D09 Length = 144443 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 133 cgcggcggccgtggccgtgccgccggcg 160 ||||||||||||||||||| || ||||| Sbjct: 118491 cgcggcggccgtggccgtggcggcggcg 118464
>gb|AE005029.1| Halobacterium sp. NRC-1 section 60 of 170 of the complete genome Length = 12664 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 ccgtggccgtgccgccggcg 160 |||||||||||||||||||| Sbjct: 6265 ccgtggccgtgccgccggcg 6284
>emb|X94677.1|BHV1ULGNS Bovine herpesvirus type 1 genes for UL[27,28,29,30,31] Length = 10500 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 ccgcgctcgccgcgctggccgacg 305 |||||||||||||||||| ||||| Sbjct: 8544 ccgcgctcgccgcgctgggcgacg 8567
>dbj|AP005163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0053M06 Length = 175416 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcgcggcggccgtggccgtg 151 |||||||||||||||||||| Sbjct: 124495 tcgcggcggccgtggccgtg 124514
>dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0007D08 Length = 183142 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 tcgccgcgctggccgacggcaacc 311 ||||||||||||||| |||||||| Sbjct: 141787 tcgccgcgctggccgccggcaacc 141764
>dbj|AK111823.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048C13, full insert sequence Length = 3430 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 caaccgcctcgccggcgagg 326 |||||||||||||||||||| Sbjct: 1182 caaccgcctcgccggcgagg 1201
>dbj|AP004130.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_B05 Length = 121853 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcgcggcggccgtggccgtg 151 |||||||||||||||||||| Sbjct: 21372 tcgcggcggccgtggccgtg 21391
>dbj|AK109468.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-C06, full insert sequence Length = 1654 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcgcggcggccgtggccgtg 151 |||||||||||||||||||| Sbjct: 780 tcgcggcggccgtggccgtg 799
>emb|AL929058.4| Zebrafish DNA sequence from clone DKEY-69H9 in linkage group 20, complete sequence Length = 106063 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 cccccgcgctcgccgcgctg 298 |||||||||||||||||||| Sbjct: 65761 cccccgcgctcgccgcgctg 65742
>emb|X86780.1|SHGCPIR S.hygroscopicus gene cluster for polyketide immunosuppressant rapamycin Length = 107379 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgcgctcgccgcgctggccg 302 |||||||||||||||||||| Sbjct: 5448 cgcgctcgccgcgctggccg 5429
>gb|AF043654.1|AF043654 Streptomyces lividans 1326 BxlS (bxlS), BxlR (bxlR), BxlE (bxlE), BxlF (bxlF), BxlG (bxlG), and BxlA (bxlA) genes, complete cds Length = 8616 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 cgccggcgagcgccgcggtg 172 |||||||||||||||||||| Sbjct: 7804 cgccggcgagcgccgcggtg 7785
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 gccgcgctggccgacggcaa 309 |||||||||||||||||||| Sbjct: 3864306 gccgcgctggccgacggcaa 3864287
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 gaggaggcggccggcatcac 342 |||||||||||||||||||| Sbjct: 1139724 gaggaggcggccggcatcac 1139743
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 cgccggcgaggaggcggccg 335 |||||||||||||||||||| Sbjct: 20504193 cgccggcgaggaggcggccg 20504174
>emb|AL772301.7| Mouse DNA sequence from clone RP23-111F12 on chromosome 2, complete sequence Length = 187665 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 gcccgctcgctcgctccccc 98 |||||||||||||||||||| Sbjct: 165328 gcccgctcgctcgctccccc 165309
>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29 Length = 303450 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 cgccggcgagcgccgcggtg 172 |||||||||||||||||||| Sbjct: 60242 cgccggcgagcgccgcggtg 60223
>emb|AL449213.4|HS344J2 Homo sapiens chromosome 3 sequence from BAC 344J2 map 3q21 region D3S3607-D3S1587, complete sequence Length = 98356 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 tctcccgtgctcccgccccg 20 |||||||||||||||||||| Sbjct: 71326 tctcccgtgctcccgccccg 71345 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,785,500 Number of Sequences: 3902068 Number of extensions: 2785500 Number of successful extensions: 85927 Number of sequences better than 10.0: 136 Number of HSP's better than 10.0 without gapping: 141 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 72115 Number of HSP's gapped (non-prelim): 13807 length of query: 474 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 452 effective length of database: 17,147,199,772 effective search space: 7750534296944 effective search space used: 7750534296944 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
