ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl25b05 |
|---|---|
| Clone Library Name | barley_pub |
>YNQA_CAEEL (Q21986) Hypothetical protein R13F6.10 in chromosome III| Length = 958 Score = 61.6 bits (148), Expect = 1e-09 Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 2/121 (1%) Frame = +1 Query: 115 ERRVRPIWDAVDSRQYKAALKLCTSLLAKHPTSPYALALKALTLERMRKPDEALTVCLNA 294 ERR+RPI+D++DS+Q+K AL C +L KHP + A LKALTL R+ K +A Sbjct: 10 ERRLRPIYDSLDSQQFKKALSDCDKVLKKHPNTSAAKVLKALTLIRLEK-------LADA 62 Query: 295 KELLYSNNI--FHFDDLTLSTLQIVFQRLERLDLATSCYEYACTKYPNNLELMMELFIAT 468 E+L + ++ H D+LTL ++ + + YE P+ L +LF+A Sbjct: 63 TEILEALDVPGAHHDELTLQAFVHCYRDSNQHMKVVTLYERIIQVDPSEHNL-TQLFMAY 121 Query: 469 S 471 S Sbjct: 122 S 122
>NARGL_HUMAN (Q6N069) NMDA receptor-regulated 1-like protein (NARG1-like| protein) Length = 864 Score = 35.8 bits (81), Expect = 0.067 Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 4/122 (3%) Frame = +1 Query: 148 DSRQYKAALKLCTSLLAKHPTSPYA--LALKALTLERMRKPDEALT-VCLNAKELLYSNN 318 + +QYK LK C +L+ + + LA+K LTL + K +EA V + + S+ Sbjct: 22 EQKQYKNGLKFCKMILSNPKFAEHGETLAMKGLTLNCLGKKEEAYEFVRKGLRNDVKSHV 81 Query: 319 IFHFDDLTLSTLQIVFQRLER-LDLATSCYEYACTKYPNNLELMMELFIATSEILICEAH 495 +H L QR ++ D A CY A +NL+++ +L + ++ E + Sbjct: 82 CWHVYGL--------LQRSDKKYDEAIKCYRNALKLDKDNLQILRDLSLLQIQMRDLEGY 133 Query: 496 RQ 501 R+ Sbjct: 134 RE 135
>NARG1_MOUSE (Q80UM3) NMDA receptor-regulated protein 1 (N-terminal| aceyltransferase 1) (Tubedown-1 protein) Length = 865 Score = 35.4 bits (80), Expect = 0.088 Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 4/122 (3%) Frame = +1 Query: 148 DSRQYKAALKLCTSLLAKHPTSPYA--LALKALTLERMRKPDEALTVCLNA-KELLYSNN 318 + +QY+ LK C +L+ + + LA+K LTL + K +EA + + L S+ Sbjct: 22 EHKQYRNGLKFCKQILSNPKFAEHGETLAMKGLTLNCLGKKEEAYELVRRGLRNDLKSHV 81 Query: 319 IFHFDDLTLSTLQIVFQRLER-LDLATSCYEYACTKYPNNLELMMELFIATSEILICEAH 495 +H L QR ++ D A CY A +NL+++ +L + ++ E + Sbjct: 82 CWHVYGL--------LQRSDKKYDEAIKCYRNALKWDKDNLQILRDLSLLQIQMRDLEGY 133 Query: 496 RQ 501 R+ Sbjct: 134 RE 135
>NARG1_PONPY (Q5R4J9) NMDA receptor-regulated protein 1| Length = 866 Score = 35.4 bits (80), Expect = 0.088 Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 4/122 (3%) Frame = +1 Query: 148 DSRQYKAALKLCTSLLAKHPTSPYA--LALKALTLERMRKPDEALTVCLNA-KELLYSNN 318 + +QY+ LK C +L+ + + LA+K LTL + K +EA + + L S+ Sbjct: 22 EHKQYRNGLKFCKQILSNPKFAEHGETLAMKGLTLNCLGKKEEAYELVRRGLRNDLKSHV 81 Query: 319 IFHFDDLTLSTLQIVFQRLER-LDLATSCYEYACTKYPNNLELMMELFIATSEILICEAH 495 +H L QR ++ D A CY A +NL+++ +L + ++ E + Sbjct: 82 CWHVYGL--------LQRSDKKYDEAIKCYRNALKWDKDNLQILRDLSLLQIQMRDLEGY 133 Query: 496 RQ 501 R+ Sbjct: 134 RE 135
>NARG1_HUMAN (Q9BXJ9) NMDA receptor-regulated protein 1 (N-terminal| acetyltransferase) (Tubedown-1 protein) (Tbdn100) (Gastric cancer antigen Ga19) Length = 866 Score = 35.4 bits (80), Expect = 0.088 Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 4/122 (3%) Frame = +1 Query: 148 DSRQYKAALKLCTSLLAKHPTSPYA--LALKALTLERMRKPDEALTVCLNA-KELLYSNN 318 + +QY+ LK C +L+ + + LA+K LTL + K +EA + + L S+ Sbjct: 22 EHKQYRNGLKFCKQILSNPKFAEHGETLAMKGLTLNCLGKKEEAYELVRRGLRNDLKSHV 81 Query: 319 IFHFDDLTLSTLQIVFQRLER-LDLATSCYEYACTKYPNNLELMMELFIATSEILICEAH 495 +H L QR ++ D A CY A +NL+++ +L + ++ E + Sbjct: 82 CWHVYGL--------LQRSDKKYDEAIKCYRNALKWDKDNLQILRDLSLLQIQMRDLEGY 133 Query: 496 RQ 501 R+ Sbjct: 134 RE 135
>NAT1_YEAST (P12945) N-terminal acetyltransferase 1 (EC 2.3.1.88)| (Amino-terminal, alpha-amino, acetyltransferase 1) Length = 853 Score = 33.5 bits (75), Expect = 0.33 Identities = 18/49 (36%), Positives = 29/49 (59%) Frame = +1 Query: 148 DSRQYKAALKLCTSLLAKHPTSPYALALKALTLERMRKPDEALTVCLNA 294 + +QYK +LKL ++L K + +LALK L L + + D+A + NA Sbjct: 31 EGKQYKKSLKLLDAILKKDGSHVDSLALKGLDLYSVGEKDDAASYVANA 79
>NARGL_MOUSE (Q9DBB4) NMDA receptor-regulated 1-like protein (NARG1-like| protein) Length = 864 Score = 33.1 bits (74), Expect = 0.44 Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 4/122 (3%) Frame = +1 Query: 148 DSRQYKAALKLCTSLLAKHPTSPYA--LALKALTLERMRKPDEALT-VCLNAKELLYSNN 318 + +QYK LK C +L+ + + LA+K L L + K +EA V + + S+ Sbjct: 22 EQKQYKNGLKFCKMILSNPKFAEHGETLAMKGLILNCLGKREEAYEFVRKGLRSDVRSHV 81 Query: 319 IFHFDDLTLSTLQIVFQRLER-LDLATSCYEYACTKYPNNLELMMELFIATSEILICEAH 495 +H L QR ++ D A CY A +NL+++ +L + ++ E + Sbjct: 82 CWHVYGL--------LQRSDKKYDEAIKCYRNALKLDKDNLQILRDLSLLQIQMRDLEGY 133 Query: 496 RQ 501 R+ Sbjct: 134 RE 135
>Y4667_PSEAE (P42810) Hypothetical protein PA4667| Length = 590 Score = 31.6 bits (70), Expect = 1.3 Identities = 24/82 (29%), Positives = 39/82 (47%) Frame = +1 Query: 190 LLAKHPTSPYALALKALTLERMRKPDEALTVCLNAKELLYSNNIFHFDDLTLSTLQIVFQ 369 LL K+P + L KAL L++ +PDEALT LL N+ + L + Q Sbjct: 194 LLKKYPNNGQLLFGKALLLQQDGRPDEALT-------LLEDNSASRHEVAPLLLRSRLLQ 246 Query: 370 RLERLDLATSCYEYACTKYPNN 435 ++R D A + ++P++ Sbjct: 247 SMKRSDEALPLLKAGIKEHPDD 268
>UTY_MOUSE (P79457) Ubiquitously transcribed Y chromosome tetratricopeptide| repeat protein (Ubiquitously transcribed TPR protein ON the Y chromosome) (Male-specific histocompatibility antigen H-YDB) Length = 1212 Score = 30.0 bits (66), Expect = 3.7 Identities = 14/41 (34%), Positives = 26/41 (63%) Frame = +1 Query: 232 KALTLERMRKPDEALTVCLNAKELLYSNNIFHFDDLTLSTL 354 K+LT + RK + +C+NAK+ +SN+I+ + +S+L Sbjct: 540 KSLTSKTSRKDRDTSNICVNAKK--HSNHIYQISSVPISSL 578
>CABIN_HUMAN (Q9Y6J0) Calcineurin-binding protein Cabin 1 (Calcineurin inhibitor)| (CAIN) Length = 2220 Score = 29.6 bits (65), Expect = 4.8 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Frame = -2 Query: 147 DGVPDRPHPPLRDSAGE-PELAGHVSGPSRSRVRVLSGGGVAGESGRRK 4 +G+P PPL D +G PE G V G R + G A +SG RK Sbjct: 1701 EGLPQPKKPPLADGSGPGPEPGGKV-GLLNHRPVAMDAGDSADQSGERK 1748
>EMIL1_MOUSE (Q99K41) EMILIN-1 precursor (Elastin microfibril interface-located| protein 1) (Elastin microfibril interfacer 1) Length = 1017 Score = 29.6 bits (65), Expect = 4.8 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 3/40 (7%) Frame = -3 Query: 158 CRESTASQIGRTRRSGIP---PASPNLLAMSAGPHDLGLG 48 C E AS +G + +P P PNL SAG H GLG Sbjct: 131 CGEGPASVLGPAPSTPLPRPRPVRPNLSGSSAGSHLSGLG 170
>NUP98_HUMAN (P52948) Nuclear pore complex protein Nup98-Nup96 precursor| [Contains: Nuclear pore complex protein Nup98 (Nucleoporin Nup98) (98 kDa nucleoporin); Nuclear pore complex protein Nup96 (Nucleoporin Nup96) (96 kDa nucleoporin)] Length = 1729 Score = 29.3 bits (64), Expect = 6.3 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = +1 Query: 211 SPYALALKALTLERMRKPDEALTVCLNAKELLYSNNIFHFDDL 339 SP+ + L+ L+L R RKPDE + + EL ++ H D+L Sbjct: 1192 SPFKVHLEKLSL-RQRKPDEDMKLYQTPLELKLKHSTVHVDEL 1233
>CDPK2_ORYSA (P53683) Calcium-dependent protein kinase, isoform 2 (EC| 2.7.11.1) (CDPK 2) Length = 533 Score = 29.3 bits (64), Expect = 6.3 Identities = 11/15 (73%), Positives = 12/15 (80%) Frame = +1 Query: 7 PPPALTRYTPAAQNP 51 PPPA RYTP+A NP Sbjct: 42 PPPAEVRYTPSAMNP 56
>TTC8_HUMAN (Q8TAM2) Tetratricopeptide repeat protein 8 (TPR repeat protein 8)| (Bardet-Biedl syndrome 8 protein) Length = 531 Score = 29.3 bits (64), Expect = 6.3 Identities = 16/45 (35%), Positives = 20/45 (44%) Frame = +1 Query: 136 WDAVDSRQYKAALKLCTSLLAKHPTSPYALALKALTLERMRKPDE 270 W R+++ LCT +L K P A LKA L M DE Sbjct: 12 WSYFRRRKFQLCADLCTQMLEKSPYDQAAWILKARALTEMVYIDE 56
>TBCD3_HUMAN (Q8IZP1) TBC1 domain family member 3 (Rab GTPase-activating protein| PRC17) (Prostate cancer gene 17 protein) (TRE17 alpha protein) Length = 549 Score = 28.9 bits (63), Expect = 8.2 Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 1/52 (1%) Frame = +1 Query: 4 LPPPALTRYTPAAQNPNPRS*GPADMASKFGLAG-GIPERRVRPIWDAVDSR 156 LPPPA +A P P S G + A G P R RPIW A R Sbjct: 357 LPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPR 408
>Y1380_NEIMA (P67535) UPF0250 protein NMA1380| Length = 91 Score = 28.9 bits (63), Expect = 8.2 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +3 Query: 180 LHLAPRQAPHLTLRPRSQGSYFG 248 LH QA H+T RP S+G+Y G Sbjct: 39 LHAPDTQAHHITTRPSSKGNYTG 61
>Y1218_NEIMB (P67536) UPF0250 protein NMB1218| Length = 91 Score = 28.9 bits (63), Expect = 8.2 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +3 Query: 180 LHLAPRQAPHLTLRPRSQGSYFG 248 LH QA H+T RP S+G+Y G Sbjct: 39 LHAPDTQAHHITTRPSSKGNYTG 61 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,412,162 Number of Sequences: 219361 Number of extensions: 1076811 Number of successful extensions: 3484 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 3373 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3481 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3638905326 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
