>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC|
           2.7.11.1)
          Length = 942

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
 Frame = +3

Query: 300 NYPP----SWNSGDPCGAPWDGIMCTNGRVTSLRPSSVNMQGTLSDSVGQLGEL 449
           +YPP    SW   DPC   W GI C+NG +T +    + + GT+S   G +  L
Sbjct: 336 DYPPRLAESWKGNDPC-TNWIGIACSNGNITVISLEKMELTGTISPEFGAIKSL 388



 Score = 37.4 bits (85), Expect = 0.018
 Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
 Frame = +3

Query: 261 DAAALRSLMGKWTNYPPS---WNSGDPCGAPWDGIMCTNG-RVTSLRPSSVNMQGTLSDS 428
           D +A+ SL  K +  PPS   W+  DPC   W  I+CT   RVT ++     +QGTLS  
Sbjct: 28  DLSAMLSL--KKSLNPPSSFGWSDPDPC--KWTHIVCTGTKRVTRIQIGHSGLQGTLSPD 83

Query: 429 VGQLGEL 449
           +  L EL
Sbjct: 84  LRNLSEL 90

>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)|
          Length = 1109

 Score = 37.4 bits (85), Expect = 0.018
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
 Frame = +3

Query: 261 DAAALRSLMGKWTNYPP----SWNSGDPCGAPWDGIMCTNGR-VTSLRPSSVNMQGTLSD 425
           D AAL SL   WT+ P     SWN+ D     W G+ C   + V +L  SS  + G    
Sbjct: 27  DGAALLSLTRHWTSIPSDITQSWNASDSTPCSWLGVECDRRQFVDTLNLSSYGISGEFGP 86

Query: 426 SVGQLGEL 449
            +  L  L
Sbjct: 87  EISHLKHL 94

>MURD_STRAW (Q82AD8) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC|
           6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
           synthetase) (D-glutamic acid-adding enzyme)
          Length = 467

 Score = 32.7 bits (73), Expect = 0.44
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +3

Query: 264 AAALRSLMGKWTNYPPSWNSGDPCGAPWDGIMCTNGRVTSLR--PSSVNMQGTLSDSVGQ 437
           AAA  + +  W +   +W    P  APW  +  TNG+ T+++   S +   G  + +VG 
Sbjct: 86  AAAAEAGVPVWGDVELAWRLRGPGSAPWLAVTGTNGKTTTVQMLASILTAAGLRTAAVGN 145

Query: 438 LG 443
           +G
Sbjct: 146 IG 147

>NORK_MEDTR (Q8L4H4) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does|
           not make infections protein 2) (Symbiosis receptor-like
           kinase) (MtSYMRK)
          Length = 925

 Score = 32.0 bits (71), Expect = 0.74
 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
 Frame = +3

Query: 312 SWNSGDPCGA-PWDGIMCTNGR----VTSLRPSSVNMQGTLSDSVGQLGEL 449
           SW SGDPC   PW GI C +      +T L  SS N++G +   V ++  L
Sbjct: 384 SW-SGDPCMIFPWKGITCDDSTGSSIITKLDLSSNNLKGAIPSIVTKMTNL 433

>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor|
           (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS
           MICROSPOROCYTES1 protein)
          Length = 1192

 Score = 31.6 bits (70), Expect = 0.97
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +3

Query: 312 SWN-SGDPCGAPWDGIMCTNGRVTSLRPSSVNMQGTLSDSVGQLGEL 449
           SWN S       W G+ C  GRV SL   S++++G +   +  L  L
Sbjct: 45  SWNVSSSASHCDWVGVTCLLGRVNSLSLPSLSLRGQIPKEISSLKNL 91

>RUMB_HAEIN (P44083) 23S rRNA (uracil-5-)-methyltransferase rumB (EC 2.1.1.-)|
           (23S rRNA(M-5-U747)-methyltransferase)
          Length = 392

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +3

Query: 231 PAGLCQTNPDDAAALRSLMGKWTNYPPSWNSGDP-CGAPWDGIMC 362
           P G  QTNP  AA L +   +W    P +N  D  CG    G+ C
Sbjct: 213 PRGFFQTNPKVAAGLYATAQQWVAEFPIYNLWDLFCGVGGFGLHC 257

>PCSK5_BRACL (Q9NJ15) Proprotein convertase subtilisin/kexin type 5 precursor|
           (EC 3.4.21.-) (Proprotein convertase PC6-like) (aPC6)
          Length = 1696

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +3

Query: 18  PHTHRRRELPADDQRSQPGRQTTHKAQEARRCSPSGA 128
           PHT + RE P D++  + G       Q  R C  S A
Sbjct: 649 PHTPQTREEPTDEEECEDGDYYDRSKQRCRHCHDSCA 685

>TRPB_MYCTU (P66984) Tryptophan synthase beta chain (EC 4.2.1.20)|
          Length = 422

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 78  VDLAGSSGRRPEALVVCVCGGQKS 7
           V + G +GR P+A+V CV GG  +
Sbjct: 240 VQIQGQAGRLPDAVVACVGGGSNA 263

>TRPB_MYCBO (P66985) Tryptophan synthase beta chain (EC 4.2.1.20)|
          Length = 422

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 78  VDLAGSSGRRPEALVVCVCGGQKS 7
           V + G +GR P+A+V CV GG  +
Sbjct: 240 VQIQGQAGRLPDAVVACVGGGSNA 263


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,567,863
Number of Sequences: 219361
Number of extensions: 886633
Number of successful extensions: 3284
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3281
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)